BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G58090.1
Length=1116
Score E
Sequences producing significant alignments: (Bits) Value
Ahg925248 jgi|Araly1|925248|scaffold_200809.1 1415 0.0
Ahg925188 jgi|Araly1|925188|scaffold_200749.1 1264 0.0
Ahg907534 jgi|Araly1|907534|Al_scaffold_0002_615 987 0.0
Ahg338425 jgi|Araly1|338425|fgenesh1_pg.C_scaffold_2000524 942 0.0
Ahg314657 jgi|Araly1|314657|fgenesh1_pm.C_scaffold_1003437 529 2e-149
Ahg925189 jgi|Araly1|925189|scaffold_200750.1 481 6e-135
> Ahg925248 jgi|Araly1|925248|scaffold_200809.1
Length=1160
Score = 1415 bits (766), Expect = 0.0
Identities = 1015/1132 (90%), Gaps = 29/1132 (3%)
Strand=Plus/Plus
Query 1 ATGGTGTCGAAAAAGCTTCCATTAGATCTGGAAGAAGAGATACTCTTTCGAGTTCCACCT 60
|||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 21 ATGGTGGCGAGAAAGCTTCCATTAGATCTGGAAGAAGAGATACTCTTTCGAGTTCCACCT 80
Query 61 CGATCTCTCGTTCGCTTCAGATCCGTTTGCAGAGAATGGAACACTCTTTTCAAGAATAAG 120
||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct 81 CGATCTCTCCTTCGCTTCAGATCCGTTTGCAGAGAATGGAACACTCTTTTCCACAATAAG 140
Query 121 AGATTCATCAACAAAAACTTTGCTTGCGGTCGGCCAGAAATCATGTTAAATACACATTCA 180
||||||||||||||||||||||||| |||||| |||||| |||||||||| ||||||||
Sbjct 141 AGATTCATCAACAAAAACTTTGCTTCCGGTCGCCCAGAATTCATGTTAAAGACACATTCC 200
Query 181 CATATTTATTCGATAAGCGTCGATCTCAAAGACGAAAATCCAACTATAAAGGTGCGTGAT 240
||| ||||||| ||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct 201 CATCTTTATTCAATAAGCGTCGATCTC--A-ACGAAAATCCAACTATAAAGGTGCGTGAT 257
Query 241 TTACGCTTTGATCATTTAAGTTGCCGCGGTTATCATCTGTATGGGATCTGCGATGGTAAC 300
|||||||||||||||||| | | ||| |||||||||| |||||| |||||||||| |
Sbjct 258 TTACGCTTTGATCATTTACGCGGTCGCCGTTATCATCTCCATGGGACCTGCGATGGTTAT 317
Query 301 TTCTTCATGTATAG-CTTTCTTAATGGAGGCGGAGGCGTTGTTTGGAACCCGTTGTTTTG 359
|| ||||||||| | ||||| ||| ||||| |||||||| |||| |||||||||| ||
Sbjct 318 TTTTTCATGTAT-GACTTTCATAAAGGAGGTGGAGGCGTGGTTTCGAACCCGTTG--TT- 373
Query 360 GAGACAGACTAAATGGATTGCCAAGGCTGAGAATACATGTGGCAAGGCCATTGGTTACGA 419
|||||| |||||||||||||||||||||||| ||| |||||||| || ||| ||||||||
Sbjct 374 GAGACATACTAAATGGATTGCCAAGGCTGAGTATATATGTGGCAGGGGCATGGGTTACGA 433
Query 420 TGGTAGTAGACCCGAAAAGAGTTACAAGATTA-TCGGA---AGGAGTAGTTGTTCTTGGC 475
|||||||||||||||||||||||||||||||| | ||| ||| | || ||| |||
Sbjct 434 TGGTAGTAGACCCGAAAAGAGTTACAAGATTATTGGGATGTCGGAAT-GTCATTCGTGGG 492
Query 476 AGGGTAAAGTTACTGA-TACATATTCAGTCTTCGAATTTGCAACCAATGCGTGGAAGGTT 534
| || || ||||| | ||||||||||| ||||||||||||||||||||||||||||
Sbjct 493 ATGG--AA-TTACT-ACGACATATTCAGTAGCCGAATTTGCAACCAATGCGTGGAAGGTT 548
Query 535 ACTGATCATACCCGTTTTCACGAAAAGCCAGAATTAAT--G-G--AC----GACT-CCGG 584
