BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G58060.1
Length=4611
Score E
Sequences producing significant alignments: (Bits) Value
Ahg925182 jgi|Araly1|925182|scaffold_200743.1 7110 0.0
Ahg315392 jgi|Araly1|315392|fgenesh1_pm.C_scaffold_2000425 2134 0.0
> Ahg925182 jgi|Araly1|925182|scaffold_200743.1
Length=4422
Score = 7110 bits (3850), Expect = 0.0
Identities = 4227/4410 (96%), Gaps = 21/4410 (0%)
Strand=Plus/Plus
Query 28 CGGAAGAGAATGGCTCCGAAGAAGAAACCTCAGAAGCAAAGCAACAAAGCTGCTTCGTCT 87
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 17 CGG-AGAGAATGGCTCCGAAGAAGAAACCTCAGAAGCAAAGCAACAAAGCTGCTTCGTCT 75
Query 88 TCTTCATCGTCGAAATCGAATTATCAGAAACCTTCTTCAGGTCCTAAGCTTCAGATATCA 147
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 76 TCTTCATCGTCGAAATCGAATTATCAGAAACCTTCTTCAGGTCCTAAGCTTCAGATTTCG 135
Query 148 GCGGAGAACGAGGATCGTTTGCGGCGGCTCTTACTCAACTCTGGCCGC-TCCGGTCCTTC 206
|| |||||||| |||||||||||||||||||| ||||||||||||||| | |||||||||
Sbjct 136 GCAGAGAACGAAGATCGTTTGCGGCGGCTCTTGCTCAACTCTGGCCGCAT-CGGTCCTTC 194
Query 207 GATTCCAGCTCCAATCAGTAATTCTCTCTCCAAAGCTCAAAAGACAAAGAAACTCAATAA 266
| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 195 GGTTCCGGCTCCAATCAGTAATTCTCTCTCCAAAGCTCAAAAGACAAAGAAACTCAATAA 254
Query 267 TGTCTATGAGAAGCTCTCTTGCGAAGGTTTCGTTGATGATCAGATTGAACTCGCTCTCTC 326
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 255 TGTCTATGAGAAGCTCTCTTGCGAAGGTTTCGTTGATGATCAGATTGAGCTCGCTCTCTC 314
Query 327 CTCTCTTAGAGATGGAGCTACGTTTGAGGCTGCACTTGATTGGCTTTGTTTGAATTTGCC 386
||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct 315 TTCTCTTAGAGATGGAGCTACGTTTGAGGCTGCACTTGATTGGCTTTGCTTGAACTTGCC 374
Query 387 GAGTCATGAGTTGCCTGTGAAGTTTTCTACTGGAGCTTCTCGTTTTCCTTCCACAGGAGG 446
||||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||
Sbjct 375 GAGTCATGAGTTGCCAGTGAAGTTTTCTACTGGAGCTTCTCGCTTTCCTACCACAGGAGG 434
Query 447 TTCTGTGGGTGTGATATCGACCTCACGGGACGATTGGAATGATTCTACTGACTCTTCAGT 506
| |||||||||||||||||| ||||||||| ||||||||||| ||| |||||||||||||
Sbjct 435 TACTGTGGGTGTGATATCGATCTCACGGGATGATTGGAATGAATCTGCTGACTCTTCAGT 494
Query 507 -CAGGGTAGAGGAAGAGGAACCTGCAGTTTTTGTTCGTGTGAAGGG-AAAGCAAGATGAA 564
|| ||||||||| ||||| ||||| ||||| ||||| |||||||| ||| ||||||||
Sbjct 495 CCA-GGTAGAGGAGGAGGAGCCTGCGGTTTTCGTTCGAGTGAAGGGCAAA-CAAGATGAG 552
Query 565 GAAGATACTCTTAGTTCTGACAAGTCATCTCAAGCTGATTGGATTCGGCAGTATATGATG 624
||||||||||||| ||| | ||| || |||||||||||||||||||| ||||||||||||
Sbjct 553 GAAGATACTCTTAATTCCGGCAAATCGTCTCAAGCTGATTGGATTCGTCAGTATATGATG 612
Query 625 AGACAGGAAGAGGAAGAATTGGAATGTTGGGAAGATGAAGTAGATGGTATTGACCCCAGA 684
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||
Sbjct 613 AGACAGGAAGAGGAAGAATTGGAATGTTGGGAAGATGAGGTAGATGGTATTGACCCCGGA 672
Query 685 AATAAGGTCTCTGGTCCAAGGCCATTCGATGTGATTGCCAAAGAATACTATTCGGCAAGA 744
|| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 673 AAGAAGGTATCTGGTCCAAGGCCATTCGATGTGATTGCCAAAGAATATTATTCGGCAAGG 732
Query 745 TCAGATGCTATAAAAGCAAAGGAGAAGCGTGATAAAAGAGGACAGGAGCAAGCAGGCCTA 804
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 733 TCAGATGCTATAAAAGCTAAGGAGAAGCGTGATAAAAGAGGACAGGAGCAAGCAGGCCTA 792
Query 805 GCCATTCGCAAGCTCAAGCAAGAGATATCTGATCTTGGGTTATCAGAAGCAATGTTGGAA 864
|| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 793 GCAATTCGGAAGCTCAAGCAAGAGATATCTGATCTTGGGTTATCAGAAGCAATGTTGGAA 852
Query 865 TCTGAATTTCAGCGTGAACATGCTTTTGAAAGTGCTACAGAACAAGAATCAACCTGTCCC 924
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 853 TCTGAATTTCAGCGTGAACATGCTTTTGAAAGTGCTACAGAACAAGAATCAACGTGTCCC 912
Query 925 ATTTCCGATAACCTTCATGAGTCAGTTGATGCTGACGATGTCTCTGTTCAG-ATGTTAGA 983
|||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct 913 ATTTCCAATAACCTTCATGAGTCAGTTGATGCTGACGATGTCTCTGTTCAGCA-GTTAGA 971
Query 984 TAATTTGACCTTGA-ATACCAATCCTGCTGAGAGCTATGAGTCTGAGGAAATTCAAACTA 1042
||| |||||||| | || |||||||||||| ||||| |||||||||||||||||||||||
