BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G56520.2
Length=3624
Score E
Sequences producing significant alignments: (Bits) Value
Ahg914947 jgi|Araly1|914947|Al_scaffold_0001_5201 2028 0.0
Ahg474812 jgi|Araly1|474812|fgenesh2_kg.1__4766__AT1G56540.1 1471 0.0
Ahg907275 jgi|Araly1|907275|Al_scaffold_0002_356 826 0.0
Ahg907022 jgi|Araly1|907022|Al_scaffold_0002_103 435 1e-120
Ahg914939 jgi|Araly1|914939|Al_scaffold_0001_5193 405 1e-111
Ahg907475 jgi|Araly1|907475|Al_scaffold_0002_556 196 7e-49
Ahg493465 jgi|Araly1|493465|fgenesh2_kg.7__2898__AT4G14370.1 159 1e-37
Ahg924354 jgi|Araly1|924354|scaffold_105635.1 78.7 3e-13
Ahg907021 jgi|Araly1|907021|Al_scaffold_0002_102 62.1 3e-08
Ahg337990 jgi|Araly1|337990|fgenesh1_pg.C_scaffold_2000089 62.1 3e-08
> Ahg914947 jgi|Araly1|914947|Al_scaffold_0001_5201
Length=3180
Score = 2028 bits (1098), Expect = 0.0
Identities = 2225/2751 (81%), Gaps = 149/2751 (5%)
Strand=Plus/Plus
Query 55 ATGGCTTCTTCTTCTTCCTCACCTCGCAACT-GGAGATACAATGTCTTCACGAGCTTCCA 113
|||||| ||||| |||| || |||||| || |||| |||||||||||||||||||||||
Sbjct 1 ATGGCTACTTCTCCTTCTTCGTCTCGCACCTGGGAG-TACAATGTCTTCACGAGCTTCCA 59
Query 114 TGGACCAGACGTCCGTATTAAATTTCTCAGTCATTTACGTCAAC-AGTTTATTTACAATG 172
||||||||||||||| | | |||||||||||||||||| |||| |||||| | ||||
Sbjct 60 TGGACCAGACGTCCGCAAGACATTTCTCAGTCATTTACG-CAACCAGTTTAACCAAAATG 118
Query 173 GAATTACTATGTTCGATGACAACGGGATCGAAAGAAGCCAAATTAT-CGC-TCCAGCTCT 230
| || || ||||||||||||||||||||| |||||| ||| ||| | | || |||||
Sbjct 119 GTATCACAATGTTCGATGACAACGGGATCCCGAGAAGCGAAAATATAC-CATCT-GCTCT 176
Query 231 CAAAAAAGCCATTGGAGAATCGAGGATCGCGATCTTATTGCTCTCGAAGAACTATGCTTC 290
|| | ||| ||| ||||||| |||||| ||||| || |||||||||||| ||||||||
Sbjct 177 CATACAAGGGATTAGAGAATCAAGGATCTCGATCATAGTGCTCTCGAAGATGTATGCTTC 236
Query 291 TTCCAGTTGGTCTTTGGATGAGCTATTGGAGATTTTAAAGTGCAAAGAAGATATAGGGCA 350
||||| |||| ||||||||||||||| |||||||| |||||||||||||||||||| |
Sbjct 237 GTCCAGGTGGTGTTTGGATGAGCTATTAGAGATTTTGAAGTGCAAAGAAGATATAGGTAA 296
Query 351 AATAGTGATGACTGTCTTCTACGAAGTTGATCCTTCTGATGTCCGCAACCAAACCGGAGA 410
|||||||||||| |||||||||| ||| ||||| |||||||| || |||||||| |||||
Sbjct 297 AATAGTGATGACCGTCTTCTACGGAGTAGATCCATCTGATGTGCGGAACCAAACTGGAGA 356
Query 411 TTTTGGGATTGCTTTTAA-AGAAACTTGTGCTC-ATAAAACAGAGGAGGA-GAGGCA-AA 466
||| ||||| ||||| || | |||||||||||| | |||||| ||||| | | || | ||
Sbjct 357 TTTCGGGATCGCTTTCAATA-AAACTTGTGCTCGA-AAAACAAAGGAGCATG-GG-AGAA 412
Query 467 AATGGACCCAAGCTTTG-ACCTATGTGGGCAACATTGCCGGAGAAGACTTTAAACACTGG 525
|||||| | |||||||| || |||||||||||||| ||||||||| || || | |||
Sbjct 413 AATGGAGCGAAGCTTTGGAC-TATGTGGGCAACATAGCCGGAGAACAC---AA-C--TGG 465
Query 526 CCCAATGAAGCTA-AAATGATCGAGAAGATTGCAAGAGATGTTTCAGATATACTAAACGT 584
||||||||| | ||||||||| |||||||||||||||||||||||||| | | ||||
Sbjct 466 GGCAATGAAGC-AGAAATGATCGCGAAGATTGCAAGAGATGTTTCAGATAGATTGAACGC 524
Query 585 CACACCGTGTAGGGATTTTGATGGCATGGTTGGACT--AAACGATCATTTGAGGGAAATG 642
||||| || ||||||||||||||||||||||||||| |||| ||||||||| ||||||
Sbjct 525 CACACTGTCTAGGGATTTTGATGGCATGGTTGGACTTGAAAC--TCATTTGAGAGAAATG 582
Query 643 GAGTCTTTGCT-AGATTTAAAGAATGATGGAGTTAAGATTGTTGGAATCTCTGGTCCTGC 701
||||||||||| | |||| | ||| ||||||||| |||||||| | ||||||||||
Sbjct 583 GAGTCTTTGCTTA-ATTTTGATTATGTTGGAGTTAAAATTGTTGGGTTAGCTGGTCCTGC 641
Query 702 AGGCATTGGTAAAAGTACCATTGCTACAGCTTTACATGGTCGACTCTCTAACATGTTTCA 761
||| |||||||| || |||||||| | ||||||| | || |||||||||||| ||||||
Sbjct 642 AGGTATTGGTAAGAGCACCATTGCCAGAGCTTTATGTAGTGGACTCTCTAACAGGTTTCA 701
Query 762 GCGTACTTGTTTTGTGGACAATCTTAGGGAAAGCTATAAGATTGGTCTTGATGAGTATCG 821
|||||||||||| ||||||| |||| ||||| || |||||||||||||| ||||||| |
Sbjct 702 ACGTACTTGTTTTATGGACAACCTTATGGAAAACTGTAAGATTGGTCTTGGTGAGTATAG 761
Query 822 TTTGAAGTTGCACTTACAACAGCAACTTCTTGCATATGTTT-TAAATC-AGGATAAAATT 879
||||||||||||||| ||| |||| |||||| | || | || | |||| | || |||
Sbjct 762 TTTGAAGTTGCACTTGCAAGAGCAGCTTCTTTC-TAAGGTTCTGAATCTAA-ATGGCATT 819
Query 880 AGGGTGGGCCATTTAAGTGTGATGA-AAGAAAGGCTTGACGACTTGAGGGTTCTTATTAT 938
||| | ||||||||| ||||| | |||| ||||| ||||| |||| ||||||| ||
Sbjct 820 AGGATATCCCATTTAAGAGTGAT-ACAAGAGAGGCTACACGACAAGAGGATTCTTATCAT 878
Query 939 TCTTGATGATGTGGAGCATCTA-TATCAACTAGAGGCTTTGGCTGATATCAGGTGGTTTG 997
|||||||||||| ||| ||||| | ||||||||||||||||||| ||||||| |||||||
Sbjct 879 TCTTGATGATGTTGAGAATCTAGT-TCAACTAGAGGCTTTGGCTAATATCAGCTGGTTTG 937
