BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G56340.1
Length=1523
Score E
Sequences producing significant alignments: (Bits) Value
Ahg914924 jgi|Araly1|914924|Al_scaffold_0001_5178 1668 0.0
Ahg919674 jgi|Araly1|919674|scaffold_100955.1 1352 0.0
Ahg471010 jgi|Araly1|471010|fgenesh2_kg.1__964__AT1G09210.1 1280 0.0
> Ahg914924 jgi|Araly1|914924|Al_scaffold_0001_5178
Length=1257
Score = 1668 bits (903), Expect = 0.0
Identities = 1124/1232 (91%), Gaps = 10/1232 (1%)
Strand=Plus/Plus
Query 31 ATGGCGAAACTAAACCCTAAATTCATCTCTTTGATTCTTTTCGCTCTCGTGGTGATCGTC 90
|||| |||||||||| ||||||||||||| | ||||| |||||||||||||| ||||||
Sbjct 1 ATGGGGAAACTAAACTCTAAATTCATCTCGATCATTCTCTTCGCTCTCGTGGTAATCGTC 60
Query 91 TCTGCTGAAGTTATCTTCGAGGAGAAATTCGAAGATGGATGGGAGAAGAGATGGGTAAAA 150
||| |||||||||| ||||||||| |||||| || ||||||||||||||||||||||||
Sbjct 61 TCTTCTGAAGTTATATTCGAGGAGCGATTCGATGACGGATGGGAGAAGAGATGGGTAAAA 120
Query 151 TCTGACTGGAAGAAAGATGATAATACTGCTGGGGAATGGAAACACACAGCTGGAAATTGG 210
|| ||||||||||||||| | || ||||||||||||||||||||||||||||||||||||
Sbjct 121 TCCGACTGGAAGAAAGATAACAACACTGCTGGGGAATGGAAACACACAGCTGGAAATTGG 180
Query 211 TCTGGTGATGCTAACGATAAAGGTATCCAAACTAGCGAGGACTACAGATTCTACGCTATA 270
|||||||| ||||||||||||||||||||||| ||||| ||| |||||||||||||||||
Sbjct 181 TCTGGTGACGCTAACGATAAAGGTATCCAAACAAGCGAAGACAACAGATTCTACGCTATA 240
Query 271 TCAGCTGAATTCCCTGAGTTTAGCAACAAGGATAAGACCTTAGTCTTCCAATTCTCTGTC 330
||| |||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||
Sbjct 241 TCATCTGAATTCCCTGAGTTCAGCAACAAGGACAAGACCCTAGTCTTCCAATTCTCTGTC 300
Query 331 AAGCATGAGCAGAAGCTTGACTGTGGTGGTGGCTACATGAAGTTGCTAAGTGATGATGTT 390
|||||||| ||||||||||||||||||||||| |||||||||||||| |||| |||||||
Sbjct 301 AAGCATGAACAGAAGCTTGACTGTGGTGGTGGTTACATGAAGTTGCTTAGTGGTGATGTT 360
Query 391 GACCAGACGAAATT-CGGAGGAGACACTCCTTACAGCATTATGTTTGGGCCAGATATTTG 449
||||||| ||||| ||||||||||||||||||||| ||||||||||| || |||| ||
Sbjct 361 GACCAGAA-AAATTTCGGAGGAGACACTCCTTACAGTATTATGTTTGGCCCTGATAAATG 419
Query 450 TGGCT-ACAGCACTAAGAAAGTACATGCTATCCTTACTTACAATGGAACCAACCATTTGA 508
||| | ||| ||||||||||||||||||||| ||||| ||||||||||| ||||||||||
Sbjct 420 TGG-TGACAACACTAAGAAAGTACATGCTATTCTTACATACAATGGAACAAACCATTTGA 478
Query 509 TCAAGAAGGAGGTCCCATGTGAGACTGATCAGCTTACTCACGTGTACACCTTCGTCCTCC 568
|||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct 479 TCAAGAAGGAGGTCCCATGTGAGACTGACCAGCTTACTCATGTGTACACCTTCGTCCTCC 538
