BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G56145.2
Length=3280
Score E
Sequences producing significant alignments: (Bits) Value
Ahg914753 jgi|Araly1|914753|Al_scaffold_0001_5007 3825 0.0
Ahg924153 jgi|Araly1|924153|scaffold_105434.1 1074 0.0
Ahg924152 jgi|Araly1|924152|scaffold_105433.1 732 0.0
Ahg924151 jgi|Araly1|924151|scaffold_105432.1 472 1e-131
> Ahg914753 jgi|Araly1|914753|Al_scaffold_0001_5007
Length=6009
Score = 3825 bits (2071), Expect = 0.0
Identities = 2241/2324 (96%), Gaps = 8/2324 (0%)
Strand=Plus/Plus
Query 85 ATGCTGAGATTAATTCTCTCCTTGGTAGTTTGGTTTGTGTTCATGTCTGGTTTATTTCAT 144
|||| |||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||
Sbjct 1 ATGCCGAGATTAATTCTCTCCTTCGTACTTTGGTTTGTGCTCATGTCTGGTTTATTTCAT 60
Query 145 GTGGTTCGATCACAGAACCGAACCACTGCCACTACTGATCCTGACGAAGCTCGGGCGTTG 204
|||||| || ||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 61 GTGGTTAGACCACAGAACCGAACCAGAGCCACTACTGATCCTGACGAAGCTCGGGCGTTG 120
Query 205 AACAAGATATTCAGGACGTGGAAGATAACGGCGACGAAAGCATGGAACATAAGCGGCGAA 264
||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 AACAACATCTTCAGGGCGTGGAAGATAACGGCGACGAAAGCATGGAACATAAGCGGCGAA 180
Query 265 CTATGCAGCGGAGCCGCCATAGACGACAGTGTCAGCATCGACAATTTAGCTTTCAATCCT 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 CTATGCAGCGGAGCCGCCATAGACGACAGTGTCAGCATCGACAATTTAGCTTTCAATCCT 240
Query 325 CTCATCAAATGCGACTGCTCTTTTGTCGATTCCACTATCTGCCGCATCGTTGCTCTGAGA 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 CTCATCAAATGCGACTGCTCTTTTGTCGATTCCACTATCTGCCGCATCGTTGCTCTGAGA 300
Query 385 GCTCGTGGTATGGATGTTGCTGGACCGATTCCTGATGATCTCTGGACTCTTGTTTACATC 444
|||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||
Sbjct 301 GCTCGTGGTATGGATGTTGCTGGACCAATTCCTGAAGACCTCTGGACTCTTGTTTACATC 360
Query 445 TCTAATCTGAACCTAAATCAGAATTTCTTGACTGGTCCTCTGTCTCCTGGCATTGGAAAT 504
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 TCAAATCTGAACCTAAATCAGAATTTCTTGACTGGTCCTCTGTCTCCTGGCATTGGAAAT 420
Query 505 CTCACTCGAATGCAGTGGATGACTTTTGGGGCCAATGCATTGTCCGGACCAGTTCCCAAA 564
|| | ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct 421 CTGAATCGAATGCAGTGGATGACTTTTGGGGCTAATGCATTGTCTGGACCAGTTCCCAAA 480
Query 565 GAAATTGGACTGCTTACTGATTTAAGATCATTAGCGATTGATATGAATAATTTCTCCGGT 624
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 481 GAAATTGGTCTGCTTACTGATTTAAGATCATTAGCGATTGATATGAATAATTTCTCCGGT 540
Query 625 TCTCTACCACCTGAGATTGGAAATTGCACGAGGCTAGTGAAAATGTACATTGGAAGTTCA 684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 541 TCTCTACCACCTGAGATTGGAAATTGCACGAGGCTAGTGAAAATGTACATTGGAAGTTCA 600
Query 685 GGACTTAGTGGTGAAATTCCTTCATCGTTTGCTAATTTTGTGAACTTGGAAGAAGCTTGG 744
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct 601 GGACTTAGTGGTGAAATTCCTTCATCATTTGCTAATTTTGTGAACTTGGAAGAAGCCTGG 660
Query 745 ATCAATGATATCCGACTTACAGGTCAGATACCAGACTTTATAGGAAATTGGACAAAACTT 804
|| |||||||||| |||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct 661 ATTAATGATATCCAACTTACAGGTCAGATACCAGACTTCATAGGAAATTGGACCAAACTT 720
Query 805 ACTAC-CTTGAGAATTCTGGGGACTAGTTTGAGTGGTCCAATTCCATCTACATTTGCGAA 863
||||| || ||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct 721 ACTACTCT-GAGAATTCTGGGGACTAATTTGAGTGGTCCAATTCCATCTACATTTGTGAA 779
Query 864 CTTAATCTCATTGACAGAATTGAGATTAGGTGAAATAAGTAATATCAGTTCTTCTCTTCA 923
|||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct 780 CTTAATTTCATTGACAGAATTGAGACTAGGTGAAATAAGTAATATCAATTCTTCTCTTCA 839
Query 924 ATTCATCCGAGAAATGAAATCTATAAGTGTCCTAGTATTAAGGAACAATAATCTCACAGG 983
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 840 ATTCATCCGAGAAATGAAATCTATAAGTGTCCTAGTATTAAGGAACAATAATCTCACAGG 899
Query 984 CACAATACCTTCCAATATTGGAGATTACTTGGGGCTACGACAACTTGATTTGAGTTTCAA 1043
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 900 CACAATACCTTCCAATATTGGAGATTACTTGTGGCTACGACAACTTGATTTGAGTTTCAA 959
Query 1044 CAAGCTAACTGGGCAAATTCCAGCTCCGCTTTTCAACTCAAGACAGCTTACTCACTTGTT 1103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 960 CAAGCTAACTGGGCAAATTCCAGCTCCGCTTTTCAACTCAAGACAGCTTACTCACTTGTT 1019
