BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G58400.1
Length=2703
Score E
Sequences producing significant alignments: (Bits) Value
Ahg907562 jgi|Araly1|907562|Al_scaffold_0002_643 1031 0.0
Ahg907577 jgi|Araly1|907577|Al_scaffold_0002_658 1005 0.0
Ahg914885 jgi|Araly1|914885|Al_scaffold_0001_5139 549 4e-155
Ahg907496 jgi|Araly1|907496|Al_scaffold_0002_577 287 3e-76
Ahg475351 jgi|Araly1|475351|fgenesh2_kg.2__481__AT1G59620.1 246 5e-64
Ahg907578 jgi|Araly1|907578|Al_scaffold_0002_659 161 2e-38
> Ahg907562 jgi|Araly1|907562|Al_scaffold_0002_643
Length=2619
Score = 1031 bits (558), Expect = 0.0
Identities = 1340/1703 (79%), Gaps = 112/1703 (7%)
Strand=Plus/Plus
Query 909 ATATGTCAACTTTAAACCAGAATGCCTAACTATTCTAGAGAGTTGGATACTTTTCCAAAG 968
|||| ||||||| |||| |||||| ||||| | | ||| ||||||| |||||| |||||
Sbjct 951 ATATATCAACTTAAAACTAGAATGTCTAACCACTAAAGACAGTTGGACACTTTTTCAAAG 1010
Query 969 AATTGCAATGCCAAGGGTAGATGAATCAGAATTCAAGGTTGATAAGGAAATGGAA-ATGA 1027
|| ||| | || | ||||| ||||||||| ||| ||||| ||||||||||| | ||
Sbjct 1011 GATAGCACTTCCTATAAAAGATGCATCAGAATTTAAGATTGATGAGGAAATGGAAGA-GA 1069
Query 1028 TGGGTAAGCAAATGATTAAATATTGTGGAGGACTACCATTGGCCGTCAAAGTGTTGGGAG 1087
| |||||| ||||||| ||| |||||||||| ||||||||||| |||||||||| ||||
Sbjct 1070 TAGGTAAGGAAATGATCAAACATTGTGGAGGGCTACCATTGGCAATCAAAGTGTTAGGAG 1129
Query 1088 GGTTGTTAGCTGCAAAATACACTTTTCATGATTGGAAACGATTATCTGAGAATATTGGAT 1147
| |||||||||||||| ||||| | |||||||||||| |||||||| |||||||||| |
Sbjct 1130 GTTTGTTAGCTGCAAAGTACACACTACATGATTGGAAAAGATTATCTAAGAATATTGGGT 1189
Query 1148 GTCATAT-C-GTG-GGAAGAACCGATTTCAGTGACGGTAACAACAGTTCAGTT-TACCAT 1203
|||| | | | | |||||||| |||| | || || ||||||| |||| || || ||
Sbjct 1190 CTCATCTCCTGGGAGGAAGAACTAATTTTAATGGCGACAACAACAATTCA-TTCAACTAT 1248
Query 1204 GTATTGTCTCTGAGCTTTGAAGAGTTGCCTAGTTATTTGAAGCATTGCTTCCTCTACTTG 1263
|||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||| ||
Sbjct 1249 GTATTGTCTCTGAGCTTTGACGAGTTGCCTAGTTATTTGAAACATTGTTTCCTCTACCTG 1308
Query 1264 GCCCATTTTCCAGAAGATCATAACATAAAGGTAGAAAAATTGTCTTATTGTTGGGCTGCT 1323
|||||||||||||||||| ||| |||||| |||| || |||| ||||| ||||||||
Sbjct 1309 GCCCATTTTCCAGAAGATTATATGATAAAGTTAGAGAACTTGTATTATTACTGGGCTGCA 1368
Query 1324 GAAGGAA-TATTAGAACCTCGACATTACCATGGACAGACTATTCGAGATGTTGGAGAAAG 1382
||| ||| |||| |||||| | |||||| ||||| |||| |||||||||||||||| | |
Sbjct 1369 GAA-GAAGTATTCGAACCTAGGCATTACGATGGAGAGACCATTCGAGATGTTGGAG-ATG 1426
Query 1383 -CTACATAGAGGAGTTAGTGAGGAGAAATATGGT--TATTGCCGAAAGAGATGTTACGAC 1439
|||| |||||||||| ||||||||||||||||| || | | |||||||| | ||||||
Sbjct 1427 TCTACGTAGAGGAGTTGGTGAGGAGAAATATGGTCGTA-T-CTGAAAGAGAAGCTACGAC 1484
Query 1440 TTTGAGATTTGAAGCTTGTCATTTGCATGACATGATGAGAGAAGTTTGTTTGTTAAAAGC 1499
||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||
Sbjct 1485 TTTGAGATTTGAAACTTGTCATTTGCATGACATGATGAGAGAAATTTGTTTGTTGAAAGC 1544
Query 1500 CAAAGAAGAGAACTTCGTTCAAATCGCAAGTATCCTCCCTCCAACCGCAAACTCG-CAAT 1558
|||||||||||| ||| | ||||| | |||| | |||||||||||||||| | ||||
Sbjct 1545 CAAAGAAGAGAATTTCCTACAAATTACTAGTAGCGGCCCTCCAACCGCAAAC-CATCAAT 1603
Query 1559 ATCCTGGT-ACATCTCGCAGATTTGTCTCACAAAATCCTACTACATTACATGTT-AGTAG 1616
