BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G58520.2
Length=3613
Score E
Sequences producing significant alignments: (Bits) Value
Ahg925155 jgi|Araly1|925155|scaffold_200716.1 2876 0.0
Ahg471124 jgi|Araly1|471124|fgenesh2_kg.1__1078__AT1G10090.1 1528 0.0
Ahg475383 jgi|Araly1|475383|fgenesh2_kg.2__513__AT1G59406.1 1393 0.0
Ahg907559 jgi|Araly1|907559|Al_scaffold_0002_640 1356 0.0
> Ahg925155 jgi|Araly1|925155|scaffold_200716.1
Length=2335
Score = 2876 bits (1557), Expect = 0.0
Identities = 1744/1830 (95%), Gaps = 30/1830 (2%)
Strand=Plus/Plus
Query 1380 GTATAGCACCATAGCTAAAATGAGGCTTGGGCATATTACTGGATGTGCCTCAAAGCCAAG 1439
|||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 515 GTATAGGACCATAGCTAAAATGAGGCTTGGACATATTACTGGATGTGCCTCAAAGCCAAG 574
Query 1440 TCAATTTACCGTTCTTATCCGTGCTATTCCATGGTCTCCTGAGCAATCTTACAGCGACAC 1499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 575 TCAATTTACCGTTCTTATCCGTGCTATTCCATGGTCTCCTGAGCAATCTTACAGCGACAC 634
Query 1500 GCTGAGCAAATTCTTCACAAACTACTACTCGTCCAGCTACGTGTCCCACCAAATGGTCTA 1559
|||||||||||||||||||| ||||| || || ||||| ||||||||||||||||||||
Sbjct 635 ACTGAGCAAATTCTTCACAAATTACTATTCATCAAGCTATGTGTCCCACCAAATGGTCTA 694
Query 1560 CCATAATGGCATCATTCAGAGACTGCTGCGTGATGCGGAGAGGATGTGCCAGACTCTAAA 1619
||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||
Sbjct 695 CCATAATGGTATCATTCAGAGACTGTTGCGTGAGGCGGAGAGGATGTGCCAGACTCTAAA 754
Query 1620 ACACGTTTCTCCTGAAATCAATTGTAAACCGAGTTT-AAGGCCATGCACCTTTTGTGGAG 1678
|||||||||||||||||||||||||||||| ||||| || |||||||| |||||||||||
Sbjct 755 ACACGTTTCTCCTGAAATCAATTGTAAACCAAGTTTGAA-GCCATGCATCTTTTGTGGAG 813
Query 1679 GACCTACAGCCACAAGTTCTTTTCATATCCTATCGAATGAGGCAGACAGTGTGAAAGGAA 1738
||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||
Sbjct 814 GACCTACAGCCACAAATTCTTTTCATATCCTATCTAATGAGGCGGACAGTGTGAAAGGAA 873
Query 1739 TGGAGCTTGGTGAGTTGACTATGACTACGACTACGACAGAGCAAGAACGTTCAGCTGCTT 1798
||||||||||||||||||| | | | |||||||||||||||||||||| |||||||||
Sbjct 874 TGGAGCTTGGTGAGTTGAC--T-A-T--GACTACGACAGAGCAAGAACGTCCAGCTGCTT 927
Query 1799 TTGTGTTTTTTAAGACTCGCTATGATGCTCTTGTTGTTTCGGAGGTTCTACAATCATCAA 1858
|||||||||| || || ||||||||||||||||||||||| |||||||||||||||||||
Sbjct 928 TTGTGTTTTTCAAAACACGCTATGATGCTCTTGTTGTTTCAGAGGTTCTACAATCATCAA 987
Query 1859 ATCCTATGTTATGGGTGACAGACTTAGCCCCAGAACCTCATGATGTGTACTGGAAGAATC 1918
|||||||| ||||||||||||||||||| ||||||||||| |||||||| ||||||||||
Sbjct 988 ATCCTATGCTATGGGTGACAGACTTAGCTCCAGAACCTCACGATGTGTATTGGAAGAATC 1047
Query 1919 TCAACATTCCTTATCGACAACTTTGGATACGGAAAATAGCAACCCTTGTTGGTGCAGTTG 1978
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1048 TCAACATTCCTTATCGACAACTTTGGATACGGAAAATAGCAACCCTTGTTGGTGCAGTTG 1107
