BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G59790.1
Length=1125
Score E
Sequences producing significant alignments: (Bits) Value
Ahg947963 jgi|Araly1|947963|scaffold_704192.1 1360 0.0
Ahg925097 jgi|Araly1|925097|scaffold_200658.1 876 0.0
Ahg338392 jgi|Araly1|338392|fgenesh1_pg.C_scaffold_2000491 649 0.0
Ahg925090 jgi|Araly1|925090|scaffold_200651.1 621 3e-177
Ahg925091 jgi|Araly1|925091|scaffold_200652.1 566 2e-160
Ahg338401 jgi|Araly1|338401|fgenesh1_pg.C_scaffold_2000500 326 3e-88
Ahg338398 jgi|Araly1|338398|fgenesh1_pg.C_scaffold_2000497 257 1e-67
> Ahg947963 jgi|Araly1|947963|scaffold_704192.1
Length=1148
Score = 1360 bits (736), Expect = 0.0
Identities = 984/1101 (89%), Gaps = 27/1101 (2%)
Strand=Plus/Plus
Query 35 TTAAATTTGAGGAAGGATGGTCCAACATT-CAGAAAGGTATTACC-AAGCTGATAAGGAT 92
||||||||||||||||||||||| | || ||||||||||||||| ||| |||||||||
Sbjct 28 TTAAATTTGAGGAAGGATGGTCC-TCCTTGCAGAAAGGTATTACCGAAG-TGATAAGGA- 84
Query 93 TC-TAGAAGGAGAGCCTGAACCAACATTT-TATTTTAGTGAATGTTTTAAACTTTACACG 150
|| |||||| |||||| |||||| ||||| | | || | || | || |||||||||
Sbjct 85 TCATAGAAGAAGAGCCGGAACCAGCATTTAAACCTCAG-CTAGGTGTCAATCTTTACACG 143
Query 151 ATTATCTACGATATGTGTGTCCAGAGATCC-GATTATTCACAGCAGCTTTATGAAAAGTA 209
| |||||||||||||| ||| | | || ||||| ||||| ||||||||||| |||||
Sbjct 144 ACAATCTACGATATGTGCACCCA-AAAACCAGATTACTCACATCAGCTTTATGAGAAGTA 202
Query 210 TCGTAAAGTAATTGAAGATTATACTATCCAAACGGTGTTGCCGTCTTTAAGGGAGAAGCA 269
|| | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 203 TCTTCAAGTAATTGAAGATTATACTATCCAAACGGTGTTGCCTTCTTTAAGGGAGAAGCA 262
Query 270 TGATGAAGATATGCTAAGAGAGCTTGTTAAGAGGTGGAATAACCATAAAATTATGGTCAA 329
||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||| |
Sbjct 263 TGATGAACATATGCTAATAGAGCTTGTTAAGAGGTGGAATAACCATAAAATTTTGGTTAC 322
Query 330 ATGGTTAAGCAA-GTTCTTCGTTTATATTGACCGTCACTTGGTTCGTCGGAGTAAGATTC 388
|| |||| ||| || ||| |||||| |||||| ||||||||| ||||| | | | |
Sbjct 323 ATTTTTAACCAACATT-TTCCATTATATCGACCGTTACTTGGTTCCTCGGACT-A-A-T- 377
Query 389 CAATTCCATCACTAGATGAAGTTGGATTGACATGCTTTCTTGACCTGGTTTATTGTGAGA 448
||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||
Sbjct 378 --ATTCCATCACTAGATGAAGTTGGATTGACATGCTTCCTTGACCTGGTTTATTCTGAGA 435
Query 449 TGCAGTCCACGGCCA-AAGAAGTTGTAATAGCACTTATTCATAAAGAACGTGAGGGCGAA 507
|||| |||| ||||| || ||| |||| ||||||||||||||||||||||||||||||||
Sbjct 436 TGCAATCCATGGCCACAA-AAGCTGTAGTAGCACTTATTCATAAAGAACGTGAGGGCGAA 494
Query 508 CAGATAGATAGGGCACTAGTGAAGAACGTATTAGATATCTATGTGGAGAATGGGATGGGA 567