Query 1104 TCTTGGAAATAACAGGCTGAATGGTTCCTTACCCACTCAAAAGAGTCCCTCTCTTAGCAA 1163
|||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1020 TCTTGGAAATAACAAGCTGAATGGTTCCTTACCCACTCAAAAAAGTCCCTCTCTTAGCAA 1079
Query 1164 TATAGATGTGTCATACAATGATTTAACAGGGGATCTTCCTTCTTGGGTTCGCCTACCAAA 1223
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1080 TATAGATGTGTCATACAATGATTTAGCAGGGGATCTTCCTTCTTGGGTTCGCCTACCAAA 1139
Query 1224 CTTGCAACTTAACCTGATTGCCAACCACTTTACCGTGGGAGGTTCTAACAGAAGGGCTTT 1283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1140 CTTGCAACTTAACCTGATTGCCAACCACTTTACCGTGGGAGGTTCTAACAGAAGGGCTTT 1199
Query 1284 ACCCCG-ACTGGACTGCCTCCAGAAGGATTTCCGCTGCAATCGAGGAAAAGGAGTATATT 1342
|| || |||||| |||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct 1200 -CCGCGGACTGGATTGCCTCCAGAAGAATTTCCGCTGCAATCGAGGGAAAGGAGTATATT 1258
Query 1343 TCAACTTTTTCGTCAATTGTGGAGGCCGGGATATCAGGTCTAGTAGTGGAGCTTTGTATG 1402
||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1259 TCAACTTTTTCATCAATTGTGGAGGCCCGGATATCAGGTCTAGTAGTGGAGCTTTGTATG 1318
Query 1403 AAAAGGACGAGGGGGCACTTGGACCAGCTACTTTTTTCGTAAGTAAAACGCAGAGATGGG 1462
||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||
Sbjct 1319 AAAAGGACGAGGGCGCACTTGGACCAGCTACATTTTTCGTAAGTAAAATGCAGAGATGGG 1378
Query 1463 CAGTCAGCAATGTAGGACTATTTACTGGGAGTAACAGTAATCAATACATAGCTCTTTCGG 1522
||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||
Sbjct 1379 CAGTCAGCAATGTAGGACTATTTACTGGGAGTAACAGCAATCAATACATATTTGTTTCGC 1438
Query 1523 CAACGCAATTTGCAAACACGTCAGACTCAGAGCTTTTCCAATCAGCGAGACTCTCTGCAT 1582
| || | |||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1439 CTACACGATTTGCAAACACTTCAGACTCAGAGCTTTTCCAATCAGCGAGACTCTCTGCAT 1498
Query 1583 CTTCTTTAAGGTATTACGGACTGGGGCTAGAAAATGGAGGCTATAGTGTAACGGTTCAGT 1642
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1499 CTTCTTTAAGGTATTACGGACTGGGGCTAGAAAATGGAGGCTATAGTGTAACAGTTCAGT 1558
Query 1643 TTGCTGAGATACAAATACAAGGTTCTAATACCTGGAAAAGTCTTGGAAGGCGAATTTTCG 1702
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1559 TTGCTGAGATACAAATACAAGGTTCTAATACCTGGAAAAGTCTTGGAAGGCGAGTTTTCG 1618
Query 1703 ACATATATGTCCAGGGAAAACTTGTTGAGAAGGATTTTGACATGCAAA-AAGCTGCTAAC 1761
|||||||||||||||||||||||||||| ||||||||||||||||| | || ||||||||
Sbjct 1619 ACATATATGTCCAGGGAAAACTTGTTGAAAAGGATTTTGACATGCACAGAA-CTGCTAAC 1677
Query 1762 GGTTCTAGTATCCGAGTTATTCAAAGAGTCTATAAAGCAAATGTATCAGAAAATTACCTT 1821
||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1678 GGTTCTAGTATCCCCGTAATTCAAAGAGTCTATAAAGCAAATGTATCTGAAAATTACCTT 1737
Query 1822 GA-AGTTCATCTTTTCTGGGCTGGAAAAGGGACCTGCTGTATTCCTGCTCAAGGCACTTA 1880
|| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1738 GAGA-TTCATCTTTTCTGGGCTGGAAAAGGGACCTGCTGTATTCCTGCTCAAGGCACTTA 1796
Query 1881 TGGGCCATTAGTCTCAGCTATCAGTGCAACTCCAGATTTCATACCTACTGTAAAAAATAA 1940
|||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1797 TGGGCCGTTAGTCTCAGCGATCAGTGCAACTCCAGATTTCATACCTACTGTAAAAAATAA 1856
Query 1941 GTTGCCCTCGAAATCCAAGAAAAACATTGTTATCATTGTAGGGGCTATTGTAGGAGCAGG 2000
|||||||||||||||||||||||| |||| |||||| |||||||| |||||||| |||||
Sbjct 1857 GTTGCCCTCGAAATCCAAGAAAAAAATTGGTATCATCGTAGGGGCCATTGTAGGGGCAGG 1916
Query 2001 GATGTTATGTATATTGGTGATTGCTATCCTCTTATTCATCCGTAGGAAAAGAAAAAGGGC 2060
|||||| |||| ||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct 1917 AATGTTAAGTATCTTGGTGATTGCTATCATCTTATTCATCCGTAGGAAAAGGAAAAGGGC 1976
Query 2061 GGCTGATGAAGAAGTGCTAAACAGTCTGCACATAAGGCCCTACACCTTTAGTTACTCAGA 2120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1977 GGCTGATGAAGAAGTGCTAAACAGTCTGCACATAAGGCCCTACACCTTTAGTTACTCAGA 2036
Query 2121 ACTCAGAACTGCAACTCAAGATTTTGATCCTTCCAACAAGCTTGGGGAGGGAGGATTTGG 2180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2037 ACTCAGAACTGCAACTCAAGATTTTGATCCTTCCAACAAGCTTGGGGAGGGAGGATTTGG 2096
Query 2181 ACCTGTTTTTAAGGGAAAACTGAACGACGGAAGAGAGATAGCCGTGAAGCAATTGTCAGT 2240
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2097 ACCTGTTTTTAAGGGAAAACTGAACGACGGAAGAGAGATAGCTGTGAAGCAATTGTCAGT 2156