Query 1979 CTTTCATGTTTGTGTTTCTTATTCCCGTTACCTTCATTCAAGGGCTGACTCAACTAGTGC 2038
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||
Sbjct 1108 CTTTCATGTTTGTGTTTCTTATTCCCGTGACCTTCATTCAAGGGCTGACTCAACTAGAGC 1167
Query 2039 AGCTGTCTCACGCATTTCCTTTTCTAAGAGGCATCTTGAGCAAGAACTTTATAAACCAGG 2098
|||||||||||||||||||||||||||||||||||||||| ||| | ||||||| |||||
Sbjct 1168 AGCTGTCTCACGCATTTCCTTTTCTAAGAGGCATCTTGAGGAAGCAGTTTATAAGCCAGG 1227
Query 2099 TCATCACAGGGTACTTACCCAGTGTGATCTTGATTCTATTTTTCTATGCCGTTCCACCAT 2158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1228 TCATCACAGGGTACTTACCCAGTGTGATCTTGATTCTATTTTTCTATGCCGTTCCACCAT 1287
Query 2159 TGATGATGTATTTTTCGGCCTTGGAGGGATGTATTTCACGGAGTATAAGGAAGAAGAGTG 2218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1288 TGATGATGTATTTTTCGGCCTTGGAGGGATGTATTTCACGGAGTATAAGGAAGAAGAGTG 1347
Query 2219 CTTGCATCAAAGTCTTATATTTTACCATTTGGAATGTGTTCTTCGTGAATATATTATCAG 2278
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 1348 CTTGCATCAAAGTCTTATATTTTACCATTTGGAATGTGTTCTTCGTGAATATTTTATCGG 1407
Query 2279 GGTCTGTTATCAGGCAACTGAATGTCTTTTCTAGTGTCAGAGACATACCTGCACAACTTG 2338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1408 GGTCTGTTATCAGGCAACTGAATGTCTTTTCTAGTGTCAGAGACATACCTGCACAACTTG 1467
Query 2339 CTAGAGCAGTGCCAACACAGGCTGGCTTCTTCATGACCTATTGTTTCACATCTGGTTGGG 2398
| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1468 CAAGATCAGTGCCAACACAGGCTGGCTTCTTCATGACCTATTGTTTCACATCTGGTTGGG 1527
Query 2399 CCAGTTTGGCTTGTGAAATAATGCAGCCTATGGCTCTTATCTGGAATCTGGTAGCAAAAG 2458
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1528 CGAGTTTGGCTTGTGAAATAATGCAGCCTATGGCTCTTATCTGGAATCTGGTAGCAAAAG 1587
Query 2459 TTGTTACCAAGAACGAGGATGAGTCATATGAAACACTTAGGTTCCCATACCACACCGAAA 2518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1588 TTGTTACCAAGAACGAGGATGAGTCATATGAAACACTTAGGTTCCCATACCACACCGAAA 1647
Query 2519 TTCCTCGGCTGCTTTTGTTTGGGCTCCTGGGTTTCACCAATTCAGTCATAGCACCACTGA 2578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1648 TTCCTCGGCTGCTTTTGTTTGGGCTCCTGGGTTTCACCAATTCAGTCATAGCACCACTGA 1707
Query 2579 TACTGCCGTTTTTGCTGATATACTTTTTCCTTGCATATCTCATATACAAAAATCAAATAC 2638
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1708 TACTGCCGTTTTTGCTGATATACTTTTTCCTTGCATATCTCATATACAAAAATCAGATAC 1767
Query 2639 TCAACGTGTATATTACGAAGTACGAAAGCGGTGGACAATACTGGCCTATTTTCCACAACA 2698
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1768 TCAACGTGTATATTACAAAGTACGAAAGCGGTGGACAATACTGGCCTATTTTCCACAACA 1827
Query 2699 CAACAATCTTTTCACTGATCTTGACACAGATTATAGCTTTGGGGTTT-TTCGGATTAAAG 2757
||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct 1828 CAACAATCTTTTCACTGATCTTGACACAGATTATAGCTTTGGG-TTTCTTCGGATTAAAG 1886