Query 569 GTCCAGATGCTACTTACAGTATTTTGATTGATAATGTTGAGAAGCAAACTGGTAGCCTTT 628
|||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |
Sbjct 539 GTCCAGATGCTACTTATAGTATTTTGATTGACAATGTTGAGAAGCAAACTGGTAGCCTCT 598
Query 629 ACTCTGACTGGGATCTTCTCCCAGCAAAGAAGATTAAGGATCCAAGTGCTAAGAAGCCTG 688
||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct 599 CCTCTGACTGGGATCTCCTCCCAGCAAAGAAGATTAAGGATCCAAGTGCCAAGAAGCCTG 658
Query 689 AGGACTGGGATGACAAAGAGTACATTCCAGATCCAGAAGACACTAAGCCAGCGGGATATG 748
||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||| |
Sbjct 659 AGGACTGGGATGACAAAAAGTACATTCCTGATCCGGAAGACACTAAGCCAGCGGGATACG 718
Query 749 ATGACATCCCAAAGGAGATTCCAGACACTGACGCAAAGAAGCCTGAGGACTGGGATGATG 808
|||||||||| |||||||||||||||||||| |||||||||||||| || ||||||||||
Sbjct 719 ATGACATCCCTAAGGAGATTCCAGACACTGATGCAAAGAAGCCTGAAGATTGGGATGATG 778
Query 809 AAGAAGATGGTGAGTGGACTGCCCCTACCATTCCCAACCCCGAGTACAATGGTGAATGGA 868
|| || ||||||||||||| |||| |||||||| || || |||||||| |||| |||||
Sbjct 779 AAAAATCTGGTGAGTGGACTACCCCAACCATTCCTAATCCGGAGTACAAGGGTGTATGGA 838
Query 869 AGCCCAAGAAAATTAAGAACCCCGCTTACAAGGGCAAGTGGAAGGCTCCAATGATCGACA 928
||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct 839 AGCCCAAGAAAATCAAGAACCCTAATTACAAGGGCAAGTGGAAGGCTCCAATGATCGACA 898
Query 929 ACCCTGAATTCAAGGATGACCCAGAACTCTATGTCTTCCCCAAATTGAAGTATGTTGGAG 988
||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||| |
Sbjct 899 ACCCTGATTTCAAGGATGACCCAGAACTATATGTCTTCCCCAAATTGAAATATGTTGGGG 958
Query 989 TTGAGTTGTGGCAGGTGAAATCTGGTTCCTTGTTCGACAATGTCTTGGTCAGCGATGACC 1048
| ||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||
Sbjct 959 TGGAGTTGTGGCAGGTGAAATCTGGATCCTTGTTCGACAATGTATTGGTAAGCGATGACC 1018
Query 1049 CAGAGTACGCTAAGAAGTTGGCCGAGGAAACCTGGGGAAAGCACAAGGATGCGGAGAAAG 1108
||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||| |||
Sbjct 1019 CAGAGTACGCTAAGAAGTTGGCCGAAGAAACATGGGGAAAGAACAAGGATGCGGAGGAAG 1078
Query 1109 CAGCATTTGACGAAGCTGAGAAGAAGAGAGAGGAAGAGGAATCAAAGGA--TGCTC-CTG 1165
|||||||||| ||||| |||||||| ||| ||||||||||||||||||| | ||| |||
Sbjct 1079 CAGCATTTGAAGAAGCAGAGAAGAAAAGACAGGAAGAGGAATCAAAGGAACTTCTCGCTG 1138
Query 1166 C--T-GAATCCGACGCTGAGGAAGAAGCAGAAGATGATGACAATGAAGGAGATGACTCAG 1222
| ||||| |||| | |||||||||| ||| ||||||||||||||||||||||||| |
