BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G59870.1
Length=4759
Score E
Sequences producing significant alignments: (Bits) Value
Ahg475320 jgi|Araly1|475320|fgenesh2_kg.2__450__AT1G59870.1 7468 0.0
Ahg471713 jgi|Araly1|471713|fgenesh2_kg.1__1667__AT1G15210.1 1888 0.0
> Ahg475320 jgi|Araly1|475320|fgenesh2_kg.2__450__AT1G59870.1
Length=4654
Score = 7468 bits (4044), Expect = 0.0
Identities = 4359/4513 (97%), Gaps = 13/4513 (0%)
Strand=Plus/Plus
Query 118 AAACTTTGAGCCAAAGTCACAAGCTTTCTTGGTGAACGATGGATTACAATCCAAATCTTC 177
||||||||| ||||| ||||| | || ||| || |||||||||||||||||||||||
Sbjct 63 AAACTTTGATACAAAGACACAAAC-TT-TTGAAGAGGGATGGATTACAATCCAAATCTTC 120
Query 178 CTCCTTTAGGAGGAGGTGGTGTTAGTATGAGAAGAAGCATAAGTCGAAGTGTAAGCAGAG 237
|||| |||||||||||||||| |||||||||||||||||||||| |||||||||||||||
Sbjct 121 CTCCATTAGGAGGAGGTGGTGGTAGTATGAGAAGAAGCATAAGTAGAAGTGTAAGCAGAG 180
Query 238 CAAGTAGGAACATTGAAGATATCTTCTCATCTGGTTCAAGAAGAACACAATCAGTCAACG 297
||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 181 CAAGTAGAAACTTTGAAGATATCTTCTCATCAGGTTCAAGAAGAACACAATCAGTCAACG 240
Query 298 ACGATGAAGAAGCTCTTAAATGGGCTGCCATTGAGAAGCTACCAACTTACAGTCGTCTCC 357
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 241 ACGATGAAGAAGCTCTTAAATGGGCAGCCATTGAGAAGCTACCAACTTACAGTCGTCTTC 300
Query 358 GAACCACTCTCATGAACGCTGTAGTCGAAGACGATGTTTACGGTAACCAGCTCATGAGCA 417
| |||||||||||||||||||| || |||||||||||||||||||||||||||||||| |
Sbjct 301 GTACCACTCTCATGAACGCTGTTGTTGAAGACGATGTTTACGGTAACCAGCTCATGAGTA 360
Query 418 AGGAGGTTGATGTAACCAAGCTTGATGGTGAAGATCGTCAGAAGTTTATTGACATGGTTT 477
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 361 AGGAGGTTGATGTAACCAAGCTTGATGGTGAAGATCGTCAGAAGTTCATTGACATGGTTT 420
Query 478 TCAAAGTAGCTGAGCAAGATAATGAAAGGATCTTGACTAAGCTAAGAAACAGGATCGATA 537
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 421 TCAAAGTAGCTGAGCAAGATAATGAAAGGATCTTGACTAAGCTAAGAAACAGAATCGATA 480
Query 538 GAGTTGGTATCAAACTTCCAACTGTTGAAGTCAGGTACGAGCATTTGACGATTAAAGCTG 597
|||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct 481 GAGTTGGTATCAAACTACCAACAGTTGAAGTCAGGTACGAGCATTTGACGATTAAAGCTG 540
Query 598 ATTGTTACACTGGTAATAGATCTCTTCCTACACTTTTGAATGTTGTGAGGAACATGGGAG 657
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 541 ATTGTTACACTGGTAATAGATCTCTTCCTACACTTTTGAATGTTGTGAGGAATATGGGAG 600
Query 658 AGTCTGCTTTAGGTATGATTGGTATTCAATTTGCTAAGAAAGCTCAGCTTACGATTCTTA 717
| || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 601 AATCAGCTTTAGGTCTGATTGGTATTCAATTTGCTAAGAAAGCTCAGCTTACGATTCTTA 660
Query 718 AAGATATCTCTGGGGTTATTAAACCTGGAAGGATGACACTTTTGTTGGGTCCTCCTTCTT 777
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 AAGATATCTCTGGGGTTCTTAAACCTGGAAGGATGACACTTTTGTTGGGTCCTCCTTCTT 720
Query 778 CTGGTAAGACCACTCTTTTGTTGGCTTTAGCTGGGAAACTTGATAAATCTCTACAAGTCA 837
||||||||||||| ||| |||||||||||||||| ||||| ||||| |||| |||||||