Query 2758 CTATCAACAGTTGCTTCGGGTTTCACCATACCGTTAATTCTTCTCACGTTACTTTTTAGT 2817
|||||||| ||||||||||||||||| ||||| || ||||||||||| || |||||||||
Sbjct 1887 CTATCAACGGTTGCTTCGGGTTTCACTATACCATTGATTCTTCTCACTTTGCTTTTTAGT 1946
Query 2818 GAGTATTGTCGGCAGAGGTTTGCGCCCATTTTCAACAAAAATCCTGCCCAGGTTCTCATA 2877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1947 GAGTATTGTCGGCAGAGGTTTGCGCCCATTTTCAACAAAAATCCTGCCCAGGTTCTCATA 2006
Query 2878 GATATGGACAGAGCTGATGAAATATCAGGAAAGATGGAAGAGTTACATAAAAAATTGCAT 2937
||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2007 GATATGGACAGGGCTGATGAAATCTCAGGAAAGATGGAAGAGTTACATAAAAAATTGCAT 2066
Query 2938 AATGTATACTCGCAGATACCATTACACTCTCAGAAATCATCGAGTAAAGCTGAATGTAGT 2997
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||
Sbjct 2067 AATGTATACTCGCAGATACCATTACACTCTGAGAAATCATCGAGTAAAGCTGAATGCAGT 2126
Query 2998 AATCCTTTCAAAAAGCAGGAGTTACCAGATCCTGAAAAATTGAAGCCAGAGGAGGGGGAT 3057
|||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 2127 AATCCTTTCAAAAATCAGGAGTTACCAGATCCTGAAAAATTGAAGCCAGAGGAAGGGGAT 2186
Query 3058 GCGATAGCTAAAGAGTTATGGGGAT-TCCAAGGCAATGAATCTGGTCAAGAACATGACAC 3116
|||||||| |||||||||||||||| || ||||||||||||||||||||||||||||| |
Sbjct 2187 GCGATAGCGAAAGAGTTATGGGGATATC-AAGGCAATGAATCTGGTCAAGAACATGACGC 2245
Query 3117 TAAGTCCTG----AG--C---A--------TCTTTCTCCAAAGAAGATCGAACTTCACAA 3159
||||||||| || | | ||||||||||||| |||||||||||||||
Sbjct 2246 TAAGTCCTGTCCCAGTGCTTCACCAGAGCATCTTTCTCCAAAGCTGATCGAACTTCACAA 2305
Query 3160 ACGGAACTAGACAGATGTTTTT-ACTAGTG 3188
||||||||||||||| ||||| |||||||
Sbjct 2306 ACGGAACTAGACAGACATTTTTTACTAGTG 2335
Score = 669 bits (362), Expect = 0.0
Identities = 396/413 (96%), Gaps = 0/413 (0%)
Strand=Plus/Plus
Query 909 TAGGAAACAGCCAGCCAATTACTGTGTATATTTTGGCCGAAGGCTTGTTTGTGGTGGTGC 968
||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 101 TAGGAAACAACCATCCAATTACTGTGTATATTTTGGCCGAAGGCTTGTTTGTGGTGGGGC 160
Query 969 TAGACGTTATGATCCTTTTTGGTATGAGAGGTTTGTGCCGTCTCCAAGTTGGCTTGTGAA 1028
||||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||
Sbjct 161 TAGACGTTATGATCCGTTTTGGTATGAGAGGTTTGTGCCGTCTCCAAGTTGGCTGGTTAA 220
Query 1029 AGCATGGGAGACTAGTGAAGACGAGTTATTAGCTGCTGCTGGTCTTGATGCTGTCGTCTT 1088
||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct 221 AGCATGGGAAACTAGTGAAGATGAGTTATTAGCTGCTGCTGGTCTTGATGCTGTTGTCTT 280
Query 1089 CCTTAGGATGGTCATTTTCAGCATTCGTATTTTCTTTATAGTTGCTGTTATTTGCATTGC 1148
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 281 CCTTAGGATGGTCCTTTTCAGCATTCGTATTTTCTTTATAGTTGCTGTTATTTGCATTGC 340
Query 1149 CTTTGTGCTGCCTGTTAATTATTATGGGCAACCGATGGTGCATAAGGAAATCCATTTGGA 1208
