BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G56650.1
Length=914
Score E
Sequences producing significant alignments: (Bits) Value
Ahg474823 jgi|Araly1|474823|fgenesh2_kg.1__4777__AT1G56650.1 1343 0.0
Ahg925797 jgi|Araly1|925797|scaffold_201358.1 778 0.0
Ahg925796 jgi|Araly1|925796|scaffold_201357.1 641 0.0
Ahg475739 jgi|Araly1|475739|fgenesh2_kg.2__869__AT1G66370.1 597 4e-170
Ahg925795 jgi|Araly1|925795|scaffold_201356.1 340 8e-93
> Ahg474823 jgi|Araly1|474823|fgenesh2_kg.1__4777__AT1G56650.1
Length=903
Score = 1343 bits (727), Expect = 0.0
Identities = 846/904 (94%), Gaps = 5/904 (1%)
Strand=Plus/Plus
Query 1 ATACCTTTTACAATTTGTTTATATATTTTACG--TATCTATCTTTGTTCCATGGAGGGTT 58
|||||||||| || ||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct 1 ATACCTTTTAAAACTTGTTTAGATATTTTACGTATATCTATCTTTGTTCCATGGAGGGTT 60
Query 59 CGTCCAAAGGGCTGCGAAAAGGTGCTTGGACTACTGAAGAAGATAGTCTCTTGAGACAGT 118
||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct 61 CGTCCAAAGGGCTACGAAAAGGTGCTTGGACTGCTGAAGAAGATAGTCTTTTGAGACAGT 120
Query 119 GCATTAATAAGTATGGAGAAGGCAAATGGCACCAAGTTCCTGTAAGAGCTGGGCTAAACC 178
|||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 GCATTAATAAGTTTGGTGAAGGCAAATGGCACCAAGTTCCTGTAAGAGCTGGGCTAAACC 180
Query 179 GGTGCAGGAAAAGTTGTAGATTAAGATGGTTGAACTATTTGAAGCCAAGTATCAAGAGAG 238
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 181 GGTGCAGGAAAAGTTGTAGACTAAGATGGTTGAACTATTTGAAGCCAAGTATCAAGAGAG 240
Query 239 GAAAACTTAGCTCTGATGAAGTCGATCTTCTTCTTCGCCTTCATAGGCTTCTAGGGAATA 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 241 GAAAACTTAGCTCTGATGAAGTCGATCTTCTTCTTCGCCTTCATAGGCTTCTAGGAAATA 300
Query 299 GGTGGTCTTTAATTGCTGGAAGATTACCTGGTCGGACCGCAAATGACGTCAAGAATTACT 358
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 301 GGTGGTCTTTAATTGCTGGAAGATTACCTGGTCGGACCGCAAATGATGTCAAGAATTACT 360
Query 359 GGAACACTCATCTGAGTAAGAAACATGAACCGTGTTGTAAGATAAAGATGAAAAAGAGAG 418
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| |
Sbjct 361 GGAACACTCATCTGAGTAAGAAACATGAACCATGTTGTAAGATCAAGATGAAAAAGAAAA 420
Query 419 ACATTACGCCCATTCCTACAACACCGGCACTAAAAAACAATGTTTATAAGCCTCGACCTC 478
||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct 421 ACATTACGCCCATTCCTACAACACCAGCACTAAAAATCAATGTTTATAAGCCTCGACCTC 480
Query 479 GATCCTTCACAGTTAACAACGACTGCAACCATCTCAATGCCCCACCAAAAGTTGACGTTA 538