Sbjct 1139 AAGTTGAATCTGACGATAAGGAAGAAGCTGAAAATGATGACAATGAAGGAGATGACTCGG 1198
Query 1223 ACAATGAATCAAAGTCTGAGGAAACCAAGGAG 1254
|||| |||| |||| ||||||||| ||||||
Sbjct 1199 ACAACAAATCGAAGTTTGAGGAAACTAAGGAG 1230
> Ahg919674 jgi|Araly1|919674|scaffold_100955.1
Length=1316
Score = 1352 bits (732), Expect = 0.0
Identities = 1071/1235 (87%), Gaps = 22/1235 (2%)
Strand=Plus/Plus
Query 10 CTCCGATCTGAGTTTTTAGCAATGGCGAAACTAAACCCTA-AATTCATCTCTTTGATTCT 68
|||||||||||||||||||||||||||||| || | || | || ||||| |||||||
Sbjct 1 CTCCGATCTGAGTTTTTAGCAATGGCGAAATTAGTCAATAGCA-TCGTCTCTCTGATTCT 59
Query 69 TTTCGCTCTCGTGGTGATCGTCTCTGCTGAAGTTATCTTCGAGGAGAAATTCGAAGATGG 128
| ||| |||||| | ||||| ||| || | |||||||||||||||| || || |||||
Sbjct 60 TATCGGTCTCGTCGCGATCGCCTCCGCGGCAGTTATCTTCGAGGAGCGCTTTGATGATGG 119
Query 129 ATGGGAGAAG-AGATGGGTAAAATCTGACTGGAAGAAAGATGATAATACTGCTGGGGAAT 187
|||||| ||| |||||||| |||||||| |||||||| |||||||| ||||||||||| |
Sbjct 120 ATGGGA-AAGCAGATGGGTTAAATCTGAGTGGAAGAAGGATGATAACACTGCTGGGGAGT 178
Query 188 GGAAACACACAGCTGGAAATTGGTCTGGTGA-TGCTAACGATAAAGGTATCCAAACTAGC 246
|||||||||| || ||||||||||||||||| | ||||||||||||||||||| || ||
Sbjct 179 GGAAACACACTGCGGGAAATTGGTCTGGTGACT-CTAACGATAAAGGTATCCAGACCAGT 237
Query 247 GAGGACTACAGATTCTACGCTATATCAGCTGAATTCCCTGAGTTTAGCAACAAGGATAAG 306
|||||||||||||||||||| || |||||||| |||||||| || || |||||||| ||
Sbjct 238 GAGGACTACAGATTCTACGCCATTTCAGCTGAGTTCCCTGAATTCAGTAACAAGGACAAA 297
Query 307 ACCTTAGTCTTCCAATTCTCTGTCAAGCATGAGCAGAAGCTTGACTGTGGTGGTGGCTAC 366
|||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||
Sbjct 298 ACCTTAGTCTTCCAATTCTCAGTCAAGCACGAGCAAAAGCTTGACTGTGGTGGTGGCTAC 357
Query 367 ATGAAGTTGCTAAGTGATGATGTTGACCAGACGAAATTCGGAGGAGACACTCCTTACAGC 426
|||||| |||| |||| |||||||||||||| |||||| || |||||||| || |||||
Sbjct 358 ATGAAGCTGCTCAGTGGTGATGTTGACCAGAAGAAATTTGGTGGAGACACCCCATACAGT 417
Query 427 ATTATGTTTGGGCCAGATATTTGTGGCTACAGCACTAAGAAAGTACATGCTATCCTTACT 486
|| |||||||| || ||||| |||||||||||||| |||||||| ||||||||||||||
Sbjct 418 ATCATGTTTGGTCCCGATATCTGTGGCTACAGCACAAAGAAAGTGCATGCTATCCTTACC 477
Query 487 TACAATGGAA-CCAACCATTTGATCAAGAAGGAGGTCCCATGTGAGACTGATCAGCTTAC 545
|||||| ||| ||||||| ||||||||||||| || |||||||| ||||||||||||||
Sbjct 478 TACAAT-GAAGCCAACCACCTGATCAAGAAGGATGTTCCATGTGAAACTGATCAGCTTAC 536
Query 546 TCACGTGTACACCTTCGTCCTCCGTCCAGATGCTACTTACAGTATTTTGATTGATAATGT 605