|||||||||||||||||| | ||| ||| ||| ||||| | | || || | ||
Sbjct 549 ACTGATCATACCCGTTTTAAAGAAGAGCTAGAGTTAATAAGCGAAACGTGTGA-TAATGG 607
Query 585 TAGGGTCTCCCTGAATGGAAATTTGTACTGGACAGCTTATAATTCTCCCCACACTGGTCA 644
||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||
Sbjct 608 TAGGGTCTCCCTGAATGGAAATTTGTACTGGACAGCTTATACTTATCCCCAAACTGGTCA 667
Query 645 GTATTTCATCGCAATGCTCGATTTTTCGAAAGAGATAGAAAAGAGTCGAAAGACCTTTTG 704
|||||||||| ||||||||||||||||||||||||||||| | ||| ||||||||||||
Sbjct 668 GTATTTCATCTTAATGCTCGATTTTTCGAAAGAGATAGAAATGTGTCAAAAGACCTTTTG 727
Query 705 TGTTTTACCGTGTAAGGGGGAAAAAAGTACTACACATACTCGTATCCTCTCGATTTACAA 764
||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct 728 TGTTTTACCGTGTAAGGGGAAAAAAAGTACTACACATACTCGTATTCTCTCGATTTACAA 787
Query 765 GGGAGATCGGTTTTCAGTGTTAGAACAATCCaaaaaaaCAAGGGAGATTGAGATTTGGGT 824
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 788 GGGAGATCGGTTTTCAGTGTTAGAACAATCCAAAAAAACAAGAGAGATTGAGATTTGGGT 847
Query 825 GACAAAGGATCAAATTGGTAACGGGGATGATGGAGACGATGTGGTGTGGATTAAGTTCAT 884
|||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 848 GACAAAGGATAAAATTGGTAACGGGGATGATGGAGACCATGTGGTGTGGATTAAGTTCAT 907
Query 885 GACAGTCTCAAGACCTGACTTCCCCATATTACTTAGTTACATCTCTACAAGTTACTTTGT 944
||| |||||| ||||||||||||||| |||||| || ||| | || |||| ||||| ||
Sbjct 908 GACTTTCTCAATACCTGACTTCCCCATGTTACTTTGTAACAGCCCTGCAAGATACTTCGT 967
Query 945 CGATAATGATATCCATGGGAAGAGCTTTGTTCTGTGTTGTCCTAGCAAGAGACCTAAAGC 1004
|||||| |||| |||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct 968 GGATAATAATATATATGGAAAGAGCTTTGTTCTGTGTTGTCCAAGCAAGAGACCTAAAGC 1027
Query 1005 AGCTTGGGTGTATATTGTGAGGGGAGATTTGTGCAAAAAGATTAAGATAGATCAAGTGCT 1064
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1028 AGCTTGGGTGTATATTGTGAGGGGAGATATGTGCAAAAAGATTAAGATAGATCAAGTGCT 1087
Query 1065 ATGTGAGTTTCAATCCTCTGTCTATGTTCCCAGTTTGATCACCATTCCTTGA 1116
||||||||| | ||||||||||||||||| |||||||||||||||||||||
Sbjct 1088 GTGTGAGTTTGAGTCCTCTGTCTATGTTCCAAGTTTGATCACCATTCCTTGA 1139
> Ahg925188 jgi|Araly1|925188|scaffold_200749.1
Length=1154
Score = 1264 bits (684), Expect = 0.0
Identities = 995/1138 (87%), Gaps = 50/1138 (4%)
Strand=Plus/Plus
Query 1 ATGGTGTCGAAAAAGCTTCCATTAGATCTGGAAGAAGAGATACTCTTTCGAGTTCCACCT 60
|||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 25 ATGGTGGAGAGAAAGCTTCCATTAGATCTGGAAGAAGAGATACTCTTTCGAGTTCCACCT 84
Query 61 CGATCTCTCGTTCGCTTCAGATCCGTTTGCAGAGAATGGAACACTCTTTTCAAGAATAAG 120
||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct 85 CGATCTCTCCTTCGCTTCAGATCCGTTTGCAGAGAATGGAACACTCTTTTCCACAATAAG 144
Query 121 AGATTCATCAACAAAAACTTTGCTTGCGGTCGGCCAGAAATCATGTTAAATACACATTCA 180
|||||||||||||||||||||||||||| ||| |||||| |||||||||| || ||||
