BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G56540.1
Length=3291
Score E
Sequences producing significant alignments: (Bits) Value
Ahg474812 jgi|Araly1|474812|fgenesh2_kg.1__4766__AT1G56540.1 3751 0.0
Ahg914947 jgi|Araly1|914947|Al_scaffold_0001_5201 2032 0.0
Ahg914939 jgi|Araly1|914939|Al_scaffold_0001_5193 538 1e-151
Ahg914952 jgi|Araly1|914952|Al_scaffold_0001_5206 374 3e-102
Ahg337990 jgi|Araly1|337990|fgenesh1_pg.C_scaffold_2000089 78.7 3e-13
> Ahg474812 jgi|Araly1|474812|fgenesh2_kg.1__4766__AT1G56540.1
Length=2883
Score = 3751 bits (2031), Expect = 0.0
Identities = 2612/2881 (91%), Gaps = 85/2881 (3%)
Strand=Plus/Plus
Query 476 GGGACAATGAAGCGAAGATGATAGAGAAGATTGCAAGTGATGTTTCAGATAAACTCAATA 535
|||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||
Sbjct 23 GGGACAATGAAGCGAAAATGATAGAGAAGATTGCATGAGATGTTTCAGATAAACTCAATG 82
Query 536 CCACACCGTCTAGGGATTTTGATGGCATGATTGGACTTGAAGCTCATTTGAGAAAAATAG 595
||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |
Sbjct 83 TTACACCATCTAGGGATTTTGATGGCATGGTTGGACTTGAAGCTCATTTGAGAAAAATGG 142
Query 596 AGTCTTTGCTTGATTTAGATTATGATGGAGCTAAGATTGTTGGAATCTCTGGTCCTGCAG 655
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 143 AGTCTTTGCTTGATTTAGATAATGATGGAGCTAAGATTGTTGGAATCTCTGGTCCTGCAG 202
Query 656 GCATTGGTAAGAGTACCATTGCCAGAGCTTTACATAGTGTACTATCTAAAC-GGTTTCAG 714
|||||||||||||||||||||| |||||||||||||||| ||||||| | | ||||||||
Sbjct 203 GCATTGGTAAGAGTACCATTGCTAGAGCTTTACATAGTGCACTATCT-ACCAGGTTTCAG 261
Query 715 CATAATTGTTTTATGGACAACCTTCATGAAAGCTATAAGATTGGTCTTGTTGAGTATGGT 774
||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct 262 CATAATTGTTTTATGGACAACCTTCATGAAAGCAATAAGATTGGTATTGTTGAGTATGGT 321
Query 775 TTGAGGTTGCGGTTACAAGAGCAACTTCTTTCAAAGATTTTGAACCTAGATGGCATTAGG 834
|||| ||| || |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 322 TTGAAGTTACGCTTACAAGAACAACTTCTTTCAAAGATTTTGAACCTAGATGGCATTAGG 381
Query 835 ATAGCCCATTTAGGTGTGATACGAGAGAGGCTACACGACCAGAAG-GTTCTTATCATTCT 893
|||| ||||| ||||||||||| ||| |||||||||||||| ||| ||||||||||||||
Sbjct 382 ATAGGCCATTCAGGTGTGATACAAGAAAGGCTACACGACCA-AAGAGTTCTTATCATTCT 440
Query 894 TGATGATGTGGAGAGTCTAGATCAACTTGATGCTTTGGCTAATATCGA-GTGGTTTGGTC 952
||||||||||||||||||||||||||| || ||||||||||||||| | |||||||||||
Sbjct 441 TGATGATGTGGAGAGTCTAGATCAACTAGAGGCTTTGGCTAATATC-ATGTGGTTTGGTC 499
Query 953 CTGGAAGTAGGGTCATAGTGACCACTGAAAACAAAGAGATTTTACAGCAACATGGTATCA 1012
| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 500 CAGGAAGTAGGGTCATAGTGACCACTGAAAACAAAGAGATTTTGCAGCAACATGGTATCA 559
Query 1013 GTGATATATACCACGTGGGTTTTCCATCAAGTAAAGAAGCTTTAATGATCTTTTGTCTAT 1072
||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 560 GTGATATATACCATGTGGGTTTTCCATCAAGTAGAGAAGCTTTAATGATCTTTTGTCTAT 619
Query 1073 CCGCTTTTAGACAACTCTCTCCACCT-GATCGGTTTATGAATCTTGCTGCT-GAAGTTGC 1130
| |||||| ||||| ||||||||||| || |||||||| ||||||| | | | ||||||
Sbjct 620 CTGCTTTTCGACAAATCTCTCCACCTGGA-GGGTTTATGGATCTTGC-GGTCGGAGTTGC 677
Query 1131 AAAGCTTTGTGGTTATCTTCCATTGGCTCTGCATGTTTTAGGGTCATCATTGCGGGGAAA 1190
||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct 678 AAAGCTTTGTGGTAATCTTCCATTGGCTCTACATGTTTTGGGGTCATCATTGCGGGGAAA 737
Query 1191 GAACTATTCTGACTGGATAGAAGAACTACCAAGATTGCAAACTTGTCTTGATGGAAGAAT 1250
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 738 GAACTATTCTGACTGGATAGAAGAACTACCAAGATTACAAACTTGTCTTGATGGAAGAAT 797
Query 1251 TGAGAGTGTATTGAAAGTGGGCTATGAAAGTTTACATGAGAAAGACCAAGCTCTATTTCT 1310
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 798 TGAGAGTGTATTGAAAGTGGGCTATGAAAGTTTACATGAGAAAGACCAAGCACTATTTCT 857
Query 1311 CTACATTGCAGTCTTCTTCAATTATCAACATGCTGATTATGTGACATCCATGCTGGCAAA 1370
||||||||| ||||||||||| ||| |||||||| || ||||||||||||||||||||||
Sbjct 858 CTACATTGCGGTCTTCTTCAACTATGAACATGCTAATCATGTGACATCCATGCTGGCAAA 917