Sbjct 972 TAACTTGACCTT-AGATGCCAATCCTGCTGGGAGCTGTGAGTCTGAGGAAATTCAAACTA 1030
Query 1043 AAGCTCTTCCCTCAAGTTCCTCGGGACAAGATTTTGTTGCATCAGATGAAGATTCAGAGG 1102
|||||||||| ||||||||||| ||||||||||| |||||||| ||||||||||||||||
Sbjct 1031 AAGCTCTTCCTTCAAGTTCCTCAGGACAAGATTTAGTTGCATCGGATGAAGATTCAGAGG 1090
Query 1103 ACGTGGAACTTGGCGATACATTCTTTGAAGAAATTCCGCCTTCTGAAATTTCACCCCATG 1162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1091 ACGTGGAACTTGGCGATACATTCTTTGAAGAAATTCCGCCTTCTGAAATTTCACCCCATG 1150
Query 1163 AACTCCTGGAATTGCAGAAGGAGGAAAAGATGAGAGAACTACGTAGTGAGAAAAATCTGG 1222
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct 1151 AACTCCTGGAATTGCAGAAGGAGGAAAAGATGAGAGAACTACGCAGTGAGAAAAATCTCG 1210
Query 1223 GGAAACTAGATGGTATCTGGAAGAAGGGTGAGGCGCAAAAGATCCCAAAAGCATTTCTCC 1282
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct 1211 GGAAACTAGATGGTATCTGGAAGAAGGGTGATGCGCAAAAGATCCCAAAGGCATTTCTCC 1270
Query 1283 ATCAATTGTGTCAAAGATCAGGGTGGGAAGCACCAAAGTTCAATAAAGAAACCGGTGAAG 1342
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1271 ATCAATTGTGTCAAAGATCAGGGTGGGAAGCACCAAAGTTCAATAAAGTAACCGGTGAAG 1330
Query 1343 GAAGAAATTTCTCATATACTGTAAGTATTCTGCGCAAAGCCAGTGGGA-GGGGTAAAAAC 1401
||| |||||||||||| |||||||||| ||||||||||||||| ||| |||||||||||
Sbjct 1331 AAAGGAATTTCTCATATGCTGTAAGTATCCTGCGCAAAGCCAGT-GGACGGGGTAAAAAC 1389
Query 1402 AGACAAGCCGGTGGTCTGGTAACTCTCCAACTTCCTCCTAAAGATGAGAATTTTGAATCC 1461
||||||||||| ||||| |||||||| |||||||||| ||||||||| || |||||||||
Sbjct 1390 AGACAAGCCGGGGGTCTTGTAACTCTTCAACTTCCTCTTAAAGATGATAACTTTGAATCC 1449
Query 1462 ATCGAGGATGCACAAAACAAAGTTGCAGCATTTGCTCTTCATAAACTTTTTTCTGATTTA 1521
|||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||
Sbjct 1450 ATCGAGGATGCACAAAACAAAGTTGCGGCATTTGCTCTTCATAAGCTATTTTCTGATTTA 1509
Query 1522 CCTGTCCACTTTGCAATTACGGAGCCTTATGCTTCTCTAGTTTTGATCTGGAAACAAGAG 1581
|||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 1510 CCTGTCCACTTTGCAATTACGGAGCCTTATGCCTCTCTAGTTTTGAACTGGAAACAAGAG 1569
Query 1582 GAATTGTTGTGTACTACCATACAAAGCACAGAAGAAGACCGAAGAGCTAATTTTGTTGAT 1641
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1570 GAATTGTTGTG---TACCATACAAAGCACAGAAGAAGACCGAAGAGCTAATTTTGTTGAT 1626
Query 1642 AAGTTGCTTGAGGAGGACAGTTTTAGTTTGACCACTTCGTCGAGTAGCTTTGAGAATTCG 1701
||||| ||||||||||||| ||| ||||||||| ||||||| |||||| |||| ||| ||
Sbjct 1627 AAGTTTCTTGAGGAGGACAATTTCAGTTTGACCGCTTCGTCAAGTAGCATTGACAATGCG 1686
Query 1702 CTTCCGTTGGTAGACTCCTATGTCAAAGACAAAGATGACTTGGGTGTTGTCAAATCTAAC 1761
||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct 1687 CTTCCATTGGTAGACTCCTATGTCAAAGAGAAGGATGACTTGGGTGTTGTCAAATCTAAC 1746
Query 1762 AACAGAGCTA-AAAGAGACTCTTATATAGAGGCTGAGTGTTTATCTCTCCAACGAAAACA 1820
||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1747 CACAGAGCTAGAAA-AGACTCTTATATAGAAGCTGAGTGTTTATCTCTCCAACGAAAACA 1805
Query 1821 AGAAAACAAAAAGAGAACGCAAAAGTACAAGGACATGTTGAAAACTAGAACTGCTCTTCC 1880
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1806 AGAAAACAAAAAGAGAACGCAAAAGTACAAGGACATGTTGAAAACTAGAACTGCTCTTCC 1865
Query 1881 TATATCTGAAGTTAAGAATGGCATACTCCAGCATCTGAAAGAAAAAGATGTCTTGGTGGT 1940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1866 TATATCTGAAGTTAAGAATGGCATACTCCAGCATCTGAAAGAAAAAGATGTCTTGGTGGT 1925
Query 1941 ATGCGGAGAAACAGGCTCTGGAAAGACTACACAGGTTCCTCAATTTATATTGGATGATAT 2000
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1926 ATGCGGAGAAACAGGCTCTGGAAAGACTACACAGGTTCCCCAATTTATATTGGATGATAT 1985
Query 2001 GATTGATTCGGGGCATGGTGGATACTGTAATATCATATGCACACAACCTCGTCGGATAGC 2060
||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1986 GATTGATTCAGGGCATGGTGGATACTGTAATATCATATGCACACAACCTCGGCGGATAGC 2045
Query 2061 GGCTATCTCTGTTGCTCAAAGAGTTGCTGATGAGCGTTGTGAATCCTCTCCAGGCTTAGA 2120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2046 GGCTATCTCTGTTGCTCAAAGAGTTGCTGATGAGCGTTGTGAATCCTCTCCAGGCTCAGA 2105
Query 2121 TGACTCATTGGTTGGGTATCAAGTTCGTCTTGAAAGTGCAAGGAGTGACAAGACTAGGCT 2180