| ||| | | ||||||||||||||||||||| ||||||||||||||||||||| || ||
Sbjct 1604 TTACTG-TCAAATCTCGCAGATTTGTCTCACACAATCCTACTACATTACATGTTGAG-AG 1661
Query 1617 AGATATAAATAATCCAAAACTTCAATCTCTCCTTATTGTATG-GGAGAACAGAAGA-AAG 1674
||||||||| ||||||||||||| ||||||| | |||| | || ||| | | | |||
Sbjct 1662 AGATATAAACAATCCAAAACTTCGATCTCTCATGGTTGT-TCAGGTGAATA-A-GTCAAG 1718
Query 1675 AGTTGGAAGCTATTAGGTTCAAGCTT-TATAAGGTTAGAACTACTGAGGGTATTAGATCT 1733
| | ||||||| | ||||||||| || || |||| ||||||| ||||||| ||||||||
Sbjct 1719 A-T-GGAAGCTGTCAGGTTCAAG-TTATAGAAGGGTAGAACTTTTGAGGGTGTTAGATCT 1775
Query 1734 CTA-TAAAGCCAAGTTTGAAGGGAGAAATTTACCTTC-TGGCATTGGAAAGCTCATCCAC 1791
| | | |||||||||| |||| || |||| | || | ||||||||| |||||||||||
Sbjct 1776 C-AGTGGAGCCAAGTTTAAAGGAAGGAATTCAGCT-CATGGCATTGGGAAGCTCATCCAT 1833
Query 1792 TTGAGATACTTGAA-CTTAGATT-TGGCTCGTG-TATCTCGTCTACCTTCTTCTCTAGGA 1848
|| |||||||| || |||| | || || | | |||||| | ||||| |||||||||||
Sbjct 1834 TTAAGATACTT-AAGCTTAAAACATG-CT-GAGGTATCTCATATACCTCCTTCTCTAGGA 1890
Query 1849 AACCT-AAGGTTGCTGATCTATCTAGACATAAATGTATGCA--CGAAATCTCTAT-TCGT 1904
|| || ||| |||||||| ||||| || || || | | || | | || ||| | ||
Sbjct 1891 AATCTGAAG-TTGCTGATTTATCT-GA-ATTTATCTGTACATACTAGGCCTATATGT-GT 1946
Query 1905 GCCCAAT-TGCTTGATGGGGATGC-ATGAATTAAGATACCTTAG-ACTACCATTTAATAC 1961
|||||| | ||||| |||||||| | ||||| ||||||||| | | |||||| | ||
Sbjct 1947 ACCCAATGT-CTTGAAGGGGATGCCA-GAATTGAGATACCTT-GCATTACCATGTGTTAT 2003
Query 1962 GTCGAAGGA-GATA-AAGTTGGGACTGTGTAATCTCGTAAACTTGGAGACCTTAGAGAA- 2018
| || |||| | | || | | | || ||||||| ||||||||||||||| | || ||
Sbjct 2004 G-CGGAGGAAGCCACAACTAGA-ATTGAGTAATCTAGTAAACTTGGAGACCCT-GAAAAA 2060
Query 2019 TTTCTCAACAGAGAATAGCAGCTTAGAGGATCTTCGTGGTATGGTAAGTTTGAGGACTCT 2078
|||||||||| ||||||||||||| |||||||||||||||||||| || |||||| |||
Sbjct 2061 TTTCTCAACAAAGAATAGCAGCTTGGAGGATCTTCGTGGTATGGTCAGGCTGAGGAGTCT 2120
Query 2079 CACCATTGGTTTATTTAAGCACATTAGTAAAGAGACTCTGTTTGCATCAATACTTGGGA- 2137
|| ||| | ||| | || | | |||| || || || | |||||||||| ||| |
Sbjct 2121 CATCATCAGATTAACTGAGGAGACGAGTATGGAAACACTATCTGCATCAATAGGTGG-AC 2179
Query 2138 TG-AGGCACCTGGAAAATCTTAGCATAAGGACACCAGACGGGTCTTCAAAGTTTAAAAGG 2196
|| | | |||||||||||| | ||| ||| | | | | | | || | ||
Sbjct 2180 TGCAAT-ATCTGGAAAATCTT-G-ATATGGAGGC-A-A----T-TG-A---TTGGA--GG 2223
Query 2197 ATAATGGAAGATGGAATCGTATTGGATGCCATTCATCTAAAACAAT-TGAATTTGAGGTT 2255
|||| ||||| ||| || |||||| | |||| ||||| || || ||| |||
Sbjct 2224 ATAAAAGAAGA---AATAGTTTTGGATTTCGCTCATGTAAAA-AAGCTGCGTTTT-GGT- 2277
Query 2256 AT-AT-ATGCCAA-AGTTACCTGATGAACAACACTTCCCTTCTCACCTTACAAGCATATC 2312
| || ||||||| | || ||| | ||| ||||||||||||||| | ||| | | ||||
Sbjct 2278 ACGATTATGCCAAGACTT-CCTAAAGAAGAACACTTCCCTTCTCGC-TTA-ATG-ATAT- 2332
Query 2313 TCTAGATGG--T--TGTTGTTTGGTGGAGGATCCGTTACCGATTCTAGAGAAATTACTTG 2368
| || ||| | |||| ||||| ||||||||| | |||||||| |||||||| |||
Sbjct 2333 TGGAGCTGGGATCATGTTATTTGGAGGAGGATCCAATGCCGATTCTTGAGAAATTGCTTC 2392
Query 2369 AGTTGAAAGAGGTTCGTTTAGACTTT-CGAGCTTTCTGTGGGAAGAGAA-TGGTTAGCTC 2426
| || |||||||||||||||| || | ||||||| ||| ||| ||| ||||| ||||
Sbjct 2393 ATTTAAAAGAGGTTCGTTTAGGGATTGCT-GCTTTCTATGG-AAGCGAAATGGTTTGCTC 2450