Query 1371 AACTAACTTGAATGTTAGA-C--------------T---TGGGTTAAAAATATTAGCCAA 1412
||||||||||||||||||| | | |||||||||||||||||||||
Sbjct 918 AACTAACTTGAATGTTAGACCTGGGTTAAAAATATTACCTGGGTTAAAAATATTAGCCAA 977
Query 1413 TAGACATCTTATACATATAGGTCATGGCGCTAAAGGTATAGTGGTAATGCACCGTTTGCT 1472
||||||||| ||||| |||| ||||||||||||||||| |||||||||||||||||||||
Sbjct 978 TAGACATCTCATACACATAGATCATGGCGCTAAAGGTAAAGTGGTAATGCACCGTTTGCT 1037
Query 1473 AAAAGTAATGGCTAGACAAGTCATTTCCAAACAAGAGCCTTGGAAACGCCAGATTCTTGT 1532
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1038 ACAAGTAATGGCTAGACAAGTCATTTCCAAACAAGAGCCTTGGAAACGCCAGATTCTTGT 1097
Query 1533 AGATACCCAAGAGATTTCTTATGTTTTGGAAAATGCAGAAGGTAATGGATCAATCGCAGG 1592
||||| |||||||||||| ||||||||||||||||||||||||||||||||||| | ||
Sbjct 1098 AGATAACCAAGAGATTTCCTATGTTTTGGAAAATGCAGAAGGTAATGGATCAATTGTGGG 1157
Query 1593 TATATCATTTGACGTAGGAGAGATCAACAAATTAACAATAAGCGCTAAGGCGTTTGAAAG 1652
|||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct 1158 TATATCCTTTGACGTAGGAGAGATCAACAAATTAACATTAAGCGCTAGGGCGTTTGAAAG 1217
Query 1653 AATGCACAATCTTTTGTTGCTAAAAGTTTACGATCCGTGGTTTACTGGAAAAGGACAAGT 1712
||||||||||||||| || ||||||||||| |||| |||| ||||||||||| ||||| |
Sbjct 1218 AATGCACAATCTTTTCTTACTAAAAGTTTATGATCGGTGGCTTACTGGAAAAAGACAACT 1277
Query 1713 GCACATTCCAGAGGAGATGGATTTTCTTCCTCGCCTAAGCTTACTTCGTTGGGATGCATA 1772
||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct 1278 GCACATTCCAGAGGAGATGGATTTTCTTCCTCGCCTAAGGTTACTACGTTGGGATGCATA 1337
Query 1773 -CACGAGAAAGACCCTTCCTCGTAGATTCTGCCCAGAAAATCTCGTCGAACTCA-ACATG 1830
|| |||||||| |||||||||||||| |||||||||||||| |||||||| | |||||
Sbjct 1338 CCA-GAGAAAGAGTCTTCCTCGTAGATTTTGCCCAGAAAATCTAGTCGAACT-ACACATG 1395
Query 1831 CCGGATAGCCAGCTCGAGAAGCTATGGGAAGGAACTCAGCTGCTTGC-AAATCTCA-AAA 1888
||||||||||||||||||||||||||||| |||||||||| |||| | |||||||| ||
Sbjct 1396 CCGGATAGCCAGCTCGAGAAGCTATGGGACGGAACTCAGCCGCTT-CTAAATCTCACGAA 1454
Query 1889 CGATGAAGCTCTC-TA-GGTCATCTCGTTTGAAGGAACTCCCAAATCTTTCAAATGCTAA 1946
|||||| || || | |||||||| |||||||| |||| ||| ||||||||||||||
Sbjct 1455 -GATGAA-CT-TCAGAGGGTCATCTTGTTTGAAGAAACTTCCAGATCTTTCAAATGCTTC 1511
Query 1947 AAATCTGGAGCG-TCTGGATTTGCATGAATGCGTTGCTTTGTTAGAGCTTCCATCCTCAA 2005
|||||| ||| | | ||||| || |||||||| |||||||| ||||||||||||||||||
Sbjct 1512 AAATCTTGAGAGAT-TGGATCTGTATGAATGCATTGCTTTGGTAGAGCTTCCATCCTCAA 1570
Query 2006 TTTCTAATCTTCATAAACTATACTTCTTAGAGACGAATCATTGCAGACGTCTACAAGTCA 2065
|||||||||||| ||||||| ||| |||||||||||||| ||||||| ||||||||||||
Sbjct 1571 TTTCTAATCTTCGTAAACTAAACTACTTAGAGACGAATCTTTGCAGAAGTCTACAAGTCA 1630
Query 2066 TTCCAACTCTCACCAACTTGGTATCTCTCGAAGATATCAAGATGATGGGATGCTTACGAC 2125
|||||||||||| ||||||| || ||| |||| ||||||||||||||||||| ||||
Sbjct 1631 TTCCAACTCTCATTAACTTGGCATTTCTTAAAGAGATCAAGATGATGGGATGCTCACGAT 1690
Query 2126 TGAAAAGTTTTCCAGATATTCCTGCCAACATCATTAGGCTCTCTGTAATGGAGACTACGA 2185
||| ||||||||||||||||||| |||||||||||| ||||||||||||||||| | |
Sbjct 1691 TGAGAAGTTTTCCAGATATTCCTACCAACATCATTAACCTCTCTGTAATGGAGACAAAGG 1750
Query 2186 TTGCAGAATTTCCCGCGTCACTTAGGCATTTCTCGCATATTGAGTCTTTCGATATAAGTG 2245
|| ||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||
Sbjct 1751 TTACAGAATTTCCCGCATCACTTAGGCATTTCTCGCTTCTTGAGTCTTTCGATATAAGTG 1810
Query 2246 GCAGTGTAAATCTCAAGACCTTTTCAACACTTCTCCCCAC-G-AG-TGTAACAGAGCTAC 2302
| |||||||||||||||||||||||||||| ||||||||| | | |||||||||||| |
Sbjct 1811 GGAGTGTAAATCTCAAGACCTTTTCAACACATCTCCCCACTGTTGTTGTAACAGAGCTTC 1870
Query 2303 ACATAGACAACAGTGGTATTGAGAGTATTACAGATTGCATCAAAGGTCTTCATAATCTAC 2362
|| ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1871 ACCTAGACAATAGTGGTATTGAGAGTATTACAGATTGCATCAGAGGTCTTCATAATCTAC 1930
Query 2363 GTGTCCTTGCTCTATCAAACTGTAAAAAACTCACGTCATTGCCGAAGCTTCCTAGTTCAC 2422
||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||