|||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct 495 GAGATTGATAGGGCACTAGTGAAGAACGTATTAGATGTCTATGTGGATAATGGGATGGGA 554
Query 568 ACC-TTGGAAAAATATGAAGAGGATTTTGAAAGCTTCATGCTTCAAGATACTGCTTCTTA 626
||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 555 ACCACT-GAAAAATATGAAGAGGATTTTGAAAGCTTCATGCTTCAAGATACTGCTTCTTA 613
Query 627 CTATTCTCGCAAGGCGTCAAGGTGGACCGAGGAGGATTCTTGTCCTGATTACATGATAAA 686
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 614 CTATTCTCGCAAGGCGTCAAGGTGGATCGAGGAGGATTCTTGTCCTGATTACATGATAAA 673
Query 687 GGTTGAGGAGTGTCTAAAGATGGAGAGGGAGAGAGTCACTCACTATCTCCATTCAATTAC 746
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct 674 GGTTGAGGAGTGTCTAAAGAGGGAGAGGGAGAGAGTCACTCACTATCTCCATTCAAGCAC 733
Query 747 CGAACCCAAACTAGTTGAGAAAATACAAAA-CGAATTGTTGGTTATGGTTACAAAAAACC 805
||||||||||||||||||||| ||||||| | |||||||||| |||||| |||||||||
Sbjct 734 TGAACCCAAACTAGTTGAGAAAGTACAAAATC-AATTGTTGGTAATGGTTGCAAAAAACC 792
Query 806 GCCTAGAAAATGAGCACTCAGGGTT-TAGTGCATTGCTAAGAGATGACAAGAAGAATGAT 864
| |||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||
Sbjct 793 GTCTAGAAAATGAGCATTCAGGGTGCT-GTGCATTGCTAAGAGATGACAAGAAGAATGAT 851
Query 865 CTCTCTAGGATATACCGTCTTTATCTTCCAATCCCTAAGAGGTTGGGACGTGTTGCAGAC 924
||||||||||| ||| ||||||||| |||||||||| | ||||| | |||| ||||||||
Sbjct 852 CTCTCTAGGATGTACAGTCTTTATCATCCAATCCCTCATAGGTTAGAACGTATTGCAGAC 911
Query 925 TTATTCAAGAAGCATATTACTGAAGAGGGAAATGCCCTTATCAAACAAGCTGACGACAAA 984
|||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |
Sbjct 912 TTATTCAAAAAGCATATTACTGAAGAGGGGAATGCCCTTATCAAACAAGCTGACGACGCA 971
Query 985 ACTACTAATCAACTACTAATTGAGCTACACAATAAGTTCATTGTCTATGTCATCGAGTGT 1044
||||||||||||||||||||||||||||||||||||| ||| || ||||||| |||||||
Sbjct 972 ACTACTAATCAACTACTAATTGAGCTACACAATAAGTACATGGTTTATGTCACCGAGTGT 1031
Query 1045 TTTCAAAACCACACCCTCTTCCATAAGGTTAGAGTTTTGTTCATGTGTGTCTATCTTTTC 1104
||||| ||||||| ||||||||||||||||||| | ||||||| ||||||||||||||
Sbjct 1032 TTTCAGAACCACAGGTTCTTCCATAAGGTTAGAGTGT-GTTCATGGGTGTCTATCTTTTC 1090
Query 1105 CAACAATATTATATCGAATGA 1125
| |||||||| ||| ||||||
Sbjct 1091 CCACAATATTTTATTGAATGA 1111
> Ahg925097 jgi|Araly1|925097|scaffold_200658.1
Length=1200
Score = 876 bits (474), Expect = 0.0
Identities = 589/642 (92%), Gaps = 17/642 (3%)
Strand=Plus/Plus
Query 435 GGTTTATTGTGAGATGCAGTCCACGGCCA-AAGAAGTTGTAATAGCACTTATTCATAAAG 493
||||||| ||||||||||||||| |||| || |||||||| ||||||||||||||||||