|||||||| ||||||||||||| |||||||||||||||| ||| ||| ||||||||||||
Sbjct 481 GATCCTTCGCAGTTAACAACGATTGCAACCATCTCAATGGCCCGCCAGAAGTTGACGTTA 540
Query 539 ATCCTCCATGCCTTGGACTTAACATCAATAATGTTTGTGACAATAGTATCATATACAACA 598
||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||
Sbjct 541 ATCCTCCATGCCTTGGACTCAACAACAATAATGTTTGTGACAATAGTATCAAATACAACA 600
Query 599 AAGATAAGAAGAAAGACCAACTAGTGAATAATTTGATTGATGGAGATAATATGTGGTTAG 658
||||| |||||||||| || || ||||||||||||||| |||||| |||||||||||| |
Sbjct 601 AAGATGAGAAGAAAGATCAGCTTGTGAATAATTTGATTCATGGAGGTAATATGTGGTTGG 660
Query 659 AGAAATTCCTAGAGGAAAGCCAAGAGGTAGATATTTTGGTTCCTGAAGCGACGACAACAG 718
||| ||||| ||||| |||||||||| |||||| |||||||| ||||||||||||||||
Sbjct 661 AGAGTTTCCTTGAGGAGAGCCAAGAGGAAGATATCTTGGTTCCAGAAGCGACGACAACAG 720
Query 719 AAAAGGGGGACACCTTGGCTTTTGACGTTGATCAACTTTGGAGTCTTTTCGATGGAGAGA 778
|||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 721 AAAAAGGGGACACCTTGGCATTTGACGTTGATCAACTTTGGAGTCTTTTCGATGGAGAGA 780
Query 779 CTGTGAAATTTGATTAGTGTTTCGAACATTTGTTTGCGTTTGTGTATAGGTTTGCTTTCA 838
|||| ||||||||||||||||| |||||| ||||||||||||||| | |||||||||||
Sbjct 781 CTGTAAAATTTGATTAGTGTTTGGAACATATGTTTGCGTTTGTGTGTGGGTTTGCTTTCG 840
Query 839 CCTTTTAATT--TGTGTGTTTTGATAAATAAGCTAATAGTTTTTAGCATTTTAATGAAAT 896
||| |||| |||||||||| ||||||||||||||| ||||||| ||| |||||||||
Sbjct 841 TATTT-AATTAGTGTGTGTTTTAATAAATAAGCTAATAATTTTTAGAATTATAATGAAAT 899
Query 897 ATTT 900
||||
Sbjct 900 ATTT 903
> Ahg925797 jgi|Araly1|925797|scaffold_201358.1
Length=788
Score = 778 bits (421), Expect = 0.0
Identities = 673/793 (85%), Gaps = 23/793 (3%)
Strand=Plus/Plus
Query 33 TATCTATCTTTGTTCCATGGAGGGTTCGTCCAAAGGGCTGCGAAAAGGTGCTTGGACTAC 92
||| |||||||| |||||||| |||||||| |||||| | |||||||||| |||||| |
Sbjct 6 TATTTATCTTTGCTCCATGGAAGGTTCGTCGAAAGGGTTAAGAAAAGGTGCATGGACTGC 65
Query 93 TGAAGAAGATAGTCTCTTGAGACAGTGCATTAATAAGTATGGAGAAGGCAAATGGCACCA 152
||||||||||||||||||||| || || ||| ||||||||||||||||||||||||||||
Sbjct 66 TGAAGAAGATAGTCTCTTGAGGCAATGTATTGATAAGTATGGAGAAGGCAAATGGCACCA 125
Query 153 AGTTCCTGTAAGAGCTGGGCTAAACCGGTGCAGGAAA-AGTTGTAGATTAAGATGGTTGA 211
||||||| | ||||||||||||||||||||||| ||| ||||||||| |||||||||| |
Sbjct 126 AGTTCCTTTGAGAGCTGGGCTAAACCGGTGCAG-AAAGAGTTGTAGACTAAGATGGTTAA 184
Query 212 ACTATTTGAAGCCAAGTATCAAGAGAGGAAAACTTAGCTCTGATGAAGTCGATCTTCTTC 271
||||||| ||||||||||||||||| |||| | |||||||||||||||| ||||||||||