Sbjct 1931 GTGTCCTTGCTCTATCAAACTGTAAAAAACTCAAGTCATTGCCGAAGCTCCCGAGTTCAC 1990
Query 2423 TCAAATGGCTACGGGC-AAGCCATTGTGAATCACTGGAGAGAGTAAGTGAACCTTTAAAC 2481
|||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct 1991 TCAAATGGCTACGGGCTAA-CCATTGTGAATCACTGGAGAGAGTAAGTGAACCTTTAAAC 2049
Query 2482 ACTCCAAATGCAGACCTTGATTTCAGCAACTGTTTCAAATTGGATCGACAAGCGCGACAA 2541
|| ||||||||||||||||||||||||||||| |||||||||| |||||| || |||| |
Sbjct 2050 ACACCAAATGCAGACCTTGATTTCAGCAACTGCTTCAAATTGGGTCGACAGGCACGACGA 2109
Query 2542 GCGATTTTTCAACAACGGTTTGTTGATGGGCGAGCTCTCTTACCAGGAAGAAAAGTACCT 2601
||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2110 GCGATTTTTCAACAATGGTTTGTTGATGGGCGGGCTCTCTTACCAGGAAGAAAAGTACCT 2169
Query 2602 GCACTGTTCGATCATCGAGCCAGAGGAAATTCATTAACAATTCCTAATTCTGCTTCCTAT 2661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2170 GCACTGTTCGATCATCGAGCCAGAGGAAATTCATTAACAATTCCTAATTCTGCTTCCTAT 2229
Query 2662 AAGGTTTGCGTTGTGATTTCTACAGAGTTTGATCATAAAGACAGAGATTCTACCATAGTT 2721
||||||||||||||||||||||||||||| |||||| ||| || ||||||||| ||||||
Sbjct 2230 AAGGTTTGCGTTGTGATTTCTACAGAGTTCGATCATCAAGCCAAAGATTCTACTATAGTT 2289
Query 2722 TCAAGACTACTGTGTCGTTGCATAGTCATCAGCAACTCAGTAAACTCCACTGACAAGGAG 2781
||||||||| |||||||||||| ||||||| ||| || |||||||| ||||||| ||
Sbjct 2290 TCAAGACTATTGTGTCGTTGCAGAGTCATCGGCAGCTTAGTAAACTTCACTGACGTTAAG 2349
Query 2782 TTTGTACTAACGGATGTCTATAAATATCGAATGGAACATCTATTTATATTTCATATGGTG 2841
||||| ||| | ||| ||| |||||| ||||||||||||| |||||||||||||| |
Sbjct 2350 TTTGTCCTATCCGATATCTGCAAATATAGAATGGAACATCTGTTTATATTTCATATAACG 2409
Query 2842 AACCCGGTGTCC-TT-TTTCTACCCCTCTAGCAGAGAGATAGTGCTCGAATTCAGCAGCA 2899
|| ||| || || || ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2410 AATCCGATG-CCATTCTTT-TACCCCTCTAGCAGAGAGATAGTGCTCGAATTCAGCAGCA 2467
Query 2900 TACACAAACATTTCGACATTGTTGAATGTGGTGTCCAGATCTTGACGGATGAAACAGA-G 2958
|| || || ||| |||||| ||||||||||||||||||||||||||||||||||||| |
Sbjct 2468 TATACCAAGATTGGGACATTATTGAATGTGGTGTCCAGATCTTGACGGATGAAACAGATG 2527
Query 2959 CGAAACAACAATGTGGGTTCTGCAGATGAAGATGATCTCTGGTATATACATGAATTCAGC 3018
|||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct 2528 -GAAACAACAATGGGGGATCTGAAGATGAAGATGATCTCTGGTATATACATGAATTCAGC 2586
Query 3019 GAATCGTTACG-CAAAGAAGAAAAAGATAAAGATAGCGTCGCTAAATCTGAATCCTGCGG 3077
||||| ||| | |||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct 2587 GAATCATTA-GACAAAGAAGAAAAAGATAATGATAGCGTCGCTAAGTCTGAATCCTGCGG 2645
Query 3078 AGCGTCAGAAAAAGAAGATGA-G-G--AA--------G---C---A-A--C--CAAA-GA 3113
|| |||||| ||||| ||||| | | || | | | | | |||| ||
Sbjct 2646 AGTGTCAGACAAAGATGATGAAGAGGGAAACAAAACCGAATCTGGAGAAGCGTCAAAAGA 2705
Query 3114 CAAAGATGAGGATATCGCCGAAC-ACAGTGATTCCGAATCCATATCCGAGAACCGTCCGA 3172
|||||| |||||||||||||| | ||||||| ||||||||||||||| |||| | |||||
Sbjct 2706 CAAAGACGAGGATATCGCCGA-CGACAGTGACTCCGAATCCATATCCAAGAAGCATCCGA 2764
Query 3173 GGAAGAGGACGATGATAAGTGCTACTACTAATCTGAAGAAATGGtttctctgtctttttc 3232
|||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||
Sbjct 2765 GGAAGAGGACGATGATAATTGCTACTACTAATCTGAAGAAATGGATTCTCTGTCTTTTTC 2824
Query 3233 t-tttcttctt-tttctcttttgcttttgttaaattctccatctactttgatcttttctA 3290
| ||| ||||| ||| || ||||||||||||||| |||| ||||||||||||||||||||
Sbjct 2825 TATTT-TTCTTGTTT-TCGTTTGCTTTTGTTAAAGTCTCTATCTACTTTGATCTTTTCTA 2882
Query 3291 A 3291
|
Sbjct 2883 A 2883
> Ahg914947 jgi|Araly1|914947|Al_scaffold_0001_5201
Length=3180
Score = 2032 bits (1100), Expect = 0.0
Identities = 2411/3021 (80%), Gaps = 182/3021 (6%)
Strand=Plus/Plus
Query 14 cttcttcttcttc-ACGTCGCACCT-GGAGATACAATGTCTTCACGAGTTTCCATGGACC 71
||||| ||||||| | |||||||| |||| ||||||||||||||||| |||||||||||
Sbjct 8 CTTCTCCTTCTTCGTC-TCGCACCTGGGAG-TACAATGTCTTCACGAGCTTCCATGGACC 65