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2106 TGACTCCTTGGTTGGGTATCAAGTTCGTCTTGAAAGTGCAAGGAGTGACAAGACTAGGCT 2165
Query 2181 GCTGTTTTGTACTACTGGCATTCTACTGAGGAAACTCGCTGGGGATAGAACCTTGAACGA 2240
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2166 GCTGTTTTGTACTACTGGCATTCTACTGAGGAAACTCGCTGGGGATAAAACCTTGAACGA 2225
Query 2241 TGTTACACATATTATAGTTGATGAAGTGCATGAGCGGTCTCTTTTGGGTGATTTTCTTCT 2300
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2226 TGTTACACATATTATAGTCGATGAAGTGCATGAGCGGTCTCTTTTGGGTGATTTTCTTCT 2285
Query 2301 AATTATTTTGAAGAGCCTGATTGAGAAGCAATCATGCGATAATACATCACGTAAACTGAA 2360
||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct 2286 CATTATTTTGAAGACCCTGATTGAGAAGCAATCATGTGATAATACATCACGTAAACTTAA 2345
Query 2361 AGTTATCCTTATGTCTGCTACTGTTGACGCTGATCTATTCTCAAGATATTTTGGTCATTG 2420
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2346 AGTTATCCTTATGTCTGCTACTGTTGACGCTGATCTATTCTCAAGATATTTTGGCCATTG 2405
Query 2421 TCCTGTGATCACTGCTCAAGGACGAACACATCCAGTCACTACCCACTTCCTGGAGGAGAT 2480
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2406 TCCTGTGATAACTGCTCAAGGACGAACACATCCAGTCACTACCCACTTCCTGGAGGAGAT 2465
Query 2481 TTATGAGAGTATTAACTACCTTCTTGCTCCAGATTCTCCTGCTGCGCTAAGATCTGATAC 2540
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
Sbjct 2466 TTATGAGAGTATTAACTACCTTCTTGCTCCAGATTCTCCTGCTGCGCTAAGGTCTGATTC 2525
Query 2541 ATCTATTAAAGACAAGCTTGGTTCTGTAAATGACCGTAGGGGGAAAAAGAATCTTGTATT 2600
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2526 ATCTATTAAAGAAAAGCTTGGTTCTGTAAATGACCGTAGGGGAAAAAAGAATCTTGTATT 2585
Query 2601 GGCTGGCTGGGGCGACGATTATTTGCTTTCAGAGGACTGTCTTAATCCTTTTTATGTTTC 2660
|||||||||||||||||||||||||||||| |||||||||||||| || |||||||||||
Sbjct 2586 GGCTGGCTGGGGCGACGATTATTTGCTTTCGGAGGACTGTCTTAACCCATTTTATGTTTC 2645
Query 2661 CAGTAATTACAACTCATACAGTGACCAAACACAACAAAATCTGAAAAGGTTAAACGAGGA 2720
|||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct 2646 TAGTAATTACAACTCATACAGTGACCAAACACAGCAAAATCTGAAAAGGTTAAATGAGGA 2705
Query 2721 TAGAATTGACTACGAGCTTCTTGAAGAGTTGATATGCCACATTGATGACACTTGTGAGGA 2780
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2706 TATAATTGACTACGAGCTTCTTGAAGAGTTGATATGCCACATTGATGACACTTGTGAGGA 2765
Query 2781 AGGAGCCATTCTTATATTTTTGCCTGGAGTGGCAGAAATTTACATGTTACTCGATATGTT 2840
||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| | |
Sbjct 2766 AGGGGCCATTCTTATATTTTTGCCTGGAGTGTCAGAAATTTACATGTTACTCGATAGGAT 2825
Query 2841 AGCTGCTTCCTATCGTTTTCGTGGACCTGCTGCAGATTGGCTTCTTCCTCTACATTCTTC 2900
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2826 AGCTGCTTCCTATCGTTTTCGTGGACCTGCTGCAGATTGGCTTCTTCCCCTACATTCTTC 2885
Query 2901 TATTGCATCTTCAGAACAGAGAAAGGTGTTTCTGCGTCCCCCTAAAGGCTTACGGAAGGT 2960
|||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2886 TATTGCATCTACAGAACAGAGAAAGGTGTTTCTGCGTCCCCCTAAAGGCATACGGAAGGT 2945
Query 2961 TATCGCAGCTACAAATATTGCAGAGACCAGTATAACAATTGATGATGTGGTGTATGTGAT 3020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2946 TATCGCAGCTACAAATATTGCAGAGACCAGTATAACAATTGATGATGTGGTGTATGTGAT 3005
Query 3021 TGACAGTGGCAAACACAAGGAAAATCGCTACAATCCACAGAAGAAACTGTCGAGCATGGT 3080
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 3006 TGACAGTGGCAAACACAAGGAAAATCGCTACAATCCACAGAAGAAATTGTCGAGCATGGT 3065
Query 3081 GGAAGATTGGATATCTCAAGCAAATGCAAGACAAAGAACAGGAAGAGCTGGACGCGTCAA 3140
||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct 3066 GGAAGATTGGATATCTCAAGCAAATGCAAGACAAAGAACAGGAAGGGCTGGACGTGTCAA 3125
Query 3141 ACCTGGGATTTGCTTTTCATTGTACACACGCTATAGGTTCGAGAAGCTAATGCGTCCCTA 3200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3126 ACCTGGGATTTGCTTTTCATTGTACACACGCTATAGGTTCGAGAAGCTAATGCGTCCCTA 3185
Query 3201 TCAGGTTCCTGAAATGCTGCGGATGCCATTAGTAGAGTTATGTCTACAAATCAAATTGCT 3260
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3186 TCAGGTTCCTGAGATGCTGCGGATGCCATTAGTAGAGTTATGTCTACAAATCAAATTGCT 3245
Query 3261 TGGCTTGGGTCACATTAAACCTTTTCTGTCCAGGGCTTTGGAACCTCCGAGTGAAGGTGC 3320