Sbjct 721 CTGGTAAGACCACGCTTCTGTTGGCTTTAGCTGGTAAACTCGATAAGGCTCTCCAAGTCA 780
Query 838 GTGGTGATATTACTTACAATGGTTACCAACTCGATGAGTTTGTTCCGAGAAAGACCTCTG 897
||||||||||||||||||||||||||| ||||| |||||||| || |||||||||||||
Sbjct 781 GTGGTGATATTACTTACAATGGTTACCGTCTCGACGAGTTTGTGCCAAGAAAGACCTCTG 840
Query 898 CTTACATTAGTCAGAACGATCTTCATGTTGGTATCATGACTGTTAAGGAGACTCTTGACT 957
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 841 CTTACATTAGTCAGAACGATCTTCATGTTGGTATCATGACTGTTAAGGAGACTCTTGATT 900
Query 958 TCTCTGCTAGGTGTCAAGGTGTTGGTACTCGTTATGATCTGTTGAATGAGCTTGCGAGGA 1017
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 901 TCTCTGCTAGGTGTCAAGGTGTTGGTACTCGTTATGATCTGTTGAATGAGCTTGCCAGGA 960
Query 1018 GAGAAAAGGACGCTGGTATATTCCCGGAAGCCGATGTTGATCTCTTCATGAAAGCTTCTG 1077
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct 961 GAGAAAAGGACGCTGGGATATTCCCGGAAGCCGATGTTGATCTCTTCATGAAAGCTTCGG 1020
Query 1078 CTGCTCAAGGTGTTAAGAACAGTCTCGTCACTGATTATACTCTCAAAATTTTGGGGCTTG 1137
|||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||
Sbjct 1021 CTGCTCAAGGTGTTAAGAGCAGTATCGTCACTGATTATACTCTCAAAATTTTGGGGCTTG 1080
Query 1138 ACATTTGCAAAGACACAATAGTTGGAGATGACATGATGAGAGGTATATCTGGAGGTCAGA 1197
|||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||
Sbjct 1081 ACATTTGCAAAGACACCATAGTTGGAGATGACATGATGAGAGGTATCTCCGGAGGTCAGA 1140
Query 1198 AGAAACGTGTCACAACTGGTGAGATGATTGTTGGACCTACTAAGACACTCTTCATGGACG 1257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1141 AGAAACGTGTCACAACTGGTGAGATGATTGTTGGACCTACTAAGACACTCTTCATGGACG 1200
Query 1258 AAATATCCACTGGTCTTGACAGTTCCACTACTTTCCAAATCGTCAAGTGTCTGCAACAAA 1317
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1201 AAATATCCACTGGTCTTGACAGTTCCACTACTTTTCAAATCGTCAAGTGTCTGCAACAAA 1260
Query 1318 TCGTTCACCTCAATGAAGCCACGGTGCTCATGTCTCTCCTCCAGCCTGCTCCTGAGACTT 1377
| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct 1261 TTGTTCACCTCAATGAAGCCACGGTGCTCATGTCTCTTCTCCAGCCTGCTCCTGAGACAT 1320
Query 1378 TTGATTTATTCGATGATATCATCTTGGTGTCGGAAGGTCAGATCGTGTACCAAGGACCGA 1437
|||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||| |
Sbjct 1321 TTGATTTATTCGATGACATCATTTTGTTGTCGGAAGGTCAGATCGTGTACCAAGGACCAA 1380
Query 1438 GAGACAACATTCTTGAGTTCTTTGAGAGCTTTGGGTTCAAGTGTCCTGAGAGAAAAGGAA 1497
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1381 GGGACAACATTCTTGAGTTCTTTGAGAGCTTTGGGTTCAAGTGTCCTGAGAGAAAAGGAA 1440
Query 1498 CAGCTGATTTCCTGCAAGAGGTTACTTCCAAGAAAGATCAAGAACAGTACTGGGTGAACC 1557
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1441 CAGCTGATTTCTTGCAAGAGGTTACTTCCAAGAAAGATCAAGAACAGTACTGGGTGAACC 1500
Query 1558 CGAACAGACCTTATCACTACATTCCGGTTTCAGAGTTTGCCAGTAGATACAAGAGTTTCC 1617
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1501 CGAACAGACCTTATCGCTACATTCCGGTTTCAGAGTTTGCCAGTAGATACAAGAGTTTCC 1560
Query 1618 ATGTTGGGACGAAGATGTCTAACGAACTTGCAGTACCGTTCGATAAGTCTCGCGGCCACA 1677