Query 72 AGACGTCCGCAAAACATTTCTCAGTCATTTACGCAAACAATTTAACTACAATGGAATTAC 131
|||||||||||| ||||||||||||||||||||||| || |||||| | ||||| || ||
Sbjct 66 AGACGTCCGCAAGACATTTCTCAGTCATTTACGCAACCAGTTTAACCAAAATGGTATCAC 125
Query 132 AATGTTCGATGATCAA-AGGATCGAGAGAAGC-CAAATCATCGCC-CCAGCTCTCACGGA 188
|||||||||||| ||| ||||| ||||||| |||| || || | ||||||| |
Sbjct 126 AATGTTCGATGA-CAACGGGATCCCGAGAAGCGAAAAT-AT-ACCATCTGCTCTCATACA 182
Query 189 AGCGATTAGAGAATCAAGGATCGCTATCGTATTGCTCTCGAAGAACTATGCTTCTTCCAG 248
|| ||||||||||||||||||| | ||| || |||||||||||| |||||||| |||||
Sbjct 183 AGGGATTAGAGAATCAAGGATCTCGATCATAGTGCTCTCGAAGATGTATGCTTCGTCCAG 242
Query 249 TTGGTGTTTGGATGAGTTGTTGGAGATTTTAG-ATTGCAAAGAACAAT-TAGGGCAGATT 306
||||||||||||||| | || |||||||| | | ||||||||| || |||| | ||
Sbjct 243 GTGGTGTTTGGATGAGCTATTAGAGATTTT-GAAGTGCAAAGAA-GATATAGGTAAAATA 300
Query 307 GTGATGACTGTCTTCTACGGAGTACATCCTTCTGATGTAAGGAAACAAACTGGAGATTTC 366
|||||||| ||||||||||||||| |||| |||||||| |||| |||||||||||||||
Sbjct 301 GTGATGACCGTCTTCTACGGAGTAGATCCATCTGATGTGCGGAACCAAACTGGAGATTTC 360
Query 367 GGGATTGCTTTCAATGAAACATGTGCTCGTAAAACAGAGGAGCAGAGGCA-AAAATGGAG 425
||||| ||||||||| |||| |||||||| |||||| ||||||| || | |||||||||
Sbjct 361 GGGATCGCTTTCAATAAAACTTGTGCTCGAAAAACAAAGGAGCA-TGGGAGAAAATGGAG 419
Query 426 CCAAGCGTT-GACCTATGTGGGCAACATCGCTGGAGAACATTTCCAAAACTGGGACAATG 484
| |||| || || ||||||||||||||| || |||||||| | ||||||| |||||
Sbjct 420 CGAAGCTTTGGA-CTATGTGGGCAACATAGCCGGAGAACA----C--AACTGGGGCAATG 472
Query 485 AAGC-GAAGATGATAGAGAAGATTGCAAGTGATGTTTCAGATAAACTCAATACCACACCG 543
|||| ||| ||||| | |||||||||||| ||||||||||||| | | || |||||| |
Sbjct 473 AAGCAGAA-ATGATCGCGAAGATTGCAAGAGATGTTTCAGATAGATTGAACGCCACACTG 531
Query 544 TCTAGGGATTTTGATGGCATGATTGGACTTGAAGCTCATTTGAGAAAAATAGAGTCTTTG 603
||||||||||||||||||||| ||||||||||| ||||||||||| |||| |||||||||
Sbjct 532 TCTAGGGATTTTGATGGCATGGTTGGACTTGAAACTCATTTGAGAGAAATGGAGTCTTTG 591
Query 604 CTTGATTTAGATTATGATGGAGCTAAGATTGTTGGAATCTCTGGTCCTGCAGGCATTGGT 663
||| |||| ||||||| ||||| ||| |||||||| | ||||||||||||| ||||||
Sbjct 592 CTTAATTTTGATTATGTTGGAGTTAAAATTGTTGGGTTAGCTGGTCCTGCAGGTATTGGT 651
Query 664 AAGAGTACCATTGCCAGAGCTTTACATAGTGTACTATCTAAAC-GGTTTCAGCATAATTG 722
||||| |||||||||||||||||| ||||| ||| ||| ||| ||||||| | || |||
Sbjct 652 AAGAGCACCATTGCCAGAGCTTTATGTAGTGGACTCTCT-AACAGGTTTCAACGTACTTG 710
Query 723 TTTTATGGACAACCTTCAT-GAAAGCTATAAGATTGGTCTTGTTGAGTATGGTTTGAGGT 781
|||||||||||||||| || |||| || |||||||||||||| ||||||| |||||| ||
Sbjct 711 TTTTATGGACAACCTT-ATGGAAAACTGTAAGATTGGTCTTGGTGAGTATAGTTTGAAGT 769
Query 782 TGCGGTTACAAGAGCAACTTCTTTCAAAGATTTTGAACCTAGATGGCATTAGGATAGCCC 841
||| || |||||||| |||||||| ||| || |||| ||| |||||||||||||| |||
Sbjct 770 TGCACTTGCAAGAGCAGCTTCTTTCTAAGGTTCTGAATCTAAATGGCATTAGGATATCCC 829
Query 842 ATTTAGGTGTGATACGAGAGAGGCTACACGACCAGAAGG-TTCTTATCATTCTTGATGAT 900
||||| | ||||||| |||||||||||||||| || ||| ||||||||||||||||||||
Sbjct 830 ATTTAAGAGTGATACAAGAGAGGCTACACGACAAG-AGGATTCTTATCATTCTTGATGAT 888
Query 901 GTGGAGAGTCTAGATCAACTTGATGCTTTGGCTAATATCGAG-TGGTTTGGTCCTGGAAG 959
|| |||| ||||| |||||| || ||||||||||||||| || |||||||||||||||||
Sbjct 889 GTTGAGAATCTAGTTCAACTAGAGGCTTTGGCTAATATC-AGCTGGTTTGGTCCTGGAAG 947
Query 960 TAGGGTCATAGTGACCACTGAAAACAAAGAGATTTTACAGCAACATGGTATCAGTGATAT 1019
|||||| || |||||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct 948 TAGGGTTATCGTGACCACTGAAAACAAAGAGATTTTGCAGCAACATGGTATCAATGATAT 1007
Query 1020 ATACCACGTGGGTTTTCCATCAAGTAAA--GAAGCTTTAATGATCTTTTGTCTATCCGCT 1077
|||||| |||||||||||||| || ||| |||||| ||| |||||| |||||||| |||
Sbjct 1008 ATACCAAGTGGGTTTTCCATC-AG-AAAGCGAAGCTCTAACGATCTTCTGTCTATCTGCT 1065
Query 1078 TTTAGAC-AACTCTCTCCACCTGATCGGTTTATGAATCTTGC-TGCTGAAGTTGCAAAGC 1135
||||| | ||| |||||||| ||| |||||||||| ||| | || |||||||| |||