Sbjct 526 GGTTTATCATGAGATGCAGTCCACAGCCACAA-AAGTTGTATTAGCACTTATTCATAAAG 584
Query 494 AACGTGAGGGCGAACAGATAGATAGGGCACTAGTGAAGAACGTATTAGATATCTATGTGG 553
||||||||||||||||||| |||||||||||| |||||||||||||| ||||||| ||||
Sbjct 585 AACGTGAGGGCGAACAGATTGATAGGGCACTAATGAAGAACGTATTAAATATCTACGTGG 644
Query 554 AGAATGGGATGGGAACCTTGGAAAAATATGAAGAGGATTTTGAAAGCTTCATGCTTCAAG 613
||||||||||||||| | ||||||||||||||||||||||||||||||| |||
Sbjct 645 AGAATGGGATGGGAA-C--------ATATGAAGAGGATTTTGAAAGCTTCATGCTTGAAG 695
Query 614 ATACTGCTTCTTACTATTCTCGCAAGGCGTCAAGGTGGACCGAGGAGGATTCTTGTCCTG 673
|||||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||
Sbjct 696 ATACTGCTTCTTACTATTCTCGTAAGGCGTCAAGGTGGATCGAGGAGGATTCTTGTTCTC 755
Query 674 ATTACATGATAAAGGTTGAGGAGTGTCTAAAGATGGAGAGGGAGAGAGTCACTCACTATC 733
|||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||
Sbjct 756 ATTACATGCTAAAGGTTGAAGAGTGTCTAAAGAGGGAGAGGGAGAGAGTCACTCACTATC 815
Query 734 TCCATTCAATTACCGAACCCAAACTAGTTGAGAAAATACAAAACGAATTGTTGGTTATGG 793
||||||||| || ||||||||| ||||||||||||||||||| ||||||||||| ||||
Sbjct 816 TCCATTCAAGCACTGAACCCAAAGTAGTTGAGAAAATACAAAATGAATTGTTGGTAATGG 875
Query 794 TTACAAAAAACCGCCTAGAAAATGAGCACTCAGGGT-TTAGTGCATTGCTAAGAGATGAC 852
|| |||||||||| |||||||||||||| ||||||| | ||||||||||||||||||||
Sbjct 876 TTGCAAAAAACCGTCTAGAAAATGAGCATTCAGGGTGCT-GTGCATTGCTAAGAGATGAC 934
Query 853 AAGAAGAATGATCTCTCTAGGATATACCGTCTTTATCTTCCAATCCCT-AAGAGGTTGGG 911
||||||||||||||||||||||||||| ||||||||| |||||||||| || ||||||||
Sbjct 935 AAGAAGAATGATCTCTCTAGGATATACAGTCTTTATCATCCAATCCCTCAA-AGGTTGGG 993
Query 912 ACGTGTTGCAGACTTATTCAAGAAGCATATTACTGAAGAG-GGAAATGCCCTTATCAAAC 970
|||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||
Sbjct 994 ACGTGTTGCAGACTTATTCAAGAAGCATATTACTGAAGAGAGGAA-TGCTCTTATCAAAC 1052
Query 971 AAGCTGACGACAAAACTACTAATCAACTACTAATTGAGCTACACAATAAGTTCATTGTCT 1030
||||||||||| ||| |||||||||||||||||||||||||||||||||| ||| ||||
Sbjct 1053 AAGCTGACGACGCAACCACTAATCAACTACTAATTGAGCTACACAATAAGTACATGGTCT 1112
Query 1031 ATGTCATCGAGTGTTTTCAAAACCACACCCTCTTCCATAAGG 1072
|||||| |||||||||||| ||||||||||||||||||||||
Sbjct 1113 ATGTCACCGAGTGTTTTCAGAACCACACCCTCTTCCATAAGG 1154
Score = 534 bits (289), Expect = 4e-151
Identities = 389/437 (89%), Gaps = 8/437 (2%)
Strand=Plus/Plus
Query 7 TCGAGAAGAATGTCCCGACCCAGACAGATTAAATTTGAGGAAGGATGGTCCAACATTCAG 66
||| ||| |||| ||| || |||||| ||| |||||||| ||||||||||||||||||||
Sbjct 14 TCGTGAATAATGGCCCAACACAGACATATTGAATTTGAGCAAGGATGGTCCAACATTCAG 73