Sbjct 185 ACTATTTAAAGCCAAGTATCAAGAGGGGAAGATTTAGCTCTGATGAAGTTGATCTTCTTC 244
Query 272 TTCGCCTTCATAGGCTTCTAGGGAATAGGTGGTCTTTAATTGCTGGAAGATTACCTGGTC 331
|||||||||||| |||||| || ||||||||||| | |||||||| |||| |||||||
Sbjct 245 TTCGCCTTCATAAGCTTCTCGGAAATAGGTGGTCCCTGATTGCTGGTCGATTGCCTGGTC 304
Query 332 GGACCGCAAATGACGTCAAGAATTACTGGAACACTCATCTGAGTAAGAAACATGAACCGT 391
|||| || ||||| ||||| |||||||||||||| ||||| ||||||||||||||||| |
Sbjct 305 GGACTGCTAATGATGTCAAAAATTACTGGAACACCCATCTAAGTAAGAAACATGAACCAT 364
Query 392 GTTGTAAGA-TAAAGATGAAAAAGAGAGACATTACG-CCCATTCCTACAACACCGG-CAC 448
||||||||| |||| |||||||||| | |||| | ||| | ||||||||||||| | |
Sbjct 365 GTTGTAAGACTAAA-ATGAAAAAGAAAAACATCATTTCCCCT-CCTACAACACCGGTC-C 421
Query 449 TAAAAAA-CAATGTTTATAAGCCTCGACCTCGATCCTTCACAGTTAACAACGACTGCAAC 507
|||||| | |||||| |||||||||||||||||||||| | || ||||| | ||| | |
Sbjct 422 -AAAAAATCGATGTTTTTAAGCCTCGACCTCGATCCTTCTCCGTAAACAATGGCTGTAGC 480
Query 508 CATCTCAATGCCCCACCAAAAGTTGACGTTAAT-CCT-CCATGCCTTGGACTTAACATCA 565
||||||| || | |||| ||||||| ||||| ||| || ||||||||||| |||| ||
Sbjct 481 CATCTCAGTGGTCTACCAGAAGTTGAT-TTAATTCCTTCC-TGCCTTGGACTCAACAACA 538
Query 566 ATAATGTTTGTGACAATAGTATCATATACAACAAAGATAA-GAAGAAAGACCAACTAGTG 624
||||||||||||| |||||||||| || ||||||||| | || |||||| | | |||
Sbjct 539 ATAATGTTTGTGAAAATAGTATCACATGTAACAAAGATGATGA-GAAAGATGATTTTGTG 597
Query 625 AATAATTTGATTGA-TGGAGATAATATGTGGTTAGAGAAATTCCTAGAGGAAAGCCAAGA 683
|||||| | || || |||||||||||||||||| ||||| || |||||||| ||||||||
Sbjct 598 AATAATCTAAT-GAATGGAGATAATATGTGGTTGGAGAATTTACTAGAGGAGAGCCAAGA 656
Query 684 GGTAGATATTTTGGTTCCTGAA-GCGACGACAACAGAAAAGGGGGACACCTTGGCTTTTG 742
| |||| | ||||| ||| || |||||||| ||| |||||| ||| ||||| ||||
Sbjct 657 AGCAGATGCGATAGTTCC-GAAAGCAACGACAACTGAAGAGGGGGCCACTTTGGCGTTTG 715
Query 743 ACGTTGATCAACTTTGGAGTCT-TTTCGATGGAGAGACTGTGAAATTTGATTAGTGTTTC 801
|| |||| |||||||||||||| ||| ||||||||||||||| || ||||||||||||||
Sbjct 716 ACCTTGAGCAACTTTGGAGTCTGTTT-GATGGAGAGACTGTGGAACTTGATTAGTGTTTC 774
Query 802 GAACA-TTTGTTT 813
|| |||||||
Sbjct 775 TCACCGTTTGTTT 787
> Ahg925796 jgi|Araly1|925796|scaffold_201357.1
Length=789
Score = 641 bits (347), Expect = 0.0
Identities = 658/803 (82%), Gaps = 41/803 (5%)
Strand=Plus/Plus
Query 33 TATCTATCTTTGTTCCATGGAGGGTTCGTCCAAAGGGCTG-CGAAAAGGTGCTTGGACTA 91
||||||| ||||||||||||||| | | ||||| ||| || || |||||||| ||||||