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 3246 TGGCTTGGGTCACATTAAACCTTTTCTGTCCAAGGCTTTGGAACCTCCGAGTGAAGGTGC 3305
Query 3321 TATGACCTCTGCGATTTCATTGTTACATGAGGTTGGTGCTGTTGAAGGGGATGAAGAGTT 3380
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 3306 TATGACCTCTGCGATTTCATTGTTACACGAGGTTGGTGCTGTTGAAGGGGATGAAGAGTT 3365
Query 3381 GACACCACTTGGGCATCATTTAGCCAAACTTCCTGTTGATGTGTTAATTGGAAAGATGCT 3440
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 3366 GACACCACTTGGGCATCATTTAGCGAAACTTCCTGTTGATGTGTTAATTGGAAAGATGCT 3425
Query 3441 GTTATACGGTGGAATATTTGGTTGCTTATCACCTATTCTCTCGATCGCAGCTTTCTTGAG 3500
|||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 3426 GTTATATGGTGGAATATTTGGTTGCTTATCACCTATTCTCTCGATCGCTGCTTTCTTGAG 3485
Query 3501 CTACAAATCGCCGTTTATATATCCCAAAGATGAGAAGCAAAATGTCGACCGGGTGAAACT 3560
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 3486 CTACAAATCGCCGTTTATATACCCCAAAGATGAGAAGCAAAATGTCGACCGGGTGAAACT 3545
Query 3561 TGCTCTTTTGTCTGACAATG-GGGTGAGCTCAAGTGATTTAAACAACAATGACAGACAAT 3619
||||||||||||||||||| ||| |||||| ||||||||||||||||||||||||||||
Sbjct 3546 TGCTCTTTTGTCTGACAATCTGGG-GAGCTCGAGTGATTTAAACAACAATGACAGACAAT 3604
Query 3620 CTGATCACCTCCTTATGATGGTTGCATACGATAAATGGGTGAAGATACTGCAAGAGCGAG 3679
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 3605 CTGATCACCTCCTTATGATGGTTGCATACGATAAATGGGTGAAGATACTGCAGGAGCGAG 3664
Query 3680 GAATGAAAGCTGCACAGAGGTTCTGTGAATCAAAGTTCTTGAGCAGCTCAGTGATGCGGA 3739
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3665 GAATGAACGCTGCACAGAGGTTCTGTGAATCAAAGTTCTTGAGCAGCTCAGTGATGCGGA 3724
Query 3740 TGATCAGAGACATGAGAGTACAATTTGGCACATTACTTGCCGACATCGGGCTCATCAATC 3799
|||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct 3725 TGATCAGAGATATGAGGGTACAATTTGGCACATTACTTGCCGATATCGGGCTCATCAATC 3784
Query 3800 TTCCTAAAACAGGAGAGTTTTCAGGAAGGAAAAAGGAAAATCTTGATGTCTGGTTTTCTG 3859
|||||||||||||||||||||| || || |||||||| ||||||||||||||||||||||
Sbjct 3785 TTCCTAAAACAGGAGAGTTTTCGGGGAGAAAAAAGGAGAATCTTGATGTCTGGTTTTCTG 3844
Query 3860 ACCCAACTCAACCTTTCAATATGTATTCACAGCAACCTGAAGTTGTTAAGGCTATACTAT 3919
||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||| | |
Sbjct 3845 ACCGAACTCAACCTTTCAATATGTATTCACAACAACCTGAAGTTGTTAAGGCGATATTGT 3904
Query 3920 GCGCAGGACTATATCCTAATATAGCAGCCAATGATAAAGGAATTACAGAGACAACGTTTA 3979
|||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||
Sbjct 3905 GCGCAGGACTATATCCTAATATTGCAGCCAATGATAAGGGAATTACAGAGACAGCGTTTA 3964
Query 3980 ACAGTTTGACAAAGCAAGGAAACCAAACAAAGAGCTACTCGGCATGGTACGATGGCAGAA 4039
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 3965 ACAGTTTGACAAAGCAAGGAAACCAAACAAAGAGCTATTCGGCATGGTACGATGGCAGAA 4024
Query 4040 GGGAAGTTCATATCCATCCATCTTCCATAAACAGCAACTTCAAAGCATTTCAAAACCCTT 4099
| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||
Sbjct 4025 GAGAAGTTCATATCCATCCATCTTCTATAAACAGCAACTTCAAAGCATTTCAATACCCTT 4084
Query 4100 TCCTTGTATTCCTTGAGAAGGTGGAAACGAACAAAGTATATTTGCGAGATACAACCATTG 4159
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 4085 TCCTTGTATTCCTTGAGAAGGTCGAAACGAACAAAGTATATTTGCGAGATACAACCATTG 4144
Query 4160 TTTCTCCTTTCTCTATTCTACTTTTTGGCGGCTCAATCAATGTTCATCATCAGAGTGGAT 4219
| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 4145 TATCTCCTTTCTCCATTCTACTTTTTGGCGGTTCAATCAATGTTCATCATCAGAGTGGAT 4204
Query 4220 CAGTCACTATTGATGGGTGGTTAAAGGTAGCAGCACCAGCTCAAACCGCGGTTTTGTTCA 4279
||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct 4205 CAGTCACAATTGATGGGTGGTTGAAGGTAGCAGCACCAGCTCAAACTGCGGTTTTGTTCA 4264
Query 4280 AAGAACTCCGGTTAACCCTCCATTCCATTCTCAAAGATCTTATCCGAAAACCTGAGAAAT 4339
|||| |||||||||||||| |||||||||||||||||||| ||||||||||| |||||||
Sbjct 4265 AAGAGCTCCGGTTAACCCTTCATTCCATTCTCAAAGATCTCATCCGAAAACCCGAGAAAT 4324
Query 4340 CAGGTATTGTCCACAACGAAGTCGTCAAATCGATGGTTCATCTTCTTATAGAAGAAGGAA 4399
||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |
Sbjct 4325 CAGGTATTGTCCACAACGAAGTCGTCAAATCTATGGTCCATCTTCTTATAGAAGAAGGCA 4384