Query 2241 TGCATCCAGGCAAGGAAAGGGTCAATTTGTTGCGGAGATTGCCACTATATCAGCTGTTCA 2300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2157 TGCATCCAGGCAAGGAAAGGGTCAATTTGTTGCGGAGATTGCCACTATATCAGCTGTTCA 2216
Query 2301 GCATCGCAACCTTGTAAAATTGTATGGATGCTGCATTGAGGGAAATCAGCGCATGCTTGT 2360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2217 GCATCGCAACCTTGTAAAATTGTATGGATGCTGCATTGAGGGAAATCAGCGCATGCTTGT 2276
Query 2361 ATATGAATACCTCTCAAACAAGAGTCTAGATCAAGCTCTATTCG 2404
||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2277 ATATGAATACCTCTCAAACAACAGTCTAGATCAAGCTCTATTCG 2320
Score = 1175 bits (636), Expect = 0.0
Identities = 691/718 (96%), Gaps = 2/718 (0%)
Strand=Plus/Plus
Query 2485 GAGGAAAAGAGTTTGCAGCTTGGTTGGTCACAGCGTTTCGAGATATGCTTGGGAGTAGCA 2544
||||||||||||||||||||||| |||||| | |||||||||||||||||||||||||||
Sbjct 2320 GAGGAAAAGAGTTTGCAGCTTGGCTGGTCAGACCGTTTCGAGATATGCTTGGGAGTAGCA 2379
Query 2545 AAAGGTTTAGCATATATGCATGAGGAGTCAAATCCCCGTATAGTGCATAGGGATGTGAAG 2604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2380 AAAGGTTTAGCATATATGCATGAGGAGTCAAATCCCCGTATAGTGCATAGGGATGTGAAG 2439
Query 2605 GCAAGCAATATTCTTCTGGACTCGGATCTGGTCCCGAAACTCTCAGATTTTGGGTTGGCC 2664
|||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||
Sbjct 2440 GCAAGCAATATTCTGCTGGACTCGGATCTGGTCCCAAAACTCTCTGATTTTGGGTTGGCC 2499
Query 2665 AAACTATATGATGATAAGAAGACCCACATAAGTACCCGAGTTGCAGGGACGATCGGATAT 2724
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2500 AAACTATATGATGATAAGAAGACGCACATAAGTACCCGAGTTGCAGGGACGATCGGATAT 2559
Query 2725 CTGTCACCAGAGTACGTGATGCTTGGACATCTTACGGAGAAGACGGATGTGTTTGCCTTT 2784
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2560 CTGTCACCAGAGTACGTGATGTTTGGACATCTTACGGAGAAGACGGATGTGTTTGCCTTT 2619
Query 2785 GGTATAGTGGC-CTTGGAAATTGTCAGCGGAAGGCCTAACTCCTCTCCAGAATTAGATGA 2843
||||||||||| || |||| |||||||||||||||||||||||||||||||||| |||||
Sbjct 2620 GGTATAGTGGCTCT-GGAAGTTGTCAGCGGAAGGCCTAACTCCTCTCCAGAATTGGATGA 2678
Query 2844 TGACAAACAATACCTTCTCGAATGGGCATGGAGCCTACACCAAGAGCAGCGTGATATGGA 2903
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct 2679 TGACAAACAATACCTTCTCGAATGGGCATGGAGCCTACACCAAGAGAAGCGTGATTTGGA 2738
Query 2904 AGTAGTAGATCCGGATCTGACAGAATTTGACAAGGAAGAAGTGAAACGTGTAATAGGAGT 2963
|||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2739 AGTAGTGGATCCGGATCTAACAGAATTTGACAAGGAAGAAGTGAAACGTGTAATAGGAGT 2798
Query 2964 AGCGTTCTTGTGCACACAAACAGATCATGCAATACGACCAACTATGTCCCGAGTGGTAGG 3023
||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct 2799 AGCTTTCTTGTGCACACAAACAGATCATGCAATACGGCCAACTATGTCCCGTGTGGTAGG 2858
Query 3024 TATGTTGACCGGTGATGTGGAGATAACGGAAGCCAATGCCAAGCCAGGGTACGTCTCTGA 3083
|||| ||||||| ||||||||| |||| ||||||||||| |||||||| |||||||||||
Sbjct 2859 TATGCTGACCGGCGATGTGGAGGTAACCGAAGCCAATGCGAAGCCAGGCTACGTCTCTGA 2918
Query 3084 GAGAACATTTGAGAATGCAATGAGCTTCATGAGTGGTTCAACGAGCTCGAGCTGGATATT 3143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2919 GAGAACATTTGAGAATGCAATGAGCTTCATGAGTGGTTCAACGAGCTCGAGCTGGATATT 2978
Query 3144 GCCTGAAACTCCAAAAGATTCTTCCAAGTCCCAAGTTGAAGAACATGGACGACGACAT 3201
||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct 2979 GCCTGAAACTCCAAAGGATTCTTCCAAGTCCCAAGTTGAAGAACGTGGACGACGACAT 3036
Score = 292 bits (158), Expect = 8e-78
Identities = 577/770 (75%), Gaps = 66/770 (9%)
Strand=Plus/Plus
Query 145 GTGGTTCGATCACAGAACCGAACCACT-GCCACTACTGATCCTGACGAAGCTCGGGCGTT 203
||||||||| | || || |||||| | ||||| || |||| |||||||| || || ||
Sbjct 3109 GTGGTTCGAGCCCAAAATCGAACC-GTAGCCACCACACATCCCGACGAAGCGCGAGCTTT 3167
Query 204 GAAC-AAGATATTCAG-GACGTGGAAGATAAC-GGCGACGAAAGCATGGAACATAAGCGG 260
|||| | || ||| | | | |||| ||| | |||| ||| | ||||||||| |||||
Sbjct 3168 GAACTCA-ATTTTC-GCGGCTTGGAGGAT-TCGGGCGCCGAGGGAATGGAACATCAGCGG 3224
Query 261 CGAACTATGCAGCGGAGCCGCCATAGACGAC-AGTGT-C-AGCA-TCGACAA-TTTAGCT 315
|||||| ||| ||| |||||||| |||| | ||||| | || | || | || | ||
Sbjct 3225 CGAACTTTGCTCCGGCGCCGCCATCGACG-CAAGTGTCCAAG-ACTC-A-AACCCT-GCC 3279
Query 316 TTCAATCCTCTCATCAAATGCGACTGCT-CTTTTGTCGATTCCACTATCTGCCGCA-T-C 372