Sbjct 145 AGATTCATCAACAAAAACTTTGCTTGCGCTCGCCCAGAATTCATGTTAAAGACTTATTCC 204
Query 181 CATATTTATTCGATAAGCGTCGATCTCAAAGACGAAAATCCAACTATAAAGGTGCGTGAT 240
||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct 205 CATATTTATTCGATAAGCGTCGATCTCAACGACG---ATCCAACTATAAAGGTGCGTGAT 261
Query 241 TTACGCTTTGATCATTTAAGTTGCCGCGGTTATCATCTGTATGGGATCTGCGATGGTAAC 300
||||||||||||| ||| | |||||| || | ||| |||| ||||||||||
Sbjct 262 TTACGCTTTGATCCTTT-A-----CGCGGTCGCCA--T-TAT--AATCT-CGATGGTAAC 309
Query 301 TTCTTCATGTATAG-CTTTC-TTAATGGAGGCGGAGGCGTTGTTTGGAACCCGTTGTTTT 358
|||||| ||||| | ||||| | || ||||||||| |||| |||| |||||||||| ||
Sbjct 310 TTCTTCTTGTAT-GACTTTCATGAA-GGAGGCGGATGCGTGGTTTCGAACCCGTTG--TT 365
Query 359 GGAGACAGACTAAATGGATTGCCAAGGCTGAGAATACATGTGGCAAGGCCATTGGTTACG 418
|||||||| ||||||| |||| |||||| |||||| |||||||||| ||| |||||||
Sbjct 366 -GAGACAGAATAAATGGTTTGCAAAGGCTAAGAATATATGTGGCAAGTACATGGGTTACG 424
Query 419 ATGGTAGTAGACCCGAAAAGAGTTACAAGATTA-TCGGAAG-GAGTA-GTTGTTC-TTGG 474
||||||||||||||||||||||||||||||||| | ||| | | | | || ||| |||
Sbjct 425 ATGGTAGTAGACCCGAAAAGAGTTACAAGATTATTGGGATGTGGGAACGTCATTCGCTGG 484
Query 475 CAGGGTAAAGTTACTGA-TACATATTCAGTCTTCGAATTTGCAACCAATGC---GTGGAA 530
| || || ||||| | ||||||| ||||| |||||||||| ||||||| |||||
Sbjct 485 -ATGG--AA-TTACT-ACGACATATTTAGTCTCCGAATTTGCAGCCAATGCTTACTGGAA 539
Query 531 GGTTACTGATCATACCCGTTTTCACGAAAAGCCAGAATTAATGGA-CGA--C-TCCGG-- 584
|||||||||||||||| ||||| ||||| |||||| ||| | ||| || | |||||
Sbjct 540 GGTTACTGATCATACCAGTTTTTACGAAGAGCCAGCATTTA-GGAGTGACTCGTCCGGTA 598
Query 585 ----TAGGGTCTCCCTGAATGGAAATTTGTACTGGACAGCTTATAATTCTCCCCACACTG 640
||||||||||||||||||||||||||||||||||||| ||| || |||| | ||||
Sbjct 599 ATAATAGGGTCTCCCTGAATGGAAATTTGTACTGGACAGCTCATACTTATCCCGAAACTG 658
Query 641 GTCAGTATTTCATC-GCAATGCTCGATTTTTCGAAAGAGATAGAAAAGAGTCGAAAGACC 699
|||||||||||||| | ||||||||||||||||||||||||||||| | ||| ||||||
Sbjct 659 GTCAGTATTTCATCAG-AATGCTCGATTTTTCGAAAGAGATAGAAATGTGTCAAAAGACA 717
Query 700 TTTTGTGTTTTACCGTGTAAGGGGGAAAAAAGTACTACACATACTCGTATCCTCTCGATT 759
|| ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct 718 TTCTGTGTTTTACCGTGTAAGGAAAAAAAAAGTACTACACATACTCGTGTCCTCTCGATG 777
Query 760 TACAAGGGAGATCGGTTTTCAGTGTTAGAACAATCCaaaaaaaCAAGGGAGATTGAGATT 819
||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct 778 TACAAGGGAGATCGGTTTTCAGTGTTAGAACAATCCAGAAAAACAAGAGAGATTGAGATT 837
Query 820 TGGGTGACAAAGGATCAAATTGGTAACGGGGATGATGGAGACGATGTGGTGTGGATTAAG 879
||||||||||||||| ||||| |||| | |||| ||||||| || |||||||||||||||
Sbjct 838 TGGGTGACAAAGGATAAAATTAGTAATGCGGATAATGGAGATGACGTGGTGTGGATTAAG 897
Query 880 TTCATGACAGTCTCAAGACCTGACTTCCCCATATTACTTAGTTACATCTCTACAAGTTAC 939