Query 4400 AACCGCAACACAAATGAACT-AAAAAGGAA 4428
|||||||||||| ||||||| |||||||||
Sbjct 4385 AACCGCAACACACATGAACTTAAAAAGGAA 4414
> Ahg315392 jgi|Araly1|315392|fgenesh1_pm.C_scaffold_2000425
Length=4257
Score = 2134 bits (1155), Expect = 0.0
Identities = 2043/2456 (83%), Gaps = 123/2456 (5%)
Strand=Plus/Plus
Query 242 CTCAAAAGACAAAGAAACTCAATAATGTCTATGAGAAGCTCTCTTGCGAA-GGTTTCGTT 300
|||| |||| |||||||||||||| | |||| ||||| |||||||||||| ||||| ||
Sbjct 200 CTCAGAAGAGAAAGAAACTCAATAGTCTCTACGAGAATCTCTCTTGCGAAGGGTTT--TT 257
Query 301 -GATGATCAGATTGAACTCGCTCTCTCCTCTCTTA-GAGATGGAGCTACGTTTGAGGCTG 358
||||||||||||||||||||||| |||||||||| || ||||||| ||| ||||| ||
Sbjct 258 AGATGATCAGATTGAACTCGCTCTGTCCTCTCTTAGGA-ATGGAGCAACGCTTGAGACTT 316
Query 359 CACTTGATTGGCTTTGTTTGAATTTGCCGAGTCATGAGTTGCCTGTGAAGTTTTCT-ACT 417
||||||||||||| |||||||| |||||||||||||| ||||| ||||| |||||| ||
Sbjct 317 CACTTGATTGGCTCTGTTTGAACTTGCCGAGTCATGAATTGCCAGTGAACTTTTCTAAC- 375
Query 418 GGAGCTTCTCGTTTTCCTTCCACAGGAGGTTCTGTGG-GTGTGATATCGACCTCACGGGA 476
||||||||||| ||||| |||||||| | ||||||| | ||||||||||||||| || |
Sbjct 376 GGAGCTTCTCGCGTTCCTACCACAGGACGCTCTGTGGCG-GTGATATCGACCTCAAGGAA 434
Query 477 CGATTGGAATGAT-TCTACTG-A-CT-C----T--TCAGT-CAGGGT-A-GAGGAAGA-- 521
|||||||||| | ||| ||| | || | | ||||| |||| | | ||||| ||
Sbjct 435 AGATTGGAATG-TGTCTGCTGAATCTGCTGAATCATCAGTCCAGGTTAAGGAGGAGGATC 493
Query 522 -GGAACCTGCAGTTTTTGTTCGTGTGAAGGGAAAGC-A-A-GATGAAGAAGATACTCTTA 577
|| |||| |||||| ||| | |||||| | |||| | | || |||||||||| |||||
Sbjct 494 CTGAGCCTGAAGTTTTAGTTAGAGTGAAGAGCAAGCGAGATGAAGAAGAAGATAGTCTTA 553
Query 578 GTTC-TGACAAGTCATCTCAAGCTGATTGGATTCGGCAGTATATGATGAGACAGGAAGAG 636
|||| || | | |||||||||||||||||||| || |||||||||| |||| |||||||
Sbjct 554 GTTCTTGTCGA-TCATCTCAAGCTGATTGGATCCGTCAGTATATGAAAAGACTGGAAGAG 612
Query 637 GAAGAATTGGAATGTTGGGAAGATGAAGTAGATGGTATTGACCCCAGAAATAAGGTCTCT 696
||||||||||||| || ||| ||| | | | | | || ||||||| |||
Sbjct 613 GAAGAATTGGAATCTTCGGACGAT---G-A-A--G----G-----AG--ATAAGGTATCT 654
Query 697 GGTCCAAGGCCATTCGATGTGATTGCCAAAGAATACTATTCGGCAAGATC-AGATGCTAT 755
||||||||||| ||||| |||||||||||||| || | || | |||||| | |||||||
Sbjct 655 GGTCCAAGGCCTTTCGAAGTGATTGCCAAAGACTATTGTTTAGAAAGATCTA-ATGCTAT 713
Query 756 AAAAGCAAAGGAG-AAGCGTGATAAAAGAGGACAGGA-GCAAGCAGGCCTAGCCATTCGC 813
||||||||| ||| ||| |||||||||| ||||| || ||||||||||||||||||| ||
Sbjct 714 AAAAGCAAA-GAGAAAGGGTGATAAAAGTGGACA-GAGGCAAGCAGGCCTAGCCATTTGC 771
Query 814 AAGCTCAAGCAAGAGAT-ATCTGATCTTGGGTTATCAGAAGCAATGTTGGAATCTGAATT 872
||||||||||||||||| | || ||||||| |||||||||||| ||||||||||| ||
Sbjct 772 AAGCTCAAGCAAGAGATGA-ATGCTCTTGGGCCATCAGAAGCAATATTGGAATCTGAGTT 830
Query 873 TCAGCGTGA---ACATGCTTTTGAAAGTGCTACAGAACAAGAA-TCAACCTGT-CCCATT 927
||||||||| || | || |||| | |||| |||| ||||| | ||||| | |||| |
Sbjct 831 TCAGCGTGATCGTCAAGATTGTGAAGGCGCTAAAGAAAAAGAAGT-AACCT-TCCCCA-T 887
Query 928 TCC-GATAACCTTCATGAGTCAGTTGATGCTGACGATGTCTCTGTTCAGATGTTAGATAA 986
|| ||| || ||||||||||||| ||||||| | | ||| | ||||| |||| ||| |
Sbjct 888 GCCTGATGACGTTCATGAGTCAGTAAATGCTGATGCTTTCTTTTTTCAGCTGTTTGATGA 947
Query 987 TTTGACCTTGAATACC-AATCCTGCTGAGAGCTATGAGTCTGAGGAAATTCAAACTAAAG 1045
||||||||| || || ||| ||| || ||||| | | |||||||||| |||| ||||||
Sbjct 948 CTTGACCTTGGAT-CCAAATACTGTTGGGAGCTGTAAATCTGAGGAAACTCAACCTAAAG 1006
Query 1046 CTCTTCCCTCAAGTTCCTCGGGACAAGATTTTGTTG-CATCAG-ATGA-AGATTCAGA-G 1101
||||| ||| |||||| ||||| ||||| | |||| | || | |||| || || ||| |
Sbjct 1007 CTCTTTCCTTAAGTTCTTCGGGGCAAGAATCAGTTGTC-TC-GAATGATAG-TTTAGATG 1063
Query 1102 GACGTGGAACTTGGCGATACATTCTTTGAAGAAATTCCGCCTTCTGAAATTTCACCCCAT 1161
| | |||| ||||| ||| ||| | ||||| ||||||||| || | ||| |||||
Sbjct 1064 G-CTTGGACCTTGGTGATTTGTTCGTAGAAGATGTTCCGCCTTATGTACCTTCTTCCCAT 1122
Query 1162 GAACTCCTGGAATTGCAGAAGGAGGAAAAGATGAGAGAACTACGTAGTGAGAAAAATCTG 1221
||| |||||||||| |||||| |||||| |||||||||||| | | ||||||||||||