Query 67 AAAGGTATTACCAAGCTGATAAGGATTCTAGAAGGAGAGCCTGAACCA-ACATTTTATTT 125
|||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||
Sbjct 74 AAAGGTATTACCAAGCTGATAAGGATTCTAGAAGGAGAGCCTGAACCAGA-ATTTCATTC 132
Query 126 T-AGTGAATGTTTTAA-ACTTTACACGATTATCTACGATATGTGTGTCCAGAGATCCGAT 183
| | ||||| | | || | ||||||||||||||||||||||||| |||||||||||||
Sbjct 133 TGA-TGAATATATGAATA-TTTACACGATTATCTACGATATGTGCAACCAGAGATCCGAT 190
Query 184 TATTCACAGCAGCTTTATGAAAAGTATCGTAAAGTAATTGAAGATTATACTATCCAAACG 243
|| ||||||||||| ||||| |||||||||||||||||||||||||||| ||| ||||||
Sbjct 191 TACTCACAGCAGCTATATGATAAGTATCGTAAAGTAATTGAAGATTATATTATACAAACG 250
Query 244 GTGTTGCCGTCTTTAAGGGAGAAGCATGATGAAGATATGCTAAGAGAGCTTGTTAAGAGG 303
|||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 251 GTGTCCCCGTCTTTAAGGGAGAAGCATGATGAAGATATGCTAAGAGATCTTGTTAAGAGG 310
Query 304 TGGAATAACCATAAAATTATGGTCAAATGGTTAAGCA-AGTTCTTCGTTTATATTGACCG 362
||| ||||||||||| || |||| | ||||||| || | || ||| |||| |||||||
Sbjct 311 TGGGATAACCATAAAGTTCTGGTTAGATGGTTATCCAGA-TTATTCCATTATGTTGACCG 369
Query 363 TCACTTGGTTCGTCGGAGTAAGATTCCAATTCCATCACTAGATGAAGTTGGATTGACATG 422
||||| |||| |||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct 370 ACACTTTGTTCTTCGGAGTAAGATTCCAATTCCAACACTAGATGAAGTTGGATTGTCATG 429
Query 423 CTTTCTTGACCTGGTTT 439
|||||||||||||||||
Sbjct 430 CTTTCTTGACCTGGTTT 446
> Ahg338392 jgi|Araly1|338392|fgenesh1_pg.C_scaffold_2000491
Length=1215
Score = 649 bits (351), Expect = 0.0
Identities = 568/669 (85%), Gaps = 30/669 (4%)
Strand=Plus/Plus
Query 32 AGATTAAATTTGAGGAAGGATGGTCCAACATT-CAGAAAGGTATTACCAAGCTGATAAGG 90
|||||||||||||||||||||||||| | || |||||||| |||||||| ||||||||
Sbjct 17 AGATTAAATTTGAGGAAGGATGGTCCTTC-TTGGAGAAAGGTGTTACCAAGATGATAAGG 75
Query 91 ATTCTAGAAGGAGAGCCTGAACCAACATTTTATTTTAGTGAATGTTTTAAACTTTACACG 150
|||||||||||||||||||||||| ||||| | | || ||| | | || |||||||||
Sbjct 76 ATTCTAGAAGGAGAGCCTGAACCACCATTTGAATCTAACCAATATATGAATCTTTACACG 135
Query 151 ATTATCTACGA-TATGTGTGTCCAGAGATCC-GATTATTCA-CAGCAGCTTTATGA-AAA 206
| | |||| | |||||| ||||| | || ||||| ||| || ||| ||||||| |||
Sbjct 136 ACTGCCTAC-AGTATGTGCACCCAGA-AACCTGATTACTCAGCA-CAGATTTATGATAAA 192
Query 207 GTATCGT-AAAGTAATTGAAGATTATACTATC-CAAACGGTGTTGCCGTCTTTAAGGGAG 264
|||||| ||| | |||||||||||| || | ||||||||||||||||| |||||||||
Sbjct 193 -TATCGTGAAA-TGATTGAAGATTATGTTA-CACAAACGGTGTTGCCGTCGTTAAGGGAG 249
Query 265 AAGCATGATGAAGATATGCTAAGAGAGCTTGTTAAGAGGTGGAATAACCATAAAATTATG 324