||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1561 ATGTTGGGACGCAGATTTCTAACGAACTTGCAGTACCGTTCGATAAGTCTCGCGGCCACA 1620
Query 1678 AAGCAGCTCTTGTGTTCGATAAGTACTCTGTCTCAAAGAGGGAGCTTCTCAAGAGCTGTT 1737
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1621 AAGCGGCTCTTGTGTTCGATAAGTACTCTGTCTCAAAGAGGGAGCTTCTCAAGAGCTGTT 1680
Query 1738 GGGACAAAGAGTGGCTGCTTATGCAGCGAAACGCGTTCTTCTATGTTTTCAAGACTGTCC 1797
|||||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||
Sbjct 1681 GGGACAAAGAGTGGCTGCTTATGCAGAGAAACTCGTTCTTCTACGTTTTCAAGACTGTCC 1740
Query 1798 AGATCGTCATCATTGCTGCAATCACGTCTACACTCTTCCTGAGAACCGAAATGAACACAA 1857
||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1741 AGATCATCATCATCGCTGCAATCACGTCTACACTCTTCCTGAGAACCGAAATGAACACAA 1800
Query 1858 GAAACGAGGGTGATGCTAATCTCTACATAGGAGCATTGCTATTTGGAATGATCATCAACA 1917
||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||
Sbjct 1801 GAAACGAGGGTGATGCTAACCTCTACATTGGAGCATTGCTTTTTGGAATGATCATCAACA 1860
Query 1918 TGTTTAATGGGTTTGCGGAGATGGCTATGATGGTTTCAAGACTCCCTGTGTTCTACAAAC 1977
|||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1861 TGTTTAATGGGTTTGCAGAGATGGCTATGATGGTTTCGAGACTCCCTGTGTTCTACAAAC 1920
Query 1978 AGAGGGATCTCTTGTTTTATCCATCCTGGACCTTCTCACTTCCCACTTTCTTGCTTGGGA 2037
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1921 AGAGGGATCTCTTGTTTTATCCATCCTGGACCTTCTCACTTCCCACTTTCTTGCTTGGGA 1980
Query 2038 TTCCAAGCTCAATATTAGAATCGACGGCTTGGATGGTGGTGACTTATTACTCCATTGGTT 2097
|||| ||||||||| ||||||||||||| ||||||||||| |||||||||||||| ||||
Sbjct 1981 TTCCGAGCTCAATAATAGAATCGACGGCATGGATGGTGGTCACTTATTACTCCATCGGTT 2040
Query 2098 TTGCACCTGACGCCAGCCGCTTCTTCAAGCAGTTTCTTCTGGTGTTTCTGATTCAACAAA 2157
|||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2041 TTGCACCTGACGCCGGCCGCTTCTTCAAGCAGTTTCTCCTGGTGTTTCTGATTCAACAAA 2100
Query 2158 TGGCTGCATCCCTCTTTAGGTTGATTGCTTCTGTGTGCAGAACCATGATGATTGCTAATA 2217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2101 TGGCTGCATCCCTCTTTAGGTTGATTGCTTCTGTGTGCAGAACCATGATGATTGCTAATA 2160
Query 2218 CTGGTGGTGCTCTCACTCTACTTCTTGTGTTCTTGCTCGGAGGCTTCCTTCTTCCGAAAG 2277
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2161 CTGGTGGTGCTCTTACTCTACTTCTTGTGTTCTTGCTCGGAGGCTTCCTTCTTCCGAAA- 2219
Query 2278 GCA-AGATTCCTGACTGGTGGGGTTGGGCTTACTGGGTATCTCCTCTCACCTATGCTTTC 2336
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2220 AAAGAGATTCCTGACTGGTGGGGTTGGGCTTACTGGGTATCTCCTCTCACCTATGCTTTC 2279
Query 2337 AACGGTCTAGTAGTCAATGAAATGTTTGCTCCCAGATGGATGAACAAAATGGCTTCTTCT 2396
|| |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2280 AATGGTCTAGTCGTCAATGAGATGTTTGCTCCCAGATGGATGAACAAAATGGCTTCTTCT 2339
Query 2397 AACAGCACAATAAAGCTTGGAACTATGGTGCTTAATACTTGGGATGTCTACCATCAAAAG 2456
||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2340 AACAGTACAATAAGGCTTGGAACTATGGTGCTTAATACGTGGGATGTCTACCATCAAAAA 2399