|||||||| ||||||| |||||||||||| || |||||||| |||| ||||||| ||
Sbjct 898 TTCATGACGGTCTCAATACCTGACTTCCCTATGGTACTTAGTCACATGTCTACAAAATA- 956
Query 940 TTT-GTCGATAATGATATCCATGGGAAGAGCTTTGTTCTGTGTTGTCCTAGCAAGAGACC 998
||| ||||||||| ||||| |||| ||||||||||||||||||||||| ||||||| |||
Sbjct 957 TTTCGTCGATAATAATATCTATGGAAAGAGCTTTGTTCTGTGTTGTCCAAGCAAGATACC 1016
Query 999 TAAAGCAGCTTGGGTGTATATTGTGAGGGGAGATTTGTGCAAAAAGATTAAGATAGATCA 1058
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1017 TAAAGCAGCTTGGGTGTATATTGTGAGGGGAGATCTGTGCAAAAAGATTAAGATAGATCA 1076
Query 1059 AGTGCTATGTGAGTTTCAATCCTCTGTCTATGTTCCCAGTTTGATCACCATTCCTTGA 1116
|||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||
Sbjct 1077 AGTGCTATGTGAGTTTGAGTCCTCTGTCTATGTTCCAAGTTTGATCACCATTCCTTGA 1134
> Ahg907534 jgi|Araly1|907534|Al_scaffold_0002_615
Length=1092
Score = 987 bits (534), Expect = 0.0
Identities = 939/1125 (83%), Gaps = 65/1125 (6%)
Strand=Plus/Plus
Query 8 CGAAAAAGCTTCCATTAGATCTGGAAGAAGAGATACTCTTTCGAGTTCCACCTCGATCTC 67
||| ||||||||||| ||| || ||||| ||||||||||| ||||| |||||||||||||
Sbjct 17 CGAGAAAGCTTCCATCAGAGCTAGAAGAGGAGATACTCTTCCGAGTGCCACCTCGATCTC 76
Query 68 TCGTTCGCTTCAGATCCGTTTGCAGAGAATGGAACACTCTTTTCAAGAATAAGAGATTCA 127
|||||||||||||||||||||||| ||| ||||||||||||||| | |||||||||||||
Sbjct 77 TCGTTCGCTTCAGATCCGTTTGCAAAGAGTGGAACACTCTTTTCCACAATAAGAGATTCA 136
Query 128 TCAACAAAAACTTTGCTTGCGGTCGGCCAGAAATCATGTTAAATACACATTCACATATTT 187
|||||||||||||||||||| ||| |||||| || |||||| |||||||| |||||||
Sbjct 137 TCAACAAAAACTTTGCTTGCAATCGCCCAGAATTCGTGTTAACGACACATTCCCATATTT 196
Query 188 ATTCGATAAGCGTCGATCTCAAAGACGAAAATCCAACTAT-AAAGGTGCGTGATTTACGC 246
|||||||||||||| ||||||| |||| |||||||||| ||| |||| |||||| ||
Sbjct 197 ATTCGATAAGCGTCAATCTCAATGACG---ATCCAACTATGAAA-GTGCACGATTTATGC 252
Query 247 TTTGATCATTTA-AGTTGCCGCGGTTA-TCATCTGTATGGGATC-TGCGATGGTAAC--- 300
||| ||||| | | | | |||| || ||| ||||||| | ||||||||||||
Sbjct 253 GTTG---ATTTACA-CCGTCTCCGTTATTC-TCTCTATGGGA-CTTGCGATGGTAACTTA 306
Query 301 TTCTTCATGTATAGCTTTCTTAATGGAGGCGGAGGCGTTGTTTGGAACCCGTTGTTTTGG 360
|||||||||||| | ||||| | | ||||||| ||||||||||||||| || |
Sbjct 307 TTCTTCATGTAT-G-ATTCTT-A--CA-AAAGAGGCGTGGTTTGGAACCCGTTG--TT-G 357
Query 361 AGACAGACTAAATGGATTGCCAAGGCTGAGAATACATGTGGCAAGG-CCATTGGTTACGA 419
||| ||||||||| ||||||||||| |||||||| ||||||| ||| ||| ||||||||
Sbjct 358 AGAAAGACTAAATTGATTGCCAAGGATGAGAATATATGTGGC-AGGAGCATGGGTTACGA 416
Query 420 TGGTAGTAGACCCGAAAAGAGTTACAAGATTATCGGAAGGAGTAGTTGTTCTTGGCAGGG 479
||||||||||||||||||||||||||||||||| ||| | | ||| | || ||
Sbjct 417 TGGTAGTAGACCCGAAAAGAGTTACAAGATTATTGGACGTTGCAGTACTAATT-----GG 471