|||||||||||| ||||||||||||||||||||||||||||| ||||||||||| || ||
Sbjct 250 AAGCATGATGAATATATGCTAAGAGAGCTTGTTAAGAGGTGGGATAACCATAAAGTTCTG 309
Query 325 GTCAAATGGTTAAGCAAG-TTCTTCGTTTATATTGACCGTCACT-TGGTTCGTCGGAGTA 382
|| | |||||| | | || |||||| |||||| |||||| ||| | ||| |||||| |
Sbjct 310 GTTAGATGGTTTATC-AGATTCTTCAATTATATAGACCGTTACTAT-GTTATTCGGAG-A 366
Query 383 AGATTCCAATTCCATCACTAGA-TGAAGTTGGATTGACATGCTTTC-TTGACCTGGTTTA 440
| | | ||| |||||| || |||||||| |||||||| |||| ||||||||||
Sbjct 367 A-A----AGTTCAATCACT-GAGGGAAGTTGGCTTGACATG-TTTCAACAACCTGGTTTA 419
Query 441 TTGTGAGATGCAGTCCACGGCCAAAGAAGTTGTAATAGCACTTATTCATAAAGAACGTGA 500
| ||||||||||||||||||||| ||||| |||||| |||||| ||||||||||||||||
Sbjct 420 TCGTGAGATGCAGTCCACGGCCACAGAAGCTGTAATTGCACTTTTTCATAAAGAACGTGA 479
Query 501 GGGCGAACAGATAGATAGGGCACTAGTGAAGAACGTATTAGATATCTATGTGGAGAATGG 560
|||||||||||| ||||||| ||||||||| || ||||||||| ||||||| ||||||||
Sbjct 480 GGGCGAACAGATTGATAGGGAACTAGTGAAAAATGTATTAGATGTCTATGTAGAGAATGG 539
Query 561 GATGGGAACCT-TGGAAAAATATGAAGAGGATTTTGAAAGCTTCATGCTTCAAGATACTG 619
| |||||| || || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 540 GCTGGGAA-CTATGAAAAAATATGAAGAGGATTTTGAAAGCTTCATGCTTCAAGATACTG 598
Query 620 CTTCTTACTATTCTCGCAAGGCGTCAAGGTGGACCGAGGAGGATTCTTGTCCTGATTACA 679
| || |||||||||||||||||||||| ||||| | ||| |||||||||||||| |||||
Sbjct 599 CCTCATACTATTCTCGCAAGGCGTCAAAGTGGATCAAGGGGGATTCTTGTCCTGCTTACA 658
Query 680 TGATAAAGG 688
|| ||||||
Sbjct 659 TGCTAAAGG 667
> Ahg925090 jgi|Araly1|925090|scaffold_200651.1
Length=716
Score = 621 bits (336), Expect = 3e-177
Identities = 564/670 (84%), Gaps = 32/670 (5%)
Strand=Plus/Plus
Query 32 AGATTAAATTTGAGGAAGGATGGTCCAACATTCAGAAAGGTATTACCAAGCTGATAAGGA 91
|||||||||||||||||||||||||| |||| || ||||| |||| ||||||||||| |
Sbjct 35 AGATTAAATTTGAGGAAGGATGGTCCTACATACATCAAGGTGTTACTAAGCTGATAAGAA 94
Query 92 TTCTAGAAGGAGAGCCTGAACCAACATT-TTATTTTAGTGAATGTTTTAAACTTTACACG 150
|| |||||||||||||||||||| |||| || | || ||| | | || || ||||||
Sbjct 95 TTTTAGAAGGAGAGCCTGAACCAGCATTAGAATCTCAG-CAATATATGAATCTGTACACG 153
Query 151 ATTATCTACGATATGTGTGTCC-AGAGATCC-GATTATTCACAGCAGCTTTATGAAAAGT 208
| || ||||| |||||| ||| ||| | || |||| ||||| ||||||||||| ||||
Sbjct 154 ACTACCTACGTTATGTG-CTCCAAGA-ACCCTAATTACTCACAACAGCTTTATGATAAGT 211
Query 209 ATCGTAAAGTAATTGAAGATTATACTATCCAAACGGTGTTGCCGTCTTTAAGGGAGAAGC 268
||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||
Sbjct 212 ATCGTGAAGTAATTGAAAATTATACAATCCAAACGGTGTTGCCGTCTTTAAGGGAGAAGC 271