| ||||||||| ||||||||||| || | ||| | | ||||| |||||||||| | |
Sbjct 3280 TACAATCCTCTAATCAAATGCGATTG-TAGTTTCGAAAACTCCACAATCTGCCGCATTAC 3338
Query 373 GTTGC-TCTGAGAGCTCGTG-GTATGGATGTTGCT-GGACCGATTCCTGATGATCTCTGG 429
| || || | | || | ||||| |||| | ||||| || ||| | | ||||||
Sbjct 3339 -CAACATC-AAG-GTTTATGCG-ATGGAAGTTG-TAGGACCTATACCTCAACAGCTCTGG 3393
Query 430 ACTCTT-GTTTACATCTCTAATCTGAACCTAAATCAGAAT-TTCTTGACTGGTC-CTCTG 486
||| || | ||| || | ||||||||| | ||| ||| ||| | ||||| | | ||
Sbjct 3394 ACT-TTGGAATACCTCACAAATCTGAACTTGGGTCAAAATGTTC-TCACTGG-CTCACTA 3450
Query 487 TCTCCTGGC-ATTGGAAATCTCACTCGAATGCAGTGGATGACTTTTGGGGCCAATGCATT 545
| ||| || ||||||||| | ||||||||||| ||||||||||||||| |||||| ||
Sbjct 3451 CCGCCT-GCAATTGGAAATTTGACTCGAATGCAATGGATGACTTTTGGGATCAATGCGTT 3509
Query 546 GTCCGGACCAGTTCCCAAAGAAATTGGACTGCTTACTGATTTAAGATCA-TTAGCGATTG 604
||| || || ||||| |||||||| || ||||||| |||||| || | |||| |||
Sbjct 3510 GTCTGGCCCTGTTCCTAAAGAAATCGGTTTGCTTACAAATTTAAAATTACTTAG-TATT- 3567
Query 605 A-TAT-GAATAA-TTTCTCCGGTTCTCTACCACCTGAGATT-GGAAATTGCACGAGGCTA 660
| | | ||||| ||| ||||||||| ||||| ||||||| ||| | || || | |||
Sbjct 3568 AGT-TCAAATAACTTT-TCCGGTTCTATACCAGATGAGATTGGGAGA-TGTACAAAACTA 3624
Query 661 GTGAA-A-ATGTACATTGGA-AGTTCAGGACTTAGTGGTGA-AATTCCT-TCATCGTTTG 715
|| | || |||||| || ||||| || || || || || ||| ||| | ||| ||||
Sbjct 3625 --CAACAGATATACATT-GATAGTTCGGGTCTCAGCGG-GAGAATACCTGT-ATCATTTG 3679
Query 716 CTAATTTTGT-GAACTTGGAAGAAGCTTGGATCAATGATATCCG-ACTTACAGGTCAGAT 773
||||| |||| || | ||||| |||||||||| ||||| | |||||||||||||||
Sbjct 3680 CTAATCTTGTGGAGC-TGGAACAAGCTTGGATTGCGGATAT-GGAACTTACAGGTCAGAT 3737
Query 774 ACCAGACTTTATAGGAAATTGGACAAAACTTACTACCTTGAGAATTCTGGGGACTAGTTT 833
|||||||||||||||| ||||||| || |||||||||||||||||||| || ||| ||||
Sbjct 3738 ACCAGACTTTATAGGAGATTGGACCAATCTTACTACCTTGAGAATTCTCGGAACTGGTTT 3797
Query 834 GAGTGGTCCAATTCCATC-TACATTTGCGAACTTAATCT-CATTGACAGA 881
||||||||||| || | | | ||| | ||||||| || | ||||||||
Sbjct 3798 AAGTGGTCCAATACCGGCGT-CGTTTTCCAACTTAA-CTTCTTTGACAGA 3845
> Ahg924153 jgi|Araly1|924153|scaffold_105434.1
Length=3136
Score = 1074 bits (581), Expect = 0.0
Identities = 1760/2309 (76%), Gaps = 161/2309 (7%)
Strand=Plus/Plus
Query 140 TTCATGTGGTTCGATCACAGAACCGAACCACTGCCACTACTGATCCTGACGAAGCTCGGG 199
|||| ||||||||||| || |||| |||| ||||||||| |||| |||||||| || |
Sbjct 91 TTCACGTGGTTCGATCTCAAAACCAAACCGGAGCCACTACTCATCCCGACGAAGCGCGAG 150
Query 200 CGTTGAACAAGATATTCAG-GACGTGGAAGATAAC-GGCGACGAAAGCATGGAACATAAG 257
| ||||| || ||| | | | |||||||| | |||| ||| || ||||||||| ||
Sbjct 151 CTTTGAATTCCATCTTC-GCGGCTTGGAAGAT-CCGGGCGCCGAGAGAATGGAACATCAG 208
Query 258 CGGCGAACTATGCAGCGGAGCCGCCATAGACGACAGTGT-C-AGCATCGAC-AA-TTTAG 313
||||||||| ||| ||| |||||||| |||| |||||| | || | | || || | |
Sbjct 209 CGGCGAACTTTGCTCCGGCGCCGCCATCGACGCCAGTGTCCTAG-A-C-ACAAACCCT-G 264
Query 314 CTTTCAATCCTCTCATCAAATGCGACTGCT--CTTTTGTCGATTCCACTATCTGCCGCAT 371
| | ||||||||| ||||||||||| || | | || | | ||||| |||||||||||
Sbjct 265 CCTACAATCCTCTAATCAAATGCGATTG-TAGC-TTCGAAAACTCCACAATCTGCCGCAT 322
Query 372 C-GTTGC-TCTGAGAG-CT-CGTGGTATGGATGTTGCT-GGACCGATTCCTGATGATCTC 426
| | | || || | | | |||| ||||||| | ||||| || ||| | || |||
Sbjct 323 CACTAACATC-AAG-GTTTATGCGGTA--GATGTTG-TAGGACCTATACCTCAAGAGCTC 377
Query 427 TGGACTCTTG-T-TTACATCTCTAATCTGAACCTAAATCAGAAT-TTCTTGACTGGTC-C 482
|||||| ||| | || | || | ||||||||| | ||| ||| ||| | ||||| | |
Sbjct 378 TGGACT-TTGATATT-CCTCACCAATCTGAACTTGGGTCAAAATATTC-TCACTGG-CTC 433
Query 483 TCTGTCTCCTGGC-ATTGGAAATCTCACTCGAATGCAGTGGATGACTTTTGGGGCCAATG 541
||| ||||| || ||||||||||| ||||||||||| ||||||||||||||| |||||
Sbjct 434 ACTGCCTCCT-GCAATTGGAAATCTGACTCGAATGCAATGGATGACTTTTGGGATCAATG 492
Query 542 CATTGTCCGGACCAGTTCCCAAAGAAATTGGACTGCTTACTGATTTAAGATCA-TTAGCG 600
| ||||| || || ||||| |||||||| || ||||||| |||||||||| | ||||
Sbjct 493 CGTTGTCTGGCCCTGTTCCTAAAGAAATCGGTTTGCTTACAGATTTAAGATTACTTAG-T 551
Query 601 ATTGA-TAT-GAATAA-TTTCTCCGGTTCTCTACCACCTGAGATTGGAAATTGCACGAGG 657
||| | | | ||||| ||| || |||||| ||||| |||||| |||||||| | |