Query 480 TAAAGTTACTGATACATATT-CAGTCTTCG-AATTTGCAACCAATGCGTGGAAGGTTACT 537
| | | | ||| | || ||||||| | |||||||||||||||| ||||||||||||
Sbjct 472 T--A--T-C--ATAGA-GTTGCAGTCTT-GAAATTTGCAACCAATGCCTGGAAGGTTACT 522
Query 538 GATCATACCCGTTTTCACGAAAAGCCAGAATTAATGGA--CGACTCCGGTAGGGTCTCCC 595
||| |||| ||||| |||| || | ||| | | || | | | | |||||||||||
Sbjct 523 CATCGTACCAGTTTTGGCGAAGAGTTACAATCACTCGACTCTAATTC--TAGGGTCTCCC 580
Query 596 TGAATGGAAATTTGTACTGGACAGCTTATAATTCTCCCCACACTGGTCAGTATTTCATCG 655
|||||||||||||||||| ||||| ||| || | |||| |||||||||||| ||||||||
Sbjct 581 TGAATGGAAATTTGTACTTGACAGGTTACAAATATCCCTACACTGGTCAGTGTTTCATCG 640
Query 656 CAATGCTCGATTTTTCGAAAGAGATAGAAAAGAGTCGAAAGACCTTTTGTGTTTTACCGT 715
|||||||||||||||||||||||| | | | ||||| ||||||| | ||||||
Sbjct 641 AAATGCTCGATTTTTCGAAAGAGAT-----A-A-T--AAAGATCTTTTGTATGCTACCGT 691
Query 716 GTAAGGGGGAAAAAA-GTACTACACATACTCGTATCCTCTCGATTTACAAGGGAGATCGG 774
|||| ||| |||||| ||||| | ||||||||||| || |||||||||||||||||||||
Sbjct 692 GTAA-GGGAAAAAAAGGTACTTCCCATACTCGTATGCTTTCGATTTACAAGGGAGATCGG 750
Query 775 TTTTCAGTGTTAGAACAATCCaaaaaaaCAAGG-GAGATTGAGATTTGGGTGACAAAGGA 833
|||||||||||| |||||| ||||| |||| || |||||| |||||||||||||| || |
Sbjct 751 TTTTCAGTGTTACAACAATGCAAAAGAACA-GGCGAGATTAAGATTTGGGTGACAGAGAA 809
Query 834 TCAAATTGGTAACGGGGATGATGGAGACGATGTGGTGTGGATTAAGTTCATGACAGTCTC 893
|||||||||| |||||||| |||||| |||||||||||||||| |||||||| |||||
Sbjct 810 GAAAATTGGTAATGGGGATGACGGAGACAATGTGGTGTGGATTAATTTCATGACTGTCTC 869
Query 894 AAGACCTGACTTCCCCATATTACTTAGTTACATCTCTACAAGTTACTTTGTCGATAATGA 953
||||||||||||||||| |||||||| | ||| |||||||||||||||||||||||| |
Sbjct 870 AAGACCTGACTTCCCCAAATTACTTACTCCCATGTCTACAAGTTACTTTGTCGATAATAA 929
Query 954 TATCCATGGGAAGAGCTTTGTTCTGTGTTGTCC-TAGCAAGAGACCTAAAGCA-GCTTGG 1011
|||| ||||||||||||| ||||||||||| | |||||||| ||||| | || ||||||
Sbjct 930 TATCTATGGGAAGAGCTTCGTTCTGTGTTG-CAATAGCAAGAAACCTAGA-CAAGCTTGG 987
Query 1012 GTGTATATTGTGAGGGGAGATTTGTGCAAAAAGATTAAGATAGATCAAGTGCTATGTGAG 1071
||||||||||||||||||||| ||||||||||||||||||||| | |||| |||| ||
Sbjct 988 GTGTATATTGTGAGGGGAGATATGTGCAAAAAGATTAAGATAGGTGGAGTGGTATGCAAG 1047
Query 1072 TTTCAATCCTCTGTCTATGTTCCCAGTTTGATCACCATTCCTTGA 1116
|||||||||||| | |||||||||||||||||||||||| |||||
Sbjct 1048 TTTCAATCCTCTTTTTATGTTCCCAGTTTGATCACCATTTCTTGA 1092
> Ahg338425 jgi|Araly1|338425|fgenesh1_pg.C_scaffold_2000524
Length=1101
Score = 942 bits (510), Expect = 0.0
Identities = 897/1072 (84%), Gaps = 74/1072 (7%)
Strand=Plus/Plus
Query 1 ATGGTGTCGAAAAAGCTTCCATTAGATCTGGAAGAAGAGATACTCTTTCGAGTTCCACCT 60
|||||| ||| |||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct 1 ATGGTGGCGAGAAAGCTTCCATTAGATCTGGAAGAAGAGATACTCATTCGTGTTCCACCT 60