Query 269 ATGATGAA-GATATGCTAAGAGAGCTTGTTAAGAGGTGGAATAACCATAAAATTATGGTC 327
|||||||| | ||||||||||||||||| |||||||||||||||||||||| || ||||
Sbjct 272 ATGATGAATG-TATGCTAAGAGAGCTTGCTAAGAGGTGGAATAACCATAAATTTTTGGTT 330
Query 328 AAATGGTTAAGCAAG-TTCTTCG-TTTATATTGAC-CGTCACTTGGTTCGTCGGAGTAAG 384
| || ||| ||| || ||||| | ||||||| ||| | || ||| ||| || | |||
Sbjct 331 AGATTGTTTAGC-AGATTCTT-GCTTTATATAGACTCTTC-CTTTGTT--TC-TA-AAAG 383
Query 385 A-TTCCAATTCCATCACTAGA-TGAAGTTGGATTGACA-TGCTTTCTTGACCTGGTTTAT 441
| | | |||||||||| || |||||||| |||| | ||||| | ||||||||||||
Sbjct 384 AGGT-C--TTCCATCACT-GAGGGAAGTTGGCTTGA-ATTGCTTCCACGACCTGGTTTAT 438
Query 442 TGTGAGATGCAGTCCACGGCCAAAGAAGTTGTAATAGCACTTATTCATAAAGAACGTGAG 501
|||| |||||||||| ||||| ||||| |||||||||||||||||||||||| ||||||
Sbjct 439 CGTGAAATGCAGTCCATGGCCACAGAAGCTGTAATAGCACTTATTCATAAAGAGCGTGAG 498
Query 502 GGCGAACAGATAGATAGGGCACTAGTGAAG-AACGTATTAGATATCTATGTGGAGAATGG 560
|| ||||| || ||||| | ||||||| || |||||| ||||| ||| | | ||||||||
Sbjct 499 GGTGAACAAATTGATAGAGAACTAGTG-AGAAACGTAATAGATGTCTTTATTGAGAATGG 557
Query 561 GATGGGAACCT-TGGAAAAATATGAAGAGGATTTTGAAAGCTTCATGCTTCAAGATACTG 619
|||||||| || || |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 558 GATGGGAA-CTATGAAAAAATATGAAGAGGATTTTGAAAGCTTCATGCTCCAAGATACTG 616
Query 620 CTTCTTACTATTCTCGCAAGGCGTCAAGGTGGA-CCGAGGAGGATTCTTGTCCTGATTAC 678
|||||||||||||| |||||||| ||||||||| || || || ||||||||| |||||||
Sbjct 617 CTTCTTACTATTCTAGCAAGGCGACAAGGTGGATCCAAG-AGTATTCTTGTCTTGATTAC 675
Query 679 ATGATAAAGG 688
| | ||||||
Sbjct 676 ACGCTAAAGG 685
> Ahg925091 jgi|Araly1|925091|scaffold_200652.1
Length=719
Score = 566 bits (306), Expect = 2e-160
Identities = 555/671 (83%), Gaps = 33/671 (5%)
Strand=Plus/Plus
Query 33 GATTAAATTTGAGGAAGGATGGTCCAACATT-CAGAAAGGTATTACCAAG-CTGATAAGG 90
||||||||||||||||||||||||| || || ||||||||||||||| || ||||||| |
Sbjct 36 GATTAAATTTGAGGAAGGATGGTCCTAC-TTGCAGAAAGGTATTACC-AGACTGATAA-G 92
Query 91 A-TTCTAGAAGGAGAGCCTGAACCA-ACA-TTTTATTTTAGTGAATGTTTTAAACTTTAC 147
| ||||||||||||||||||| || || || | | || | ||| | ||||||||
Sbjct 93 ACATCTAGAAGGAGAGCCTGAA-CAGGCACTTAAAACTCAG-CATTGTATGGAACTTTAC 150
Query 148 -ACGATTATCTACGATATGTGTGTCCAGAGATCC-GATTATTCACAGCAGCTTTATGAAA 205
|| | | |||| ||||||| ||||| |||| |||| ||||| |||||||| || |
Sbjct 151 AAC-ACTGCCTACCATATGTGCACCCAGA-ATCCTAATTACTCACAACAGCTTTACGATA 208
Query 206 AGTATCGTAAAGTAATTGAAGATTATACTATCCAAACGGTGTTGCCGTCTTTAAGGGAGA 265
||||||| |||| ||||||||||||||||| ||||||||| | || |||||||||||||