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 341 CTTTGTACTGCCTGTTAATTATTATGGGCAACCGATGGTGCATAAGGAAATCCATTTGGA 400
Query 1209 GTCATCCGAAGTGTTTACAATTGAAAATCTTAAAGAAGGCTCAAAATGGCTGTGGGTTCA 1268
||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 401 GTCATCCGAAGTGTTCACAATCGAAAATCTTAAAGAAGGCTCCAAATGGCTGTGGGTTCA 460
Query 1269 TTGTCTTGCACTGTACATTATAACCTCAGCGGCATGTCTTCTGCTCTACTTTG 1321
|||||||||||||||||||||||||||||||||||||||||| || || ||||
Sbjct 461 TTGTCTTGCACTGTACATTATAACCTCAGCGGCATGTCTTCTTCTTTATTTTG 513
> Ahg471124 jgi|Araly1|471124|fgenesh2_kg.1__1078__AT1G10090.1
Length=2802
Score = 1528 bits (827), Expect = 0.0
Identities = 1411/1686 (84%), Gaps = 67/1686 (4%)
Strand=Plus/Plus
Query 1389 CATAGCTAAAATGAGGCTTGGGCATATTACTGGATGTGCCTCAAAGCCAAGTCAATTTAC 1448
|||||| |||| |||||||| ||||||||||||| | ||||||||| |||||| |||||
Sbjct 793 CATAGCCAAAAGGAGGCTTGCCCATATTACTGGATCTACCTCAAAGCAAAGTCATTTTAC 852
Query 1449 CGTTCTTATCCGTGCTATTCCAT-GGTCTCCTGAGCAATCTTACAGCGACACGCTGAGCA 1507
|||||||| ||||||||||| | ||||||||| || || |||||||| ||| ||||||
Sbjct 853 TGTTCTTATTCGTGCTATTCC-TCAGTCTCCTGACCAGTCCTACAGCGAGACGGTGAGCA 911
Query 1508 AATTCTTCACAAACTACTACTCG-TCC-AGCTACGTGTCCCACCAAATGGTCTACCATAA 1565
||| ||||||||| ||||| | | || ||||| ||||| |||| ||||||||||| | |
Sbjct 912 AATACTTCACAAATTACTA-T-GCACCAAGCTATGTGTCGCACCTAATGGTCTACCGTGA 969
Query 1566 TGGCATCATTCAGAGACTGCTGCGTGATG-CGGAGAGGATGTGCCAGACTCTAAAACACG 1624
|||| ||||||| |||||| || ||| | ||||||||||||| ||| || ||||||| |
Sbjct 970 TGGCTTCATTCACAGACTGATGAATGA-GACGGAGAGGATGTGTCAGGCTATAAAACATG 1028
Query 1625 TTTCTCCTGAAATCAA-TTGTAAACCGAGTTT-AAGGCCATGCACCTTTTGTGGAGGACC 1682
||||||||| | | || |||||| |||||||| || | |||| || ||||| |||||
Sbjct 1029 TTTCTCCTG-ATTTAAGTTGTAATCCGAGTTTGAA-GTCATGTGCCCTTTGT---GGACC 1083
Query 1683 TACAGCCACAAGTTCTTTTCATATCCTATCGAATGAGGCAGACAGTGTGAAAGGAATGGA 1742
| ||||||||| ||||||||| ||||| ||||| ||| |||||||||| ||||| | |
Sbjct 1084 TGCAGCCACAAATTCTTTTCAAATCCTCTCGAACGAGACAGACAGTGTCAAAGG-A--CA 1140
Query 1743 GCTTGGTGAGTTGACTATGACTACGACTACGACAGAGCAAGAACGTTCAGCTGCTTTTGT 1802
|||||||||||||||| | | ||||||||||||| |||||||| | | |||||||||
Sbjct 1141 GCTTGGTGAGTTGACT-T---T--GACTACGACAGAGGAAGAACGTCCCGTTGCTTTTGT 1194
Query 1803 GTTTTTTAAGACTCGCTATGATGCTCTTGTTGTTTCGGAGGTTCTACAATCATCAAATCC 1862
|||||| |||| ||| |||||||||||||||||||| |||||||| ||| || |||||||
Sbjct 1195 GTTTTTCAAGAGTCGTTATGATGCTCTTGTTGTTTCAGAGGTTCTTCAAACACCAAATCC 1254
Query 1863 TATGTTATGGGTGACAGACTTAGCCCCAGAACCTCATGATGTGT-ACTGGAAGAATCTCA 1921
||||||||||||| ||||||| || ||||| ||||||||||| | |||||| ||||||||
Sbjct 1255 TATGTTATGGGTGGCAGACTTGGCGCCAGAGCCTCATGATGT-TCACTGGAGGAATCTCA 1313