Sbjct 552 ATT-AGT-TCAAATAACTTT-TCTGGTTCTATACCAGATGAGATCGGAAATTGTGCAAAA 608
Query 658 CTAGTGAAAATGTACATTGGA-AGTTCAGGACTTAGTGGTGA-AATTCCTTCATCGTTTG 715
||| | ||||||||| | || ||||| ||||| || || || ||| |||| ||| ||||
Sbjct 609 CTACAGCAAATGTACA-TAGATAGTTCTGGACTCAGCGG-GAGAATACCTTTATCATTTG 666
Query 716 CTAATTTTGT-GAACTTGGAAGAAGCTTGGATCA-ATGATATCCG-ACTTACAGGTCAGA 772
||||| | || || | ||||| |||||||||| | ||| | | | ||||||||||||
Sbjct 667 CTAATCTCGTGGAGC-TGGAACAAGCTTGGAT-AGCGGATCT-GGAAGTTACAGGTCAGA 723
Query 773 TACCAGACTTTATAGGAAATTGGACAAAACTTACTACCTTGAGAATTCTGGGGACTAGTT 832
||||||||||||||||| |||||| ||||||||||||||||||||||| || ||| |||
Sbjct 724 TACCAGACTTTATAGGATCTTGGACCAAACTTACTACCTTGAGAATTCTCGGAACTGGTT 783
Query 833 TGAGTGGTCCAATTCCATC-TACATTTGCGAACTTAATCT-CATTGACAGAATTGAGA-T 889
|||||||||| || || || | ||||| | ||||| | || | ||||||||| |||| |
Sbjct 784 TGAGTGGTCCGATACCGTCGT-CATTTTCCAACTTGA-CTTCCTTGACAGAACTGAGGCT 841
Query 890 TAGGTGAAATAAGTAATATCAGTTCTTCTCTTCAATTCATCCGAGAAATGAAATCTATAA 949
| ||||| ||| ||| || ||||||||| | |||||| ||| ||||||||| |||
Sbjct 842 T-GGTGATATATCCAATGGAAGCTCTTCTCTTGATTTCATCAAAGACATGAAATCTCTAA 900
Query 950 GTGTCCTAGTATTAAGGAACAATAATCTCACAGGCACAATACCTTCCAATATTGGAG-AT 1008
|||| ||||||| |||||||| |||||||| || |||||||| || | |||||||| ||
Sbjct 901 GTGTATTAGTATTGAGGAACAACAATCTCACTGGGACAATACCATCTACTATTGGAGGAT 960
Query 1009 TACTTGGGGCTACGACAACTTGATTTGAGTTTCAACAAGCTA-ACTGGGCAAATTCCAGC 1067
||| | | | |||| |||||||||| |||||||| ||| | ||| | |||||| ||
Sbjct 961 -ACTCAAGTTTGCAACAAGTTGATTTGAGCTTCAACAAACTACA-TGGACCAATTCCGGC 1018
Query 1068 TCCGCTTTTCAACTCAAGAC-AGCTTACTCACTTGTTTCTTGGAAATAACAGGCTGAATG 1126
| | |||||||||| ||| | | ||||||||||||||||| ||||| |||| | ||||||
Sbjct 1019 TTCACTTTTCAACTTAAGTCGA-CTTACTCACTTGTTTCTGGGAAACAACACGTTGAATG 1077
Query 1127 GTTCCTTACCCACTCAAAAGA-GTCCCTCTCTTAGCAATATAGATGTGTCATACAATGAT 1185
||||||||||||||||||||| | | |||| || ||| |||||||||| |||||||||
Sbjct 1078 GTTCCTTACCCACTCAAAAGACG-CAGACTCTGAGAAATGTAGATGTGTCGTACAATGAT 1136
Query 1186 TTAACAGGG-GATCTTCCTTCTTGGGTTC-GCCTACCAAACTTGCAA-CTTAACCT-GAT 1241
|| | || | ||||||||| ||||| | || ||||| | ||| || || ||||| | |
Sbjct 1137 TTGTCTGGAAG-TCTTCCTTCATGGGT-CAGCTTACCAGATTTG-AAGCTCAACCTAG-T 1192
Query 1242 TGCCAACCACTTTACCGTGGGAGGTTCTA-ACAGA-AGGGCTTTACCCCGACTGGACTGC 1299
||| ||| |||| || | | ||| || ||| | |||| |||| | |||| | |||
Sbjct 1193 TGCTAACAACTTCACATTAGAAGGC-CTTGACA-ACAGGGTTTTATCAGGACTAAATTGC 1250
Query 1300 CTCCAGAAGGATTTCCGCTGCAATCGAGGAAAAGGAGTATATT-TCAACTTTTTCG-TCA 1357
|| |||||| | |||| |||||||||||| |||||| | |||| | | ||||| || |||
Sbjct 1251 CTGCAGAAGAACTTCCCCTGCAATCGAGGCAAAGGAATCTATTCTGA-CTTTT-CGGTCA 1308
Query 1358 ATTGTGGAGGCCGGGATATCAGGTCTAG-TAGTGGAGCTTTGTATGAAAAGGACGAGGGG 1416
| || ||||||| || || |||||| | ||| | ||| | | ||| ||||| || | |
Sbjct 1309 ACTGCGGAGGCCCAGAGATAAGGTCT-GCTAGAGAAGCACTATTTGAGAAGGATGACGAG 1367
Query 1417 GCA-CTTGGACCAGCTACTTTT-TTCGTAAGTAAAACG-CAGAGATGGGCAGTCAGCAAT 1473
| |||||||||||| | ||| || || ||| | ||||||||||||| ||| | |
Sbjct 1368 A-ATCTTGGACCAGCTTCATTTATT-GTGAGTGCTG-GTCAGAGATGGGCAGCCAGTAGT 1424
Query 1474 GTAGGACTATTTACTGGGAGTAACAGTA-AT-CAATACATAGCTCTTTCGGCAA-CGCAA 1530
|||||||| ||||| || | || || || || || || || | ||| | ||| | ||
Sbjct 1425 GTAGGACTTTTTACCGGAAATAGCAATATATACA-TA-AT-GA-CTT-CA-CAATCACAG 1478
Query 1531 TTTG-CAAACACGTCAGACTCAGAGCTTTTCCAATCAGCGAGACTCTCTGCATCTTCTTT 1589
||| ||| ||| | ||||| || |||||||| ||||| ||||| ||||||||||| |
Sbjct 1479 TTTATCAA-CACTTTGGACTCGGAACTTTTCCAGTCAGCAAGACTTTCTGCATCTTCCCT 1537
Query 1590 AAGGTATTACGGACTGGGGCTAGAAAATGGAGGCTATAGTGTAACGGTTCAGTTTGCTGA 1649
||||||||| || ||||||||||||||||||| |||| ||||| |||||||||||||
Sbjct 1538 AAGGTATTATGGGTTGGGGCTAGAAAATGGAGGATATACAGTAACCCTTCAGTTTGCTGA 1597
Query 1650 GATACAAATACAAGGTTCTAAT---A-C-CT-GGAAAAGTCTT--GGAAGGCGAA-TTTT 1700
|||||||| | |||||||| | | | || ||||| | ||| ||| | ||| ||||
Sbjct 1598 AATACAAATTCTAGGTTCTACTTCTAGCACTTGGAAA-G-CTTTAGGACGACGACGTTTT 1655
Query 1701 CGACATATATGTCCAGGGAAAACTTGTTGAGAAGGATTTTGACATGCA-A-AA-AGCTGC 1757