Query 61 CGATCTCTCGTTCGCTTCAGATCCGTTTGCAGAGAATGGAACACTCTTTTCAAGAATAAG 120
||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||
Sbjct 61 CGATCTCTCGTTCGCTTCAGATCCGTTTGCAAAGAATGGAACACTCTTTTCCACAATAAG 120
Query 121 AGATTCATCAACAAAAACTTTGCTTGCGGTCGGCCAGAAATCATGTTAAATACACATTCA 180
|||||| | |||||||||||||||| ||||| |||||| |||||||||| ||||||||
Sbjct 121 AGATTCGCCGACAAAAACTTTGCTTGTGGTCGCCCAGAATTCATGTTAAAGACACATTCC 180
Query 181 CATATTTATTCGATAAGCGTCGATCTCAAAGACGAAAATCCAACTATAAAGGTGCGTGAT 240
||||||||||||||||||||| ||||||| ||| ||||||||| |||| |||||||||
Sbjct 181 CATATTTATTCGATAAGCGTCAATCTCAATGAC---AATCCAACTGTAAAAGTGCGTGAT 237
Query 241 TTACGCTTTGATCATTTAAGTTGCCGCGGTTATCATCT-GTATGGG-ATCTGCGATGGTA 298
||| |||||| ||||| | | || |||||||| | |||||| || |||||||||
Sbjct 238 TTATGCTTTG---ATTTATGCGGTAGCCGTTATCAT-TACTATGGGAAT-TGCGATGGTT 292
Query 299 ACTTCTTCATGTATAGCTTTCTTAATGGA-GGCGGAGGCGTTGTTTGGAACCCGTTGTTT 357
|||||||||||||| | | | | || | |||||||| |||||||||||| | |||
Sbjct 293 ACTTCTTCATGTAT-G---AC-T-A-CGACGAAGGAGGCGTGGTTTGGAACCCG-T-TTT 343
Query 358 TGGAGACAGACTAAATGGATTGCCAAGGCTGAGAATACATGTGGCAAGGCCATTGGTTAC 417
| ||||||||||||| |||||||| || |||| | |||||||||| | || |||||
Sbjct 344 T-GAGACAGACTAAAAGGATTGCCGCGGATGAGTCTTCATGTGGCAAAGAGATGGGTTAT 402
Query 418 GATGGTAGTAGACCCGAAAAGAGTTACAAGATTATCGGAAGGAGTAGTTGTTCTTGGCAG 477
||||||||||||||||||||||||||||||||||| | | | |||| |||
Sbjct 403 GATGGTAGTAGACCCGAAAAGAGTTACAAGATTAT-----TG-G-A--CGTTC----CAG 449
Query 478 -GGTAAAGTTACTGATACAT--A-TT-CAGTCTTCGAATTTGCAACCAATGCGT-GGAAG 531
|| || || | ||| ||| | || ||||||||||||||||||||||||| | ||||
Sbjct 450 TAGT-AA-TT-C-GATCCATAGAGTTGCAGTCTTCGAATTTGCAACCAATGCATGGGAA- 504
Query 532 GTTACTGATCATACCCGTTTTCACGAAAAGCCAGA-ATTA-ATGGACGACTCCG-GTAGG 588
|||||| ||| |||| ||||| |||| | | | || | | ||||||| || ||
Sbjct 505 GTTACTCATCGTACCAGTTTTGGCGAAGTGTTA-ACATCACA-CGACGACT-CGTCTACC 561
Query 589 GTCTCCCTGAATGGAAATTTGTACTGGACAGCTTATAATTCTCCCCACACTGGTCAGTAT 648
|||||||||||||||||| |||||||||||| |||||| | |||| | ||||||||||||
Sbjct 562 GTCTCCCTGAATGGAAATGTGTACTGGACAGGTTATAAATATCCCGAAACTGGTCAGTAT 621
Query 649 TTCATCGCAATGCTCGATTTTTCGAAAGAGATAGAAAAGAGTCGAAAGACCTTTTGTGTT 708
||||||| |||||||||||||||||||||| | | | | ||||| ||||||||||
Sbjct 622 TTCATCGAAATGCTCGATTTTTCGAAAGAG---G--TA-A-T--AAAGATCTTTTGTGTT 672
Query 709 TTACCGTGTAAGGGGGAAAAAA-GTACTACACATAC-TCGTATCCTCTCGATTTACAAGG 766
||||||||||| |||||||||| || || | ||| | |||||| ||||||||||||||||
Sbjct 673 TTACCGTGTAA-GGGGAAAAAATGTGCTTCCCAT-CATCGTATGCTCTCGATTTACAAGG 730
Query 767 GAGATCGGTTTTCAGTGTTAGAACAATCCaaaaaaaCAAGGGAGATTGAGATTTGGGTGA 826
|||||||||||||||||||| |||||| || || |||||| |||||| ||||||||||||