Query 1922 -ACATTCCTTATCGACAACTTTGGATACGGAA-AATAGCAACCCTTGTTGGTGCAGTTGC 1979
| || |||||||| ||||||||||| | ||| |||||||||||||||||||||||||||
Sbjct 1314 GA-ATACCTTATCGGCAACTTTGGATGC-GAAGAATAGCAACCCTTGTTGGTGCAGTTGC 1371
Query 1980 TTTCATGTTTGTGTTTCTTATTCCC-GTTACCTTCATTCAAGGGCTGACTCAACTAGTGC 2038
|||||||||||||||||| ||||| ||| |||| |||||||||||||||| |||
Sbjct 1372 CTTCATGTTTGTGTTTCTT-TTCCCTGTTGCCTTTGTTCAAGGGCTGACTCAGCTA-CAA 1429
Query 2039 A-GCTGTCTCACGCA-TTTCCTTTTCTAAGAGGCATCTTG-AGCAAGAACTTTATAAACC 2095
| ||| || || | | |||||||||||||||| | ||||| | |||| ||||| || |
Sbjct 1430 ACGCTATC-CAAGAATTTTCCTTTTCTAAGAGACCTCTTGCA-CAAGGGGTTTATGAAGC 1487
Query 2096 AGGTCATCACAGGGTACTTACCCAGTGTGATCTTGATTCTATT-TTTCTATGCCGTTCCA 2154
|||||||||||||||||||||| |||||||| ||| ||||||| ||| |||||||||||
Sbjct 1488 AGGTCATCACAGGGTACTTACCAAGTGTGATTTTGGTTCTATTCTTT-TATGCCGTTCCG 1546
Query 2155 CCATTGATGATGTATTTTTCGGCCTTGGAGGGATGTATTTCACGGAGTATAAGGAAGAAG 2214
|||||||||||||| ||||| |||||||||||||| |||| |||||| |||| |||||
Sbjct 1547 CCATTGATGATGTACTTTTCAACCTTGGAGGGATGTGTTTCTCGGAGTCTAAGAAAGAAA 1606
Query 2215 AGTGCTTGCATCAAAGTCTTATATTTTACCATTTGGAATGTGTTCTTCGTGAATATAT-T 2273
||||| || |||||| | ||||| |||||||| ||||||||||||||||| ||||| | |
Sbjct 1607 AGTGCATGTATCAAAATTTTATACTTTACCATCTGGAATGTGTTCTTCGTCAATAT-TCT 1665
Query 2274 ATCAGGGTCTGTTATCAGGCAACTGAATGTCTTTTCTAGTGTCAGAGACATACCTGCACA 2333
|||||| |||||||||||||| ||| ||||| |||||||| || ||||||||||||||
Sbjct 1666 ATCAGGCTCTGTTATCAGGCAGTTGAGCGTCTTGTCTAGTGTGAGGGACATACCTGCACA 1725
Query 2334 ACTTGCTAGAGCAGTGCCAACACAGGCTGGCTTCTTCATGACCTATTGTTTCACATCTGG 2393
|||||| | || ||| ||| |||||| |||||||||||||||||||||||||||||||||
Sbjct 1726 ACTTGCGAAAGTAGTTCCAGCACAGGTTGGCTTCTTCATGACCTATTGTTTCACATCTGG 1785
Query 2394 TTGGGCCAGTTTGGCTTGTGAAATAATGCAGCCT--ATGGCTCTTATCTGGAATCTGGTA 2451
||||||| ||||||| |||||||| ||||| ||| ||| |||||||||||||||| ||
Sbjct 1786 TTGGGCCGGTTTGGCATGTGAAATCATGCAACCTGTATG--TCTTATCTGGAATCTGATA 1843
Query 2452 GCAAAAGTTGTTACCAAGAACGAGGATGAGTCATATGAAACACTTAGGTTCCCATACCAC 2511
||||||||| || ||||||| |||| || |||||||||||||||||||| || |||||
Sbjct 1844 GCAAAAGTTATTGTCAAGAACAAGGAGGACTCATATGAAACACTTAGGTTTCCGTACCAT 1903
Query 2512 ACCGAAATTCCTCGGCTGCTTTTGTTTGGGCTCCTGGGTTTCACCAATTCAGTCATAGCA 2571
|| ||||||||||| || |||||||| |||||||| |||||||| ||||||||||||||
Sbjct 1904 ACAGAAATTCCTCGACTACTTTTGTTCGGGCTCCTAGGTTTCACAAATTCAGTCATAGCG 1963
Query 2572 CCACTGATACTGCCGTTTTTGCTGATATACTTTTTCCTT-GCATATCTCATATACAAAAA 2630
|| || |||||||||||| ||||||| ||||||||| || |||||||| |||||||||||
Sbjct 1964 CCTCTAATACTGCCGTTTCTGCTGATCTACTTTTTC-TTCGCATATCTTATATACAAAAA 2022