Sbjct 1066 TTTAGGCAAAC-GTCTCCACCGGATGGGTTTATGAAGCTTACTTG-TGAAGTTGTTAAGA 1123
Query 1136 TTTGTGGTTATCTTCCATTGGCTCTGCATGTTTTAGGGTCATCATTGCGGGGAAAGAACT 1195
|||||||| |||||||||||| |||||||||||| ||||| ||||||||||||||| | |
Sbjct 1124 TTTGTGGTAATCTTCCATTGGGTCTGCATGTTTTGGGGTCTTCATTGCGGGGAAAG-AGT 1182
Query 1196 -ATTCTGACTGGATAGAAGAACTACCAAGATTGCAAACTTGTCTTGATGGAAGAATTGAG 1254
| |||| ||||| || ||||||||||| ||| ||| |||||||||||| |||||||||
Sbjct 1183 CAAGCTGATTGGATTGATGAACTACCAAGGTTGAAAATTTGTCTTGATGGGAGAATTGAG 1242
Query 1255 AGTGTATTGAAAGTGGGCTATGAAAGTTTACATGAGAAAGACCAAGCTCTATTTCT-CTA 1313
|| ||| | |||||||| ||||| |||||||||||||||||||||| | ||||||| ||
Sbjct 1243 AGCGTACTAAAAGTGGGTTATGAGAGTTTACATGAGAAAGACCAAGTTATATTTCTCCT- 1301
Query 1314 CATTGCAGTCTTCTTCAATTAT-CAACATGCTGATTATGTGACATCCATGCTGGCAAAAA 1372
||||||| ||||||| |||||| | ||||| |||| ||||||||||| ||||||||||||
Sbjct 1302 CATTGCAATCTTCTTGAATTATGC-ACATGTTGATCATGTGACATCCGTGCTGGCAAAAA 1360
Query 1373 CTAACTTGAATGTTAGACTTGGGTT-AAAAATATTAGCCAATAGACATCTTATACATATA 1431
|||||||| | ||||| |||||||| ||||| |||| || | | |||| |||| | |
Sbjct 1361 CTAACTTGGACGTTAGTCTTGGGTTGAAAAA-CCTAGCGAAAAAATATCTCATAC--A-A 1416
Query 1432 GGTCATGGCGCTAAAGGTATAGTGGTAATGCACCGTTTGCTAAAAGTAATGGCTAGACAA 1491
|| | | | | ||||||| |||||||||| |||||| |||||||||||| ||||
Sbjct 1417 CGTGA--AAG-T--A-GTATAGTCGTAATGCACCATTTGCTTCAAGTAATGGCTACACAA 1470
Query 1492 GTCATTTCCAAACAAGAGCCTTGGAAACGCCAGATTCTT-GTAGATACCCAA-GAGATTT 1549
||||||||||||||||| | || |||||||||||| || || ||| |||| || ||||
Sbjct 1471 GTCATTTCCAAACAAGAACGTTCCAAACGCCAGATT-TTAGTCGAT-GCCAATGAAATTT 1528
Query 1550 CTTATGTTTTGGAAAAT-GCAGAAGGTAATGGATCAATCGCAGGTATATCATTTGACGTA 1608
|| |||| | | |||| |||||||||||||||||||| |||| ||||||||||||||
Sbjct 1529 GTTTTGTTCTAG-AAATGGCAGAAGGTAATGGATCAATTATAGGTGTATCATTTGACGTA 1587
Query 1609 GGAGAGATCAACAAATTAACAATAAGCGCTAAGGCGTTTG-AAAGAATGCACAATCTTTT 1667
| |||||||| |||||| ||||||||| | ||| |||| ||| |||| |||||||
Sbjct 1588 GCTGAGATCAATGAATTAAGAATAAGCGCGACGGCTTTTGCAAA-AATGTGCAATCTTGC 1646
Query 1668 GTTGCTAAAAGTTTACGATCCGTGGTTTACTGGAAAAGGACAAGTGCACATTCCAGAGGA 1727
|| |||||||| ||| || | ||||| |||| |||| ||||||||||| | ||
Sbjct 1647 ATTCCTAAAAGTATACAATGGGAAACATACTGAAAAAACACAACTGCACATTCCAAATGA 1706
Query 1728 GATGGATTTTCTTCCTCGCCT-AAGCTTACTTCGTTGGGATGCATACACGAGAAAGACCC 1786
|||||| |||| | |||||| ||| ||||| | |||||| |||||| | | ||||| |
Sbjct 1707 GATGGAATTTCCACGTCGCCTAAAG-TTACTACATTGGGAAGCATACCCAAAAAAGAGTC 1765
Query 1787 TTCCTCGTAGATTCTGCCCAGAAAATCTCGTCGAACTCAACATGCCGGATAGCCAGCTCG 1846
| ||| | |||| || | ||||||||||||| || |||||||| | |||| ||||||
Sbjct 1766 TACCTATTGGATTTTGTCTAGAAAATCTCGTCAAATTCAACATGGCATTTAGCAAGCTCG 1825
Query 1847 AGAAGCTATGGGAAGGAACTCAGCTGCTTGCAAATCTCAA-AACGATGAAGCTCTCTAG- 1904
||||||| |||||||||||||||| ||||||||||||||| | |||||| ||| || |
Sbjct 1826 AGAAGCTTTGGGAAGGAACTCAGCCGCTTGCAAATCTCAAGGA-GATGAATCTCGCT-GT 1883
Query 1905 GTCATCTCGTTTGAAGGAACTCCCAAATCTTTCAAATGCTAAAAATCTGGAGCGTCTGGA 1964
|||| ||| |||||| ||||| ||| |||||||||| |||| ||||||||| || || |
Sbjct 1884 GTCAACTCATTTGAAAGAACTTCCAGATCTTTCAAAAGCTACAAATCTGGAAAGTTTGAA 1943
Query 1965 T-TTGCATGAATGCGTTGCTTTGTTAGAGCTTCCATCCTCAATTTCT-AATCTTCATAAA 2022
| || ||| ||| ||| ||| ||||| |||||||||||| || | ||||||||||||
Sbjct 1944 TCTT-AATGGTTGCACTGCGTTGGTAGAGATTCCATCCTCAA-TTGTGAATCTTCATAAA 2001
Query 2023 CTATACT-TCTTAGAGACGAATCA-TTGCAG-ACGTCTACAAGTCATTCCAACTCTCACC 2079
||| | | |||| || || | | |||| | | ||||| |||||||||||||||||| |
Sbjct 2002 CTA-AGTGAATTAGGGATGAGT-ACTTGC-GAAAGTCTAGAAGTCATTCCAACTCTCATC 2058
Query 2080 AACTTGGTATCTCTCG-AAGATATCAAGATGATGGGATGCTTACGACTGAAAAGTTTTCC 2138
||||||| |||||| | ||| ||| |||| | | || ||| ||| ||||| |||||
Sbjct 2059 AACTTGGCATCTCTTGAAAG-GATCTGGATGTTTCAAAGCCTACAACTTAAAAGATTTCC 2117
Query 2139 AGATAT-TCCTGCCAACATCATTAGGCTCTCTGTA-ATGGA-GACTAC---GATTGCAGA 2192