Sbjct 731 GAGATCGGTTTTCAGTGTTACAACAATGCACAAGAACAAGCGAGATTAAGATTTGGGTGA 790
Query 827 CAAAGGATCAAATTGGTAACGGGGATGATGGAGACGATGTGGTGTGGATTAAGTTCATGA 886
|| || | |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 791 CAGAGAAGAAAATTGGTAACGGGGATGATGGAGACAATGTGGTGTGGATTAAGTTCATGA 850
Query 887 CAGTCTCAAGACCTGACTTCCCCATATTACTTAGTTACATCTCTACAAGTTACTTTGTCG 946
| ||||||||||||||| ||||||| ||||||||| || | ||||||||||| ||||
Sbjct 851 CTGTCTCAAGACCTGACCTCCCCATGTTACTTAGT--CA-C---ACAAGTTACTTCGTCG 904
Query 947 ATAATGATATCCATGGGAAGAGCTTTGTTCTGTGTTGTCC-TAGCAAGAGACCTAAAGCA 1005
|| || ||||| ||||||||||||| ||||||||||| | |||||||| ||||| | ||
Sbjct 905 ATGATAATATCTATGGGAAGAGCTTCGTTCTGTGTTG-CAATAGCAAGAAACCTAGA-CA 962
Query 1006 -GCTTGGGTGTATATTGTGAGGGGAGATTTGTGCAAAAAGATTAAGATAGAT 1056
|||||||| |||||||||||||||||| |||||||||||||||||||||||
Sbjct 963 AGCTTGGGTCTATATTGTGAGGGGAGATATGTGCAAAAAGATTAAGATAGAT 1014
> Ahg314657 jgi|Araly1|314657|fgenesh1_pm.C_scaffold_1003437
Length=450
Score = 529 bits (286), Expect = 2e-149
Identities = 406/462 (88%), Gaps = 15/462 (3%)
Strand=Plus/Plus
Query 658 ATGCTCGATTTTTCGAAAGAGATAGAAAAGAGTCGAAAGACCTTTTGTGTTTTACCGTGT 717
|||||||||||||||||||||| | ||||| | | |||||| || ||||||||
Sbjct 1 ATGCTCGATTTTTCGAAAGAGACATTAAAGA-T-----G---TTTTGTATTCTACCGTGT 51
Query 718 AAGGGGGAAAAAAGTACTACACATACTCGTATCCTCTCGATTTACAAGGGAGATCGGTTT 777
|||| | |||||||| |||||||||||||||||||||| |||||||||||||||||||||
Sbjct 52 AAGGCGAAAAAAAGTTCTACACATACTCGTATCCTCTCTATTTACAAGGGAGATCGGTTT 111
Query 778 TCAGTGTTAGAACAATCCaaaaaaaCAAGGGAGATTGAGATTTGGGTGACAAAGGATCAA 837
|||||| | ||||||| ||||| ||||||||||||||||||||||||||||||| || ||
Sbjct 112 TCAGTGATGGAACAATGCAAAAGAACAAGGGAGATTGAGATTTGGGTGACAAAGAATAAA 171
Query 838 ATTGGTAACGGGGATGATGGAGACGATGTGGTGTGGATTAAGTTCATGACAGTCTCAAGA 897
|||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||| |
Sbjct 172 ATTGGTAATGGGGATGATGGAGACGATGTCGTGTGGATTAAGTTCATGACTGTCTCAATA 231
Query 898 CCTGACTTCCCCATATTACTTAGTTAC-ATCTCTACAAGTTACTTTGTCGATAATGATAT 956
||| |||||||| | |||||| | || || |||||||||||||| |||||| || ||||
Sbjct 232 CCTAACTTCCCCTTGGTACTTAATCACTAT-TCTACAAGTTACTTCGTCGATGATAATAT 290
Query 957 CCATGGGAAGAGCTTTGTTCTGTGTTGTCCTAGCAAGAGACCTAAAGCA-GCTTGGGTGT 1015
| ||||||||||||| ||||| |||||||||| ||||| ||||||| || |||||||| |
Sbjct 291 CTATGGGAAGAGCTTCGTTCTATGTTGTCCTACCAAGAAACCTAAA-CAAGCTTGGGT-T 348
Query 1016 -ATATTGTGAGGGGAGATTTGTGCAAAAAGATTAAGATAGATCAAGTGCTATGTGAGTTT 1074
||||||||||||||||| ||| ||||||||||||||||||| ||||| |||| |||||
Sbjct 349 CATATTGTGAGGGGAGATCTGTACAAAAAGATTAAGATAGATGAAGTGGTATGCAAGTTT 408
Query 1075 CAATCCTCTGTCTATGTTCCCAGTTTGATCACCATTCCTTGA 1116
|||||||||||| ||||||||||||||||||||||||||||