Query 998 GTCCTGGAAGTAGGGTGATAGTGACCACTGAAAACAGAGAGATTTTGCTGCAACATGGTA 1057
|||||||||||||||| || |||||||||||||||| ||||||||||| |||||||||||
Sbjct 938 GTCCTGGAAGTAGGGTTATCGTGACCACTGAAAACAAAGAGATTTTGCAGCAACATGGTA 997
Query 1058 TCAAGGATATATACCATGTGGGTTTTCCATCAGAAGGAGAAGCTCTAATGATCTTTTGTC 1117
|||| ||||||||||| |||||||||||||||||| | |||||||||| |||||| ||||
Sbjct 998 TCAATGATATATACCAAGTGGGTTTTCCATCAGAAAGCGAAGCTCTAACGATCTTCTGTC 1057
Query 1118 TATCTGCTTTTAGACAACCCTCTCCACCTTATGGTTTTTTGAAGCTTACATATGAAGTTG 1177
||||||||||||| ||| | |||||||| |||| ||| |||||||||| | ||||||||
Sbjct 1058 TATCTGCTTTTAGGCAAACGTCTCCACCGGATGGGTTTATGAAGCTTACTTGTGAAGTTG 1117
Query 1178 C-AAGTATTTGTGGTAATCTTCCATTGGGTCTGCATGTTTTGGGGACGTT-ATTGTGGGG 1235
||| ||||||||||||||||||||||||||||||||||||||| | || |||| ||||
Sbjct 1118 TTAAG-ATTTGTGGTAATCTTCCATTGGGTCTGCATGTTTTGGGGTC-TTCATTGCGGGG 1175
Query 1236 AAAAAGTCAGGCTGACTGGATTGAAGAACTACCAAGGTTGAAAGACT-GTCTTGATGGAA 1294
||| ||||| ||||| |||||||| |||||||||||||||||| | | |||||||||| |
Sbjct 1176 AAAGAGTCAAGCTGATTGGATTGATGAACTACCAAGGTTGAAA-ATTTGTCTTGATGGGA 1234
Query 1295 GAATTGAGAGTGTATTGAAAGTTGGCTATGAGAGTTTATATGAGAAAGACCAAGCTCTTT 1354
|||||||||| ||| | ||||| || |||||||||||| ||||||||||||||| | | |
Sbjct 1235 GAATTGAGAGCGTACTAAAAGTGGGTTATGAGAGTTTACATGAGAAAGACCAAGTTATAT 1294
Query 1355 TTCTCCTCATTGCAGTCTACTTCAATTATG-ATTATGTTGATTATGTGACATCCATGCTA 1413
|||||||||||||| ||| ||| ||||||| | |||||||| ||||||||||| ||||
Sbjct 1295 TTCTCCTCATTGCAATCTTCTTGAATTATGCAC-ATGTTGATCATGTGACATCCGTGCTG 1353
Query 1414 G-AAAATACTAACGTATTGGATGTTAGACTTGGGTTGAAAAAACTAGCTAATAGATGTCT 1472
| |||| |||||| | | ||| ||||| |||||||||||||| ||||| || | || |||
Sbjct 1354 GCAAAA-ACTAAC-T-T-GGACGTTAGTCTTGGGTTGAAAAACCTAGCGAAAAAATATCT 1409
Query 1473 TATACAAATAGATATAGACCATAATCGCAAAAGTAGAGTCGTAATGAACCGGTTGCTACA 1532
|||||| | | || | | | | ||| |||||||||| ||| ||||| ||
Sbjct 1410 CATACAAC--G-T---GA--A-AGT---A---GTATAGTCGTAATGCACCATTTGCTTCA 1454
Query 1533 AGTAATGGCT-CGAGAAGTTATTTCCAAACAAAAAATTTCCAAACGAAAGATTCTAGAAG 1591
|||||||||| | | |||| |||||||||||| || ||||||||| ||||| ||| |
Sbjct 1455 AGTAATGGCTAC-ACAAGTCATTTCCAAACAAGAACGTTCCAAACGCCAGATTTTAGTCG 1513
Query 1592 ATCCCCAGGATATTTGTTATGTTCTAGAAGA-GGCA-AAGGGTAAAGGATCAGCTT-TAG 1648
|| || | || ||||||| |||||||||| | |||| |||| ||| |||||| || |||
Sbjct 1514 ATGCCAATGAAATTTGTTTTGTTCTAGAA-ATGGCAGAAGG-TAATGGATCAA-TTATAG 1570
Query 1649 GAT-TATCATTGGACGTAGCAGAGATCAAAGAATTA-GTAATAAACAAAAAGGCTTTTaa 1706
| | ||||||| |||||||| |||||||| |||||| | ||||| | | |||||||
Sbjct 1571 G-TGTATCATTTGACGTAGCTGAGATCAATGAATTAAG-AATAAGCGCGACGGCTTTTGC 1628
Query 1707 aaaaaTGTGCAATCTTCTCAT-CTTAAAAGTCTTTAATGGGACGGATCCCCGAGATAGTA 1765
|||||||||||||||| ||| | ||||||| | ||||||| || | || | | |
Sbjct 1629 AAAAATGTGCAATCTTG-CATTCCTAAAAGTATACAATGGGAAACATACT-GAAAAAACA 1686
Query 1766 -AATTGCACGTACCAGAGGAGATGGAGCTTCCATC-TAGCATAAGGTTACTACATTGGGA 1823
|| ||||| | ||| | |||||||| ||||| | | || ||| |||||||||||||||
Sbjct 1687 CAACTGCACATTCCAAATGAGATGGAATTTCCA-CGTCGCCTAAAGTTACTACATTGGGA 1745
Query 1824 GGCATACCCGAGAAA-A-TCT---T-TTAGATTTGGTCCAGAAAATCTCGTCACACTCAA 1877
|||||||| | ||| | ||| | || ||||| ||| |||||||||||||| | ||||
Sbjct 1746 AGCATACCCAAAAAAGAGTCTACCTATTGGATTTTGTCTAGAAAATCTCGTCAAATTCAA 1805
Query 1878 CATGG-AGTACAGTGAGCTCGAGAAGCTATGGAAAGGAACTCAGCCACTTGCAAATCTCA 1936
||||| | | || ||||||||||||| ||| ||||||||||||| |||||||||||||
Sbjct 1806 CATGGCATTT-AGCAAGCTCGAGAAGCTTTGGGAAGGAACTCAGCCGCTTGCAAATCTCA 1864
Query 1937 AGGAGATGAA-CTTG-TGTGGGTCATCTTGTTTGAAGGAACTCCCAGATCTTTCGAAAGC 1994
|||||||||| || | |||| ||| || |||||| ||||| ||||||||||| |||||
Sbjct 1865 AGGAGATGAATCTCGCTGTG--TCAACTCATTTGAAAGAACTTCCAGATCTTTCAAAAGC 1922
Query 1995 -AGCAAATCTGGAGAGATTGGATGTGGCTGAGT-GCAATGCTTTGGTAGAGATTCCATCC 2052
| |||||||||| || ||| || | || || ||| ||| ||||||||||||||||||
Sbjct 1923 TA-CAAATCTGGAAAGTTTGAATCTTAATG-GTTGCACTGCGTTGGTAGAGATTCCATCC 1980
Query 2053 TCAGTTGCGAATCTTCACAAAATA-GTTAACTTACACATGGAATCCT-GTGAAAGTCTAG 2110
||| ||| ||||||||| ||| || || || ||| ||| | | || | ||||||||||
Sbjct 1981 TCAATTGTGAATCTTCATAAACTAAGTGAA-TTAGGGATG-AGTACTTGCGAAAGTCTAG 2038
Query 2111 AAGTCATTCCAACTCTCATCAACTTGGCATCTCTT-AAGATTATCAACATACATGATTGC 2169
||||||||||||||||||||||||||||||||||| || | ||| || | | ||
Sbjct 2039 AAGTCATTCCAACTCTCATCAACTTGGCATCTCTTGAA-AGGATCTGGATGTTTCAAAGC 2097