||||| ||||||||||||| ||||||||||||||||||||| | | | || |||||
Sbjct 1656 -GACATTTATGTCCAGGGAAGACTTGTTGAGAAGGATTTTGATGTACGTAGAACAGCTGG 1714
Query 1758 TAACGGTTCTAGTATCCGAGTTA-TTCAAAGAGTCTATAAAGCAAATGTATCAGAAAATT 1816
| || | ||| | | ||| | |||| ||||| ||||| ||||||||||||||||||
Sbjct 1715 TGAC--T-CTACTTTTAGAGC-AGTTCAGAGAGTATATAAGGCAAATGTATCAGAAAATC 1770
Query 1817 ACCTTGAAGTTCATCTTTTCTGGGCTGGAAAAGGGACCTGCTGTATTCCTGCTC-AAGGC 1875
|||| |||||||||||||| |||||||| ||||| || || ||||||||| || ||||
Sbjct 1771 ACCTCGAAGTTCATCTTTTTTGGGCTGGGAAAGGAACATGTTGTATTCCTA-TCCAAGGG 1829
Query 1876 ACTTATGGGCCATTAGTCTCAGCTA-TCAGTGCAACTCCAGATTTCATACCTACTGTAAA 1934
||||||| |||||| | ||||| | |||||||||| |||||||||| ||| |||||
Sbjct 1830 GCTTATGGACCATTAATATCAGC-AGTCAGTGCAACACCAGATTTCACACCAACTGTGGT 1888
Query 1935 AAATAAGTTGCCCTCGAAATCCAA-GAAAAACATTGTTA-TCATTGTAGGG-G-CTATTG 1990
|||| | || || ||| || ||| | | || || | ||||| ||| | | ||||
Sbjct 1889 TAATAGGCCACCATC-AAAGGGAAAGAACAGGACTGGTACT-ATTGT-GGGCGTC-ATTG 1944
Query 1991 TAGGAGCAGGGA-TGTT-ATGTATA-TTG-GTGAT-TGCTATCCTCTT-ATTCATCCGTA 2044
| || | ||| | | || | || ||| | | | | | || | || || |||||| |
Sbjct 1945 TTGGCGTAGG-ACTTTTGACC-ATCCTTGCGGG-TGT-CG-TCATGTTTAT-CATCCG-A 1997
Query 2045 GGAAAAGAA-AAAG-GG--CGGCTGATGAAGAAGTGCTAAACAGTCTGCACATAAGGCCC 2100
||||||| ||| || | | ||||| |||| |||| ||| || || ||| ||
Sbjct 1998 --AAAAGAAGAAACCGGTACA-CAGATGATGAAGAGCTACTTAGTATGGACGTAAAACCT 2054
Query 2101 TACACCTTTAGTTACTCAGAACTCAGAACTGCAACTCAAGATTTTGATCCTTCCAACAAG 2160
||||| |||| ||| || ||||| | || |||||||||||||||||||||||| ||||||
Sbjct 2055 TACACTTTTACTTATTCGGAACTTAAAAGTGCAACTCAAGATTTTGATCCTTCAAACAAG 2114
Query 2161 CTTGGGGAGGGAGGATTTGGACCTGTTTTTAAGGGAAAACTGAACGACGGAAGAGAGATA 2220
||||| |||||||| ||||| ||||||| ||||||||| || || || |||||||||||
Sbjct 2115 CTTGGAGAGGGAGGGTTTGGGCCTGTTTATAAGGGAAACCTCAATGATGGAAGAGAGATC 2174
Query 2221 GCCGTGAAGCAATTGTCAGTTGCATCCAGGCAAGGAAAGGGTCAATTTGTTGCGGAGATT 2280
|| ||||||| |||||||||| |||| | ||||| ||||||||||||||||| || |||
Sbjct 2175 GCGGTGAAGCTGTTGTCAGTTGGATCCCGACAAGGGAAGGGTCAATTTGTTGCAGAAATT 2234
Query 2281 GCCA-CTATATCAGCTGTTC-AGCATCGCAACCTTGTAAAA-TTGTATGGATGCTGCATT 2337
| | | || || | |||| | ||||||||||| |||||| || || || |||||| ||
Sbjct 2235 GT-AGCAATTTCTTCAGTTCTA-CATCGCAACCTAGTAAAACTT-TACGGGTGCTGCTTT 2291
Query 2338 GAGGGAAATCAGCGCATGCTTGTATATGA 2366
|| ||| | || || |||||||||||||
Sbjct 2292 GAAGGAGAGCATCGTTTGCTTGTATATGA 2320
> Ahg924152 jgi|Araly1|924152|scaffold_105433.1
Length=2743
Score = 732 bits (396), Expect = 0.0
Identities = 1131/1473 (77%), Gaps = 101/1473 (7%)
Strand=Plus/Plus
Query 955 CTAGTATTAAGGAACAATAATCTCACAGGCACAATACCTTCCAATATTGGAGATTACTTG 1014
|||||||| |||||||| |||||||| || |||||||| || ||||||||||| ||||
Sbjct 849 CTAGTATTGAGGAACAACAATCTCACTGGGACAATACCGTCTAATATTGGAGAATACTCA 908
Query 1015 GGGCTACGACAACTTGATTTGAGTTTCAACAAGCTAAC-TGGGCAAATTCCAGCTCCGCT 1073
| | |||||| |||||||||| |||||||| || || ||| | |||||| ||| | ||
Sbjct 909 AGTTTGCGACAAGTTGATTTGAGCTTCAACAAACT-ACATGGACCAATTCCGGCTTCACT 967
Query 1074 TTTCAACTCAAGACAGCTTACTCACTTGTTTCTTGGAAATAACAGGCTGAATGGTTCCTT 1133
|||||||| ||| || ||||||||||||||||| ||||| |||| | ||||||| |||||
Sbjct 968 TTTCAACTTAAGTCAACTTACTCACTTGTTTCTGGGAAACAACACGTTGAATGGCTCCTT 1027
Query 1134 ACCCACTCAAAAGAGTCCCTCTCTTAGCAATATAGATGTGTCATACAATGATTTAACAGG 1193
|||||||||||||| | ||||| | ||||||||||||||| ||||||||||| | |
Sbjct 1028 GCCCACTCAAAAGAGGCAGTCTCTGATCAATATAGATGTGTCGTACAATGATTTGTC-TG 1086
Query 1194 GGA-TCTTCCTTCT-TGGGTTC-GCCTACCAAACTTGCAACTTAACCTGA-TTGCCAACC 1249
| | |||||||| | |||| || | ||||||||||| |||| || || | | || || |
Sbjct 1087 GAAGTCTTCCTT-TATGGG-TCAGTTTACCAAACTTGAAACTCAATCT-AGTAGCTAA-C 1142
Query 1250 ACTTT-ACCGTGGGAGGTTC-TAACAGA-AGGGCTTTACCCCGACTGGACTGCCTCCAGA 1306
| ||| || ||| ||| || | ||| | || | |||| | ||||| ||||||| ||||
Sbjct 1143 AATTTCACATTGGAAGG-TCTTGACA-ACAGTGTTTTATCAGGACTGAACTGCCTGCAGA 1200
Query 1307 AGGATTTCCG-CTGCAATCGAGGAAAAGGAGTATATT-TCAACTTTTTCG-TCAATTGTG 1363
|| |||| || ||||||||| || |||||| | |||| | ||| |||||| | ||||| |