Sbjct 409 GAATCCTCTGTCTTTGTTCCCAGTTTGATCACCATTCCTTGA 450
> Ahg925189 jgi|Araly1|925189|scaffold_200750.1
Length=1070
Score = 481 bits (260), Expect = 6e-135
Identities = 537/660 (81%), Gaps = 61/660 (9%)
Strand=Plus/Plus
Query 1 ATGGTGTCGAAAAAGCTTCCATTAGATCTGGAAGAAGAGATACTCTTTCGAGTTCCACCT 60
|||||| | | ||||||||| | ||||||||||||||||||||||||||||||||| |||
Sbjct 22 ATGGTGCCCAGAAAGCTTCCGTCAGATCTGGAAGAAGAGATACTCTTTCGAGTTCCGCCT 81
Query 61 CGATCTCTCG-TTCGCTTCAGATCCGTTTGCAGAGAATGGAACACTCTTTTCAAGAATAA 119
| ||||||| || ||| |||||| ||||||| ||||||||||||||||||||| |||||
Sbjct 82 CTATCTCTCCATT-GCTACAGATCTGTTTGCAAAGAATGGAACACTCTTTTCAACAATAA 140
Query 120 GAGATTCATCAACAAAAACTTTGCTTGCGGTCGGCCA-GAAATCATGTTAAATACACATT 178
||||||| || |||||||||| |||||||||| ||| ||| ||||||||| |||||||
Sbjct 141 GAGATTCGTCCACAAAAACTTAGCTTGCGGTCC-CCAAGAATTCATGTTAAGGACACATT 199
Query 179 CACATATTTATTCGATAAGCGTCGATCTCAAAGACGAAAATCCAACTATAAAGGTGCGTG 238
| |||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||
Sbjct 200 CCCATATTTATTCGATAAGCATCGATCTCAACGACGA---TCCAACTATAAAGGTGCGTG 256
Query 239 ATTTACGCTTTGA-TCATTTAAGTTGCCGCGGTTATCATCT-GTATGGGATCTGCGATGG 296
|| |||||||| | | || ||| ||||||||| | | |||| || ||||||
Sbjct 257 AT---CGCTTTGAGTTACCCG-GTAACCG---TTATCATCTCGAA-GGGACCTACGATGG 308
Query 297 TAACTTCTTCATGTAT-AGCTTTCTTAATGGAGGCGGAGGCGTTGTTTGGAACCCGTTGT 355
|||||||||||||||| | ||||| ||| |||||| || ||| |||| |||||||||||
Sbjct 309 TAACTTCTTCATGTATGA-CTTTCATAAAGGAGGC--AG-CGTGGTTTCGAACCCGTTGT 364
Query 356 TTTGGAGACAGACTAAATGGATTGCCAAGGCTGAGAATACATGTGGCAAG-GCCATTGGT 414
| | |||||||||||||||||| || || ||||| || |||| ||| | || || |||
Sbjct 365 T--G-AGACAGACTAAATGGATTCCCGCGGATGAGATTATATGTAGCATGAGC-ATGGGT 420
Query 415 TACGATGGTAGTAGACCCGAAAAGAGTTACAAG-ATTATCGG--A-AGGAGT-AG--T-- 465
|||||||||||||||||||||| |||||||| | |||||||| | | ||| | |
Sbjct 421 TACGATGGTAGTAGACCCGAAACGAGTTACA-GTATTATCGGTGATAATAGTTATAATAC 479
Query 466 TGTTC-TT-GGCAGGGTAAAGTTACT-GATACATATT-CAGTCTTCGAATTTGCAACCAA 521
|| || || ||| ||||||||||||| | | || || ||||||||||||||||||||||
Sbjct 480 TGATCATTTGGC-GGGTAAAGTTACTAGG-AGAT-TTGCAGTCTTCGAATTTGCAACCAA 536
Query 522 TGCGTGGAAGGTTACTGATCATACCCGTTTTCACGAAA-AG-C-CA----GAATTAAT-G 573
||| |||||| ||||| | |||||| |||||| | || || | || |||||||| |
Sbjct 537 TGCCTGGAAGATTACTAACCATACCAGTTTTCTC-AAGGAGTCACACTCAGAATTAATAG 595
Query 574 -GAC-GACTCCGGTA---GGGTCTCCCTGAATGGAAATTTGTACTGGACAGCTTATAATT 628
| | || | | || ||||||||||||||||||||||||||||||| ||||||||||
Sbjct 596 TGTCCGA-TA-G-TAACAGGGTCTCCCTGAATGGAAATTTGTACTGGACTGCTTATAATT 652
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 41592102447
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5