|| |||||||||||| ||||||| |||||||| |||||||| ||| | || || |||||
Sbjct 537 CCATGTGTACACCTTCATCCTCCGCCCAGATGCAACTTACAGCATTCTCATCGACAATGT 596
Query 606 TGAGAAGCAAACTGGTAGCCTTTACTCTGACTGGGATCTTCTCCCAGCAAAGAAGATTAA 665
|||||||||||| ||||||||||||||||||||||||||||||||| | |||||||| ||
Sbjct 597 TGAGAAGCAAACGGGTAGCCTTTACTCTGACTGGGATCTTCTCCCACCCAAGAAGATCAA 656
Query 666 GGATCCAAGTGCTAAGAAGCCTGAGGACTGGGATGACAAAGAGTACATTCCAGATCCAGA 725
||| || || || |||||||||||||||||||| ||| |||| |||||| | || || ||
Sbjct 657 GGACCCCAGCGCCAAGAAGCCTGAGGACTGGGACGACCAAGAATACATTGCTGACCCTGA 716
Query 726 AGACACTAAGCCAG-CGGGATATGATGACATCCCAAAGGAGATTCCAGACACTGACGCAA 784
||||| || || | | ||||| ||||| |||||||||||||| |||||||| ||||| |
Sbjct 717 AGACAAGAAACCTGAC-GGATACGATGATATCCCAAAGGAGATCCCAGACACCGACGCTA 775
Query 785 AGAAGCCTGAGGACTGGGATGATGAAGAAGATGGTGAGTGGACTGCCCCTACCATTCCCA 844
||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct 776 AGAAGCCTGAGGACTGGGATGATGAAGAAGATGGTGAGTGGACTGCCCCCACCATCCCCA 835
Query 845 ACCCCGAGTACAATGGTGAATGGAAGCCCAAGAAAATTAAGAACCCCG-CTTACAAGGGC 903
|||| || |||||||||||||||||||| ||| |||| ||||||||| || ||||||||
Sbjct 836 ACCCTGAATACAATGGTGAATGGAAGCCTAAGCAAATCAAGAACCCCAACT-ACAAGGGC 894
Query 904 AAGTGGAAGGCTCCAATGATCGACAACCCTGAATTCAAGGATGACCCAGAACTCTATGTC 963
||||||||||||||| |||| || |||||||| ||||||||||||||||| |||||||||
Sbjct 895 AAGTGGAAGGCTCCATTGATTGATAACCCTGACTTCAAGGATGACCCAGAGCTCTATGTC 954
Query 964 TTCCCCAAATTGAAGTATGTTGGAGTTGAGTTGTGGCAGGTGAAATCTGGTTC-CTTGTT 1022
|||||||| |||||||||||||| | || ||||||||||||||||| || || || |||
Sbjct 955 TTCCCCAAGCTGAAGTATGTTGGACTCGAATTGTGGCAGGTGAAATCAGGATCTCT-GTT 1013
Query 1023 CGACAATGTCTTGGTCAGCGATGACCCAGAGTACGCTAAGAAGTTGGCCGAGGAAACCTG 1082
|||||||||||| || ||||||||||||| || || ||||||||||| |||||||| ||
Sbjct 1014 TGACAATGTCTTGATCTGCGATGACCCAGACTATGCCAAGAAGTTGGCAGAGGAAACATG 1073
Query 1083 GGGAAAGCACAAGGATGCGGAGAAAGCAGCATTT-GACGAAGCTGAGAAGAAGAGAGAGG 1141
|||||||| ||||||||||||||||||||| ||| || || ||||||||||||| |||||
Sbjct 1074 GGGAAAGCTCAAGGATGCGGAGAAAGCAGC-TTTCGATGAGGCTGAGAAGAAGAAAGAGG 1132
Query 1142 AAGAGGAATCAAAGGATGCTCCTGCTGAATCCGACGCTGAGGAAGAAGCAGAAGATGATG 1201
|||||||||| |||||||| ||||| ||||| || ||||| || ||| |||| | ||||
Sbjct 1133 AAGAGGAATCCAAGGATGCACCTGCGGAATCTGATGCTGAAGAGGAACCAGA-G--GATG 1189
Query 1202 ACAATGAAGGAGATGACTCAGACAATGAATCAAAG 1236
| ||||||||||||||| || |||||| |||