Query 2427 GGACGGTGGGTTTCCTCAATTGCACAGGCT--ATATATATGGGGATTAGCTGAGTGGGAA 2484
|| ||||||||||||||| ||| | | ||| ||||| || | | || | | ||||||
Sbjct 2451 GGGCGGTGGGTTTCCTCAGTTGGAGAAGCTCGATATAAATAG--ACTATATAACTGGGAA 2508
Query 2485 GAGTGGATAGTAGAAGAAGGCTCCATGCCACGTCTTCATACTCTGACTAT-A-TGGAATT 2542
||||||||||||||||||||||||||||| | |||||||||||| |||| | | || |
Sbjct 2509 GAGTGGATAGTAGAAGAAGGCTCCATGCCCCTTCTTCATACTCTTTCTATTAATAGA-T- 2566
Query 2543 GTCAAAAATTAAA-GCAGCTTCC 2564
||||||||||||| | |||||||
Sbjct 2567 GTCAAAAATTAAAAG-AGCTTCC 2588
> Ahg907577 jgi|Araly1|907577|Al_scaffold_0002_658
Length=2835
Score = 1005 bits (544), Expect = 0.0
Identities = 1419/1824 (78%), Gaps = 129/1824 (7%)
Strand=Plus/Plus
Query 914 TCAACTTTAAACCAGAATGCCTAACTATTCTAGAGAGTTGGATACTT-TTCCAAAGAATT 972
||||||||||| || ||||||||| || | ||||||||||| |||| || ||| |||
Sbjct 1046 TCAACTTTAAATCACAATGCCTAAGTACTGAAGAGAGTTGGACACTTCTT-CAACTAATA 1104
Query 973 GCAATGCCAAGGGTAGATGAATCAGAATTCAAGGTTGATAAGGAAATGGAA-ATGATGGG 1031
||| | |||| | ||||| ||| ||||| | ||||||| ||||||||||| | ||||||
Sbjct 1105 GCATTTCCAAAGAAAGATGCATCCGAATTTATGGTTGATGAGGAAATGGAAGA-GATGGG 1163
Query 1032 TAAGCAAATGATTAAATATTGTGGAGGACTACCATTGGCCGTCAAAGTGTTGGGAGGGTT 1091
|||| ||||||| ||| ||||||| || |||| ||||| |||||||||| ||||| ||
Sbjct 1164 TAAGGAAATGATAAAACATTGTGGGGGGTTACCTTTGGCTATCAAAGTGTTAGGAGGTTT 1223
Query 1092 GTTAGCTGCAAAATACACTTTTCATGATTGGAAACGATTATCTGAGAATATTGGATGTCA 1151
|||||||||||||| || |||||||||||||| || ||| | || ||||||||| |
Sbjct 1224 TTTAGCTGCAAAATATACAATTCATGATTGGAAAAGAGTATTTAAGGATATTGGATCTGG 1283
Query 1152 TATCGTGGGAAGAACCGATTTCAGTGACGGTAACAACAGTTCAG-TTTACCATGTATTGT 1210
|| | ||||||||||| |||| | ||||| |||||||||||| | | |||||||||||||
Sbjct 1284 TAGCATGGGAAGAACCAATTTAAATGACGATAACAACAGTTC-GATATACCATGTATTGT 1342
Query 1211 CTCTGAGCTTTGAAGAGTTGCCTAGTTATTTGAAGCATTGCTTCCTCTACTTGGCCCATT 1270
|| ||||||||||||||||||||||||||||||| ||||| ||||||||| | ||| |||
Sbjct 1343 CTATGAGCTTTGAAGAGTTGCCTAGTTATTTGAAACATTGTTTCCTCTACCTAGCCTATT 1402
Query 1271 TTCCAGAAGATCAT-AACATAAAGGTAGAAAAATT-GTCTTATTGTTGGGCTGCTGAAGG 1328
|||| |||||| || || ||| | || | || || ||| |||| ||||||||| |||||
Sbjct 1403 TTCCCGAAGATGATGAA-ATAGATGT-GTCAACTTTGTCATATTATTGGGCTGCAGAAGG 1460
Query 1329 AATATT-AGAACCTCG-ACATTACCATGGACAGACTATTCGAGATGTTGGAGAAAGCTAC 1386
|||| | | ||||| | | || | ||||| |||| ||||||||||||||||| ||||||
Sbjct 1461 AATACTCA-AACCTAGGAAAT-ATGATGGAGAGACCATTCGAGATGTTGGAGACAGCTAC 1518
Query 1387 ATAGAGGAGTTAGTGAGGAGAAATATGGTTATTGCCGAAAGAGAT-GTTACGACTTTGAG 1445
||||| ||||| |||||||| |||||||||||| | ||||||||| || | ||||| |||
Sbjct 1519 ATAGACGAGTTGGTGAGGAGGAATATGGTTATTTCTGAAAGAGATAGT-AGGACTTCGAG 1577
Query 1446 ATTTGAAGCTTGTCATTTGCATGACA-TGATGAGAGAAGTTTGTTTGTTAAAAGCCAAAG 1504
||||||| ||||| | |||||||||| | ||||||||| | |||||||||||||||||||
Sbjct 1578 ATTTGAAACTTGTAAATTGCATGACACT-ATGAGAGAACTCTGTTTGTTAAAAGCCAAAG 1636
Query 1505 AAGAGAACTTCGTTCAAATCGCAAGTATCCTC-CCTCCAACCGCAAACTCGCAATATCCT 1563
| ||||||||| | ||||| || ||| || | || || | || | |||| |||| ||||
Sbjct 1637 AGGAGAACTTCCTACAAATTGCCGGTACCCGCTCC-CCGATCGTAGACTCTCAATCTCCT 1695