Sbjct 1123 GAAATCCTGGAATTACAGAAGAAGGAAATTATGAGAGAACTATGCAATGAGAAAAATCTT 1182
Query 1222 GGGAAACTAGATGGTATCTGGAAGAAGGGTGAGGCGCAAAAGATCCCAAAAGCATTTCTC 1281
||||||| | ||| | | | ||||||| ||||||||||||||||| ||||| |||
Sbjct 1183 ACGAAACTA-AAGGT-T-T--TA-CAGGGTGAAGCGCAAAAGATCCCAAAGGCATTGCTC 1236
Query 1282 CATCAATTGTGTCAAAGATCAGGGTGGGAAGCACCAAAGTTCAATAAAGAAACCGGTGAA 1341
||||| |||||||||| |||||||||| |||||||||||||||||||| ||| || |||
Sbjct 1237 CATCAGCTGTGTCAAAGGTCAGGGTGGGTAGCACCAAAGTTCAATAAAGTAACTGGGGAA 1296
Query 1342 GGAAGAAATTTCTCATATACTGTAAGTATTCTGCGCAAAGCCAGTGGGA-GGGGTAAAAA 1400
||||| || ||||||||||| ||||| || |||| ||| | ||| ||| |||||||
Sbjct 1297 GGAAGCAACTTCTCATATACCATAAGTGTTATGCGTAAATCTAGT-GGATTTGGTAAAAG 1355
Query 1401 CAGACAAGCCGGTGGTCTGGTAACTCTCCAACTTCCTCCTAAAGATGAGAATTTTGAATC 1460
||||||||| || |||||||||||| | |||||||||| | ||| |||| ||||||||||
Sbjct 1356 CAGACAAGCTGGGGGTCTGGTAACTATTCAACTTCCTCATCAAGTTGAGGATTTTGAATC 1415
Query 1461 CATCGAGGATGCACAAAACAAAGTTGCAGCATTTGCTCTTCATAAACTTTTTTCTGATTT 1520
|||| ||||||||||||||| |||||| ||||||||||| ||||| || |||||||||||
Sbjct 1416 CATCCAGGATGCACAAAACAGAGTTGCGGCATTTGCTCTCCATAAGCTATTTTCTGATTT 1475
Query 1521 ACCTGTCCACTTTGCAATTACGGAGCCTTATGCTTCTCTAGTTTTGATCTGGAAACAAGA 1580
||||| |||||||||||||| || |||||||| ||||||||||||||||||||||||||
Sbjct 1476 GCCTGTTCACTTTGCAATTACTGAACCTTATGCCTCTCTAGTTTTGATCTGGAAACAAGA 1535
Query 1581 GGAATTGTT-GTGTACTACCATACAAAGCACAGAAGAAGACCGAAGAGCTAATTTTGTTG 1639
||||| ||| | ||| ||||| || || ||||||||| |||||||| || |||||||
Sbjct 1536 GGAATCGTTAG-GTA-TACCA-AC----CAGAGAAGAAGAACGAAGAGCAAAATTTGTTG 1588
Query 1640 ATAAG-TTGCTTGAGG-AGGACAGTTTTAGTTTGACCACTTCGTCGAGTAGCTTTGAGAA 1697
| ||| |||||||||| | |||| ||| || ||||||||||| ||| || || | | ||
Sbjct 1589 A-AAGCTTGCTTGAGGCA-GACAATTTCAGCTTGACCACTTCTTCGTGTGGCATACAAAA 1646
Query 1698 TTCGCTTCCGTTGGTAGACTCCTATGTCAAAGACAAAGATGACTTGGGTGTTGTCAAATC 1757
| | ||||| |||||||||||| ||||||||| || |||||||||| ||||||||||||
Sbjct 1647 TGCACTTCCAATGGTAGACTCCTGTGTCAAAGAGAACGATGACTTGGATGTTGTCAAATC 1706
Query 1758 TAACAACAGAGCTAAAAGAGACTCTTATATAGAGGCTGAGTGTT-TATCTCTCCAACGAA 1816
|||| | |||||||||||| ||| || || || |||| |||| | |||||| ||| ||
Sbjct 1707 TAACCATAGAGCTAAAAGAAACTTTTCCATGGAAACTGAATGTTCT-TCTCTCAAACAAA 1765
Query 1817 AACAAGAAAACAAAAAG-AGAACGCAAAAGTACAAGGACATGTTGAAAACTAGAACTGCT 1875
||||||||||||| ||| || | || ||||||||||| ||||| ||||||||| |||||
Sbjct 1766 AACAAGAAAACAAGAAGAAG-ATGCCGAAGTACAAGGAAATGTTAAAAACTAGAGCTGCT 1824
Query 1876 CTTCCTATATCTGAAGTTAAGAATGG-CATACTCCAGCATCTGAAAGAAAAAGATGTCTT 1934
||||||||||| ||||| ||||| || ||||| ||| | || |||||||||||||||||
Sbjct 1825 CTTCCTATATCAGAAGTGAAGAA-GGATATACTGCAGAAGCTTAAAGAAAAAGATGTCTT 1883
Query 1935 GGTGGTATGCGGAGAAACAGGCTCTGGAAAGACTACACAGGTTCCTCAATTTATATTGGA 1994
|||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct 1884 GGTGGTATGCGGAGAAACAGGCTCCGGAAAGACTACACAGGTTCCTCAATTTATACTGGA 1943
Query 1995 TGATATGATTGATTCGGGGCATGGTGGATACTGTAATATCATATGCACACAACCTCGTCG 2054
||||||||| || |||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct 1944 TGATATGATCGACTCGGGGCATGGTGGATACTGTAATATTATATGCACACAACCTCG--G 2001
Query 2055 GATAGCGGCTATCTCTGTTGCTCAAAGAGTTGCTGATGAGCGTTGTGAATCCTC-TCCAG 2113
| | ||||||||||||||||||||||||||||||||| |||||| |||| |||||
Sbjct 2002 G----C---TATCTCTGTTGCTCAAAGAGTTGCTGATGAGCGCTGTGAA-CCTCCTCCAG 2053
Query 2114 GCTTAGATGACTCATTGGTTGGGTATCAAGTTCGTCTTGAAAGTGCAAGGAGTGACAAGA 2173
|||| ||||| || ||||||| ||||||||||||| | ||| |||||||||||||||||
Sbjct 2054 GCTTTGATGATTCTTTGGTTGCTTATCAAGTTCGTCATCAAAATGCAAGGAGTGACAAGA 2113
Query 2174 CTAGGCTGCTGTTTTGTACTACTGGCATTCTACTGAGGAAACTCGCTGGGG-ATA-GAAC 2231
| |||||||||||||||||||| || ||||| ||||| ||||| | ||||| ||| || |
Sbjct 2114 CAAGGCTGCTGTTTTGTACTACAGGAATTCTCCTGAGAAAACTTG-TGGGGGATAAGA-C 2171
Query 2232 CTTGAACGATGTTACACATATTATAGTTGATGAAGTGCATGAGCGGTCTCTTTTGGGTGA 2291
|||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct 2172 CTTGAAAGATGTTACACATATTATAGTCGATGAAGTGCATGAGCGGTCTCTTATGGGTGA 2231