Query 2170 CCACGG-TTGAAAAGTTTTCCAGATGT-TCCCACCAGCCTCGAGGAACTTGTGATAGA-G 2226
| || || ||||| ||||||||| | ||| |||| | || ||||| | | |||| | |
Sbjct 2098 CTACAACTT-AAAAGATTTCCAGAT-TCTCCTACCAACGTCAAGGAAATCGAGATATACG 2155
Query 2227 AAAACAGGGGTACAAGAATTGCCTGCATCATTTAGGCATTGCACTGGTGTTACTACTCTT 2286
| | |||||||| |||| |||||||||||| |||||||||||||| | |||||||||||
Sbjct 2156 ATA-CAGGGGTAGAAGAGTTGCCTGCATCACTTAGGCATTGCACTCGCCTTACTACTCTT 2214
Query 2287 TATATATGTTCCAATAGAAATCTCAAGACCTTCTCAACACATCTCCCCATGGGTCTA--A 2344
||||||||||||| |||||| ||||||||||||||||||||||||| | | || || |
Sbjct 2215 GATATATGTTCCAACAGAAATTTCAAGACCTTCTCAACACATCTCCCTACGTGTATATCA 2274
Query 2345 -GGAAGCTA-GACCTAAGCAATTGTGGTATTGAGTGGGTTACAGATAGCATCAAAGATCT 2402
||| || | ||| || ||| ||||||||||| || |||||||| ||||||||| |||
Sbjct 2275 TGGA---TAAG-CCTGAGTAATAGTGGTATTGAGAGGATTACAGATTGCATCAAAGGTCT 2330
Query 2403 TCATAATCTATA-TTACCTTAAACTATCAGGCTGCAAAAGACTTGTGTCTTTGCCAGAAC 2461
|||||||||| | || ||||| || |||||||||||| ||| ||| ||||| || |
Sbjct 2331 TCATAATCTACAATT-CCTTATTTTAACAGGCTGCAAAAAACTCAAGTCATTGCCGGAGC 2389
Query 2462 TCCCTTG-TTCGCTCGAGTGT-CTATTTGCAGAGGATTGT-ACATCACTAGAAAGAGTAA 2518
|||| | ||||||||| | | ||| ||||| ||||| | ||| |||| |||||||
Sbjct 2390 TCCCC-GATTCGCTCGAAT-TACTAAGGGCAGAAGATTGCGAG-TCATTAGAGAGAGTAA 2446
Query 2519 GTGACTCTCT-AAACATTCCAAATGCG-CAGTTCA-ATTTCATCAAAT-GCTTCACATTG 2574
||| | | || ||| | ||||| ||| | | ||| ||| || | ||| || ||| ||||
Sbjct 2447 GTGGCCC-CTTAAAAACTCCAACTGCAAC-GCTCAGATT-CA-CTAATTGCATCAAATTG 2502
Query 2575 GATAGAGAAGCACGACGAGCGATTATTCAACA--ATCGTTTGTTCATGGGAATGT--TAT 2630
| | || ||||| | ||||||||||| ||| | ||| ||||||| || | || | |
Sbjct 2503 GGTGGACAAGCAAGGCGAGCGATTAT-CAA-AGGATCATTTGTTCGCGG-A-TGGGCTCT 2558
Query 2631 CTTACCAGCAAGAGAAGTACTTGAAGAAGT-CGATTACCGAGCGAGAGGAAATTGCTTAA 2689
|||||| | | ||||| ||| | | |||| |||| |||||| |||||||||| |||||
Sbjct 2559 CTTACCCGGAGGAGAAATACCAGCA-AAGTTCGATCACCGAGTTAGAGGAAATTCCTTAA 2617
Query 2690 CAATTCCTCCTTCTGCTTTCAACAGATTTAAGGTTTGCGTTGTGTTAGTCA 2740
||||||||| |||| ||| ||||||||||||||| ||||| ||| || |||
Sbjct 2618 CAATTCCTCATTCTACTTCCAACAGATTTAAGGTGTGCGTCGTGATA-TCA 2667
> Ahg474812 jgi|Araly1|474812|fgenesh2_kg.1__4766__AT1G56540.1
Length=2883
Score = 1471 bits (796), Expect = 0.0
Identities = 1812/2284 (79%), Gaps = 144/2284 (6%)
Strand=Plus/Plus
Query 528 CAATGAAGCTAAAATGATCGAGAAGATTGCAAGAGATGTTTCAGATATACTAAACGTCAC 587
||||||||| |||||||| |||||||||||| ||||||||||||||| ||| || || ||
Sbjct 27 CAATGAAGCGAAAATGATAGAGAAGATTGCATGAGATGTTTCAGATAAACTCAATGTTAC 86
Query 588 ACCGTGTAGGGATTTTGATGGCATGGTTGGAC-TAAACGATCATTTGAGGGAAATGGAGT 646
||| | |||||||||||||||||||||||||| | || | ||||||||| |||||||||
Sbjct 87 ACCATCTAGGGATTTTGATGGCATGGTTGGACTTGAA-GCTCATTTGAGAAAAATGGAGT 145
Query 647 CTTTGCTAGATTTAAAGAATGATGGAGTTAAGATTGTTGGAATCTCTGGTCCTGCAGGCA 706
||||||| |||||| | |||||||||| ||||||||||||||||||||||||||||||||
Sbjct 146 CTTTGCTTGATTTAGATAATGATGGAGCTAAGATTGTTGGAATCTCTGGTCCTGCAGGCA 205
Query 707 TTGGTAAAAGTACCATTGCTACAGCTTTACATGGT-CGACTCTCTAACATGTTTCAGCGT 765
||||||| ||||||||||||| |||||||||| || | ||| |||| || |||||||| |
Sbjct 206 TTGGTAAGAGTACCATTGCTAGAGCTTTACATAGTGC-ACTATCTACCAGGTTTCAGCAT 264
Query 766 ACTTGTTTTGTGGACAATCTT-AGGGAAAGCTATAAGATTGGTCTTGATGAGTATCGTTT 824
| ||||||| ||||||| ||| | | ||||| ||||||||||| ||| ||||||| ||||
Sbjct 265 AATTGTTTTATGGACAACCTTCATG-AAAGCAATAAGATTGGTATTGTTGAGTATGGTTT 323
Query 825 GAAGTTGCACTTACAACAGCAACTTCTTGCATATG-TTTTAAATC-AGGATAAAATTAGG 882
|||||| | ||||||| | ||||||||| || | | |||| || | || || ||||||
Sbjct 324 GAAGTTACGCTTACAAGAACAACTTCTTTCAAA-GATTTTGAACCTAG-ATGGCATTAGG 381
Query 883 GTGGGCCATTTAAGTGTGATGA-AAGAAAGGCTTGACGACTTGAGGGTTCTTATTATTCT 941
| ||||||| | ||||||| | |||||||||| ||||| || |||||||| |||||
Sbjct 382 ATAGGCCATTCAGGTGTGAT-ACAAGAAAGGCTACACGACCAAAGAGTTCTTATCATTCT 440
Query 942 TGATGATGTGGAGCA-TCTATATCAACTAGAGGCTTTGGCTGATATCAGGTGGTTTGGTC 1000
||||||||||||| | |||| |||||||||||||||||||| |||||| |||||||||||
Sbjct 441 TGATGATGTGGAG-AGTCTAGATCAACTAGAGGCTTTGGCTAATATCATGTGGTTTGGTC 499
Query 1001 CTGGAAGTAGGGTGATAGTGACCACTGAAAACAGAGAGATTTTGCTGCAACATGGTATCA 1060
| ||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct 500 CAGGAAGTAGGGTCATAGTGACCACTGAAAACAAAGAGATTTTGCAGCAACATGGTATCA 559
Query 1061 AG-GATATATACCATGTGGGTTTTCCATCA-GAAGGAGAAGCTCTAATGATCTTTTGTCT 1118