Sbjct 209 AGTATCGCGAAGTGATTGAAGATTATACTATGCAAACGGTGCTACCATCTTTAAGGGAGA 268
Query 266 AGCATGATGAAGATATGCTAAGAGAGCTTGTTAAGAGGTGGAATAACCATAAAATTATGG 325
||||||||||| ||||| | ||||||||||||||||||||||||||||||||| ||||||
Sbjct 269 AGCATGATGAATATATGTTGAGAGAGCTTGTTAAGAGGTGGAATAACCATAAACTTATGG 328
Query 326 TCAAATGGTTAAG-CA-AGTTCTTCGTTTATATTGACCG-TCACTTGGTTCGTCGGAGTA 382
| | | ||| || || | |||| | |||| |||| | | |||| ||||| ||| |
Sbjct 329 TTAGACAGTT-AGCCATA-ATCTTTGGTTATCTTGAAGGAT-ACTTTTTTCGTTGGA--A 383
Query 383 A-G-ATTCCAATTCCATCACTAGA-TGAAGTTGGATTGACATGCTTTCTTGACCTGGTTT 439
| | | | |||| ||||||| || |||||||| |||| || ||| | ||||||||||
Sbjct 384 ACGCA-T-AAATT-CATCACT-GAGGGAAGTTGGCTTGATATACTTCCACGACCTGGTTT 439
Query 440 ATTGTGAGATGCAGTCCACGGCCAAAGAAGTTGTAATAGCACTTATTCATAAAGAACGTG 499
| ||||||||| ||| |||||| ||||| |||||||||||||||| ||||||||||||
Sbjct 440 ACCATGAGATGCATTCCTCGGCCACAGAAGCTGTAATAGCACTTATTGATAAAGAACGTG 499
Query 500 AGGGCGAACAGATAGATAGGGCACTAGTGAAG-AACGTATTAGATATCTATGTGGAGAAT 558
|||||||||| || ||||| | ||||||| || || ||| || || ||| ||| ||||||
Sbjct 500 AGGGCGAACAAATTGATAGAGAACTAGTG-AGAAATGTAATACATGTCTTTGTTGAGAAT 558
Query 559 GGGATGGGAACCT-TGGAAAAATATGAAGAGGATTTTGAAAGCTTCATGCTTCAAGATAC 617
|||||||| | || | ||||||||||||||||||||||||||||||||||| |||||||
Sbjct 559 GGGATGGG-ATCTATAAAAAAATATGAAGAGGATTTTGAAAGCTTCATGCTTGAAGATAC 617
Query 618 TGCTTCTTACTATTCTCGCAAGGCGTCAAGGTGGACCGAGGAGGATTCTTGTCCTGATTA 677
||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct 618 TGCTTCTTACTATTCCCGCAAGGCGTCAAGGTGGATCGAGGAGGATTCTTGTCTTGATTA 677
Query 678 CATGATAAAGG 688
|| ||||||||
Sbjct 678 CACGATAAAGG 688
> Ahg338401 jgi|Araly1|338401|fgenesh1_pg.C_scaffold_2000500
Length=561
Score = 326 bits (176), Expect = 3e-88
Identities = 330/401 (82%), Gaps = 23/401 (6%)
Strand=Plus/Plus
Query 32 AGATTAAATTTGAGGAAGGATGGTC-CAACATTCAGAAAGGTATTACCAAGCTGATAAGG 90
|||||| |||||||||||||||| | |||| ||||||||| ||||||||||||||| |
Sbjct 17 AGATTACATTTGAGGAAGGATGG-CTTTACATACAGAAAGGTGTTACCAAGCTGATAAAG 75
Query 91 ATTCTAGAAGGAGAGCCTGAACCAACATTTTAT-TTTAGTGAATGTTTTAAACTTTACAC 149
||| |||||||||||||||||||| ||||| || | || |||| | | || ||||| ||
Sbjct 76 ATTATAGAAGGAGAGCCTGAACCACCATTTGATGCTGAG-GAATATATGAATCTTTATAC 134
Query 150 GATTATCTACGATATGTG-TGTCCAGAGATCC-GATTATTCACAGCAGCTTTATGAAAAG 207
|| ||||||| | ||||| | ||| ||| | ||| ||| | |||||||||||||||
Sbjct 135 GACTATCTACAAAATGTGCAG-CCA-CTCTCCTGGTTACTCAAAACAGCTTTATGAAAAG 192