Query 2631 TCAAATACTCAACGTGTATATTACGAAGTACGAAAGCGGTGGACAATACTGGCCTATTTT 2690
||| ||| ||||||| |||||||| || || ||||||||||||||||| |||||| ||||
Sbjct 2023 TCAGATAATCAACGTCTATATTACAAAATATGAAAGCGGTGGACAATATTGGCCTGTTTT 2082
Query 2691 CCACAACACAACAATCTTTTCACTGATCTTGACACAGATTATAGCTTTGGGGTTTTTCGG 2750
|||||||| ||||||||||||||||||||| | || |||||||| | || ||||||||
Sbjct 2083 TCACAACACGACAATCTTTTCACTGATCTTGTCGCAAATTATAGCGCTAGGCTTTTTCGG 2142
Query 2751 ATTAAAGCTATCAACAGTTGCTTCGGGTTTCACCATACCGTTAATTCTTC-TCACG-TTA 2808
|||||||||||||| |||||||| ||||||||||| ||||||||| ||| | || ||
Sbjct 2143 TTTAAAGCTATCAACGGTTGCTTCAGGTTTCACCATCCCGTTAATT-TTCCTTACTCTT- 2200
Query 2809 CTTTTTAGTGAGTATTGTCGGCAGAGGTTTGCGCCCATTTTCAACAAAAATCCTGCCCAG 2868
|| |||||||||||||| ||||| || ||||| ||||| ||||| ||| |||| ||| ||
Sbjct 2201 CTATTTAGTGAGTATTGCCGGCAAAGATTTGCACCCATATTCAAGAAATATCCAGCCGAG 2260
Query 2869 GTTCTCATAGATATGGACAGAGCTGATGAAAT-ATCAGGAAAGATGGAAGAGTTACATAA 2927
|||| || | |||||||||||| ||||| || | ||||||||||||||||| |||||||
Sbjct 2261 ATTCTTATCGCTATGGACAGAGCAGATGAGATGA-CAGGAAAGATGGAAGAGATACATAA 2319
Query 2928 AAAATTGCATAA--TGTATACTCGCAGATACCATTACAC-T-CTCAGAAATCATCGAGTA 2983
|| ||| | || || |||||| ||||||||| || | || || |||| ||| |
Sbjct 2320 CAACTTG-A-AAGCTGCATACTCTCAGATACCA--ACGTGTTCTGAGGAATC---GAGCA 2372
Query 2984 AAGCTGAATGT-AGTAATCCTTTCAAAAAGCAGGAGTTACCAGATCCTGAAAAATTGAAG 3042
|||||| | | | | ||||| | | | ||||||||||||||| ||||| | |||||
Sbjct 2373 AAGCTGGTT-TCACTTCTCCTTGCTCAGATCAGGAGTTACCAGATTCTGAACAGTTGAAA 2431
Query 3043 CCAGAG 3048
|| |||
Sbjct 2432 CCTGAG 2437
> Ahg475383 jgi|Araly1|475383|fgenesh2_kg.2__513__AT1G59406.1
Length=1053
Score = 1393 bits (754), Expect = 0.0
Identities = 824/858 (96%), Gaps = 4/858 (0%)
Strand=Plus/Plus
Query 1 ATGAAGCTTCAAATTCTATTGCTTGCTTTGGTTTTAATCGCT-GTTGAAGCGAATGCAGT 59
||||||||||||||||||| ||| |||||||||||||||| | |||||||| ||||||||
Sbjct 4 ATGAAGCTTCAAATTCTATGGCTCGCTTTGGTTTTAATCG-TCGTTGAAGCTAATGCAGT 62
Query 60 CAAGCAAGGGATAAACGCAACGATCCCAGCGCTAATAGTTTTTGGAGATTCAATAATGGA 119
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 63 CAAGCAAGGGATAAACGCAACGATCCCGGCGCTAATAGTTTTTGGAGATTCAATAATGGA 122
Query 120 TACAGGAAATAACAATAATCTTCCGACTCTTCTTAAATGTAACTTTCCTCCATATGGTAA 179
|||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct 123 TACAGGAAATAACAATAATCTTCCCACTCTTCTTAAATGTAACTTCCCTCCATATGGTAA 182
Query 180 AGATTATCCTGGAGGCGACGCCACTGGAAGATTTTCTGATGGAAGAGTTCCTTCTGATCT 239
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 183 AGATTATCCTGGAGGCTTTGCCACTGGAAGATTTTCTGATGGAAGAGTTCCTTCTGATCT 242
Query 240 TATTGCGGAAAAGTTGGGATTGGCTAAGACATTACCAGCATATATGAATTCATATTTGAA 299