|||| | |||| ||||| ||| ||| || | | || | || ||| | | | |||
Sbjct 2118 AGAT-TCTCCTACCAACGTCA--AGGAAATC-G-AGATATACGA-TACAGGGGTAGAAGA 2171
Query 2193 ATTTCCCGCGTCACTTAGGCATT--TCTCG-CATATTGAGTCTTTCGATATAAGTGGC-A 2248
|| || || ||||||||||||| |||| | || | | || || |||||| || | |
Sbjct 2172 GTTGCCTGCATCACTTAGGCATTGCACTCGCCTTACT-ACTC-TT-GATATATGTTCCAA 2228
Query 2249 GTGTAAATCTCAAGACCTTTTCAACACTTCTCCCCACGAGTGTAACA-GAGCTACA-CAT 2306
| |||| |||||||||| ||||||| |||||| ||| || || || | | || | | |
Sbjct 2229 CAG-AAATTTCAAGACCTTCTCAACACATCTCCCTACGTGTATATCATG-GATA-AGCCT 2285
Query 2307 AGA-CAACAGTGGTATTGAGAGTATTACAGATTGCATCAAAGGTCTTCATAATCTACG-T 2364
|| || |||||||||||||| |||||||||||||||||||||||||||||||||| |
Sbjct 2286 -GAGTAATAGTGGTATTGAGAGGATTACAGATTGCATCAAAGGTCTTCATAATCTACAAT 2344
Query 2365 GTCCTTGCTCTATCAAACTGTAAAAAACTCACGTCATTGCCGAAGCTTCCT-AGTTCACT 2423
||||| | || || ||| |||||||||| |||||||||| |||| || | ||| ||
Sbjct 2345 -TCCTTATTTTAACAGGCTGCAAAAAACTCAAGTCATTGCCGGAGCTCCCCGA-TTCGCT 2402
Query 2424 CAAATGGCTACGGGCA-A-GCCATTGTGAATCACTGGAGAGAGTAAGTGAACCTTTAAAC 2481
| ||| ||| ||||| | | |||| || ||| | ||||||||||||| || |||||
Sbjct 2403 CGAATTACTAAGGGCAGAAG--ATTGCGAGTCATTAGAGAGAGTAAGTGGCCCCTTAAAA 2460
Query 2482 ACTCCAAATGCAGAC-CTT-GATTTCAGC-AACTGTTTCAAATTGGATCGACAAGCGCGA 2538
||||||| |||| || || |||| || | || || ||||||||| | ||||||| |
Sbjct 2461 ACTCCAACTGCA-ACGCTCAGATT-CA-CTAATTGCATCAAATTGGGTGGACAAGCAAGG 2517
Query 2539 CAAGCGATTTTTCAACA--A-CGGTTTGTT-GATGGGCGAGCTCTCTTACCAGGAAGA-A 2593
| ||||||| | ||| | | | |||||| | || | ||||||||||| ||| || |
Sbjct 2518 CGAGCGATTAT-CAA-AGGATCA-TTTGTTCGC-GGATGGGCTCTCTTACCCGGAGGAGA 2573
Query 2594 AAGTACCTGCACTGTTCGATCATCGAGCCAGAGGAAATTCATTAACAATTCCTAATTCTG 2653
|| |||| ||| ||||||||| |||| ||||||||||| |||||||||||| |||||
Sbjct 2574 AA-TACCAGCAAAGTTCGATCACCGAGTTAGAGGAAATTCCTTAACAATTCCTCATTCTA 2632
Query 2654 CTTCCTA----T--AAGGTTTGCGTTGTGATTTCTACAGAGTTTGATCA-TAAAG-ACAG 2705
||||| | | ||||| ||||| ||||| || || | ||||| || | | |
Sbjct 2633 CTTCCAACAGATTTAAGGTGTGCGTCGTGATATC-ACCCAAC--GATCAATAC-GTA-A- 2686
Query 2706 AGATTCTACCATAGTTTCAAGACT-ACTGTGTCGTTGCATAGTCATCAGCAACTCAGTAA 2764
| ||| || |||| | || | | | |||||||||| ||||||| ||||||||||||
Sbjct 2687 A-ATT-TATGG-AGTT--A-GAATTATTATGTCGTTGCAAAGTCATCGGCAACTCAGTAA 2740
Query 2765 ACTCCACTGACAAGGAGTTTGTAC-TAA-CGGATGTCTATAAATATC-GAATGGAACATC 2821
||||| |||||| | |||| || || | || |||| | | || | | | |||||
Sbjct 2741 ACTCCTCTGACATGAAGTTCA-ACCTATTCAGA-GTCTTTGAGTA-CAGGACAAAACATT 2797
Query 2822 TATTTATATTTCATATGGTGAACCCGGT-GTCCTTT-TTCTACCCCTCT-A-GC-AG-AG 2875
|||| |||||||| | | | | | | | ||| || ||||||| | | || ||
Sbjct 2798 TATTGATATTTCAC-TC-T-A----GTTTGACATTTATTG-ACCCCTCCGAAGTGAGTAG 2849
Query 2876 A--GATAGTGCTCGAATTCAGCAGCATACA-CAAACATTTCG-ACATTGTTGAATGTGGT 2931
| ||||||||||||||||||||||| || | || ||| | ||||| ||||||| |||
Sbjct 2850 AAAGATAGTGCTCGAATTCAGCAGCAG-CAACCAAGTTTT-GTACATTCTTGAATGCGGT 2907
Query 2932 GTCCAGATCTTGACGGATGAA 2952
||||||||||||||||| |||
Sbjct 2908 GTCCAGATCTTGACGGAAGAA 2928
> Ahg914939 jgi|Araly1|914939|Al_scaffold_0001_5193
Length=2436
Score = 538 bits (291), Expect = 1e-151
Identities = 399/450 (89%), Gaps = 12/450 (3%)
Strand=Plus/Plus
Query 742 GAAAGCTATAAGATTGGTCTTGTTGAGTATGGTTTGAGGTTGCGGTTACAAGAGCAACTT 801
|||| ||||||||||||| ||| |||||||||||||| | |||| |||||||||||||||
Sbjct 163 GAAAACTATAAGATTGGTTTTGGTGAGTATGGTTTGAAGCTGCGCTTACAAGAGCAACTT 222
Query 802 CTTTCAAAGATTTTGAACCTAGATGGCATTAGGATAGCCCATTTAGGTGTGATACGAGAG 861
||||||||||||||||||| | |||| || ||||||| ||||||||||||||||| |||
Sbjct 223 CTTTCAAAGATTTTGAACCAAAATGGTATGAGGATAGACCATTTAGGTGTGATACAAGAA 282
Query 862 AGGCTACACGACCAGAAGGTTCTTATCATTCTTGATGATGTGGAGAGTCTAGATCAACTT 921