Sbjct 1201 AGAATTT-CGCCTGCAATCGCGGCAAAGGAATCTATTAT-AAC-TTTTCGATTAATTGCG 1257
Query 1364 GAGGCCGGGATATCAGGTCTAG-TAGTGGAGCTTTGTATGA-AAAGGACGAGGGGGCA-C 1420
|||||| || || |||||| | ||||||||| | ||||| ||| || || || | |
Sbjct 1258 GAGGCCCAGAGATAAGGTCT-GCTAGTGGAGCACTATATGAGAAA-GAGGACATGG-ATC 1314
Query 1421 TTGGACCAGCTACTTTTTTCGTAAGTAAAACGCAGAGATGGGCAGTCAGCAATGTAGG-A 1479
||||||||||| | ||| |||| ||| | ||||||||||||| ||| | |||||| |
Sbjct 1315 TTGGACCAGCTTCGTTTGTCGTGAGTGCTGCTCAGAGATGGGCAGCCAGTAGTGTAGGAA 1374
Query 1480 CTATTTACTGGGAGTAACAGTAATCAATACATAG-CTCTTTCGGCAA-CGCAATTT-GCA 1536
| ||| | || |||| ||| ||| |||| | || | ||| ||| | |||||| |
Sbjct 1375 AT-TTTGCCGGAAGTAGCAGAAATAAATATAGAGAGAC-TTC-ACAATCACAATTTATC- 1430
Query 1537 AACACGTCAGACTCAGAGCTTTTCCAATCAGCGAGACTCTCTGCATCTTCTTTAAGGTAT 1596
||||| | ||||| |||||||| || ||||| ||||| ||||||||||| ||||||||
Sbjct 1431 AACACTTTGGACTCGGAGCTTTTTCAGTCAGCAAGACTTTCTGCATCTTCCCTAAGGTAT 1490
Query 1597 TACGGACTGGGGCTAGAAAATGGAGGCTATAGTGTAACGGTTCAGTTTGCTGAGATACAA 1656
|| || ||||||| |||||||||||||| | || || ||||||||||||| ||||||
Sbjct 1491 TATGGGTTGGGGCTTGAAAATGGAGGCTACACCGTTACACTTCAGTTTGCTGAAATACAA 1550
Query 1657 ATACAAGGTTCTAA-TACCTGGAAAAGTCTTGGAAGGCGA-ATTTTCGACATATATGTCC 1714
|| ||||||||||| | | |||||| || ||||||| ||| |||| ||||| |||||||
Sbjct 1551 ATTCAAGGTTCTAACT-CTTGGAAAGGTATTGGAAGACGACGTTTT-GACATTTATGTCC 1608
Query 1715 AGGGAAAACTTGTTGAGAAGGATTTTGACAT--GCA-AAAAGCTGCTAACGGTTC-T-AG 1769
|||||| ||||||||| ||||||||||| || ||| || ||||| | || || | |
Sbjct 1609 AGGGAAGACTTGTTGAAAAGGATTTTGATATACGCAGAACAGCTGGT---GGGTCTTCGG 1665
Query 1770 TATCCGAGTTA-TTCAAAGAGTCTATAAAGCAAATGTATCAGAAAATTACCTTGAAGTTC 1828
| | |||| | |||| |||| |||||| ||||||||||||||||| | ||||||||||
Sbjct 1666 T-T-CGAG-CAGTTCAGAGAGAATATAAAACAAATGTATCAGAAAATCATCTTGAAGTTC 1722
Query 1829 ATCTTTTCTGGGCTGGAAAAGGGACCTGCTGTATTCCTGCTC-AAGGCACTTATGGGCCA 1887
|||||||||||||||||||||| || |||||||||||| || |||| |||||||||||
Sbjct 1723 ATCTTTTCTGGGCTGGAAAAGGAACATGCTGTATTCCTA-TCCAAGGGGCTTATGGGCCA 1781
Query 1888 TTAGTCTCAGCTATCAGTGCAACTCCAGATTTCATACCTACTGTAAAAAATAAGTTGCCC 1947
||| | || || ||||||||||| |||||||||| ||| ||||| |||| | ||
Sbjct 1782 TTAATATCGGCCATCAGTGCAACACCAGATTTCACACCAACTGTGGCTAATAGGCCACCA 1841
Query 1948 TCGAAATCCAAGAAAAACAT---TGTTA-TCATTGTAGGG-G-CTATTGTAGGAGCAGGG 2001
|| ||| || || ||||| || || | ||||| ||| | | ||||| | | |||
Sbjct 1842 TC-AAAGG-AA-AAGAACATGACTGGTACT-ATTGT-GGGTGTC-ATTGTTGCCGTAGG- 1894
Query 2002 A-TGTT-ATGTATATT-G-GTGAT-TGCT-ATCCTCTTATTCATCCGTAGGAAAAGAA-A 2054
| | || | | || || | | | | || | ||| || || ||||| || ||||| | |
Sbjct 1895 ACTCTTGA-GCATCTTAGCGGG-TGTGGTTATCTTC--AT-CATCC-TA--AAAAGTAGA 1946
Query 2055 AAGGGCGG-CT--GATGAAGAAGTGCTAAACAGTCTGCACATAAGGCCCTACACCTTTAG 2111
||| || | ||||| |||| | || ||| || || ||| ||| ||||||||||
Sbjct 1947 AAGC-CGTACACAGATGATGAAGAGATACTTAGTATGGACGTAAAGCCTTACACCTTTAC 2005
Query 2112 TTACTCAGA-ACTCAGAACTGCAACTCAAGATTTTGATCCTTCCAACAAGCTTGGGGAGG 2170
||||||| | ||| | || |||||| |||||||| ||||| || ||||||||||| ||||
Sbjct 2006 TTACTCA-ATACTTAAAAGTGCAACACAAGATTTCGATCCCTCAAACAAGCTTGGAGAGG 2064
Query 2171 GAG-GATTTGGACCTGTTTTTAAGGGAAAACTGAACGACGGAAGAGAGATAGCCGTGAAG 2229
||| | ||||| ||||| ||||||| || || || ||||||||||| || ||||||
Sbjct 2065 GAGCG-TTTGGGGTTGTTTATAAGGGATCCCTCAATGATGGAAGAGAGATCGCAGTGAAG 2123
Query 2230 CAAT-TGTCA--G-TTGCATC-CAGGCAAGGAAAGGGTCAATTTGTTGCGGAGATTGCCA 2284
|| ||||| | ||| ||| | |||| || ||||||||||||||||| || |||| |
Sbjct 2124 -AAGCTGTCAACGGTTGGATCAC-GGCACGGGAAGGGTCAATTTGTTGCAGAAATTGT-A 2180
Query 2285 -CTATATCAGCTGTTCAGCATCGCAACCTTGTAAAA-TTGTATGGATGCTGCATTGAGGG 2342
| || || | |||| |||||| ||||| |||||| || || || |||||| |||| ||
Sbjct 2181 GCAATTTCTTCAGTTCTGCATCGTAACCTAGTAAAACTT-TACGGGTGCTGCTTTGAAGG 2239
Query 2343 AAATCAGCGCATGCTTGTATATGAATACCTCTC 2375
| ||||||| |||| |||||||| || |||||
Sbjct 2240 AGATCAGCGTTTGCTCGTATATGAGTATCTCTC 2272
> Ahg924151 jgi|Araly1|924151|scaffold_105432.1
Length=3220
Score = 472 bits (255), Expect = 1e-131
Identities = 818/1079 (76%), Gaps = 82/1079 (8%)