| ||||||||||||||||||||||||||| | || ||||||| ||||||||||||||||
Sbjct 560 -GTGATATATACCATGTGGGTTTTCCATCAAGTAG-AGAAGCTTTAATGATCTTTTGTCT 617
Query 1119 ATCTGCTTTTAGACAACCCTCTCCACCTT-ATGGTTTTTTGAAGCTTACA-TATGAAGTT 1176
|||||||||| ||||| |||||||||| | ||||| | || ||| | | || |||
Sbjct 618 ATCTGCTTTTCGACAAATCTCTCCACCTGGAGGGTTTATGGAT-CTTGCGGTCGGA-GTT 675
Query 1177 GCAA-GTATTTGTGGTAATCTTCCATTGGGTCTGCATGTTTTGGGGACGTTATTGTGGGG 1235
|||| | ||||||||||||||||||||| ||| |||||||||||| | | |||| ||||
Sbjct 676 GCAAAGC-TTTGTGGTAATCTTCCATTGGCTCTACATGTTTTGGGGTCATCATTGCGGGG 734
Query 1236 AAA-AAGTCAGGCTGACTGGATTGAAGAACTACCAAGGTTGA-AAGACT-GTCTTGATGG 1292
||| || | | |||||||||| |||||||||||||| || | || ||| ||||||||||
Sbjct 735 AAAGAACT-ATTCTGACTGGATAGAAGAACTACCAAGATT-ACAA-ACTTGTCTTGATGG 791
Query 1293 AAGAATTGAGAGTGTATTGAAAGTTGGCTATGAGAGTTTATATGAGAAAGACCAAGCTCT 1352
|||||||||||||||||||||||| |||||||| |||||| |||||||||||||||| ||
Sbjct 792 AAGAATTGAGAGTGTATTGAAAGTGGGCTATGAAAGTTTACATGAGAAAGACCAAGCACT 851
Query 1353 TTTTCTCCT-CATTGCAGTCTACTTCAATTATGATTATGTTGATTATGTGACATCCATGC 1411
|||||| | |||||| |||| |||||| ||||| ||| | || |||||||||||||||
Sbjct 852 ATTTCTC-TACATTGCGGTCTTCTTCAACTATGAACATGCTAATCATGTGACATCCATGC 910
Query 1412 TAG-AAAATACTAACGTATTGGATGTTAGACTTGGGTTGAAAAA-ACTAGCTAA-T-AGA 1467
| | |||| |||||| | | | ||||||||| |||||| ||||| | || || | | |
Sbjct 911 TGGCAAAA-ACTAAC-T-T-GAATGTTAGACCTGGGTT-AAAAATATTACCTGGGTTAAA 965
Query 1468 TGTCTTATACAAATAGATAT---AGAC-CATA-ATC--G-CA--AAAG-TAGAGTCGTAA 1516
| ||| ||| |||| || | || |||| ||| | | |||| || ||| ||||
Sbjct 966 AATATTAGCCAA-TAGACATCTCATACACATAGATCATGGCGCTAAAGGTAAAGTGGTAA 1024
Query 1517 TGAACCGGTTGCTACAAGTAATGGCTCGAGAAGTTATTTCCAAACAAAAAATTTCCAAAC 1576
|| |||| |||||||||||||||||| || |||| |||||||||||| | || ||||
Sbjct 1025 TGCACCGTTTGCTACAAGTAATGGCTAGACAAGTCATTTCCAAACAAGAGCCTTGGAAAC 1084
Query 1577 GAAAGATTCTAGAAGATCCCCAGGATATTTGTTATGTTCTAGAAGAGGCA-AAGGGTAAA 1635
| ||||||| | |||| ||| || |||| |||||| | ||| | ||| |||| |||
Sbjct 1085 GCCAGATTCTTGTAGATAACCAAGAGATTTCCTATGTTTTGGAAAATGCAGAAGG-TAAT 1143
Query 1636 GGATCAGCTT-TAGG-ATTATCATTGGACGTAGCAGAGATCAA-AGAATTAGTAATAAAC 1692
|||||| || | || || ||| || ||||||| ||||||||| | ||||| | ||| |
Sbjct 1144 GGATCAA-TTGTGGGTAT-ATCCTTTGACGTAGGAGAGATCAACA-AATTAACATTAAGC 1200
Query 1693 AAAAAGGCTTTTaaaaaaaTGTGCAATCTTCTCAT-CTTAAAAGTCTT-TAATGGGACGG 1750
| ||| ||| ||| |||| ||||||| || | || |||||| || | || || ||
Sbjct 1201 GCTAGGGCGTTTGAAAGAATGCACAATCTTTTCTTACT-AAAAGT-TTATGATCGGT-GG 1257
Query 1751 ATCCCCG-AGATAGTA-AATTGCACGTACCAGAGGAGATGGAGCTTCCATC-TAGCATAA 1807
| | | | | || | || ||||| | |||||||||||||| ||| || | || |||
Sbjct 1258 CTTACTGGAAAAAG-ACAACTGCACATTCCAGAGGAGATGGATTTTCT-TCCTCGCCTAA 1315
Query 1808 GGTTACTACATTGGGAGGCATACCCGAGAAA-A-TCTT--T--TAGATTTGGTCCAGAAA 1861
||||||||| |||||| ||||||| |||||| | |||| | ||||||| | |||||||
Sbjct 1316 GGTTACTACGTTGGGATGCATACCAGAGAAAGAGTCTTCCTCGTAGATTTTGCCCAGAAA 1375
Query 1862 ATCTCGTC-ACACT-CAACATGGAGTACAGTGAGCTCGAGAAGCTATGGAAAGGAACTCA 1919
|||| ||| | ||| || |||| | | || ||||||||||||||||| | ||||||||
Sbjct 1376 ATCTAGTCGA-ACTACA-CATGCCGGATAGCCAGCTCGAGAAGCTATGGGACGGAACTCA 1433
Query 1920 GCCACTTGC-AAATCTCAAGGAGATGAACTTGTGTGGGTCATCTTGTTTGAAGGAACTCC 1978
||| ||| | |||||||| | |||||||||| | |||||||||||||||||| |||| |
Sbjct 1434 GCCGCTT-CTAAATCTCACGAAGATGAACTTCAGAGGGTCATCTTGTTTGAAGAAACTTC 1492
Query 1979 CAGATCTTTCGAAA-GCAGCAAATCTGGAGAGATTGGATGTGGCTGAGTGCAATGCTTTG 2037
|||||||||| ||| || ||||||| |||||||||||| || ||| |||| |||||||
Sbjct 1493 CAGATCTTTC-AAATGCTTCAAATCTTGAGAGATTGGATCTGTATGAATGCATTGCTTTG 1551
Query 2038 GTAGAGATTCCATCCTCAGTTGCGAATCTTCACAAAATAGT-TAACTTACACATGGAATC 2096
|||||| ||||||||||| || | ||||||| ||| || || |||| | | | ||||
Sbjct 1552 GTAGAGCTTCCATCCTCAATTTCTAATCTTCGTAAACTAAACTA-CTTAGAGACG-AATC 1609
Query 2097 CTGTG-A-AAGTCTAGAAGTCATTCCAACTCTCATCAACTTGGCATCTCTTAA-GATTAT 2153
| || | ||||||| ||||||||||||||||||| |||||||||| |||||| || ||
Sbjct 1610 TT-TGCAGAAGTCTACAAGTCATTCCAACTCTCATTAACTTGGCATTTCTTAAAGAG-AT 1667
Query 2154 CAACATACATG--ATTGCCCACGGTTGAAAAGTTTTCCAGATGTTCCCACCAGCCTCGAG 2211
||| || ||| || || |||| |||| ||||||||||||| |||| |||| | || |
Sbjct 1668 CAAGATG-ATGGGAT-GCTCACGATTGAGAAGTTTTCCAGATATTCCTACCAACATC-AT 1724
Query 2212 GAAC-T-TGTG-A-TAGAGAAAACAGGGGTACAAGAATTGCCTGCATCATTTAGGCATTG 2267