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 283 AGGCTACACGACCAGAAGGTTCTTATCATTCTTGATGATGTGGAGAGTCTAGATCAACTT 342
Query 922 GATGCTTTGGCTAATATCGAG-TGGTTTGGTCCTGGAAGTAGGGTCATAGTGACCACTGA 980
||||| ||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||
Sbjct 343 GATGCGTTGGCTAATAT-GAGGTGGTTTGGTGCTGGAAGTAGGGTCATAGTGACCACTGA 401
Query 981 AAACAAAGAGATTTTACAGCAACATGGTATCAGTGATATATACCACGTGGGTTTTCCATC 1040
||||||||| ||||| ||||| |||||| | || | || ||| || ||||| ||||||||
Sbjct 402 AAACAAAGAAATTTTGCAGCAGCATGGTGTTAGCGCTACATATCAAGTGGGGTTTCCATC 461
Query 1041 AAGTAA-AGAAGCTTTAATGATCTTTTGTCTATCCGCTTTTAGACAA-CTCTCTCCACCT 1098
| | || ||||||| ||||||||||||||||||| |||||||||||| || | |||||||
Sbjct 462 A-GAAAGAGAAGCTCTAATGATCTTTTGTCTATCTGCTTTTAGACAAACTTT-TCCACCT 519
Query 1099 GATCGG-TTTAT-GAATCTTGCTGCTGAAGTTGCAAAGCTTTGTGGTTATCTTCCATTGG 1156
|| || ||||| | |||||| | ||||||||||| | |||||||| ||||||||||||
Sbjct 520 CAT-GGATTTATAGC-TCTTGCGGATGAAGTTGCAACGATTTGTGGTAATCTTCCATTGG 577
Query 1157 CTCTGCATGTTTTAGGG-TCATCATTGCGG 1185
||||||||||||| ||| || ||||| |||
Sbjct 578 CTCTGCATGTTTT-GGGATCTTCATTTCGG 606
Score = 444 bits (240), Expect = 2e-123
Identities = 629/810 (78%), Gaps = 53/810 (7%)
Strand=Plus/Plus
Query 1595 TATCATTTGACGTAGGAGAGATCAACAAATTAACAATAAGCGCTAAG-GCGTTTGAAAGA 1653
||||| ||||| ||| ||||| || |||||| |||||||| ||| || ||| |||||
Sbjct 911 TATCAATTGACTTAGAAGAGAACAGTGAATTAATGATAAGCGC-AAGAGCTTTTCAAAGA 969
Query 1654 ATGCACAATCTTTTGTTGCTAAAAGTTTACGATCCGTGGTTTACTGGAAAAGGACAAGTG 1713
|||||||||||||| || || ||||||||| || || || |||||||||| ||||| |
Sbjct 970 ATGCACAATCTTTTTTTCCTGAAAGTTTACAATGCGGGGCGTACTGGAAAAAGACAATTA 1029
Query 1714 CACATTCCAGAGGAGATGGATTTTCTTCCTCGCCTAAGCTTACTTCGTTGGGATGCATAC 1773
|| | || ||||||||||| || | ||||||||||| |||||| |||||||||||||
Sbjct 1030 TACGTACCCGAGGAGATGGAGTTCCCACCTCGCCTAAGGTTACTTTATTGGGATGCATAC 1089
Query 1774 ACGAGAAAGACCCTTCCTCGTAGATTCTGCCCAGAAAATCTCGTCGA-ACTCAACATGCC 1832
||||||||| |||||||||||||| | | |||||||||||||| | ||||||||||
Sbjct 1090 CCGAGAAAGAGTCTTCCTCGTAGATTTTTCGCAGAAAATCTCGTC-ACACTCAACATGAA 1148
Query 1833 GGATAGCCAGCTCGAGAAGCTATGGGAAGGAACTCAG-CTGCTTGCAAATCTCAAA-ACG 1890
|||||| ||||||||||||||||||||||||||||| | ||||||||||||||| | |
Sbjct 1149 AGATAGCGAGCTCGAGAAGCTATGGGAAGGAACTCAGAC-GCTTGCAAATCTCAAGGA-G 1206
Query 1891 ATGAAGCTCTCTAGGTCATCTCGTTTGAAGGAACTCCCAAATCTTTCAAATGCTAAAAAT 1950
||| | || | ||| |||| |||||||||||||||| ||||||||||||||| ||||
Sbjct 1207 ATGGATTTCACGCTGTCGTCTCATTTGAAGGAACTCCCAGATCTTTCAAATGCTATAAAT 1266
Query 1951 CTGGAGCG-TCTGGATTTGCA-TGAATGC-GTTGCTTTG-TTAGAGCTTCCATCCTCAAT 2006
||||| | | || || || | || ||| || |||||| || |||||||||||||||||
Sbjct 1267 TTGGAGAGAT-TGAATCTG-AGTGCTTGCAGT-GCTTTGGTT-GAGCTTCCATCCTCAAT 1322
Query 2007 TTCTAATCTTCATAAACTATACTTC-TTAGAGACG--AATCATTGCAG-ACGTCTACAAG 2062
||| |||||||||||| || || ||| ||| | || | | |||| | |||| |||
Sbjct 1323 TTCGAATCTTCATAAAATAG-CTGAGTTACAGATGGTAAAC-T-GCAGCAA-TCTAGAAG 1378
Query 2063 TCATTCCAACTCTCACCAACTTGGTATCTCTCGA-AGATATCAAGATGATGGGATGCTTA 2121
||||||||| ||||| ||||||| |||||| | || |||||| || | ||||||| |
Sbjct 1379 TCATTCCAAGTCTCATCAACTTGACATCTCTTAATAG-TATCAACCTGCTTGGATGCTCA 1437
Query 2122 CGACTGAAAA-GTTTTCCAGATATT-CCTGCCAACATCATT-AGGCTCTCTGTAATGGAG 2178
||||| || | ||||||||||| || ||| ||||||| | | |||| ||||| |||
Sbjct 1438 CGACT-AAGACGTTTTCCAGAT-TTACCTATCAACATC-TGGACACTCTATGTAACAGAG 1494
Query 2179 ACTACGATTGCAGA--ATTTCCC-GCGTCACTTAGGCATTTCTCGCATATTGAGTC-T-T 2233
| | | | | ||| | || || || |||||||||| || ||| | | || | || | |
Sbjct 1495 AA-A-G-TGGTAGAGGAGTTGCCTGCATCACTTAGGCGTTGCTCTCGTCTTAA-TCATGT 1550
Query 2234 TCGATATA-AGTGGCAGTGTAAATCTCAAGACCTT-TTCAACACTTCTCCCCACGAGTGT 2291
| ||||| | |||| || | ||| ||||||||| || |||||||||||| ||||||||
Sbjct 1551 TA-ATATACAA-GGCAATGGACATCCCAAGACCTTCTT-AACACTTCTCCCGACGAGTGT 1607