Query 1564 GGTACATCTCGCAGATTTGTCT-CACAAAATCCTACTA-CATTACATGTT-AGTAGAGAT 1620
||| |||||| || |||| | | ||| |||||||| | ||||||||| || |||||
Sbjct 1696 TGTAGATCTCGTAGGCTTGTGTGC-CAATCTCCTACTAAC-TTACATGTTGAG-AGAGAC 1752
Query 1621 ATAAATAATCCAAAACTTCAATCTCTCCTTATTGTATGGGAGAAC-A-GAAGAAAGAGTT 1678
||||||||| ||||||| ||||||||||||||| | ||| | | | ||||| ||
Sbjct 1753 ATAAATAATTGTAAACTTCGATCTCTCCTTATTGTCTTGGATTTCTATGGTGAAAG--TT 1810
Query 1679 GGAAGCTATTAGGTTCAAGCTTTATA-AGGTTAGAACTACTGAGGGTATTAGATCTCTAT 1737
||| ||||| |||||||||||||| | || |||||||| || ||||| ||||||||||||
Sbjct 1811 GGATGCTATCAGGTTCAAGCTTTA-AGAGATTAGAACTTCTCAGGGTGTTAGATCTCTAT 1869
Query 1738 AAAGCCAAGTTTGAAGG-GAGAAATTTACCTTCTGG-CATTGGAAAGCTCATCCACTTGA 1795
||||| ||||| |||| | ||| || ||| || ||||||||||||||||||||| |
Sbjct 1870 AAAGCGGAGTTTCAAGGAGGGAAGTTG-CCTAA-GGACATTGGAAAGCTCATCCACTTAA 1927
Query 1796 GATACTTGAA-CTTA-GATTTGGCTC-GTGTATCTCGTCTACCTTCTTCTCTAGGAAACC 1852
|||||| || |||| || |||| | ||||||| ||||||||||||||||||| |||
Sbjct 1928 AATACTT-AAGCTTAAGAGA-GGCTAAG-GTATCTCATCTACCTTCTTCTCTAGGAGACC 1984
Query 1853 TAAGGTTGCTGATCTATCT-AGACATAAATGTAT-----G-CAC-G--AA-ATC---TCT 1898
||| |||||||||||||| | | |||||||||| | || | || || |||
Sbjct 1985 TAATTTTGCTGATCTATCTTA-ATATAAATGTATATATTGGCATTGGCAATATGGAATCT 2043
Query 1899 AT--TCGTGCCCAATTGCTT-GATGGGGATGCATGAATTAAGATACCTTAG-ACTACCA- 1953
|| | ||||| ||| | || |||||||||||| ||||||||||||||| | | |||||
Sbjct 2044 ATAATTGTGCCAAAT-GTTTTGATGGGGATGCAAGAATTAAGATACCTT-GCATTACCAA 2101
Query 1954 -TT-TAAT-ACGTCGAAGGAGATAAAGTTGGGACTGTGTAATCTCGTAAACTTGGAGACC 2010
|| || | | || ||||| | ||||||| | || |||| || |||||||||||||||
Sbjct 2102 CTTGTA-TGA-GT--AAGGACACGAAGTTGGAATTGAGTAAGCTAGTAAACTTGGAGACC 2157
Query 2011 TTAGA-GAATTTCTCAACAGAGAATAGCAGCTTAGAGGATCTTCGTGGTATGGTAAGTTT 2069
|| || ||||| | |||||||||| | || | |||||||||||||||||||||| || |
Sbjct 2158 TTGGAAGAATT-CACAACAGAGAACATCAACATAGAGGATCTTCGTGGTATGGTCAGGCT 2216
Query 2070 GAGGACTCTCACCATTGG-TTTATTTAA-GCACATTAGTAAAGAGACTCTGTTTGCATCA 2127
|||||||| || | |||| || | ||| || | || ||||| | |||||||
Sbjct 2217 AAGGACTCTTGTGAT-GACTTTAACTAGTG-ACACTACTGTGGAAACTCTATATGCATCA 2274
Query 2128 ATACTTGGGA-TGAGGCACCTGGAAAATCTTAGCATAAGGACACCAGACGGGTCTTCAAA 2186
||| ||| | | || ||||||||||||||| | | || | | || || ||
Sbjct 2275 ATAGGTGG-ACTTAGACACCTGGAAAATCTT-G-A---GGT-AGCTGA----TCA-CAG- 2321
Query 2187 GTTTAAAAGGATAATGGAAGATGGAATCGTATTGGATGCCATTCATCTAAAACAA-TTGA 2245
|||| | || | | ||| | ||| | ||||||||| | ||||||| ||| || ||||
Sbjct 2322 GTTTGACAGCA-A--GGA-G--GGACTTGTATTGGATTTCGTTCATCTCAAA-AAGTTGA 2374
Query 2246 ATTTGAGGT-TATATATGCCAAAG--TTACCT-GA-TGAACAACACTTCCCTTCTCACCT 2300
|||| | | | ||||||| || | || ||| || | | |||||| |||||||| ||||
Sbjct 2375 GTTTGCG-TATGTATATGC-AAGGGCTT-CCTAGAAT-A-CAACACCTCCCTTCTAACCT 2429
Query 2301 TACAAGCATATCTCTAGATGGTTGTTGTTTGGTGGAGGATCCGTTACCGATTCTAGAGAA 2360
||||| |||||||||||| |||||| ||||||| ||||||||| | ||||||||||||||
Sbjct 2430 TACAACCATATCTCTAGACGGTTGTGGTTTGGTAGAGGATCCGATGCCGATTCTAGAGAA 2489
Query 2361 ATTACTTGAGTTGAAA-GAGGTTCGTTTAGACTT-TCGAGCTTTCTGTGGGAAGAGAATG 2418
| ||| | || ||| ||||| ||| | || | | |||||||||||| |||||||