Sbjct 1190 A---TGAAGGAGATGACTCTGATTCTGAATCTAAG 1221
> Ahg471010 jgi|Araly1|471010|fgenesh2_kg.1__964__AT1G09210.1
Length=1520
Score = 1280 bits (693), Expect = 0.0
Identities = 1051/1223 (86%), Gaps = 27/1223 (2%)
Strand=Plus/Plus
Query 31 ATGGCGAAACTAAACCCTAAATTCATCTCTTTGATTCTTTTCGCTCTCGTGGTGATCGTC 90
||||||||| ||| | ||| || ||||| |||||||| ||| |||||| | ||| |
Sbjct 1 ATGGCGAAATTAATCACTAGCCTCGTCTCTCTGATTCTTATCGGTCTCGT--CG-TCGCC 57
Query 91 TCTGCTGAAGTTATCTTCGAGGAGAAATTCGAAGATGGATGGGAGAAG-AGATGGGTAAA 149
|| || | |||||||||||| ||| ||||| ||||||||||| ||| |||||||| ||
Sbjct 58 TCCGCGGCAGTTATCTTCGAAGAGCGCTTCGATGATGGATGGGA-AAGCAGATGGGTTAA 116
Query 150 ATCTGACTGGAAGAAAGATGATAATACTGCTGGGGAATGGAAACACACAGCTGGAAATTG 209
|||||| |||||||| |||||||| ||||||||||| ||||||||||| |||||||||||
Sbjct 117 ATCTGAGTGGAAGAAGGATGATAACACTGCTGGGGAGTGGAAACACACTGCTGGAAATTG 176
Query 210 GTCTGGTGA-TGCTAACGATAAAGGTATCCAAACTAGCGAGGACTACAGATTCTACGCTA 268
||||||||| | ||||||||||||||||||| ||||| |||||||||||||||||||| |
Sbjct 177 GTCTGGTGACT-CTAACGATAAAGGTATCCAGACTAGTGAGGACTACAGATTCTACGCCA 235
Query 269 TATCAGCTGAATTCCCTGAGTTTAGCAACAAGGATAAGACCTTAGTCTTCCAATTCTCTG 328
| |||||||| |||||||| || || |||||||| || |||||||||||||| ||||| |
Sbjct 236 TTTCAGCTGAGTTCCCTGAATTCAGTAACAAGGACAAAACCTTAGTCTTCCAGTTCTCAG 295
Query 329 TCAAGCATGAGCAGAAGCTTGACTGTGGTGGTGGCTACATGAAGTTGCTAAGTGATGATG 388
||||||| ||||| |||||||||||||||||||||||||||||| |||| |||| |||||
Sbjct 296 TCAAGCACGAGCAAAAGCTTGACTGTGGTGGTGGCTACATGAAGCTGCTCAGTGGTGATG 355
Query 389 TTGACCAGACGAAATTCGGAGGAGACACTCCTTACAGCATTATGTTTGGGCCAGATATTT 448
||||||||| |||||| || |||||||| || ||||| || |||||||| || ||||| |
Sbjct 356 TTGACCAGAAGAAATTTGGTGGAGACACCCCATACAGTATCATGTTTGGTCCCGATATCT 415
Query 449 GTGGCTACAGCACTAAGAAAGTACATGCTATCCTTACTTACAATGGAA-CCAACCATTTG 507
||||||||||||| |||||||| |||||||||||||| |||||| ||| ||||||| ||
Sbjct 416 GTGGCTACAGCACAAAGAAAGTGCATGCTATCCTTACCTACAAT-GAAGCCAACCACCTG 474
Query 508 ATCAAGAAGGAGGTCCCATGTGAGACTGATCAGCTTACTCACGTGTACACCTTCGTCCTC 567
||||||||||| || |||||||| |||||||||||||| || |||||||||||| |||||
Sbjct 475 ATCAAGAAGGATGTTCCATGTGAAACTGATCAGCTTACCCATGTGTACACCTTCATCCTC 534
Query 568 CGTCCAGATGCTACTTACAGTATTTTGATTGATAATGTTGAGAAGCAAACTGGTAGCCTT 627
|| |||||||| |||||||| ||| | || || ||||||||||||||||| |||||||||
Sbjct 535 CGCCCAGATGCAACTTACAGCATTCTCATCGACAATGTTGAGAAGCAAACGGGTAGCCTT 594