Strand=Plus/Plus
Query 1336 GTATATTTCAACTTTTTCG-TCAATTGTGGAGGCCGGGATATCAGGTCTAG-TAGTGGAG 1393
||| |||| ||| |||||| |||| || ||||||| || || |||||| | ||| ||||
Sbjct 1377 GTAGATTTTAAC-TTTTCGATCAACTGCGGAGGCCCAGAGATAAGGTCT-GCTAGCGGAG 1434
Query 1394 CTTTGTATGA-AAAGGACGAGGGGGCA-CTTGGACCAGCTAC-TTTTTTCGTAAGTAAAA 1450
| | ||||| ||| || || || | |||||||||||| | ||| || || |||
Sbjct 1435 CACTATATGAGAAA-GAGGACACGG-ATCTTGGACCAGCTTCGTTTGTT-GTGAGTGCTG 1491
Query 1451 CGCAGAGATGGGCAGTC-AGCAATGTAGG-ACTATTTACTGGGAGTAACAGTAATCAATA 1508
| ||||||||||||| | || | |||||| | | ||| |||| |||| ||||||| ||||
Sbjct 1492 CTCAGAGATGGGCAG-CTAGTAGTGTAGGAAAT-TTTGCTGGAAGTAGCAGTAATAAATA 1549
Query 1509 CATAG-CTCTTTCGGCAA-CGCAATTT-GCAAACACGTCAGACTCAGAGCT-TTTCCAAT 1564
|| || | ||| ||| | |||||| | ||||| | ||||| ||||| ||| || |
Sbjct 1550 CAGAGAGAC-TTC-ACAATCACAATTTATC-AACACTTTGGACTCGGAGCTATTT-CAGT 1605
Query 1565 CAGCGAGACTCTCTGCATCTTCTTTAAGGTATTACGGACTGGGGCTAGAAAATGGAGGCT 1624
|||| ||||| ||||||||||| |||||||||| || |||||||||||||||||||||
Sbjct 1606 CAGCAAGACTTTCTGCATCTTCCCTAAGGTATTATGGGTTGGGGCTAGAAAATGGAGGCT 1665
Query 1625 ATA--GTGTA-ACGGTTCAGTTTGCTGAGATACAAATACAAGGTTCTAA-TACCTGGAAA 1680
||| || || || ||||||||||||| |||||||| ||||||||||| | | ||||||
Sbjct 1666 ATACCGT-TATAC--TTCAGTTTGCTGAAATACAAATTCAAGGTTCTAACT-CTTGGAAA 1721
Query 1681 AGTCTTGGAAGGCGA-ATTTTCGACATATATGTCCAGGGAAAACTTGTTGAGAAGGATTT 1739
|| | || || ||| |||| ||||| ||||||||||||| ||||||||| ||||||||
Sbjct 1722 GGTATCGGGAGACGACGTTTT-GACATTTATGTCCAGGGAAGACTTGTTGAAAAGGATTT 1780
Query 1740 TGA--CATGCA-AAAAGCTGCTAACGGTTCTAGTATCCGAGTTA-TTCA-AAGAGTCTAT 1794
||| | ||| || ||||| | | ||| || | |||| | |||| || || |||
Sbjct 1781 TGATGTACGCAGAACAGCTGGTGGCTCTTC-GGT-T-CGAG-CAGTTCAGAA-AGAATAT 1835
Query 1795 AAAGCAAATGTATCAGAAAATTACCTTGAAGTTCATCTTTTCTGGGCTGGAAAAGGGACC 1854
||| ||||||||||||||||| | |||||||||||||||||||||||||||||||| ||
Sbjct 1836 AAAACAAATGTATCAGAAAATCATCTTGAAGTTCATCTTTTCTGGGCTGGAAAAGGAACA 1895
Query 1855 TGCTGTATTCCTGCTC-AAGGCACTTATGGGCCATTAGTCTCAGCTATCAGTGCAACTCC 1913
|||||||||||| || |||| ||||||||||| || | ||||| ||||||||| ||
Sbjct 1896 TGCTGTATTCCTA-TCCAAGGGGCTTATGGGCCACTAATATCAGCCGTCAGTGCAAGACC 1954
Query 1914 AGATTTCATACCTACTGTAAAAAATAAGTTGCCCTCGAAATCCAA-GAAAAACATTGTTA 1972
|||||| | ||| ||||| |||| | || || ||| || || | | || ||
Sbjct 1955 AGATTTTACACCAACTGTGGCTAATAGGCCACCATC-AAAGGGAAAGAGCAGGACTGGTA 2013
Query 1973 -TCATTGTAGGG-G-CTATTGTAGGAGCAG-GGA-TGTT-ATGTATATT-G-G--TGATT 2022
| ||||| ||| | | ||||| || || ||| | || | | || || | | || ||
Sbjct 2014 CT-ATTGT-GGGTGTC-ATTGTTGG--CATTGGACTTTTGA-GCATCTTTGCGGGTG-TT 2066
Query 2023 GCTATCCTCTTATTCATCCGTAGGAA-AAGAAAAAGGG-CG--GCTGATGAAGAAGTGCT 2078
| ||||||| | ||| || | || ||||||| | | | |||||||||| | ||
Sbjct 2067 GTTATCCTCGT---CATTCGGAA-AAGAAGAAAACCGTACACAGATGATGAAGAAATACT 2122
Query 2079 AAACAGTCTGCACATAAGGCCCTACACCTTTAGTTACTCAGAACTCAGAACTGCAACTCA 2138
| || || || ||| ||| |||||||||| |||||| ||||| | || |||||| ||
Sbjct 2123 TA---GTATGGACGTAAAGCCTTACACCTTTACTTACTCGGAACTTAAAAATGCAACACA 2179
Query 2139 AGATTTTGATCCTTCCAACAAGCTTGGGGAGGGAGGATTTGGACCTGTTTTTAAGGGAAA 2198
|||||||||||| || ||||||||||| |||||||| ||||| |||||| |||||||||
Sbjct 2180 AGATTTTGATCCCTCAAACAAGCTTGGAGAGGGAGGGTTTGGGGCTGTTTATAAGGGAAA 2239
Query 2199 ACTGAACGACGGAAGAGAGATAGCCGTGAAGCAATTGTCAGTTGCATC-CAGGCAAGGAA 2257
|| || || ||||||||| | || |||||||| |||||| ||| || | ||||||| |
Sbjct 2240 CCTCAATGATGGAAGAGAGGTCGCGGTGAAGCAGTTGTCAATTGGTTCAC-GGCAAGGGA 2298
Query 2258 AGGGTCAATTTGTTGCGGAGATTGCCA-CTATATCAGCTGTTC-AGCATCGCAACCTTGT 2315
|||| ||||||||||| || ||| | | || || | |||| | ||||||||||| ||
Sbjct 2299 AGGGACAATTTGTTGCAGAAATTAT-AGCAATTTCTTCAGTTCTA-CATCGCAACCTAGT 2356
Query 2316 AAAA-TTGTATGGATGCTGCATTGAGGGAAATCAGCGCATGCTTGTATATGAATACCTC 2373
|||| || || || |||||| |||| ||| |||| || |||| |||||||| || |||
Sbjct 2357 AAAACTT-TACGGGTGCTGCTTTGAAGGAGATCATCGTTTGCTCGTATATGAGTATCTC 2414
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 123801284969
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5