Sbjct 7 TATCTATATTTGTTCCATGGAGGCTACTTCCAATGGGTTGACG-AAAGGTGCATGGACTG 65
Query 92 CTGAAGAAGATAGTCTCTTGA-GACAGTGCATTAATAAGTATGGAGAAGGCAAATGGCAC 150
||||||||||||||||||||| || | || ||| ||||||||||||||||||||||||||
Sbjct 66 CTGAAGAAGATAGTCTCTTGAGGA-AATGTATTGATAAGTATGGAGAAGGCAAATGGCAC 124
Query 151 CAAGTTCCTGTAAGAGCTGGGCTAAACCGGTGCAGGAAAAGTTGTAGATTAAGATGGTTG 210
||||||||| |||||||||||||||| || |||||||| ||||||||| ||||||||||
Sbjct 125 CAAGTTCCTTTAAGAGCTGGGCTAAATCGATGCAGGAAGAGTTGTAGACTAAGATGGTTA 184
Query 211 AACTATTTGAAGCCAAGTATCAAGAGAGGAAAACTTAGCTCTGATGAAGTCGATCTTCTT 270
||||||||||||||||||||||| ||||||||| ||||| |||||||||| |||||||||
Sbjct 185 AACTATTTGAAGCCAAGTATCAATAGAGGAAAATTTAGCACTGATGAAGTTGATCTTCTT 244
Query 271 CTTCGCCTTCATAGGCTTCTAGGGAATAGGTGGTCTTTAATTGCTGGAAGATTACCTGGT 330
|||||||| |||| ||||||||| ||||| ||||| || |||||||| |||| |||| |
Sbjct 245 CTTCGCCTCCATAAGCTTCTAGGAAATAGATGGTCCTTGATTGCTGGTCGATTGCCTGAT 304
Query 331 CGGACCGCAAATGACGTCAAGAATTACTGGAACACTCATCTGAGTAAGAAACATGAACCG 390
|| ||||||||||| || ||||||||||||||||| ||| |||||| || |||||||
Sbjct 305 CGTACCGCAAATGATGTTAAGAATTACTGGAACACCCATTTGAGTAGGAGGCATGAACTT 364
Query 391 TGTTGTAAGAT--AAAGATGAAAAAGAGAGACATTACG-CCCATTCCTACAACACCGG-C 446
| ||||| | | ||| ||||||| || | ||||||| ||| | ||||||||||| | |
Sbjct 365 TTTTGTA-GTTCCAAA-ATGAAAACGAAAAACATTACTTCCCCT-CCTACAACACCTGTC 421
Query 447 ACTAAAAAA-C-AATGTTTATAA-GCCTCGACCTCGATCCTTCACAGTTAACAACG-ACT 502
| |||||| | || |||| ||| ||||||||||||||||||| | ||||| |||| | |
Sbjct 422 -C-AAAAAATCGAA-GTTT-TAAAGCCTCGACCTCGATCCTTCTCCGTTAAAAACGCA-T 476
Query 503 GCAACCATCTCAATGCCCCACCAAAAGTTGACGTTAATCCTCCATGC-CTTGGACTTAAC 561
| | ||||||||||| | ||||||||||| |||| |||||||||| || ||||| ||
Sbjct 477 GTAGCCATCTCAATGGCTTTCCAAAAGTTGATGTTATTCCTCCATGCTCT-GGACTCAAT 535
Query 562 ATCAATAATGTTTGTGACAA-TAGTATCATATACAACAAAGATAAGAAGAAAGACCAA-C 619
| |||| |||||||||| || ||||||||||| | ||||| ||||||| | | |
Sbjct 536 AACAATTATGTTTGTGA-AAGTAGTATCATATGTGGCGAAGATGAGAAGAATTATGAGTC 594
Query 620 TAGTGAATAAT--T-TGATTGATGGAGATAATATGTGGTTAGA-GAAATTCCTAGAGGAA 675
| ||| |||| | | || ||| ||| ||||||||||| || || || |||||| |
Sbjct 595 T-GTGTATAAAAATCTAATGGATAAAGACAATATGTGGTT-GAAGAGTTTACTAGAG-A- 650
Query 676 AGCCAAGAGGTAGATATTTTGGTTCCTGAAGCGACGACAACAGAAAAGGGGGACACCTTG 735
||||||||| |||| ||| ||| ||||| |||||||||||||| |||| ||| |||