Query 208 TATCGTAAAGTAATTGAAGATTATACTATCCAAACGGTGTTGCCGTCTTTAAGGGAGAAG 267
|||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 193 TATCGTGAAGTAATTGAAGATTATACTATCCAAACGGTGTTGCCGTCGTTAAGAGAGAAG 252
Query 268 CATGATGAAGATATGCTAAGAGAGCTTGTTAAGAGGTGGAATAACCATAAAATTATGGTC 327
|||||||||||||||||||||||||||||||||| |||| ||||||||||| || ||||
Sbjct 253 CATGATGAAGATATGCTAAGAGAGCTTGTTAAGAAGTGGGATAACCATAAAGTTCTGGTT 312
Query 328 AAATGGTTAAGCA-AGTTCTT-CGTTTATATTGACCGTCACTTGGTTCGTCGGAGTAAGA 385
| ||||||| || | ||||| | || || ||||| || |||| | |||| | || |
Sbjct 313 AGATGGTTATCCAGA-TTCTTTC-TTGATGTTGACTGTTACTTAGCTCGTAG-AG---G- 365
Query 386 TTCCAATTCCATCACT-AGATGAAGTTGGATTGACATGCTT 425
| | ||||| ||| ||| |||||||| |||||||||||
Sbjct 366 --C-A-TTCCAAGACTGAGA-GAAGTTGGCTTGACATGCTT 401
Score = 209 bits (113), Expect = 3e-53
Identities = 141/154 (92%), Gaps = 4/154 (3%)
Strand=Plus/Plus
Query 480 ACTTATTCATAAAGAACGTGAGGGCGAACAGA-TAGATAGGGCACTAGTGAAGAACGTAT 538
||| ||||||||||| |||||||| ||||||| | |||| |||||| ||||| ||| |||
Sbjct 408 ACTGATTCATAAAGAGCGTGAGGGAGAACAGACT-GATAAGGCACTGGTGAAAAACATAT 466
Query 539 TAGATATCTATGTGGAGAATGGGATGGGAACCT-TGGAAAAATATGAAGAGGATTTTGAA 597
||||||||||||| |||||||||||||||| || ||||||||||||||||||||||||||
Sbjct 467 TAGATATCTATGTAGAGAATGGGATGGGAA-CTATGGAAAAATATGAAGAGGATTTTGAA 525
Query 598 AGCTTCATGCTTCAAGATACTGCTTCTTACTATT 631
|| |||||||||||||||||||||||||||||||
Sbjct 526 AGATTCATGCTTCAAGATACTGCTTCTTACTATT 559
> Ahg338398 jgi|Araly1|338398|fgenesh1_pg.C_scaffold_2000497
Length=543
Score = 257 bits (139), Expect = 1e-67
Identities = 185/207 (89%), Gaps = 4/207 (2%)
Strand=Plus/Plus
Query 484 ATTCATAAAGAACGTGAGGGCGAACAGATAGATAGGGCACTAGTGAAG-AACGTATTAGA 542
||||||||||||||||| |||||||| || ||||| | ||||||| || ||| || || |
Sbjct 145 ATTCATAAAGAACGTGAAGGCGAACAAATTGATAGAGAACTAGTG-AGAAACATAATAAA 203
Query 543 TATCTATGTGGAGAATGGGATGGGAACCTTGGAAA-AATATGAAGAGGATTTTGAAAGCT 601
| ||||||| ||||||||||||||| || | ||| ||||||||||||||||||||||||
Sbjct 204 TGTCTATGTTGAGAATGGGATGGGATCCAT-AAAACAATATGAAGAGGATTTTGAAAGCT 262
Query 602 TCATGCTTCAAGATACTGCTTCTTACTATTCTCGCAAGGCGTCAAGGTGGACCGAGGAGG 661
|||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||
Sbjct 263 TCATGCTTCAAGATACTGCTTCTTACTATTTTAGCAAGGCGTCAAGGTGGATCGAGGAGG 322
Query 662 ATTCTTGTCCTGATTACATGATAAAGG 688
|||||||||||||||||| | ||||||
Sbjct 323 ATTCTTGTCCTGATTACACGCTAAAGG 349
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 41935208700
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5