BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G56550.1 Length=1625 Score E Sequences producing significant alignments: (Bits) Value Ahg474813 jgi|Araly1|474813|fgenesh2_kg.1__4767__AT1G56550.1 2194 0.0 Ahg490401 jgi|Araly1|490401|fgenesh2_kg.6__3535__AT4G01750.1 848 0.0 Ahg352664 jgi|Araly1|352664|fgenesh1_pg.C_scaffold_6003257 632 2e-180 Ahg924351 jgi|Araly1|924351|scaffold_105632.1 473 1e-132 > Ahg474813 jgi|Araly1|474813|fgenesh2_kg.1__4767__AT1G56550.1 Length=1568 Score = 2194 bits (1188), Expect = 0.0 Identities = 1449/1572 (92%), Gaps = 30/1572 (2%) Strand=Plus/Plus Query 65 ACACAACATAAAACATGATAACTAATTCTGACCAAACACATATATAATAATGTAGGTTAC 124 |||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct 1 ACACGACATAAAACATGATAAATAATTATGACCAAACACATATATAATAATGTAGGTTAC 60 Query 125 CTCTTCACGTTGTTATA-GTTTAAACAAAACAATAACGTAGATTGAGTATCTCTACACGT 183 ||||||||||||||||| ||| || |||| |||||||||| ||| |||||||||||||| Sbjct 61 CTCTTCACGTTGTTATATTTTTTAA-AAAATAATAACGTAGGTTGTGTATCTCTACACGT 119 Query 184 TGTCATTCCTGAAGAGTGTCGTTGACtttttagttttttgttcttttcctcatattttcc 243 ||||||||| |||| ||||||||||||||||| ||||||||| ||||||||||||||||| Sbjct 120 TGTCATTCCAGAAG-GTGTCGTTGACTTTTTACTTTTTTGTT-TTTTCCTCATATTTTCC 177 Query 244 aatttttGAATCCGATCAAACAAC--TTGTGAAAACTTTTCTTTCCAAATTTGTTTCCAT 301 |||||| |||||||||| ||||| |||||||||||||||||||||| ||||||||||| Sbjct 178 AATTTTCGAATCCGATC--ACAACTTTTGTGAAAACTTTTCTTTCCAATTTTGTTTCCAT 235 Query 302 GGCGCAGCAGAGCCAACGTCCAATCTCAAACCG-TCACATCTCTCTCCTCAACCGTAACG 360 ||||||||||| ||||||||||||||||||||| || |||||||||||||||||| |||| Sbjct 236 GGCGCAGCAGAACCAACGTCCAATCTCAAACCGTTC-CATCTCTCTCCTCAACCGCAACG 294 Query 361 GTCTCATCCTCCTTCTCCTTCTAGCTCTCTTTGTTATCCTCGGTGTATTCTTACCTTTGA 420 ||||| ||||||||||||||||||||||||| |||||||| ||||| ||| ||||||| | Sbjct 295 GTCTCCTCCTCCTTCTCCTTCTAGCTCTCTTCGTTATCCTAGGTGTGTTCCTACCTTTAA 354 Query 421 CAAAATCTTCCTTGTTCATGTTTCCAAACACAACAtcttcttctctttctccttcttctt 480 || ||||||||| ||| ||| |||| ||||||||||||||||||||||||||||||||| Sbjct 355 CAGGATCTTCCTTATTCCTGTCTCCAGACACAACATCTTCTTCTCTTTCTCCTTCTTCTT 414 Query 481 cttTATCGGTCTCCGACTGGCGCGACTATTCCCTTGCTCAAGCCGTTAAGTTTGTTGCTA 540 |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct 415 CTTTATCGGTCTCCGACTGGAGCGACTATTCCCTTGCTCAAGCCGTTAAGTTTGTGGCTA 474 Query 541 AGAACGAGACTGTGATCGTCTGTGCTGTTAGCTACCCTTTCTTGCCTTTTCTTAACAACT 600 ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| Sbjct 475 AGAACGAGACTGTGATCGTCTGTGCCGTTAGCTACCCTTTCTTGCCTTTTCTCAACAACT 534 Query 601 GGTTGATTAGCATTTCTAGACAGAAACATCAAGAAAAAGTTCTTGTGATCGCTGAAGACT 660 |||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||| | Sbjct 535 GGTTAATTAGCATTTCTAGACAGAACCATCAAGAAAAGGTTCTTGTGATCGCTGAAGATT 594 Query 661 ATGCTACTTTGTACAAAGTCAACGAAAAGTGGCCTGGTCATGCTGTTCTCATTCCTCCGG 720 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 595 ACGCTACTTTGTACAAAGTCAACGAAAAGTGGCCTGGTCATGCTGTTCTCATTCCTCCAG 654 Query 721 CGTTGGATCCTCAATCCGCACACAAATTTGGTTCCCAGGGTTTCTTCAATCTGACATCTC 780 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 655 CGTTGGATCCTCAAGCCGCACACAAATTTGGTTCCCAGGGTTTCTTCAATCTGACATCTC 714 Query 781 GGAGGCCACAACATCTCTTAAACATTTTGGAGCTAGGTTACAATGTTATGTACAATGATG 840 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 715 GGAGGCCACAACATCTCTTGAACATTTTGGAGCTAGGTTACAATGTTATGTACAATGATG 774 Query 841 TTGATATGGTCTGGCTACAAGATCCATTTGACTATTTACAAGGAAGCTACGATGCATACT 900 ||||||||||||||||||||||||| ||| | |||||||| |||||| |||| ||||||| Sbjct 775 TTGATATGGTCTGGCTACAAGATCCGTTTCAATATTTACAGGGAAGCCACGACGCATACT 834 Query 901 TCATGGATGACATGATTGCGATTAAGCCTTTGAATCACTCCCATGATTTACCACCTCTAA 960 ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| | Sbjct 835 TCATGGATGACATGATTGCGATTAAGCCTTTGAATCACTCCCATGGTCTACCACCTCGGA 894 Query 961 GTCGAAGCGGAGTTACTTATGTATGTAGCTGCATGATTTTCTTGCGTTCCACTGATGGCG 1020 ||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||| Sbjct 895 GTCGAAGCGGAGTGACTTATGTATGTAGCTGCATGATTTTCTTGCGTTCAACGGATGGCG 954 Query 1021 GAAAGCTTCTAATGAAGACATGGGTCGAGGAAATTCAAGCTCAACCTTGGAATAACACTC 1080 ||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||| | Sbjct 955 CAAAACTTCTAATGAAGACATGGGTTGAGGAAATTCAAGTTCAACCTTGGAATAACACCC 1014 Query 1081 AAGCAAAGAAACCACATGATCAGCCTGCTTTTAATCGGGCACTTCACAAAACAGCTAATC 1140 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1015 AAGCAAAGAAACCACATGATCAGCCTGCTTTTAATCGGGCACTTCACAAAACAGCTAATC 1074 Query 1141 AAGTAAAAGTCTACTTGCTTCCGCAATCAGCTTTCCCATCAGGAGGATTGTACTTCAGGA 1200 | ||| | ||||||||||||||||||||||| ||||| ||||||||||||||||||| || Sbjct 1075 AGGTAGATGTCTACTTGCTTCCGCAATCAGCATTCCCGTCAGGAGGATTGTACTTCAAGA 1134 Query 1201 ATGAGACATGGGTTAACGAGACAAGGGGGAAACATGTCATAGTCCACAATAACTACATTA 1260 |||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 1135 ATGAGACATGGGTTAATGAGACAAAGGGGAAACATGTCATAGTCCATAATAACTACATTA 1194 Query 1261 TCGGTTACGACAAG-AAGATGAAACGTTTTCAAGACTTTAGTCTATGGCTAGTCGATGAT 1319 |||||||||| ||| ||||||||||| ||||||||||||| |||||||||||| ||||| Sbjct 1195 TCGGTTACGA-AAGGAAGATGAAACGCTTTCAAGACTTTAATCTATGGCTAGTAGATGAC 1253 Query 1320 CATGCTCTTGAGTCCCCACTCGGAAAACTAGAGATATATCAAGAGCAGAATACTACTACT 1379 |||||||| ||||| ||||| |||| | || ||||||||||||||||||||||||||||| Sbjct 