Query 628 TACTCTGACTGGGATCTTCTCCCAGCAAAGAAGATTAAGGATCCAAGTGCTAAGAAGCCT 687
|||||||||||||||||||||||| | |||||||| ||||| || || || |||||||||
Sbjct 595 TACTCTGACTGGGATCTTCTCCCACCCAAGAAGATCAAGGACCCCAGCGCCAAGAAGCCT 654
Query 688 GAGGACTGGGATGACAAAGAGTACATTCCAGATCCAGAAGACACTAAGCCAG-CGGGATA 746
||||| ||||| ||| |||| |||||| | || || ||||||| || || | | |||||
Sbjct 655 GAGGATTGGGACGACCAAGAATACATTTCTGACCCTGAAGACAAGAAACCTGAC-GGATA 713
Query 747 TGATGACATCCCAAAGGAGATTCCAGACACTGACGCAAAGAAGCCTGAGGACTGGGATGA 806
||||| |||||||||||||| |||||||| ||| |||||||||||||||||||||||||
Sbjct 714 CGATGATATCCCAAAGGAGATCCCAGACACCGACTCAAAGAAGCCTGAGGACTGGGATGA 773
Query 807 TGAAGAAGATGGTGAGTGGACTGCCCCTACCATTCCCAACCCCGAGTACAATGG-TGAAT 865
||||||||||||||||||||||||||| ||||| |||||||| ||||||| ||| |||||
Sbjct 774 TGAAGAAGATGGTGAGTGGACTGCCCCGACCATCCCCAACCCTGAGTACA-TGGGTGAAT 832
Query 866 GGAAGCCCAAGAAAATTAAGAACCCCG-CTTACAAGGGCAAGTGGAAGGCTCCAATGATC 924
||||||| ||| |||| ||||||||| || ||||||||||||||||||| ||||||||
Sbjct 833 GGAAGCCTAAGCAAATCAAGAACCCCAACT-ACAAGGGCAAGTGGAAGGCACCAATGATT 891
Query 925 GACAACCCTGAATTCAAGGATGACCCAGAACTCTATGTCTTCCCCAAATTGAAGTATGTT 984
||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 892 GACAACCCTGACTTCAAGGATGACCCAGAGCTCTATGTCTTCCCCAAGCTGAAGTATGTT 951
Query 985 GGAGTTGAGTTGTGGCAGGTGAAATCTGGTTC-CTTGTTCGACAATGTCTTGGTCAGCGA 1043
||| | || ||||||||||||||||| || || || ||| || ||||||||| || ||||
Sbjct 952 GGACTCGAATTGTGGCAGGTGAAATCAGGATCGCT-GTTTGATAATGTCTTGATCTGCGA 1010
Query 1044 TGACCCAGAGTACGCTAAGAAGTTGGCCGAGGAAACCTGGGGAAAGCACAAGGATGCGGA 1103
||||||||| ||||| ||||||||||| || ||||| |||||||||| ||||||||||||
Sbjct 1011 TGACCCAGACTACGCCAAGAAGTTGGCAGATGAAACATGGGGAAAGCTCAAGGATGCGGA 1070
Query 1104 GAAAGCAGCATTT-GACGAAGCTGAGAAGAAGAGA-GAGGAAGAGGAATCAAAGGATGCT 1161
|||||||| ||| || || || |||||||||| | |||||||||||||| ||||| ||
Sbjct 1071 AAAAGCAGC-TTTCGATGAGGCGGAGAAGAAGA-ATGAGGAAGAGGAATCCAAGGACGCA 1128
Query 1162 CCTGCTGAATCCGACGCTGAGGAAGAAGCAGAAGATGATGACAATGAAGGAGATGACTCA 1221
||||| || || || ||||| || ||| |||| |||||||| || | |||||| |||
Sbjct 1129 CCTGCAGATTCTGATGCTGAAGAGGAACCAGAGGATGATGA---TG--G-AGATGAATCA 1182
Query 1222 GACAATGAATCAAAGTCTGAGGA 1244
|| |||||| ||| |||||||
Sbjct 1183 GATTCTGAATCTAAGGCTGAGGA 1205
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 57021096765
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5