Sbjct 651 -GCCAAGAGGCAGATGCACTGGGTCCAGAAGCAACGACAACAGAAAACGGGGCCACTTTG 709
Query 736 GCTTTTGACGTTGATCAACTTTGGAGTCTT-TTCGATGGAGAGACTGT-GAAATTTGATT 793
| ||||| ||||| |||||||||| ||| || |||||||||||||| ||| || ||||
Sbjct 710 GAATTTGATGTTGAACAACTTTGGAA-CTTGTTTGATGGAGAGACTGTTGAACTT-GATT 767
Query 794 AGTGTTTC-GAACA-TTTGTTTG 814
|||||||| || | ||||||||
Sbjct 768 AGTGTTTCTGA-CTGTTTGTTTG 789
> Ahg475739 jgi|Araly1|475739|fgenesh2_kg.2__869__AT1G66370.1
Length=750
Score = 597 bits (323), Expect = 4e-170
Identities = 607/740 (82%), Gaps = 35/740 (5%)
Strand=Plus/Plus
Query 63 CAAAGGGCTGCGAAAAGGTGCTTGGACTACTGAAGAAGATAGTCTCTTGAGACAGTGCAT 122
|||||| || |||||||| | |||||| |||||||||||||||||||||| ||||||||
Sbjct 15 CAAAGGTTTGAGAAAAGGTACATGGACTGCTGAAGAAGATAGTCTCTTGAGGCAGTGCAT 74
Query 123 TAATAAGTATGGAGAAGGCAAATGGCACCAAGTTCCTGTAAGAGCTGGGCTAAACCGGTG 182
| |||||||||||||| ||||||||||||| |||||| |||||||||||||||| |||||
Sbjct 75 TGATAAGTATGGAGAAAGCAAATGGCACCAGGTTCCTTTAAGAGCTGGGCTAAATCGGTG 134
Query 183 CAGGAAA-AGTTGTAGATTAAGATGGTTGAACTATTTGAAGCCAAGTATCAAGAGAGGAA 241
|| |||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||||
Sbjct 135 CA-GAAAGAGTTGTAGACTAAGATGGTTGAACTATTTGAAGCCAAGTATTAAGAGAGGAA 193
Query 242 AACTTAGCTCTGATGAAGTCGATCTTCTTCTTCGCCTTCATAGGCTTCTAGGGAATAGGT 301
|| || ||||||||||||| || |||||||||||||| || | ||||||||| ||||| |
Sbjct 194 AATTTTGCTCTGATGAAGTAGACCTTCTTCTTCGCCTGCACAAGCTTCTAGGAAATAGAT 253
Query 302 GGTCTTTAATTGCTGGAAGATTACCTGGTCGGACCGCAAATGACGTCAAGAATTACTGGA 361
|||| || |||||||| |||| ||||||||||| || ||||| |||||||||| ||||
Sbjct 254 GGTCCTTGATTGCTGGTCGATTGCCTGGTCGGACTGCTAATGATATCAAGAATTATTGGA 313
Query 362 ACACTCATCTGAGTAAGAAACATGA--ACCG-TGTTGTAAGATAAAGATGAAAAAGAGAG 418
|||| ||| |||||||||| ||||| | | ||| |||||| ||||||| ||| |||
Sbjct 314 ACACCCATTTGAGTAAGAAGCATGATGAACTATGTCGTAAGACGAAGATGATAAACAGAA 373
Query 419 ACATTACG-CCCATTCCTACAACACCGGCACTAAAAAA-CAATGTTTATAA-GCCTCGAC 475
||||||| ||||| ||||| || |||| | |||||| | |||||| ||| ||||||||
Sbjct 374 ACATTACTTCCCAT-CCTACTACTTCGGCCC-AAAAAATCGATGTTT-TAAAGCCTCGAC 430
Query 476 CTCGATCCTTCACAGTTAACAACGACT-GCAACCATCTCAATGCCCCACCAAAAGTTGAC 534
||||||||||| | | ||| || | | ||||| ||||||||| || ||||||||||||
Sbjct 431 CTCGATCCTTCTCCGATAAAAAT-AGTTGCAACGATCTCAATGTCCTGCCAAAAGTTGAC 489
Query 535 GTTAAT-CCTCCATGCCTTGGACTTAACATCAATAATGTTTGTGACAAT-AGTATCATAT 592