||| | | || | | |||| || ||| |||| ||||| || |||||| |||||||||
Sbjct 1725 TAACCTCTCTGTAATGGAGACAA-AGGT-TACA-GAATTTCCCGCATCACTTAGGCATTT 1781
Query 2268 CACTGGTG-TTACTACTCTTT--ATATATGTTCCAATAG-AAATCTCAAGACCTTCTCAA 2323
| | | | || | ||||| ||||| || | | | ||||||||||||||| ||||
Sbjct 1782 CTC-GCTTCTTG--AGTCTTTCGATATAAGTGGGAGT-GTAAATCTCAAGACCTTTTCAA 1837
Query 2324 CACATCTCCCCA-TGG-GTC-TAAG-GAAGCTAGACCTA-AGCAATTGTGGTATTGAGTG 2378
|||||||||||| || || ||| || ||| ||||| | |||| ||||||||||| |
Sbjct 1838 CACATCTCCCCACTGTTGTTGTAACAGA-GCTTCACCTAGA-CAATAGTGGTATTGAGAG 1895
Query 2379 GGTTACAGATAGCATCAAAGATCTTCATAATCTATAT-TACCTTAAACTATCAGGCTGCA 2437
|||||||| |||||| || ||||||||||||| | | |||| |||||| ||| |
Sbjct 1896 TATTACAGATTGCATCAGAGGTCTTCATAATCTACGTGT-CCTTGCTCTATCAAACTGTA 1954
Query 2438 AAAGACTTGTGTCTTTGCCAGAA-CTCCCTTGTTCGCTCGAGTGTCTATTTGC-AGAGGA 2495
||| ||| ||| ||||| ||| ||||| |||| ||| | || ||| || | | |
Sbjct 1955 AAAAACTCAAGTCATTGCC-GAAGCTCCCGAGTTCACTCAAATGGCTACGGGCTA-ACCA 2012
Query 2496 TTGT-ACATCACTAGAAAGAGTAAGTGA-CTCTCTAAACATTCCAAATGC-G-CAGTTCA 2551
|||| | |||||| || ||||||||||| | || |||||| |||||||| | | || |
Sbjct 2013 TTGTGA-ATCACTGGAGAGAGTAAGTGAAC-CTTTAAACACACCAAATGCAGACC-TTGA 2069
Query 2552 ATTTCATCAAATGCTTCACATTGGATAGAGAAGCACGACGAGCGATTATTCAACAATCGT 2611
||||| ||| ||||||| ||||| | || | ||||||||||||||| ||||||||| ||
Sbjct 2070 -TTTCAGCAACTGCTTCAAATTGGGTCGACAGGCACGACGAGCGATTTTTCAACAATGGT 2128
Query 2612 TTGTTCATGGGAATGTTATCTTACCAGCAAGAGAAGTACTTGAAGAAGT-CGATTACCGA 2670
||||| ||||| | | ||||||||| |||| |||||| || | || |||| | |||
Sbjct 2129 TTGTTGATGGGCGGGCTCTCTTACCAGGAAGAAAAGTACCTGCACT-GTTCGATCATCGA 2187
Query 2671 GCGAGAGGAAATTGC-TTAACAATTCCTCCTTCTGCTTTCAACAGATTTAAGGTTTGCGT 2729
|| |||||||||| | |||||||||||| |||||||| | | || |||||||||||
Sbjct 2188 GCCAGAGGAAATT-CATTAACAATTCCTAATTCTGCTT-C--CT-AT--AAGGTTTGCGT 2240
Query 2730 TGTG 2733
||||
Sbjct 2241 TGTG 2244
Score = 78.7 bits (42), Expect = 3e-13
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 2892 CATTATTGAATGTGGTGTCCAGATCTTGATGGACGAAACGGACGGAAGCAACAAAGGGTT 2951
||||||||||||||||||||||||||||| ||| ||||| || |||| |||||| |||
Sbjct 2484 CATTATTGAATGTGGTGTCCAGATCTTGACGGATGAAACAGATGGAAACAACAATGGGGG 2543
Query 2952 ATTTGAAAATGTAGA 2966
|| |||| ||| |||
Sbjct 2544 ATCTGAAGATGAAGA 2558
> Ahg907275 jgi|Araly1|907275|Al_scaffold_0002_356
Length=3087
Score = 826 bits (447), Expect = 0.0
Identities = 1096/1400 (78%), Gaps = 81/1400 (6%)
Strand=Plus/Plus
Query 55 ATGGCTTCTTCTTC-TT-CCTCACCTCGCAACTGGAGATACAATGTCTTCACGAGCTTCC 112
||||||| |||||| || ||| | ||| | ||||| |||| |||||| | |||||||
Sbjct 1 ATGGCTTGTTCTTCTTTGCCT--CTTCGTATCTGGACATACCGCGTCTTCGCTAGCTTCC 58
Query 113 ATGGACCAGACGTCCGTATTAA-ATTTCTCAGTCATTTACGTC-AACAGTTTATTTACAA 170
|||||||||||||||||| || ||||||| ||||||||| | |||| |||| |||||
Sbjct 59 ATGGACCAGACGTCCGTA-AAACATTTCTCTCTCATTTACG-CAAACAATTTAACTACAA 116
Query 171 TGGAATTACTATGTTCGATGA-CAACGGGATCGAAAGAAGCCAAATTATCGCTCCAGCTC 229
|| ||||| ||||||||||| ||| |||||||| |||||||||| ||||| || || |
Sbjct 117 CGGGATTACGATGTTCGATGATCAA-GGGATCGAGAGAAGCCAAACCATCGCCCCTGCAC 175
Query 230 TCAAAAAAGCCATTGGAGAATCGAGGATCGCGATCTTATTGCTCTCGAAGAACTATGCTT 289
||| | ||| ||| | |||||||||||||| ||| | ||||||| |||||||||||||
Sbjct 176 TCACACGAGCAATTAGTGAATCGAGGATCGCAATCGTGGTGCTCTCCAAGAACTATGCTT 235
Query 290 CTTCCAGTTGGTCTTTGGATGAGCTATTGGAGATTTTAAAGTGCAAAGAAGATATAGGGC 349
| || ||||||| ||||||||| | |||||||||| |||||||| ||||||| |||||
Sbjct 236 CATCGAGTTGGTGTTTGGATGAATTGGTGGAGATTTTGAAGTGCAAGGAAGATAGAGGGC 295
Query 350 AAATAGTGATGACTGTCTTCTACGAAGTTGATCCTTC-TGATGTCCGCAACCAAACCGGA 408
|||||||||||||||||||||||| ||| ||||| | |||||| || || || ||||||
Sbjct 296 AAATAGTGATGACTGTCTTCTACGGAGTAGATCC-ACATGATGTGCGTAAACAGACCGGA 354
Query 409 GATTTTGGGATTGCTTTTAAAGAAACTTGTGCTCATAAAACAGAGGAGGAGAGGCAAAAA 468
||||||||| |||||| || || |||||||||| |||||| ||||||||||| | ||||
Sbjct 355 GATTTTGGGCGTGCTTTCAATGAGACTTGTGCTCGTAAAACGGAGGAGGAGAGACGAAAA 414
Query 469 TGGACCCAAGCTTTGACCTATGTGGGCAACATTGCCGGAGAAGACTT-TAAACACTGGCC 527
|||| ||||||||||||||||||||| ||||| ||||||||| |||| || |||||
Sbjct 415 TGGAGCCAAGCTTTGACCTATGTGGGTAACATAGCCGGAGAACACTTCCGAA-ACTGGGA 473
Query 528 CAATGAAGCTAAAATGATCGAGAAGATTGCAAGAGATGTTTCAGATATACTAAACG-TCA 586
||||||||| ||||||||||||||||||||||||||||||||||||| | | || | | |