Query 2292 AACAGAGCTACACATAGACAACAGTGGTATTGA-GAGTATTACAGATTGCATCAAAGGTC 2350
|||| | ||| | || || || || || | | | | || |||||| |||||||||
Sbjct 1608 AACAAACCTAGAGTTACACGGGAGACGTTTT-ATG-GCAA-AC-GATTGCCTCAAAGGTC 1663
Query 2351 TTCATAATCTA-CGTGTCCTTGCTCTATCA 2379
|||||||||| | | ||||| ||||||||
Sbjct 1664 TTCATAATCTGGCAT-TCCTTACTCTATCA 1692
Score = 318 bits (172), Expect = 1e-85
Identities = 258/298 (87%), Gaps = 12/298 (4%)
Strand=Plus/Plus
Query 1235 GTCTTGATGGAAGAA-TTGAGAGTGTATTGAAAGTGGGCTATGAA-AGTTTACATGAGAA 1292
|||||||||||| || ||||||||||||||||||||| |||| || ||||||||||||||
Sbjct 614 GTCTTGATGGAA-AACTTGAGAGTGTATTGAAAGTGGACTAT-AAGAGTTTACATGAGAA 671
Query 1293 AGACCAAGCTCTATTTCTCTACATTGCAGTCTTCTTCAATTATCAACATGCTGATTATGT 1352
||||||||||||||||||| || ||||| ||||||||||| || |||||| |||| ||||
Sbjct 672 AGACCAAGCTCTATTTCTCCACGTTGCAATCTTCTTCAATCATGAACATGTTGATCATGT 731
Query 1353 GACATCCATGCTGGCAAAAA-CTAACTTGAATGTTAGACTTGGGTTAAAAATATTAGCCA 1411
| |||||||||| ||||||| | |||||||| ||||||| |||||| ||| | |||| |
Sbjct 732 GGCATCCATGCTTGCAAAAAGC-AACTTGAACGTTAGACATGGGTTGAAAGTCCTAGCTA 790
Query 1412 ATAGACATCTTATACATATAGGTCATGGCGCTAAAGGTATAGTGGTAATGCACCGTTTGC 1471
||||| ||| ||||| |||| |||| |||| || ||||||||||||||||||||
Sbjct 791 ATAGATGTCTCATACAAATAGACCATG-----AAAG-TAAAGTGGTAATGCACCGTTTGC 844
Query 1472 TAAAAGTAATGGCTAGACAAGTCATTTCCAAACAAGAGCCTTGGAAACGCCAGATTCT 1529
|| |||||||||| |||||||||||||||| ||||| |||||||||||||||||||||
Sbjct 845 TACAAGTAATGGCCAGACAAGTCATTTCCAGACAAGCGCCTTGGAAACGCCAGATTCT 902
> Ahg914952 jgi|Araly1|914952|Al_scaffold_0001_5206
Length=558
Score = 374 bits (202), Expect = 3e-102
Identities = 351/420 (84%), Gaps = 22/420 (5%)
Strand=Plus/Plus
Query 862 AGGCTACACGACCAGAAGGTTCTTATCATTCTTGATGATGTGGAGAGTCTAGATCAACTT 921
|||||| ||||||||| ||||||||| ||||||||||||| |||||||||| || |||
Sbjct 40 AGGCTAGACGACCAGAGGGTTCTTATTATTCTTGATGATGAGGAGAGTCTATTTCCACTA 99
Query 922 GATGCTTTGGCT-AATATCGA-GTGGTTTGGTCCTGGAAGTAGGGTCATAGTGACCACTG 979
|| ||||||| | |||| | |||||||||||||||||||||||||||||| || | ||
Sbjct 100 GAGGCTTTGG-TCGATAT-TACGTGGTTTGGTCCTGGAAGTAGGGTCATAGTTACAATTG 157
Query 980 AAAA-CAAAGAGATTTTACAGCAACATGGTATCAGTGATATATACCACGTGGGTTTTCCA 1038
|||| |||| ||||||| ||||||||||||||| |||||||||||| ||||| ||||||
Sbjct 158 AAAAACAAA-AGATTTTGGAGCAACATGGTATCAATGATATATACCAAGTGGGGTTTCCA 216
Query 1039 TCAAGTAA-AGAAGCTTTAATGATCTTTTGTCTATCCGCTTTTAGACAA-CTCTCTCCAC 1096
||| | || ||||||| ||| ||||||||||||||| |||||||| ||| | || |||||
Sbjct 217 TCA-GAAAGAGAAGCTCTAAAGATCTTTTGTCTATCTGCTTTTAGGCAAAC-CTTTCCAC 274
Query 1097 CTGATCG-GTTTAT-GAATCTTGCTGCTGAAGTTGCAAAGCT--TTGTGGTTATCTTCCA 1152
|| || | |||||| | |||||| | ||||||||||| | | |||||| |||||||
Sbjct 275 CTAAT-GTGTTTATAGC-TCTTGCGGATGAAGTTGCAA-G-TAATTGTGGCAATCTTCCG 330
Query 1153 TTGGCTCTGCATGTTTTAGGGTCATCATTGCGGGGAAAGAACTATTCTGACTGGATAGA- 1211
|||| ||| |||||||||||| | |||||||| ||||||| | | |||| ||||||||
Sbjct 331 TTGGGTCTACATGTTTTAGGGACGTCATTGCGAGGAAAGAGCCAGGCTGATTGGATAGAT 390
Query 1212 AGAACTACCAAGATT-GCAAACTTGTCTTGATGGAAGAATTGAGAGTGTATTGAAAGTGG 1270
| |||||||||| || | ||||| ||||||||| ||||| |||||||||| |||||||||
Sbjct 391 A-AACTACCAAGGTTAGAAAACT-GTCTTGATGCAAGAACTGAGAGTGTAGTGAAAGTGG 448
> Ahg337990 jgi|Araly1|337990|fgenesh1_pg.C_scaffold_2000089
Length=822
Score = 78.7 bits (42), Expect = 3e-13
Identities = 68/80 (85%), Gaps = 4/80 (5%)
Strand=Plus/Plus
Query 2871 CAGAGAGATAGTGCTCGAATTCAGCAGC-ATAC-ACAAACATTTCGACATTGTTGAATGT 2928
||| |||| |||| | |||||||||||| | || || || | || |||||| ||||||||
Sbjct 456 CAGGGAGAGAGTGTTTGAATTCAGCAGCGA-ACTAC-AAGACTTAGACATTATTGAATGT 513
Query 2929 GGTGTCCAGATCTTGACGGA 2948
||||||||||||||||||||
Sbjct 514 GGTGTCCAGATCTTGACGGA 533
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 124219918272
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5