Sbjct 2490 GCTGCTTCACTT-AAATGAGGTAAAATTA-ATTTATAAATCTTTCTGTGGGAGGAGAATG 2547
Query 2419 GTTAGCTC-GGACGGTGGGTTTCCTCAATTGCACAGGCTATATAT-ATG-GGGATTAGCT 2475
||| |||| || ||||| ||||||| ||| |||| ||| || || ||| ||| ||||
Sbjct 2548 GTTTGCTCAGGG-GGTGGATTTCCTCGATTACACAAGCT-TAGATTATGTGGG-TTAGAA 2604
Query 2476 GAG-TGGGAAGAGTGGATAGTAGAAGAAGGCTCC-ATGCCACGTC-TTCATACTCTGACT 2532
|| | |||||||||||||||||||||||| | || || | | |||||||| || ||
Sbjct 2605 -AGGTTGGAAGAGTGGATAGTAGAAGAAGG-TAGTATCCC-CTTTATTCATACTGTGTCT 2661
Query 2533 ATATGGAATTGTCAAAAATTAAAGCAGCTTCCTGATG-GTTTGCGATTCATCTA-TTCTA 2590
|| ||| ||||||||| ||||||||| |||| | || | | | ||||||| | ||||
Sbjct 2662 ATTTGGGGTTGTCAAAAGTTAAAGCAGGTTCCGGTTGAGCTA-CTATTCATC-ACTTCTT 2719
Query 2591 TAAAAGATTTGGATATGGACAAGAAATGGAAGGAAATATTGTCAGAAGGAGGAGAAGAAT 2650
|||| || || ||||||| |||| |||| |||| | ||| | ||||| || ||||| |
Sbjct 2720 TAAATCATCTGAATATGGATAAGATATGGGAGGAGAGATTTTTGGAAGGTGGTGAAGATT 2779
Query 2651 ATTACAAAGTCCAACACATTCCTT 2674
| ||||||||| ||||||||||
Sbjct 2780 ACTACAAAGTCTTGCACATTCCTT 2803
> Ahg914885 jgi|Araly1|914885|Al_scaffold_0001_5139
Length=2757
Score = 549 bits (297), Expect = 4e-155
Identities = 609/756 (81%), Gaps = 36/756 (5%)
Strand=Plus/Plus
Query 909 ATATGTCAACTTTAAACCAGAATGCCTAACTATTCTAGAGAGTTGGATACTTTTCCA-AA 967
|||| |||||||||||||| |||||||||| || ||| ||||||| |||||| || ||
Sbjct 936 ATATATCAACTTTAAACCACAATGCCTAACCGTTGAAGAAAGTTGGAAACTTTTTCAGAA 995
Query 968 GAATTGCAATGCCAAGGGTAGA-TGAATCAGAATTC-AAGGTTGATAAGGAAATGGAA-A 1024
||| ||| | || || ||| | | || ||| || | ||||||||||||||||||| |
Sbjct 996 -AATAGCATTTCCTCGGAAAGATTTATTC-GAA-TCTATGGTTGATAAGGAAATGGAAGA 1052
Query 1025 TGATGGGTAAGCAAATGATTAAATATTGTGGAGGACTACCATTGGCCGTCAAAGTGTTGG 1084
|||||||||||||||||| || ||||||| ||| | || ||||| |||||||| || |
Sbjct 1053 -GATGGGTAAGCAAATGATCAACCATTGTGGGGGATTGCCTTTGGCAGTCAAAGTATTAG 1111
Query 1085 GAGGGTTGTTAGCTGCAAAATACACTTTTCATGATTGGAAACGATTATCTGAGAATATTG 1144
|||| |||||| || |||||||||| | ||||| |||||| |||||||| |||| |||
Sbjct 1112 GAGGTTTGTTATCTACAAAATACACACTGCATGACTGGAAAAGATTATCTAAGAACATTA 1171
Query 1145 GATGTCATATCGTGGGAAGAACCGATTTCAGTGACGGTAACAACAGTTCAGTTTACCATG 1204
|| |||||| ||||||| ||||||||||| |||| ||| ||||||| |||||| |||
Sbjct 1172 CATCTCATATAGTGGGAAAAACCGATTTCAATGACAACAACGACAGTTCGGTTTACTATG 1231
Query 1205 TATTGTCTCTGAGCTTTGAAGAG-TTGCCTAGT-TATTTGAAGCATTGCTTCCTCTACTT 1262
|||||||||| |||||||||||| || |||| | |||||||||||||||||||||||| |
Sbjct 1232 TATTGTCTCTCAGCTTTGAAGAGCTT-CCTA-TATATTTGAAGCATTGCTTCCTCTACCT 1289
Query 1263 GGCCCATTTTCCAGAAGATCATAAC-ATAAAGGTAGAAAAATTGTCTTATTGTTGGGCTG 1321
|| ||||| ||||||||| || | ||||| ||||| |||||||| |||| ||||||||
Sbjct 1290 AGCTCATTTCCCAGAAGATTAT-CCGATAAATGTAGAGAAATTGTCGTATTATTGGGCTG 1348
Query 1322 CTGAAGGAATATTAGAACCTCGACATTACCATGGA-CAGACTATTCGAGATGTTGGAGAA 1380
| ||||||||| | |||| | |||| | ||| | ||| ||| ||||||||| |||
Sbjct 1349 CAGAAGGAATACCAAAACCAAGGTATTATGACGGAGC-GACCATTAGAGATGTTGCAGAT 1407
Query 1381 AGCTACATAGAGGAGTTAGTGAGGAGAAATATGGTTATTGCCGAAAGAGATGTTACGACT 1440
|||||||||||||||| |||| |||||| | |||||||| |||||||| ||| ||||
Sbjct 1408 GGCTACATAGAGGAGTTGGTGACGAGAAACGTTGTTATTGCGGAAAGAGACATTAGGACT 1467