Sbjct 474 CAATGAAGCCAAAATGATCGAGAAGATTGCAAGAGATGTTTCAGATAAAGTGAATGCT-A 532
Query 587 CACCGTGTAGGGATTTTGATGGCATGGTTGGACTAAACGA-TCATTTGAGGGAA--ATGG 643
|||| | || |||||||||| |||||||||||| | || ||||||||| || |||
Sbjct 533 CACCATCAAGAGATTTTGATGACATGGTTGGACTTGA-GACTCATTTGAG--AATGATGC 589
Query 644 AGTCTTTGCTAGATTTAAAGAATGATGGAGTTAAGATTGTTGGAATCTCTGGTCCTGCAG 703
||||||||||||||||| | ||||||||||||| ||| |||||||| |||||||| ||||
Sbjct 590 AGTCTTTGCTAGATTTAGATAATGATGGAGTTATGATGGTTGGAATATCTGGTCCGGCAG 649
Query 704 GCATTGGTAAAAGTACCATTGCTACAGCTTT-ACATGGTCGACTCTCTAACATGTTTCAG 762
|||||||||| | ||||||||||| |||||| | | || | |||| || | |||||||
Sbjct 650 GCATTGGTAAGACTACCATTGCTAGAGCTTTGAAAAA-TCTATTCTCCAATAGGTTTCAG 708
Query 763 CGTACTTGTTTTGTGGACAATCTT-AGGGAAAGCTATAAGATTGGTCTTGATGAGTATCG 821
| || ||||||| ||||||| ||| |||| ||||||| |||||| |||| |||||| |
Sbjct 709 CTTAGTTGTTTTATGGACAA-CTTTAGGGGAAGCTATCCCATTGGTTTTGACGAGTATGG 767
Query 822 TTTGAAGTTGCACTTACAACA-GCAACTTCT-TGCATATG-TTTTAAATCAGGATAAAAT 878
||| ||||||| |||||| | | | || || | || | | |||| || || || ||
Sbjct 768 TTTTAAGTTGCGTTTACAAGAAG-AGCTGCTAT-CAAA-GATTTTGAACCAAAATGGTAT 824
Query 879 TAGGGTGGGCCATTTAAGTGTGATGA-AAGAAAGGCT-TGACGACTTGAGGGTTCTTATT 936
||| | ||||||| |||| || | ||||||| || || ||| ||| || |||||
Sbjct 825 GAGGATCTCCCATTTAGGTGTAAT-ACAAGAAAGACTATGT-GACATGAAAGTGCTTATC 882
Query 937 ATTCTTGATGATGTGGA-GCATCTATATCAACTAGAGGCTTTGGCTGAT-A---T-CAGG 990
||||||||||||||| | | || || | ||| |||||||||||| | || | | ||
Sbjct 883 ATTCTTGATGATGTGAATG-ATGTAAAGCAATTAGAGGCTTTGGTTAATGAAAATTCA-- 939
Query 991 TGGTTTGGTCCTGGAAGTAGGGTGATAGTGACCACTGAAAACAGAGAGATTTTGCTGCAA 1050
||||| || |||||||||||| | || ||||| |||||||||| ||||||||||| || |
Sbjct 940 TGGTTCGGCCCTGGAAGTAGGATTATTGTGACAACTGAAAACAAAGAGATTTTGCAGCGA 999
Query 1051 CATGGTATCAAGGATATATACCATGT-GGGTTTTCCATCAGAAGGAGAAGCTCT-AATGA 1108
||||||||| | | | ||| |||| |||||| |||||||| | ||||||||| || ||
Sbjct 1000 CATGGTATCGACAACGTGTACAATGTCGGGTTT-CCATCAGATGAAGAAGCTCTCAA-GA 1057
Query 1109 TCTTTTGTCTATCTGCTTTTAGACAACCCTCTCCACCTTATGGTTTTTTGAA-GCTTACA 1167
|||| ||| || |||||||| |||| ||||||| | || |||||| || | | ||
Sbjct 1058 TCTTATGTAGATATGCTTTTAAACAAAGCTCTCCATGTCATAATTTTTT-AATGATGGCA 1116
Query 1168 TA-TGAAGTTGCA-AGTATTTGTGGTAATCTTCCATTGGGTCTGCATGTTTTGGGG--A- 1222
| || || ||| | ||||||| ||||||||||||||||| | ||| |||| |
Sbjct 1117 AAATGG-GTAGCACAAC-TTTGTGGGAATCTTCCATTGGGTCTACGTGTGGTGGGCTCAT 1174
Query 1223 CGTTATTGTGGGGAAAAAGTCAGG-CTGACTGGAT-TGA-AGAACTACCAAGGTT-GAAA 1278
| ||| |||| || || | ||| | || |||| | | | | || ||| | ||||
Sbjct 1175 CTTTACA-TGGG-AAGAA-TGAGGAC-GAATGGAAAT-ATATAG-TAAGGAGGCTAGAAA 1228
Query 1279 GACTGTCT-TG-ATGGA-AGAATTGAG-AGTGTATTGAA-AGTTGGCTATGAGAGTTTAT 1333
|| | | || ||||| ||| | ||| | ||| | || ||| || ||||||||||||
Sbjct 1229 --CTAT-TATGGATGGAGAGA-TCGAGGAA-GTACT-AAGAGTCGGTTATGAGAGTTTAC 1282
Query 1334 ATGAGAAAGACCAAGCTCTTTTTCTCCTCATTGCAGTCTACTTCAATTATGATTATGTTG 1393
||||||| || ||| | || ||||||| ||||||||||| |||||| ||||| | | ||
Sbjct 1283 ATGAGAATGAGCAAACACTATTTCTCCACATTGCAGTCTTCTTCAACTATGAAGACGGTG 1342
Query 1394 AT-TATGTGACATCCATGCT 1412
|| | ||||| | |||||||
Sbjct 1343 ATCT-TGTGAAAGCCATGCT 1361
> Ahg907022 jgi|Araly1|907022|Al_scaffold_0002_103
Length=2805
Score = 435 bits (235), Expect = 1e-120
Identities = 463/572 (81%), Gaps = 20/572 (3%)
Strand=Plus/Plus
Query 59 CTTCTTCTTCTTCCTCACCTCGCAACTGGAGATACAATGTCTTCACGAGCTTCCATGGAC 118
||||||||||||| || |||||| |||||||||| ||||||||||||||||||||||
Sbjct 8 CTTCTTCTTCTTCTTCGTCTCGCACCTGGAGATACCGCGTCTTCACGAGCTTCCATGGAC 67
Query 119 CAGACGTCCGTATTAAA--TTTCTCAGTCATTTACGTCAACAGTTTATTTACAATGGAAT 176
|||||||||| | ||| |||||||| |||||||| || ||||||| | ||||| ||
Sbjct 68 CAGACGTCCGCA--AAACCTTTCTCAGCCATTTACGAAAAGAGTTTATCTGTAATGGGAT 125
Query 177 TACTATGTTCGATGA-CAACGGGATCGAAAGAAGCCAAATTATCGCTCCAGCTCTCAAAA 235
|| ||||| ||||| ||| |||||||| ||| | |||| || | |||| || | |
Sbjct 126 CACCATGTTTGATGATCAA-GGGATCGAGAGAGGTCAAACCATTTCCCCAGAACTTACAC 184
Query 236 AAGCCATT-GGAGAATCGAGGATCGCGATCTTATTGCTCTCGAAGAACTATGCTTCTTCC 294
||| || || |||||||||||| | || | || || || ||||| ||||||||||||
Sbjct 185 AAGGGATCAGG-GAATCGAGGATCTCTATAGTCTTACTATCAAAGAATTATGCTTCTTCC 243
Query 295 AGTTGGTCTTTGGATGAGCTATTGGAGATTTTAAAGTGCAAAGAAGATATAGGG-CAAAT 353
|| |||| | |||||||||| ||||||||||| |||||||| |||||||| ||| |||||