|| | | ||| |||| ||||||| |||| ||||||||||||||| || ||||||| ||
Sbjct 490 GT-AGTTCCTTCATGGTTTGGACTCAACAACAATAATGTTTGTGA-AAGGAGTATCACAT 547
Query 593 ACAACAAAGATAAGAAGAAAGACCAA-CT-AGTGAATAATTTGATTGATGGAGATAATA- 649
||||||||| || ||||||| || || | | |||||| | || |||||||||||||
Sbjct 548 GTAACAAAGATGAGCAGAAAGAT-AAGCTTACT-AATAATCTAATGGATGGAGATAATAC 605
Query 650 TGTGGTTAGAGAAATTCCTAGAGGAAAGCCAAGAGGTAGATATT-TT-GGTTCCTGAAGC 707
| |||| |||| || || ||||| || ||||| | |||| || || ||| || ||||
Sbjct 606 T-TGGTGGGAGAGTTTACTGGAGGAGAGTCAAGAAGCAGAT-TTATTCGGT-CCAGAAG- 661
Query 708 G-ACGACAACAGAAAAGGGGGACACCTTGGCTTTTGACGTTGATC-AA-CTTTGGAGTCT 764
| |||| ||||||||| || || |||| ||| ||||||||| || || |||||| || |
Sbjct 662 GTACGATAACAGAAAAAGGAGAGACCTCGGCGTTTGACGTT--TCGAAACTTTGGGGTTT 719
Query 765 -TTTCGATGGAGAGACTGTG 783
|||| ||| |||||| |||
Sbjct 720 GTTTC-ATGAAGAGACGGTG 738
> Ahg925795 jgi|Araly1|925795|scaffold_201356.1
Length=467
Score = 340 bits (184), Expect = 8e-93
Identities = 289/340 (85%), Gaps = 6/340 (2%)
Strand=Plus/Plus
Query 33 TATCTATCTTTGTTCCATGGAGGGTTCGTCCAAA-GGGCTGCGAAAAGGTGCTTGGACTA 91
||| |||||||| ||||||| |||| | |||| ||| || |||||||| | ||||||
Sbjct 5 TATTTATCTTTGGGACATGGAGAGTTCCT-CAAATGGGTTGAGAAAAGGTACATGGACTG 63
Query 92 CTGAAGAAGATAGTCTCTTGA-GACAGTGCATTAATAAGTATGGAGAAGGCAAATGGCAC 150
|||||||||||| |||||||| || | || ||| ||||||||||||||||||||||||||
Sbjct 64 CTGAAGAAGATATTCTCTTGAGGA-AATGTATTGATAAGTATGGAGAAGGCAAATGGCAC 122
Query 151 CAAGTTCCTGTAAGAGCTGGGCTAAACCGGTGCAGGAAAAGTTGTAGATTAAGATGGTTG 210
|| |||||| ||||||||||| ||||||| ||| |||| |||||||| |||||||||||
Sbjct 123 CAGGTTCCTTTAAGAGCTGGGTTAAACCGATGCGGGAAGGGTTGTAGACTAAGATGGTTG 182
Query 211 AACTATTTGAAGCCAAGTATCAAGAGAGGAAAACTT-AGCTCTGATGAAGTCGATCTTCT 269
||||| ||| ||||||||||||| |||||||| ||| ||||| || ||||| ||||||||
Sbjct 183 AACTACTTGCAGCCAAGTATCAAAAGAGGAAA-CTTTAGCTCAGACGAAGTTGATCTTCT 241
Query 270 TCTTCGCCTTCATAGGCTTCTAGGGAATAGGTGGTCTTTAATTGCTGGAAGATTACCTGG 329
|||||||||| || ||||||||| || |||||||| | ||||| || ||||| |||||
Sbjct 242 CCTTCGCCTTCGTAAGCTTCTAGGAAACAGGTGGTCACTGATTGCCGGTAGATTGCCTGG 301
Query 330 TCGGACCGCAAATGACGTCAAGAATTACTGGAACACTCAT 369
|||||| || ||||| ||||||||||||||||||| |||
Sbjct 302 TCGGACTGCTAATGATATCAAGAATTACTGGAACACCCAT 341
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 33891273213
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5