Query 1441 TTGAGATTTG-AAGC-TTGTCATTTGCATGACATGATGAGAGAAGTTTGTTTGT-TAAAA 1497
|||||||||| || | || ||| |||||||||||||||||||||||||||||| ||||
Sbjct 1468 TTGAGATTTGTAA-CGTT-TCACTTGCATGACATGATGAGAGAAGTTTGTTTGGCTAAA- 1524
Query 1498 GCCAAAGAAGAGAACTTCGTT-CAAAT--C-G-CAAGTATCCTCCCTCCAAC-CGCAAAC 1551
|||| ||||||||||||| || ||| | | | | | || | |||| | | |||| |
Sbjct 1525 GCCAGAGAAGAGAACTTC-TTACAACTTTCTGTCGA-TAGC-TCCC-CGATGGCGCA--C 1578
Query 1552 TCGCAATATCC-TGGTACATCTCGCAGATTTGTCTCACAAAATCCTACTACATTACATGT 1610
|| |||| ||| || || |||||||||| |||||| || |||||||| ||||||| |
Sbjct 1579 TCTCAATCTCCCTG-TAGATCTCGCAGACTTGTCTTTCATGGTCCTACTAAATTACATAT 1637
Query 1611 TAGTAGAGATATAAATAATCCAAAACTTCAATCTCT 1646
|| ||||||||||| ||||||||||||| ||||||
Sbjct 1638 TACAAGAGATATAAAAAATCCAAAACTTCGATCTCT 1673
Score = 418 bits (226), Expect = 1e-115
Identities = 794/1057 (75%), Gaps = 84/1057 (8%)
Strand=Plus/Plus
Query 1670 GAAAGA-GTTGGAAGCTATTAGGTTCAAGCTTTATAAGGTTAGAACTACTGAGGGTATTA 1728
|||| | |||| | ||||| | ||| |||||||| ||||||| |||| |||||| | |||
Sbjct 1720 GAAACACGTTGTATGCTATCAAGTTTAAGCTTTACAAGGTTACAACTGCTGAGGCTGTTA 1779
Query 1729 GATCTCTATAAAGCCAAGTTTGAAGGGA-GAAATTTACCTTCTGGCATTGGAAAGCTCAT 1787
||||||| |||| ||||||||||| ||| |||| ||||| || ||||||||||||||||
Sbjct 1780 GATCTCTCTAAATCCAAGTTTGAA-GGAGGAAAGTTACCATCAAGCATTGGAAAGCTCAT 1838
Query 1788 CCACTTGAGATACTTGAACTTAGATTTGGCTCGTG-TATCTCGTCTACCTTCTTCTCTAG 1846
||||||||||||||||| ||| || || || |||||| |||||||| |||||||
Sbjct 1839 CCACTTGAGATACTTGAGCTTGGAAAACTCTA-TGGTATCTCATCTACCTTATTCTCTAC 1897
Query 1847 GAAACCTAAGGTTGCTGATCTATCTAGACATAAATGTATGCACGAAAT-CTCTA-T-T-C 1902
|||| |||| ||||||||||||| || | || ||||| | | || || || | | |
Sbjct 1898 GAAATCTAAAGTTGCTGATCTATTTAAATTTAGATGTAAA-ATGGGATTCTGTAATCTAC 1956
Query 1903 GTGCCCAATTGCTTGATGGGGATGC-ATGAATTAAGATACCT-TAGACTACCATTTAATA 1960
||||| ||| ||| |||||||||| | ||||| || || || | | |||||| |
Sbjct 1957 ATGCCCGATTTCTTCATGGGGATGCGA-GAATTGAGGTATCTCTC-ATTACCATGGGCT- 2013
Query 1961 CGT-CGAAGGAGATAAAGTTGGGACT-GTGTAATCTCGTAAACTTGGAGACCTTAGA-GA 2017
| | | ||| ||| |||||||| | | | ||||||| ||||||||||||||||| || ||
Sbjct 2014 CTTTCTAAGAAGACAAAGTTGG-ATTTGAGTAATCTTGTAAACTTGGAGACCTT-GAAGA 2071
Query 2018 ATTTCTCAACAGAG-AATAGCAGCTTAGAGGATCTTCGTGGTATGGT-AAGTTTGAGGAC 2075
| |||| |||| || ||| | || || | |||||| | ||||||| || || || ||
Sbjct 2072 ACTTCTTAACA-AGGAATTGTAGTTTTGGGGATCTCCATGGTATGACCAACTTCAAG-AC 2129
Query 2076 TCTC-ACCAT-TGGTTTATTTAA-GCACATTAGTAAAGAGACTCTGTT-TGCATCAATAC 2131
||| | || | ||| | | | | || ||| ||| ||| | | | ||||| ||
Sbjct 2130 TCTTGAA-ATCTC-TTTCTATCATGGG-ATGAGTGTAGAAACTATATCCT-CATCAGTAG 2185
Query 2132 TTGGGAT-GAGGCACCTGGAAAATCTTAGC-ATAAGGACACCAGACGGGTCTTCAA-AG- 2187
||| || ||| ||||||||||||||| | || | | | || | ||| | || ||
Sbjct 2186 GTGG-ATTGAGAAACCTGGAAAATCTTA-CTATCAT-AGATCACA-GGG-CA--AATAGA 2238
Query 2188 TTTAAAAG-GA-TAATGGAAGATGGAATCGTATTGGAT-GCCATTCATCTAAAACAA-TT 2243
||| | | || || | || | || | || || ||| || |||||||| || ||| ||
Sbjct 2239 TTTGAC-GCGAATATTATAA-AGGGGTTTGTTTTAGATTGC-ATTCATCTCAA-CAAGTT 2294
Query 2244 GAATTTGAGG-TTATATATGCCAAAGTTACCTGATGAACAACACTTCCCTTCTCACCTTA 2302