Query 2292 TTTTCTTCTAATTATTTTGAAGAGCCTGATTGAGAAGCAATCATGCGATAATACATCACG 2351
||||||||| ||||||||||||| | |||||||||||||||| || |||||| ||| ||
Sbjct 2232 TTTTCTTCTCATTATTTTGAAGATCTTGATTGAGAAGCAATCCTGGGATAATGCATTACC 2291
Query 2352 TAAACTGAAAGTTATCCTTATGTCTGCTACTGTTGACGCTGATCTA-TTCTCAAGATATT 2410
|||||||||||||||||||||||| ||||||||||| || ||| | |||||||||||||
Sbjct 2292 TAAACTGAAAGTTATCCTTATGTCCGCTACTGTTGATGCACATC-AGTTCTCAAGATATT 2350
Query 2411 TTGGTCATTGTCCTGTGATCACTGCTCAAGGACGAACACATCCAGTCACTACCCACTTCC 2470
||||||| |||||| | || ||||||||||||||||| || || || ||||| |||| |
Sbjct 2351 TTGGTCAATGTCCTATAATTACTGCTCAAGGACGAACTCACCCGGTTACTACTTACTTTC 2410
Query 2471 TGGAGGAGATTTATGAGAGTATTAACTACCTTCTTGCTCCAGATTCTCCTGCTGCGCTAA 2530
||||||| ||||||||||| | ||| |||||||| ||| ||||||| |||||||| ||||
Sbjct 2411 TGGAGGACATTTATGAGAGGACTAAGTACCTTCTGGCTTCAGATTCACCTGCTGCTCTAA 2470
Query 2531 GATCTGATACATCTATTAAAGACAAGCTTGGTTCTGTAAATGACCGTAGGGGGAAAAAGA 2590
| |||||| |||| |||| |||| |||||||||||||||| | |||||||||||||| ||
Sbjct 2471 GTTCTGATGCATCCATTACAGACGAGCTTGGTTCTGTAAACGTCCGTAGGGGGAAAA-GA 2529
Query 2591 ATCTTGTATTGGCTGGCTGGGGCGAC-GATTATTTGCTTTCAGAGGACTGTCTTAA 2645
||||| | |||||||||||||| ||| | ||||||| ||||||||||| |||||||
Sbjct 2530 ATCTTATGTTGGCTGGCTGGGGAGACAG-TTATTTGGTTTCAGAGGACGGTCTTAA 2584
Score = 1142 bits (618), Expect = 0.0
Identities = 1009/1191 (85%), Gaps = 54/1191 (5%)
Strand=Plus/Plus
Query 3234 AGAGTTATGTCTACAAATCAAATTGCTTGGCTTGGGTCACATTAAACCTTTTCTGTCC-A 3292
|||||| ||| |||| |||||||| |||||||||||||||||||| || ||||||||| |
Sbjct 3101 AGAGTTGTGTTTACATATCAAATTACTTGGCTTGGGTCACATTAAGCCGTTTCTGTCCAA 3160
Query 3293 GG---GCTTTGGAACCTCCGAGTGAAGGTGCTATGACCTCTGCGATTTCATTGTTACATG 3349
|| ||| |||||||||| |||||| ||||||| | |||||| |||| |||||| ||
Sbjct 3161 GGCAAGCTCTGGAACCTCCAAGTGAAAGTGCTATAAACTCTGCAATTTTATTGTTGCAAA 3220
Query 3350 AGGTTGGTGCTGTTGAAGGGGATGAAGAGTTGACACCACTTGGGCATCATTTAGCCAAAC 3409
|||| |||||| |||||||||| ||||||||||||||||| || ||||||||||| ||||
Sbjct 3221 AGGTCGGTGCTCTTGAAGGGGACGAAGAGTTGACACCACTAGGACATCATTTAGCAAAAC 3280
Query 3410 TTCCTGTTGATGTGTTAATTGGAAAGATGCTGTTATACGGTGGAATATTTGGTTGCTTAT 3469
||||||||||| |||| |||||||||||||||||||| ||||| || ||||||| |||||
Sbjct 3281 TTCCTGTTGATTTGTTGATTGGAAAGATGCTGTTATATGGTGGCATTTTTGGTTCCTTAT 3340
Query 3470 CACCTATTCTCTCGATCGCAGCTTTCTTGAGCTACAAATCGCCGTTTATATATCCCAAAG 3529
|||||||||||||||| || ||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct 3341 CACCTATTCTCTCGATTGCTGCTTTCTTGAGCTGCAAATCGCCATTTGTATATTCCAAAG 3400
Query 3530 ATGAGAAGCAAAATGTCGACCGGGTGAAACTTGCTCTTTTGTCTGACAATG-GGGTGAGC 3588
|| | ||||||||||||| || ||||||||||||||||||||||| || | || |||
Sbjct 3401 AT--G-AGCAAAATGTCGATCGCGTGAAACTTGCTCTTTTGTCTGATAA-GCTGGAGAGT 3456
Query 3589 TCAAGTGATTTAAACAACAATGACAGACAATCTGATCACCTCCTTATGATGGTTGCATAC 3648
|| ||| |||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct 3457 TCGAGTAATTTAAACAACAATGACAGACAATCTGATCACCTCCTTGTGGTGGTTGCATAT 3516
Query 3649 GATAAATGGGTGAAGATACTGCAAGAGCGAGGAATGAAAGCTGCACAGAGGTTCTGTGAA 3708
|| |||||||||||||||||||| |||| |||| | ||||||||| ||||||||||||||
Sbjct 3517 GAGAAATGGGTGAAGATACTGCATGAGCAAGGATTTAAAGCTGCAGAGAGGTTCTGTGAA 3576
Query 3709 TCAAAGTTCTTGAGCAGCTCAGTGATGCGGATGATCAGAGACATGAGAGTACAATTTGGC 3768
|||||||| |||| ||||||| |||||| || ||| ||||||| ||||||| | ||||||
Sbjct 3577 TCAAAGTTTTTGAACAGCTCAATGATGCAGACGATAAGAGACAGGAGAGTAGAGTTTGGC 3636
Query 3769 ACATTACTTGCCGACATCGGGCTCATCAATCTTCCTAAAACAGGAGAGTTTTCAGGAAGG 3828
|| ||||||||||||||||||||||||||||||||| || ||| || ||||
Sbjct 3637 TTTTTGCTTGCCGACATCGGGCTCATCAATCTTCCTAAA---GGCGAGGGG--AG-AAGG 3690
Query 3829 AAAAAGGAAAATCTTGATGTCTGGTTTTCTGACCCAACTCAACCTTTCAATATGTATTCA 3888
|| ||| ||||||||||| |||||||||||| |||||||||||||||||||||||||
Sbjct 3691 AA---GGAGAATCTTGATGTTTGGTTTTCTGACAAAACTCAACCTTTCAATATGTATTCA 3747
Query 3889 CA-GCAACCTGAAGTTGTTAAGGCTATACTATGCGCAGGACTATATCCTAATATAGCAGC 3947