Sbjct 244 AGCTGGTGTCTGGATGAGCTGTTGGAGATTTTGAAGTGCAAGGAAGATAT-GGGACAAAT 302
Query 354 AGTGATGACTGTCTTCTACGAAGTTGATCCTTCTGATGTCCGCAACCAAACCGGAGATTT 413
|||||||||||||||||||| ||| |||| |||||||| || || || || ||||| ||
Sbjct 303 AGTGATGACTGTCTTCTACGGAGTAAATCCATCTGATGTGCGGAAACAGACAGGAGAATT 362
Query 414 TGGGATTGCTTTTAAAGAAACTTGTGCTCATAAAACAGAGGAGGAGAGGCAAAAATGGAC 473
||| || ||||| | |||||||||||| ||||||||| |||||||||| ||||||||
Sbjct 363 TGGTATGGCTTTCACTCAAACTTGTGCTCGTAAAACAGAAGAGGAGAGGCGAAAATGGAG 422
Query 474 CCAAGCTTTGACCT-ATGTGGGCAACATTGCCGGAGAAGACTT--TAAACACTGGCCCAA 530
||||||||||| | ||||||||||||| ||||||||| |||| ||||| ||| ||
Sbjct 423 CCAAGCTTTGAA-TGATGTGGGCAACATAGCCGGAGAACACTTCCTAAAC--TGGGATAA 479
Query 531 TGAAGCTAAAATGATCGAGAAGATTGCAAGAGATGTTTCAGATATACTAAACG-TCACAC 589
|||| | || ||||| || |||||||| || ||||||||| | | |||||||| | ||||
Sbjct 480 TGAATCGAAGATGATTGAAAAGATTGCTAGGGATGTTTCAAACAAACTAAACGCT-ACAC 538
Query 590 CGTG-TAGGGATTTTGATGGCATGGTTGGACT 620
| || |||||||||||| | |||||| |||||
Sbjct 539 C-TGCTAGGGATTTTGAAGACATGGTGGGACT 569
Score = 67.6 bits (36), Expect = 6e-10
Identities = 41/43 (95%), Gaps = 1/43 (2%)
Strand=Plus/Plus
Query 2889 TCG-CATTATTGAATGTGGTGTCCAGATCTTGATGGACGAAAC 2930
||| |||||||||||||||||||||||||||||||||| ||||
Sbjct 2750 TCGACATTATTGAATGTGGTGTCCAGATCTTGATGGACAAAAC 2792
> Ahg914939 jgi|Araly1|914939|Al_scaffold_0001_5193
Length=2436
Score = 405 bits (219), Expect = 1e-111
Identities = 368/439 (84%), Gaps = 14/439 (3%)
Strand=Plus/Plus
Query 789 GGAAAGCTATAAGATTGGTCTTGATGAGTATCGTTTGAAGTTGCACTTACAACAGCAACT 848
||||| ||||||||||||| ||| ||||||| |||||||| ||| ||||||| |||||||
Sbjct 162 GGAAAACTATAAGATTGGTTTTGGTGAGTATGGTTTGAAGCTGCGCTTACAAGAGCAACT 221
Query 849 TCTTGCATATG-TTTTAAATCAGGATAAAATTAGGGTGGGCCATTTAAGTGTGATGA-AA 906
|||| || | | |||| || || || || ||| | | ||||||| ||||||| | ||
Sbjct 222 TCTTTCA-AAGATTTTGAACCAAAATGGTATGAGGATAGACCATTTAGGTGTGAT-ACAA 279
Query 907 GAAAGGCTTGACGACTTGAGGGTTCTTATTATTCTTGATGATGTGGAGCA-TCTATATCA 965
|||||||| ||||| || ||||||||| |||||||||||||||||| | |||| ||||
Sbjct 280 GAAAGGCTACACGACCAGAAGGTTCTTATCATTCTTGATGATGTGGAG-AGTCTAGATCA 338
Query 966 ACTAGAGGCTTTGGCTGATATCAGGTGGTTTGGTCCTGGAAGTAGGGTGATAGTGACCAC 1025
||| || || |||||| |||| |||||||||||| ||||||||||||| |||||||||||
Sbjct 339 ACTTGATGCGTTGGCTAATATGAGGTGGTTTGGTGCTGGAAGTAGGGTCATAGTGACCAC 398
Query 1026 TGAAAACAGAGAGATTTTGCTGCAACATGGTATCAAG-GATATATACCATGTGGGTTTTC 1084
|||||||| ||| ||||||| ||| |||||| | || | || ||| || ||||| ||||
Sbjct 399 TGAAAACAAAGAAATTTTGCAGCAGCATGGTGT-TAGCGCTACATATCAAGTGGGGTTTC 457
Query 1085 CATCAGAAGGAGAAGCTCTAATGATCTTTTGTCTATCTGCTTTTAGACAACCCTCTCCAC 1144
|||||||| ||||||||||||||||||||||||||||||||||||||||| | | |||||
Sbjct 458 CATCAGAAAGAGAAGCTCTAATGATCTTTTGTCTATCTGCTTTTAGACAAACTTTTCCAC 517
Query 1145 CTTATGGTTTTTTGAAGCT-TA-CATATGAAGTTGCAA-GTATTTGTGGTAATCTTCCAT 1201
|| |||| ||| | | ||| | | |||||||||||| | |||||||||||||||||||
Sbjct 518 CTCATGGATTTAT-A-GCTCTTGCGGATGAAGTTGCAACG-ATTTGTGGTAATCTTCCAT 574
Query 1202 TGGGTCTGCATGTTTTGGG 1220
||| |||||||||||||||
Sbjct 575 TGGCTCTGCATGTTTTGGG 593
Score = 152 bits (82), Expect = 2e-35
Identities = 124/144 (86%), Gaps = 4/144 (3%)
Strand=Plus/Plus
Query 2580 AGAAGCACGACGAGCGATTATTCAACAATCGTTTGTTCATGGGAATGT-TATCTTACCAG 2638
||||||||||||||||||||||||||||| ||||||| | ||| || |||||||||||
Sbjct 1710 AGAAGCACGACGAGCGATTATTCAACAATTGTTTGTTTACGGGT-TGGCTATCTTACCAG 1768
Query 2639 CAAGAGAAGTACTTGAAGAAGT-CGATTACCGAGCGAGAGGAAATTGCTTAACAATTCCT 2697
||||||||| | || ||| || |||| |||| || |||||||||| ||||||| ||| |
Sbjct 1769 GAAGAGAAGTGCCTGCAGA-GTTCGATCACCGTGCCAGAGGAAATTCCTTAACAGTTCAT 1827
Query 2698 CCTTCTGCTTTCAACAGATTTAAG 2721
| ||||||||||||||||||||||
Sbjct 1828 CATTCTGCTTTCAACAGATTTAAG 1851
> Ahg907475 jgi|Araly1|907475|Al_scaffold_0002_556
Length=3114
Score = 196 bits (106), Expect = 7e-49
Identities = 335/440 (76%), Gaps = 38/440 (9%)
Strand=Plus/Plus
Query 1775 TACCAGAGGAGATGGAGCTT-CCATCTAG-CATAAGGTTACTACATTGGGAGGCATACCC 1832
|||||||||| || || || ||| || | | ||| ||||||||||||||||||||||||
Sbjct 1703 TACCAGAGGACTTGCAG-TTCCCACCTCGTC-TAAAGTTACTACATTGGGAGGCATACCC 1760
Query 1833 GAGAAA-A-TCTT--T-T-AGATTTGGTCCAGAAAATCTCGTC-ACACTCAACATGGAGT 1885
|||||| | |||| | | |||||| || ||||||||||| | |||| | ||| ||
Sbjct 1761 GAGAAAGAGTCTTCCTATTAGATTTTATCTGGAAAATCTCGTTGA-ACTCGATATGCAGA 1819