| |||||| | || |||||||||||| ||||||| | |||||| ||||||||||||||
Sbjct 2295 GGATTTGAAGATT-TATATGCCAAAGCTACCTGAGGTACAACATTTCCCTTCTCACCT-- 2351
Query 2303 CAAG-C-ATATCTCTAG-ATG-GTTGTTGTTTGGTGGAGGATCCGTTACCGATTCTAGAG 2358
|||| | ||| ||||| | | || ||||||||| ||||||||| | || |||||||||
Sbjct 2352 CAAGACCATAACTCTAACA-GAGT-GTTGTTTGGAGGAGGATCCCATGCCCATTCTAGAG 2409
Query 2359 AAATTACTTGAGTTGAAAGAGGTTCGTTTAGACTTTCGAGCTTTCTGTGGGAAGAGAATG 2418
|| || || ||||||||||||||| |||| | | || | | ||||||||||||||||||
Sbjct 2410 AAGTTGTTTCAGTTGAAAGAGGTTCATTTAAAGTATCAATCGTTCTGTGGGAAGAGAATG 2469
Query 2419 GTTAGCTC-GGACGGTGGGTTTCCTCAATTGCACAGGCTATAT--ATATGGGGATTAGCT 2475
||| |||| || | ||| ||||||||| | |||| | ||| || | | ||||
Sbjct 2470 GTTTGCTCCGG-CAATGGATTTCCTCAACT--ACAGTTTCTATCGATTTTTGAATTAAAG 2526
Query 2476 GAGTGGGAAGAGTGGATAGTAGAAGAAGGCTCCATGCCACGTCTTCATACTCTGACTATA 2535
|| ||||||||||||||||||||||||||||||||||| | |||||||||| |||||||
Sbjct 2527 GAATGGGAAGAGTGGATAGTAGAAGAAGGCTCCATGCCCCTTCTTCATACTTTGACTATT 2586
Query 2536 TGGAATTGTCAAAAATTAAAGCAGCTTCCTGATGGTTTGCGAT-TCATCTA-TTC-TATA 2592
|||| |||| |||||||||| | ||||| ||||| || ||| | ||| | ||| | |
Sbjct 2587 TGGAGTTGTGGAAAATTAAAGGAACTTCCAGATGGGATGAGATAT-ATC-ACTTCCT-TG 2643
Query 2593 AAAGATTTGGATAT-GGACA--A-G-AAA-TG---G-AAGGAAATATTGTCAGAAGGAGG 2642
||||| || |||| ||| | | | ||| || | ||||| | | |||| | ||||||
Sbjct 2644 AAAGAACTGTATATAGGA-ATGATGCAAACTGAATGGAAGGAGAGACTGTCGGTAGGAGG 2702
Query 2643 AGAAGAATATTACAAAGTCCAACACATTCCTTCTGTT 2679
|| ||| | ||||||||| ||||||||||||||||||
Sbjct 2703 AGCAGATTTTTACAAAGTGCAACACATTCCTTCTGTT 2739
> Ahg907496 jgi|Araly1|907496|Al_scaffold_0002_577
Length=1827
Score = 287 bits (155), Expect = 3e-76
Identities = 345/433 (80%), Gaps = 28/433 (6%)
Strand=Plus/Plus
Query 2255 TATATATGCCAAAGTTACCTGATGAACAACACTTCCCTTCTCACCTTACAAGCATATCTC 2314
|||||||||||| |||||||||||| ||| | ||||||||||||||||||| ||||||||
Sbjct 1391 TATATATGCCAAGGTTACCTGATGAGCAATATTTCCCTTCTCACCTTACAACCATATCTC 1450
Query 2315 -TAGATGGTTGTTGTTTGGTGGAGGATCCGTTACCGATTCTAGAGAAATTACTTGAGTTG 2373
| | || ||| |||||||||||||||| | || ||||||||||| | ||| | ||
Sbjct 1451 TTTG-TGAATGTCGTTTGGTGGAGGATCCAATGCCAATTCTAGAGAAGCTGCTTAACTT- 1508
Query 2374 A-AAGAGGTTC-GTTTAGACTT--TCGAGCTTTCTGTGGGAAGAGAATGGTTAGCTCGGA 2429
| | || | || |||| | || || | |||||||||||| |||||||||| ||||||
Sbjct 1509 ATATGATG-TCAGTTT--ATTTAGTCAATCTTTCTGTGGGAGGAGAATGGTTTGCTCGGG 1565
Query 2430 CGGTGGGTTTCCTCAATTGCACAGGCTATAT-ATATGGGGATTAGCTGAGTGGGAAGAGT 2488
|||||||||||||| ||||| | ||| || ||||| ||| ||| |||||||||||||
Sbjct 1566 CGGTGGGTTTCCTCGGTTGCAGAACCTA-ATGATATGTGGAATAGAAGAGTGGGAAGAGT 1624
Query 2489 GGATAGTAGAAGAAGGCTCCATGCCACGTCTTCATACTCTGACTAT-A-TGGAATTGTCA 2546
||||||||||||||||||||||||||| ||||||| | || ||| | | | |||||
Sbjct 1625 GGATAGTAGAAGAAGGCTCCATGCCACTTCTTCATTTTTTGTTTATTAGTTG--TTGTCC 1682
Query 2547 AAAATTAAAGCAGCTTCCTGATGGTTTGCGATTCATCTA-TTC-TATAAAAGATTTGGA- 2603
||| || ||| | |||||||||||| || |||| ||| | ||| | | |||| |||
Sbjct 1683 AAAGTTTAAGGAACTTCCTGATGGTCTGAGATTTATC-ACTTCCT-TGCAAGAGC-GGAA 1739
Query 2604 TATGGACAAGAAATG-GAAGGA-AATATTGTC-AGAAGGAGGAGAAGAATATTACAAAGT 2660