1254 CATGCTCTCGAGTCTCCACTGGGAATATTAAAGATATATCAAGAGCAGAATACTACTACT 1313 Query 1380 GAAGGgaaaaatctgacgaaaatagtgagaaaacagaggaaaaacaggggtaaaaaaCAC 1439 ||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||| Sbjct 1314 GAAGGGAAAAATCAGACGAAAACAGTGAGAAAACAGAGGAAAAACAGGGGTAAGAAACAT 1373 Query 1440 AAGTTACCCTAGAGAGGACTTCTCCTTACGTACGACAAGTGTAGGATCTCGAAATTGTTG 1499 |||||||||||||||||||||| |||| |||| |||||| ||| ||||||||||||||| Sbjct 1374 TAGTTACCCTAGAGAGGACTTCTTCTTATGTACAACAAGTATAGTATCTCGAAATTGTTG 1433 Query 1500 CGCGGAGATTTATTCAAACTCGATTACTTAGATATATGTTCAAAGTCTCC-C-ATT---- 1553 | | ||||||||||||||||||||||||||||| ||||||||||||| | | ||| Sbjct 1434 CCCAGAGATTTATTCAAACTCGATTACTTAGATTTATGTTCAAAGTCAGCACTATTTCTC 1493 Query 1554 ATAATA-T--GATATTTATACATAAATAC-T-CATCA-------GCACTATTTCATTAAT 1601 |||||| | |||||||||||||| |||| | ||||| ||||| |||||||| | Sbjct 1494 ATAATAATATGATATTTATACATAGATACATTCATCAATCTTCAGCACTGTTTCATTATT 1553 Query 1602 AACTTTTATGTA 1613 |||||||||||| Sbjct 1554 AACTTTTATGTA 1565 > Ahg490401 jgi|Araly1|490401|fgenesh2_kg.6__3535__AT4G01750.1 Length=1394 Score = 848 bits (459), Expect = 0.0 Identities = 854/1040 (82%), Gaps = 45/1040 (4%) Strand=Plus/Plus Query 322 CAATCTCAAACCGTCACATCTCTCTCCTCAACCGTAACGGTCTCATCCTCCTTCTCCTTC 381 ||||||||||||||| ||||| |||||| | ||| ||||| || ||||||||||||||| Sbjct 128 CAATCTCAAACCGTCCCATCTTTCTCCTTAGCCGCAACGG--TC-TCCTCCTTCTCCTTC 184 Query 382 TAGCTCTCTTTGTTATCCTCGGTGTATTCTTACCTTTGACAAAATCTTCCT-TGTT-CAT 439 | |||||||| || |||| |||||||||||||| | | || ||| |||| |||| | | Sbjct 185 TCGCTCTCTTCCTTCTCCTTGGTGTATTCTTACCCTGGCCAGGATC-TCCTCTGTTGC-T 242 Query 440 GTTTCCAAACACAA--CAtcttcttc-tct--ttctccttcttct-tcttTATC-GGTC- 491 || ||||||| || | |||||| | ||| | || |||||| | |||| | | | | Sbjct 243 ATTACCAAACA-AAGTC-TCTTCTCCTTCTAATGCTACTTCTT-TGTCTTCA-CAAGCCA 298 Query 492 --TCCGACTGGCGCGACTATTCCCTTGCTCAAGCCGTTAAGTTTGTTGCTAAGAACGAG- 548 || || |||||||||||| |||| ||||| |||| |||||| || || ||||||| | Sbjct 299 AATCTGAATGGCGCGACTATACCCTCGCTCAGGCCGCTAAGTTCGTGGCCAAGAACG-GC 357 Query 549 ACTGTGATCGTCTGTGCTGTTAGCTAC-CCTTTCTTGCCTTTTCTTAACAACTGGTTGAT 607 |||||||||||||| || || |||| | || ||||||||||||||||||||||||||||| Sbjct 358 ACTGTGATCGTCTGCGCCGTGAGCT-CACCATTCTTGCCTTTTCTTAACAACTGGTTGAT 416 Query 608 TAGCATTTCTAGACAGAAACATCAAGAAAAAGTTCTTGTGATCGCTGAAGACTATGCTAC 667 ||| ||||||||||||| |||||||||||||| |||||||||||||| || || ||| Sbjct 417 TAGTGTTTCTAGACAGAAGCATCAAGAAAAAGTCCTTGTGATCGCTGAGGATTACATTAC 476 Query 668 TTTGTACAAAGTCAACGAAAAGTGGCCTGGTCATGCTGTTCTCATTCCTCCGGCGTTGGA 727 | |||| ||||||||||| ||||||||||| ||||| ||||| |||||||| ||| | || Sbjct 477 TCTGTATAAAGTCAACGAGAAGTGGCCTGGCCATGCCGTTCTTATTCCTCCTGCGCTCGA 536 Query 728 TCCTC-AATCCGCACACAAATTT-GGTTCCCAGGGTTTCTTCAATCTGACATCTCGGAGG 785 | || || ||||| ||| ||| ||||||||||||||||||||| | ||| |||| ||| Sbjct 537 TTCTAGAA-CCGCATACAG-TTTCGGTTCCCAGGGTTTCTTCAATTTCACAGCTCGAAGG 594 Query 786 CCACAACATCTCTTA-AACATTTTGGAGCTAGGTTACAATGTTATGTACAATGATGTTGA 844 || ||||||||||| || |||||||||||||||||||||||||||||||| |||||||| Sbjct 595 CCGCAACATCTCTTGCAA-ATTTTGGAGCTAGGTTACAATGTTATGTACAACGATGTTGA 653 Query 845 TATGGTCTGGCTACAAGATCCATTTGACTATTTACAAGGAAGCTACGATGCATACTTCAT 904 |||||| ||| | |||||||| ||| | ||||| | |||||| |||| || ||||||| Sbjct 654 TATGGTTTGGTTGCAAGATCCGTTTCAGTATTTGGAGGGAAGCCACGACGCGTACTTCAC 713 Query 905 GGATGACATGATTGCGA-TTAAGCCTTTGAATCACTCCCATGATTTACCACCTCTA-AGT 962 |||||| ||| | | | ||||||||||||||||||| |||||||||||| || | | Sbjct 714 GGATGATATGCCT-CAAATTAAGCCTTTGAATCACTCTCATGATTTACCAGATCCGGA-T 771 Query 963 CGAAGCGGAGTTACTTATGTATGTAGCTGCATGATTTTCTTGCGTTCCACTGATGGCGGA 1022 | || ||||| |||||| |||||||||||||||||| ||||||| |||||||||| | | Sbjct 772 CAAAACGGAGAGACTTATATATGTAGCTGCATGATTTACTTGCGTCCCACTGATGGTGCA 831 Query 1023 AAGCTTCTAATGAAGACATGG-GTCGAGGAAATTCAAGCTCAACCTTGGAATAACACTCA 1081 |||||||||||||||| |||| || |||||| ||||| | ||| ||||| | | | || Sbjct 832 AAGCTTCTAATGAAGAAATGGAGT-GAGGAACTTCAATCCCAAGCTTGGTCTGAGTC-CA 889 Query 1082 AGCAAAG-AAACCACATGATCAGCCTGCTTTTAA-TCGGGCACTTCACAAAACAGCTAAT 1139 | ||| || |||| |||||||||||||| | || ||||| ||||||||||| || Sbjct 890 TCCGTTTTAAAGCAAATGACCAGCCTGCTTTTAACTTGG-CACTTAACAAAACAGCTCAT 948 Query 1140 CAAGTAAAAGTCTACTTGCT-TCCGCAA-TCAGCTTTCCCATCAGGAGGATTGTACTTCA 1197 ||||| | | |||||||| || |||| | |||||| ||| |||||||||||||||||| Sbjct 949 CAAGTGGATCTGTACTTGCTCTC-GCAAGT-AGCTTTTCCAACAGGAGGATTGTACTTCA 1006 Query 1198 GGAATGAGACATGGGTTAACGAGACAAGGGGGAAACATGTCATAGTCCACAATAACTACA 1257 | || ||| |||||||||| ||||||| |||||||||||||||| ||||||||||||||| Sbjct 1007 GTAACGAGGCATGGGTTAAAGAGACAAAGGGGAAACATGTCATAATCCACAATAACTACA 1066 Query 1258 TTATCGGTTACGACAAGAAGATGAAACGTTTTCAAGACTTTAGTCTATGGCTAGTCGATG 1317 |||||||||||||||| || |||| |||||| ||||| | | |||||||||||||||||| Sbjct 1067 TTATCGGTTACGACAACAAAATGAGACGTTTCCAAGAATATGGTCTATGGCTAGTCGATG 1126 Query 1318 ATCATGCTCTTGAGTCCCCA 1337 ||||| |||| ||||| ||| Sbjct 1127 ATCATACTCTCGAGTCTCCA 1146 > Ahg352664 jgi|Araly1|352664|fgenesh1_pg.C_scaffold_6003257 Length=915 Score = 632 bits (342), Expect = 2e-180 Identities = 681/840 (81%), Gaps = 41/840 (5%) Strand=Plus/Plus Query 322 CAATCTCAAACCGTCACATCTCTCTCC-TCAACCGTAACGGTCTCATCCTCCTTCTCCTT 