|||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct 243 TATTGCCGAAAAGTTGGGATTGTCTAAGACATTACCAGCATATATGAATCCATATTTGAA 302
Query 300 GCCTGAGGATCTTCTTAAAGGTGTAACATTTGCATCTCGAGGAACTGGTTATGATCCATT 359
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||
Sbjct 303 GCCTGAGGATCTTCTTAAAGGTGTAACATTTGCATCTGGAGGAACTGGTTATGATCCTTT 362
Query 360 GACAGCAAAAATTATGTCAGTGATATCGGTATGGGATCAACTCATATATTTCAAAGAATA 419
|||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 363 GACAGCTAAAATTATGTCAGTGATATCGGTGTGGGATCAACTCATATATTTCAAAGAATA 422
Query 420 TATATCAAAGATCAAGAGGCATTTCGGAGAAGAAAAAGCCAAAGATATCTTGGAACATAG 479
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 423 TATATCAAAGATCAAGAGGCATTTCGGAGAAGAAAAAGCCAAAGAAATCTTGGAACATAG 482
Query 480 TTTCTTTCTTGTGGTGTCTAGTAGCAATGACCTTGCTCACACTTATTTAGCTCAAGCTCA 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 483 TTTCTTTCTTGTGGTGTCTAGTAGCAATGACCTTGCTCACACTTATTTAGCTCAAGCTCA 542
Query 540 TAGATATGACCGTACCTCTTATGCCAATTTCTTGGCTGACTCTGCTGTCCATTTCGTGAG 599
||||||||| |||| |||||| ||||||||||||||||| |||||||||||||||||||
Sbjct 543 TAGATATGATCGTATCTCTTACGCCAATTTCTTGGCTGATTCTGCTGTCCATTTCGTGAA 602
Query 600 AGAATTACATAAGCTTGGAGCTCGAAAAATTGGAGTGTTTAGTGCAGTCCCCGTTGGTTG 659
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 603 AGAATTACATAAGCTTGGAGCTCGGAAAATTGGAGTGTTTAGTGCAGTCCCCGTTGGTTG 662
Query 660 TGTTCCA-TTACAAAGAACAGTTTTTGGAGGtttttttACAAGAGGATGTAATGAACCTC 718
|||||| || |||||||||||||||||||| ||||||||||||||||||||| ||||||
Sbjct 663 TGTTCCTCTT-CAAAGAACAGTTTTTGGAGGGTTTTTTACAAGAGGATGTAATCAACCTC 721
Query 719 TAAACAACATGGCAAAACAATTCAACGCAAGACTTTCTCCAGCATTAGATTCTTTAGATA 778
|||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct 722 TAAACAACATGGCAAAACAATTCAACGCAAGACTTTCTCCGGCACTAGATTCTTTAGATA 781
Query 779 AAGAGTTGGATGGTGTTATCCTTTACATTAATGTTTATGATACTCTTTTTGACATGATCC 838
|||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct 782 AAGAGTTGGATGGTGTCATCCTTTACATTAATGTTTATGATACTCTTTTCGACATGATCC 841
Query 839 AACACCCTAAAAAATACG 856
||||||||||||||||||
Sbjct 842 AACACCCTAAAAAATACG 859
> Ahg907559 jgi|Araly1|907559|Al_scaffold_0002_640
Length=1050
Score = 1356 bits (734), Expect = 0.0
Identities = 819/859 (95%), Gaps = 10/859 (1%)
Strand=Plus/Plus
Query 1 ATGAAGCTTCAAATTCTATTG-CTTGCTTTGGTTTTAATCGCTGTTGAAGCGAATGCAGT 59
|||||||||||||||||| || || ||||||||||||||||| ||||||| |||||||
Sbjct 1 ATGAAGCTTCAAATTCTA-TGTCTCGCTTTGGTTTTAATCGCCATTGAAGCTAATGCAGC 59
Query 60 CAAGCAAGGGATAAACGCAACGATCCCAGCGCTAATAGTTTTTGGAGATTCAATAATGGA 119
||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct 60 CAAGCAAGGGATAAACGCAACGATCCCGGCACTAATAGTTTTTGGAGATTCAATAATGGA 119
Query 120 TACAGGAAATAACAATAATCTTC-CGACTCTTCTTAAATGTAACTTTCCTCCATATGGTA 178