Query 1886 ACAGTGAGCTCGAGAAGCTATGGAAAGGAACTCAGCCACTTGCAAATCTCAAGGAGATGA 1945
| || | ||||||||||| ||||||||| | |||| ||| ||||||||||| |||||
Sbjct 1820 ATAGCCAACTCGAGAAGCTCTGGAAAGGACCCCAGCTGCTTACAAATCTCAAGAAGATGG 1879
Query 1946 ACTTGT-G-TGGGTCATCTTGTTTGAAGGAACTCCCAGATCTTTCGAAAGC-AGCAAATC 2002
| |||| | || | || | || ||| ||||||||||||||||| || || | ||||||
Sbjct 1880 ATTTGTCGATGTCCCGTCAT-TT-GAAAGAACTCCCAGATCTTTCCAATGCCA-CAAATC 1936
Query 2003 TGGAGAGATTGGATGTGGCTGAGTGC-A-ATGCTTTGGTAGAGATTCCATCCTCAGTTGC 2060
| |||||||| || | | ||| ||| | | | ||||||||||||||| ||||| || |
Sbjct 1937 TCAAGAGATTGAATTTAGATGATTGCGAGA-G-TTTGGTAGAGATTCCCTCCTCTTTTTC 1994
Query 2061 GAATCTTCACAAAATAGTTAACT-TACA-CATGGAAT-CCTGT--GAAAGTCTAGAAGTC 2115
|||||||||||| || || | | | |||| | |||| ||| || ||||||||
Sbjct 1995 AAATCTTCACAAACTAA--AAGTGTTGAGCATGTT-TGCCTGCACGAA-GT-TAGAAGTC 2049
Query 2116 ATTCCAACTCTCATCAACTTGGCATCTCTTAAGATTA-TCAACAT-ACATG-ATTGCCCA 2172
|||||||||| ||| ||||||||||||||| | || | |||| || || | || ||| |
Sbjct 2050 ATTCCAACTCGCATGAACTTGGCATCTCTTGA-ATCAGTCAATATGACG-GCAT-GCCAA 2106
Query 2173 CGGTTGAAAAGTTTTCCAGA 2192
| ||||||| ||||||||
Sbjct 2107 AGATTGAAAAACTTTCCAGA 2126
> Ahg493465 jgi|Araly1|493465|fgenesh2_kg.7__2898__AT4G14370.1
Length=5602
Score = 159 bits (86), Expect = 1e-37
Identities = 362/489 (74%), Gaps = 43/489 (9%)
Strand=Plus/Plus
Query 1892 AGCTCGAGAAGCTATGGAAAGGAACTCAGCCACTTGCAAATCTCAAGGAGATGAACTTGT 1951
|||| |||| ||| ||| ||||||| ||||||||| ||||||||||| ||||| | |||
Sbjct 1424 AGCTTGAGAGGCTTTGGCAAGGAACACAGCCACTTACAAATCTCAAGAAGATGGATTTGA 1483
Query 1952 GTGGGTCATCTTGTTTGAAGGAACTCCCAGATCTTTCGAAA-GC-AGCAAATCTGGAGAG 2009
| || ||| |||||||||||| ||||||||||| ||| || | ||||||| |||||
Sbjct 1484 CACGATCTTCTCATTTGAAGGAACTTCCAGATCTTTC-AAATGCTA-CAAATCTCGAGAG 1541
Query 2010 ATTGGATGT-GGCTGAGTGCAATG-CTTTGGTAGAGATTCCATCCTCAGTTGC-GAATCT 2066
|||||| | | | | ||||| | |||||| |||||||| ||||| || | ||| ||
Sbjct 1542 ATTGGAACTAAG-TTATTGCAA-GAGTTTGGTGGAGATTCCTTCCTCTTTTTCGGAA-CT 1598
Query 2067 TCACAAAA-TAGTTA-AC-TT-ACACATGGA-ATCCTG-TGAAAGTCTAGAAGTCATTCC 2120
|| |||| ||| | || || | | || | | ||| |||| |||||||| ||||
Sbjct 1599 TC-GAAAACTAG--AGACGTTGATA-ATACACA-ACTGCACAAAG-CTAGAAGTTGTTCC 1652
Query 2121 AACTCTCATCAACTTGGCATCTCTTAAGATTA--TCAACATACATGATTGCCCACGGTTG 2178
||||||||||||||||||||||||| |||| || |||| || | |||| ||| ||
Sbjct 1653 AACTCTCATCAACTTGGCATCTCTT--GATTTCGTCGACATGCAAGGTTGCTCACAATTA 1710
Query 2179 AAAAGTTTTCCAGATGTTCC--CAC-CAGCCTCGAGGAACTTGTGATAGA-GAAAACAGG 2234
|||||| |||||| | || | ||| || | || | | || || ||||| || | |||
Sbjct 1711 AAAAGTCTTCCAGGTATTTCTACACACATC-TCAAT-A-CTCGTTATAGATGACA-CAGT 1766
Query 2235 GGTACAAGAATTGCCTGCATCATTTAGGCATTGCACTGGTGTTAC-TA-CTCTTTATATA 2292
| || ||||| ||||| ||||| | | | ||||||| || |||| | ||||||||| |
Sbjct 1767 GTTAGAAGAACTGCCTACATCAATCATACTTTGCACTCGTCTTACGTCTCTCTTTATAAA 1826
Query 2293 TGTTCCAATAGAAA-TCTCAAGACCTTCTCAACACATCTCCCCATGGGTCTAAGGAAGCT 2351
| | | | |||| | | ||||| || ||||| |||||| ||| |||||| | | ||
Sbjct 1827 AGG-C-AGTGGAAACTTT-AAGACATT---AACACCTCTCCCTATGAGTCTAAAGTATCT 1880
Query 2352 AGACCTAAG 2360
|||||||||
Sbjct 1881 AGACCTAAG 1889
> Ahg924354 jgi|Araly1|924354|scaffold_105635.1
Length=448
Score = 78.7 bits (42), Expect = 3e-13
Identities = 53/58 (91%), Gaps = 1/58 (2%)
Strand=Plus/Plus
Query 2889 TCG-CATTATTGAATGTGGTGTCCAGATCTTGATGGACGAAACGGACGGAAGCAACAA 2945
||| ||||||||||||||||||||||||||||||||| ||||| || ||||| |||||
Sbjct 223 TCGACATTATTGAATGTGGTGTCCAGATCTTGATGGATGAAACAGATGGAAGTAACAA 280
> Ahg907021 jgi|Araly1|907021|Al_scaffold_0002_102
Length=2829
Score = 62.1 bits (33), Expect = 3e-08
Identities = 48/55 (87%), Gaps = 2/55 (4%)
Strand=Plus/Plus
Query 2889 TCG-CATTATTGAATGTGGTGTCCAGATCTTGATGGACGAAACGGACGGAAGCAA 2942
||| ||||||||||||||||||||||||||||| || ||||| ||| || ||||
Sbjct 2681 TCGACATTATTGAATGTGGTGTCCAGATCTTGACGGTTGAAACCGACAGA-GCAA 2734
> Ahg337990 jgi|Araly1|337990|fgenesh1_pg.C_scaffold_2000089
Length=822
Score = 62.1 bits (33), Expect = 3e-08
Identities = 35/36 (97%), Gaps = 0/36 (0%)
Strand=Plus/Plus
Query 2892 CATTATTGAATGTGGTGTCCAGATCTTGATGGACGA 2927
||||||||||||||||||||||||||||| ||||||
Sbjct 501 CATTATTGAATGTGGTGTCCAGATCTTGACGGACGA 536
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 136893090081
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5