|| | |||||||||||||||||||||| ||||||| ||||||| ||||||||| ||||
Sbjct 3748 CAAG-AACCTGAAGTTGTTAAGGCTATTTTATGCGCGGGACTATGTCCTAATATTGCAG- 3805
Query 3948 CAATGATAAAGGAATTACAGAGACAACGTTTAACAGTTTGACAAAGCAAGGAAACCAAAC 4007
| | ||| ||| | || ||| |||| ||||||| || ||| ||||
Sbjct 3806 -A--G-----GGA-TTA--G--------TT-AACCGTTTAACAAAGCCAGCAAAAGAAAC 3845
Query 4008 A-AAGAGCTAC-TCGGCATGGTACGATGGCAGAAGGGAAGTTCATATCCATCCATCTTCC 4065
| || | || | | |||| | ||||||| ||| ||||| |||||| ||| | | ||
Sbjct 3846 AGAAC-GTTATGTAGT-ATGGCATGATGGCAAAAGAGAAGTCCATATCGATCGAACCTCT 3903
Query 4066 ATAAACAGCAACTTCAAAGCATTTCAAAACCCTTTCCTTGTATTCCTTGAGAAGGTGGAA 4125
||||||| |||| |||||| |||||| | ||| || |||| ||||| |||||||| ||
Sbjct 3904 ATAAACAAAAACTGCAAAGCGTTTCAATATCCTCTCATTGTGTTCCTCGAGAAGGTCCAA 3963
Query 4126 ACGAACAAA--G-TATAT-TTGCGAGATACAACCA-TTGTTTCTCC-TTTCTCTATTCTA 4179
| |||||| | ||||| || | ||||||||| | |||||||||| ||| || ||||||
Sbjct 3964 AAAAACAAATTGGTATATCTT-CAAGATACAAC-AGTTGTTTCTCCATTT-TCCATTCTA 4020
Query 4180 CTTTTTGGCGGCTCAATCAATGTTCATCATCAGAGTGGATCAGTCACTATTGATGGGTGG 4239
||||||||||||||| |||||||||||||||||||||||||||| || ||||||||||||
Sbjct 4021 CTTTTTGGCGGCTCAGTCAATGTTCATCATCAGAGTGGATCAGTAACCATTGATGGGTGG 4080
Query 4240 TTAAAGGTAGCAGCACCAGCTCAAACCGCGGTTTTGTTCAAAGAACTCCGGTTAACCCTC 4299
|||||| || |||||||||||||||||||||||||||||||||| || || ||||||||
Sbjct 4081 TTAAAGCTAACAGCACCAGCTCAAACCGCGGTTTTGTTCAAAGAGCTACGACTAACCCTC 4140
Query 4300 CATTCCATTCTCAAAGATCTTATCCGAAAACCTGAGAAATCAGGTATTGTCCACAACGAA 4359
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 4141 CATTCCATTCTCAAAGATCTTATCCGAAAACCTGAGAAATCAGGTATTGTCCATAACGAA 4200
Query 4360 GTCGTCAAATCGATGGTTCATCTTCTTATAGAAGAAGGAAAACCGCAACAC 4410
||||||||||| ||||| |||||||||||||||||||| | ||||||||||
Sbjct 4201 GTCGTCAAATCTATGGTCCATCTTCTTATAGAAGAAGGCAGACCGCAACAC 4251
Score = 688 bits (372), Expect = 0.0
Identities = 464/508 (91%), Gaps = 7/508 (1%)
Strand=Plus/Plus
Query 2704 AAAAGGTTAAACGAGGATAGAATTGACTACGAGCTTCTTGAAGAGTTGATATGCCACATT 2763
||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct 2602 AAAAGGTTAAATGAGGATATTATTGACTATGAGCTTCTTGAAGAGTTGATATGCCACATT 2661
Query 2764 GATGACACTTGTGAGGAAGGAGCCATTCTTATATTTTTGCCTGGAGTGGCAGAAATTTAC 2823
|||||||||||||||||||||||||||||| | |||||||||||| |||||||||| ||
Sbjct 2662 GATGACACTTGTGAGGAAGGAGCCATTCTTGTGTTTTTGCCTGGAATGGCAGAAATCAAC 2721
Query 2824 ATGTTACTCGATATGTTAGCTGCTTCCTATCGTTTTCGTGGACCT-GCTGCAGATTGGCT 2882
||| ||||| ||| |||| |||||||||||| ||||||||||||| | || |||||||||
Sbjct 2722 ATGCTACTCAATAGGTTATCTGCTTCCTATCATTTTCGTGGACCTTG-TGGAGATTGGCT 2780
Query 2883 TCTTCCTCTACATTCTTCTATTGCATCTTCAGAACAGAGAAAGGTGTTTCTGCGTCCCCC 2942
|||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||
Sbjct 2781 TCTTCCTCTACATTCTTCTATTGCATCTACAGAACAGAGAAAAGTGTTTCTGCGCCCCCC 2840
Query 2943 TAAAGGCTTACGGAAGGTTATCGCAGCTACAAATATTGCAGAGACCAGTATAACAATTGA 3002
||||||| || |||||||| || ||||||||||||||| ||||||||||||||||||||
Sbjct 2841 TAAAGGCATAAGGAAGGTTGTCATAGCTACAAATATTGCCGAGACCAGTATAACAATTGA 2900
Query 3003 TGATGTGGTGTATGTGATTGACAGTGGCAAACACAAGGAAAATCGCTACAATCCACAGAA 3062
|||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct 2901 GGATGTGGTTTATGTGATTGACAGTGGAAAACACAAGGAAAATCGCTATAATCCACAGAA 2960
Query 3063 GAAACTGTCGAGCATGGTGGAAGATTGGATATCTCAAGCAAATGCAAGACAAAGAACAGG 3122
|||| |||| |||||||||||||||||| ||||| ||||||||||||||||||||| ||
Sbjct 2961 GAAATTGTCAAGCATGGTGGAAGATTGGGTATCTAAAGCAAATGCAAGACAAAGAATGGG 3020
Query 3123 AAGAGCTGGACGCGTCAAACCTGGG-ATTTGCTTTTCATTGTACACACG-CTATAGGTTC 3180
|||||||||||| ||||||||||| ||| ||||||||||||||||||| | ||||||||
Sbjct 3021 AAGAGCTGGACGTGTCAAACCTGGACATT-GCTTTTCATTGTACACACGTC-ATAGGTTC 3078
Query 3181 GAGAAGCTAATGCGTCCCTATCAG-GTT 3207
|||||||| ||||||||||||||| |||
Sbjct 3079 GAGAAGCTCATGCGTCCCTATCAGAGTT 3106
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 174455914632
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5