||||||||||||||||||||||| | |||||||||||||||||||| |||||||||||||
Sbjct 120 TACAGGAAATAACAATAATCTTCAC-ACTCTTCTTAAATGTAACTTCCCTCCATATGGTA 178
Query 179 AAGATTATCCTGGAGGCGACGCCACTGGAAGATTTTCTGATGGAAGAGTTCCTTCTGATC 238
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 179 AAGATTATCCTGGAGGCTTCGCCACTGGAAGATTTTCTGATGGAAGAGTTCCTTCTGATC 238
Query 239 TTATTGCGGAAAAGTTGGGATTGGCTAAGACATTACCAGCATATATGAATTC-ATATTTG 297
||||||||||||||||||||||||||||||||||||||||||||||||| | | |||||
Sbjct 239 TTATTGCGGAAAAGTTGGGATTGGCTAAGACATTACCAGCATATATGAAC-CGAAATTTG 297
Query 298 AAGCCTGAGGATCTTCTTAAAGGTGTAACATTTGCATCTCGAGGAACTGGTTATGATCCA 357
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 298 AAGCCTGAGGATCTTCTTAAAGGTGTAACATTTGCATCTGGAGGAACTGGTTATGATCCT 357
Query 358 TTGACAGCAAAAATTATGTCAGTGATATCGGTATGGGATCAACTCATATATTTCAAAGAA 417
|||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 358 TTGACAGCTAAAATTATGTCAGTGATATCGGTGTGGGATCAACTCATATATTTCAAAGAA 417
Query 418 TATATATCAAAGATCAAGAGGCA-TTTCGGAGAAGAAAAAGCCAAAGATATCTTGGAACA 476
||||||||||||||||||| ||| ||| |||||||||||||||||||| |||||||||||
Sbjct 418 TATATATCAAAGATCAAGAAGCACTTT-GGAGAAGAAAAAGCCAAAGAAATCTTGGAACA 476
Query 477 TAGTTTCTTTCTTGTGGTGTCTAGTAGCAATGACCTTGCTCACACTTATTTAGCTCAAGC 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 477 TAGTTTCTTTCTTGTGGTGTCTAGTAGCAATGACCTTGCTCACACTTATTTAGCTCAAGC 536
Query 537 TCATAGATATGACCGTACCTCTTATGCCAATTTCTTGGCTGACTCTGCTGTCCATTTCGT 596
|||| ||||||| ||||| ||||| ||||||||| |||||||||||||||||||||||||
Sbjct 537 TCATCGATATGATCGTACTTCTTACGCCAATTTCCTGGCTGACTCTGCTGTCCATTTCGT 596
Query 597 GAGAGAATTACATAAGCTTGGAGCTCGAAAAATTGGAGTGTTTAGTGCAGTCCCCGTTGG 656
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 597 GAGAGAATTACATAAGCTTGGAGCTCGAAAAATTGGAGTGTTTAGTGCAGTCCCTGTTGG 656
Query 657 TTGTGTTCCATTACAAAGAACAGTTTTTGGAGGtttttttACAAGAGGATGTAATGAACC 716
|||||||||| | ||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct 657 TTGTGTTCCACTCCAAAGAACAGTTTTTGGAGGTTTTTTTACAAGAAGATGTAACCAACC 716
Query 717 TCTAAACAACATGGCAAAACAATTCAACGCAAGACTTTCTCCAGCAT-TAGATTCTTTAG 775
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct 717 TCTAAACAACATGGCAAAACAATTCAACGCAAGACTTTCTCCAGC-TCTAGATTCTTTAG 775
Query 776 ATAAAGAGTTGGATGGTGTTATCCTTTACATTAATGTTTATGATACTCTTTTTGACATGA 835
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 776 ATAAAGAGTTGGATGGTGTTATTCTTTACATTAATGTTTATGATACTCTTTTTGACATGA 835
Query 836 TCCAACACCCTAAAAAATA 854
|||||||||||||||||||
Sbjct 836 TCCAACACCCTAAAAAATA 854
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 136474456778
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5