380 |||||||| ||||| ||||||| ||| | | ||| ||||| || |||||||||||||| Sbjct 68 CAATCTCAGTCCGTCCCATCTCTGTCCGT-AGCCGCAACGG--TC-TCCTCCTTCTCCTT 123 Query 381 CTAGCTCTCTT-TGTTATCCTCGGTGTATTCTTACCTTTGACAAAATCTTCCTTGTT-CA 438 || |||||||| | || ||||||||||||||||||| | | || |||| |||| || || Sbjct 124 CTCGCTCTCTTCT-TTCTCCTCGGTGTATTCTTACCCTGGCCAGGATCTCCCTTATTCCA 182 Query 439 TGTTTCCAAACACAACAtcttcttc-tctttctccttcttct-t--cttTATCGGTC--T 492 ||||||||||| || | |||||| || |||| |||| ||| | | | |||| | | Sbjct 183 -GTTTCCAAACA-GAC-T-TTCTTCTTC-TTCTTCTTC-TCTGTCACCGTCTCGG-CAGT 235 Query 493 CCGACTGGCGCGACTATTCCCTTGCTCAAGCCGTTAAGTTTGTTGCTAAGAACGAG-ACT 551 || | |||| ||||||| |||||||||| |||| |||||| || || ||||||| | ||| Sbjct 236 CCAAATGGCACGACTATACCCTTGCTCAGGCCGCTAAGTTCGTGGCCAAGAACG-GCACT 294 Query 552 GTGATCGTCTGTGCTGTTAGCTAC-CCTTTCTTGCCTTTTCTTAACAACTGGTTGATTAG 610 ||||||||||| || || |||| | || |||||||||||||| ||||||||||||||||| Sbjct 295 GTGATCGTCTGCGCCGTGAGCT-CACCATTCTTGCCTTTTCTCAACAACTGGTTGATTAG 353 Query 611 CATTTCTAGACAGAAACATCAAGAAAAAGTTCTTGTGATCGCTGAAGACTATGCTACTTT 670 ||||||||||||| |||||||||||||| || ||||||||||| || || |||||| | Sbjct 354 TGTTTCTAGACAGAAGCATCAAGAAAAAGTCCTCGTGATCGCTGAGGATTACGCTACTCT 413 Query 671 GTACAAAGTCAACGAAAAGTGGCCTGGTCATGCTGTTCTCATTCCTCCGGCGTTGGA-TC 729 ||| ||||| ||||| ||||||||||| ||||| ||||| |||||||||||| | || || Sbjct 414 GTATAAAGTTAACGAGAAGTGGCCTGGCCATGCCGTTCTTATTCCTCCGGCGCTCGATTC 473 Query 730 CTCAATCCGCACACAAATTT-GGTTCCCAGGGTTTCTTCAATCTGACATCTCGGAGGCCA 788 | || ||||| || | ||| ||||||||||||||||||||| | ||| |||| ||||| Sbjct 474 C-AAAACCGCATAC-AGTTTCGGTTCCCAGGGTTTCTTCAATTTCACAGCTCGAAGGCCG 531 Query 789 CAACATCTCTT-AAACATTTTGGAGCTAGGTTACAATGTTATGTACAATGATGTTGATAT 847 ||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct 532 CAACATCTCTTGCAA-GTTTTGGAGCTAGGTTACAATGTTATGTACAACGATGTTGATAT 590 Query 848 GGTCTGGCTACAAGATCCATTTGACTATTTACAAGGAAGCTACGATGCATACTTCATGGA 907 ||| ||| | |||||||| ||| | ||||| | |||||| | || | ||||||| ||| Sbjct 591 GGTTTGGTTGCAAGATCCGTTTCAGTATTTGGAGGGAAGCCATGACGTGTACTTCACGGA 650 Query 908 TGACATGATTGCGATTAA-GCCTTTGAATCACTCCCATGATTTACCACCTCTAAGTCGAA 966 |||| || | | | ||| ||||||||||||||| ||||||||||||| || |||||| Sbjct 651 TGACTTGCCT-CAAATAAAGCCTTTGAATCACTCTCATGATTTACCACATCCGGGTCGAA 709 Query 967 GCGGAGTTACTTATGTATGTAGCTGCATGATTTTCTTGCGTTCCACTGATGGCGGAAAGC 1026 ||||| || ||| |||||||||||||||||| |||||| ||||| |||| | ||||| Sbjct 710 ACGGAGAGACGTATATATGTAGCTGCATGATTTACTTGCGACCCACTAATGGTGCAAAGC 769 Query 1027 TTCTAATGAAGACATGG-GTCGAGGAAATTCAAGCTCAACCTTGGAATAACACTCAAGCA 1085 |||||||||||| |||| || |||||| ||||| | ||| ||||| | | | || | Sbjct 770 TTCTAATGAAGAAATGGAGT-GAGGAACTTCAATCCCAAGCTTGGTCTGAGTC-CATCCG 827 Query 1086 AAG-AAA-CCACATGATCAGCCTGCTTTTAA-TCGGGCACTTCACAAAACAGCTAATCAA 1142 ||| ||| ||||||||||||||||||| | || ||||| ||||||||||| ||||| Sbjct 828 TTTTAAAGCCA-ATGATCAGCCTGCTTTTAACTTGG-CACTTAACAAAACAGCTCATCAA 885 > Ahg924351 jgi|Araly1|924351|scaffold_105632.1 Length=610 Score = 473 bits (256), Expect = 1e-132 Identities = 385/442 (87%), Gaps = 30/442 (7%) Strand=Plus/Plus Query 599 CTGGTTGATTAGCATTTCTAGACAGAAACATCAAGAAAAAGTTCTTGTGATCGCTGAAGA 658 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct 32 CTGGTTGATTAGCATTTCTAGACAGAACCATGAAGAAAAAGTTCTTGTGATCGCTGAAGA 91 Query 659 CTATGCTACTTTGTACAAAGTCAACGAAAAGTGGCCTGGTCATGCTGTTCTCATTCCTCC 718 || ||||||||||||||||||||||||| ||||||||||||||| || ||||||||| | Sbjct 92 TTACGCTACTTTGTACAAAGTCAACGAAAGGTGGCCTGGTCATGCCGTCCTCATTCCTTC 151 Query 719 GGCGTTGGATCCTCAATCCGCACACAAATTTGGTTCCCAGGGTTTCTTCAATCTGACATC 778 ||||||||||||||| |||||||||||||||||||||||| | || | ||||| Sbjct 152 AGCGTTGGATCCTCAAGCCGCACACAAATTTGGTTCCCAGG----C--CA--CA-ACATC 202 Query 779 TCGGAGGCCACAACATCTCTTAAACATTTTGGAGCTAGGTTACAATGTTATGTACAATGA 838 || | | || ||||| |||||||||||||||||||||||||||||| Sbjct 203 TC-------------T-TG--AA-CATTT-GGAGCTAGGTTACAATGTTATGTACAATGA 244 Query 839 TGTTGATATGGTCTGGCTACAAGATCCATTTGACTATTTACAAGGAAGCTACGATGCATA 898 ||||||||||||||||||||||||||| ||| | |||||||| |||||| |||| ||||| Sbjct 245 TGTTGATATGGTCTGGCTACAAGATCCGTTTCAATATTTACAGGGAAGCCACGACGCATA 304 Query 899 CTTCATGGATGACATGATTGCGATTAAGCCTTTGAATCACTCCCATGATTTACCACCTCT 958 ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| | Sbjct 305 CTTCATGGATGACATGATTGCGATTAAGCCTTTGAATCACTCCCATGGTCTACCACCACG 364 Query 959 AAGTCGAAGCGGAGTTACTTATGTATGTAGCTGCATGATTTTCTTGCGTTCCACTGATGG 1018 |||||| ||||||| ||||||||||||||||||||||||||||||| |||| ||||| Sbjct 365 GAGTCGAGGCGGAGTGACTTATGTATGTAGCTGCATGATTTTCTTGC---CCACGGATGG 421 Query 1019 CGGAAAGCTTCTAATGAAGACA 1040 || ||||||||||||||||||| Sbjct 422 CGCAAAGCTTCTAATGAAGACA 443 Score = 111 bits (60), Expect = 1e-23 Identities = 70/74 (95%), Gaps = 3/74 (4%) Strand=Plus/Plus Query 1075 ACACTCAAGCAAAGAAACCACATG---ATCAGCCTGCTTTTAATCGGGCACTTCACAAAA 1131 |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 441 ACACCCAAGCAAAGAAACCACATGATCATCAGCCTGCTTTTAATCGGGCACTTCACAAAA 500 Query 1132 CAGCTAATCAAGTA 1145 |||||||||||||| Sbjct 501 CAGCTAATCAAGTA 514 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 60906301755 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5