||| |||| || | |||||| || |||||| ||| |||||||||||||| ||||||||
Sbjct 1740 TATTGACAC-AAGTTTGAAGGAGAA-ATTGTCCAGA-GGAGGAGAAGAATACTACAAAGT 1796
Query 2661 CCAACACATTCCT 2673
||| |||||||||
Sbjct 1797 CCAGCACATTCCT 1809
> Ahg475351 jgi|Araly1|475351|fgenesh2_kg.2__481__AT1G59620.1
Length=2655
Score = 246 bits (133), Expect = 5e-64
Identities = 278/347 (80%), Gaps = 14/347 (4%)
Strand=Plus/Plus
Query 2231 ATCTAAAACAAT-TGAATTTGAGGTTATATATGCCAAAGTTACCTGATGAACAACACTTC 2289
|||| |||| || |||| ||||| |||||||||||| |||||||||||||||||| ||
Sbjct 2072 ATCTCAAAC-ATCTGAAGTTGAGAATATATATGCCAAGGTTACCTGATGAACAACAATTT 2130
Query 2290 CCTTCTCACCTTACAAGCATATCTCTAGATG-GTTGTTGTTTGGTGGAGGATCCGTTACC 2348
|||||| |||||| || ||||||||||| || | ||||||||| ||| ||||| | ||
Sbjct 2131 CCTTCTTACCTTAGAAACATATCTCTAGCTGAG-TGTTGTTTGAAGGAAGATCCAATGCC 2189
Query 2349 GATTCTAGAGAA-ATTACTTGAGTTGAAA-GAGGTTC-GTTTAGAC-TTTCGAGCTTTCT 2404
|||||||||||| | | || | || ||| |||| || ||||| | || | |||| |
Sbjct 2190 GATTCTAGAGAAGCTGA-TTCACTT-AAATGAGG-TCAGTTTA-TCGCATCAATCTTTTT 2245
Query 2405 GTGGGAAGAGAATGGTTAGCTCGGACGGTGGGTTTCCTCAATTGCACAGGCTATATATAT 2464
| ||||||||||||||| |||||| ||||||||||||||||||| | ||| || | |
Sbjct 2246 GCGGGAAGAGAATGGTTTGCTCGGGTGGTGGGTTTCCTCAATTGCTGAAGCTCGATTTGT 2305
Query 2465 GGGGATTAGCTGAGTGGGAAGAGTGGATAGTAGAAGAAGGCTCCATGCCACGTCTTCATA 2524
| ||| ||| ||| ||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 2306 GTGGACTAGATGAATGGGAAGAGTGGATAGTAGAAGAAGGCTCCATGCCCCTTCTTCATA 2365
Query 2525 CTCTGACTATATGGAATTG-TCAAAAATTAAAGCAGCTTCCTGATGG 2570
|||||| | | || | || ||||||||| || ||||||||||
Sbjct 2366 AGCTGACTCTCCGCAAC-GATCCTAAATTAAAGGAGTTTCCTGATGG 2411
> Ahg907578 jgi|Araly1|907578|Al_scaffold_0002_659
Length=852
Score = 161 bits (87), Expect = 2e-38
Identities = 249/325 (77%), Gaps = 19/325 (6%)
Strand=Plus/Plus
Query 1182 TAACAACAGTTC-AGTTTACCATGTATTGTCTCTGAGCTTTGAAGAGTTGCCTAGTTATT 1240
|||||||| ||| | || || ||||||| ||| ||||||| |||||||||||||||||||
Sbjct 69 TAACAACAATTCTA-TTGACAATGTATTATCTTTGAGCTTCGAAGAGTTGCCTAGTTATT 127
Query 1241 TGAAGCATTGCTTCCTCTACTTGGCCCATTTTCCAGAAGATCATAACATAAAG--GTAGA 1298
||||||||| || || ||| | || ||||||||||||||| || || | || |||||
Sbjct 128 TGAAGCATTATTTTCTTTACCTCGCTCATTTTCCAGAAGATTATG-CA-ATAGTTGTAGA 185
Query 1299 AAAATTGTCTTATTGTTGGGCTGCTGAAGGAATATTAGAACCTCGAC--ATTACCATGGA 1356
| ||| | |||| |||||||| ||||||||| | | | ||| ||||| |||||
Sbjct 186 GGATTTGGCCTATTACTGGGCTGCAGAAGGAATACCA-AGGC-CGAGGTATTACGATGGA 243
Query 1357 -CAGACTATTCGAGATGTTGGAGAAAGC-TACATAGAGGAGTTAGTGAGGAGAAATATGG 1414
|| || ||| || | || | | || | || ||||| || || |||| |||||| ||||
Sbjct 244 GCA-ACCATTAGACAGGTCGCA-AATGGATATATAGAAGAATTGGTGAAGAGAAACATGG 301
Query 1415 TTATTGCCGAAAGAGATGTTACGA-CTTTGAGATTTGAAGCTTGTCAT-TTGCATGACAT 1472
||||| | ||||||| | || || ||| ||||||||| | ||||| || ||||| |
Sbjct 302 TTATTTCTAAAAGAGACGCTA-GAACTTCAAGATTTGAAACATGTCAGCTT-CATGATGT 359
Query 1473 GATGAGAGAAGTTTGT-TTGTTAAA 1496
|||||||||||||||| || |||||
Sbjct 360 GATGAGAGAAGTTTGTCTTCTTAAA 384
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 101967585865
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5