Query 2457 AACTGGTACTGGATTTCAGTTGGAGCCTTGCTTTGTTTCACAGCCCTCTTCAACATTCTA 2516
||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||
Sbjct 2400 AACTGGTACTGGATTGCAGTTGGAGCCTTGCTTGGTTTCACAGCCCTCTTCAACCTTCTA 2459
Query 2517 TTCACCTTGGCACTTACCTATCTCAACCCTCTTGGGAAGAAGGCAGGTTTACTTCCAGAA 2576
|||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2460 TTCACCGTGGCACTTACCTATCTCAACCCTCTTGGAAAGAAGGCAGGTTTACTTCCAGAA 2519
Query 2577 GAAGAAAATGAAGACGCTGATCAGGGGAAAGATCCAATGCGTAGATCTTTGTCTACTGCA 2636
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2520 GAAGAAAATGAAGACGCTGATCAGGGAAAAGATCCAATGCGTAGATCTTTGTCTACTGCA 2579
Query 2637 GATGGGAACAGAAGAGGAGAGGTCGCAATGGGGAGAATGAGTAGGGACTCTGCGGCTGAA 2696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2580 GATGGGAACAGAAGAGGAGAGGTCGCAATGGGGAGAATGAGTAGGGACTCTGCGGCTGAA 2639
Query 2697 GCATCAGGTGGTGCAGGCAATAAGAAAGGAATGGTTCTTCCTTTCACTCCTTTAGCTATG 2756
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2640 GCATCAGGTGGTGCAGGCAATAAGAAAGGAATGGTTCTTCCTTTCTCTCCTTTAGCTATG 2699
Query 2757 TCCTTTGACGACGTCAAATACTTTGTTGACATGCCTGGGGAAATGAGAGACCAAGGAGTT 2816
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2700 TCCTTTGACGACGTCAAATACTTTGTTGACATGCCTGCGGAAATGAGAGACCAAGGAGTT 2759
Query 2817 ACAGAAACAAGACTCCAACTGCTTAAAGGTGTGACTGGTGCATTTAGGCCAGGAGTTTTG 2876
|||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2760 ACAGAAACCAGACTGCAACTGCTTAAAGGTGTGACTGGTGCATTTAGGCCCGGAGTTTTG 2819
Query 2877 ACTGCGCTTATGGGAGTGAGTGGTGCCGGTAAGACTACGCTTATGGACGTTTTGGCCGGA 2936
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2820 ACTGCACTTATGGGAGTGAGTGGTGCCGGTAAGACTACGCTTATGGACGTTTTGGCCGGA 2879
Query 2937 AGGAAAACAGGTGGATACATTGAAGGAGATGTGAGAATATCAGGATTCCCAAAGGTTCAA 2996
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2880 AGGAAAACAGGAGGATACATTGAAGGAGATGTGAGAATATCAGGATTCCCAAAGGTTCAA 2939
Query 2997 GAAACATTTGCTAGAATCTCAGGATATTGTGAGCAGACCGATATTCACTCCCCGCAAGTA 3056
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2940 GAGACATTTGCTAGAATCTCAGGATATTGTGAGCAGACCGATATTCACTCCCCGCAAGTC 2999
Query 3057 ACAGTCAGAGAATCTCTGATTTTCTCTGCTTTCCTTCGTCTTCCTAAAGAAGTCGGCAAA 3116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3000 ACAGTCAGAGAATCTCTGATTTTCTCTGCTTTCCTTCGTCTTCCTAAAGAAGTCGGCAAA 3059
Query 3117 GATGAAAAAATGATGTTTGTGGATCAAGTGATGGAATTGGTAGAGCTGGACAGTCTTAGG 3176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3060 GATGAAAAAATGATGTTTGTGGATCAAGTGATGGAATTGGTAGAGCTGGACAGTCTTAGG 3119
Query 3177 GACTCCATTGTTGGTTTACCGGGTGTCACGGGGCTTTCCACGGAGCAGAGAAAGAGACTG 3236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3120 GACTCCATTGTTGGTTTACCGGGTGTCACGGGGCTTTCCACGGAGCAGAGAAAGAGACTG 3179
Query 3237 ACAATCGCGGTGGAGCTTGTAGCCAACCCTTCCATCATCTTTATGGATGAGCCAACTTCA 3296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3180 ACAATCGCGGTGGAGCTTGTAGCCAACCCTTCCATCATCTTTATGGATGAGCCAACTTCA 3239
Query 3297 GGGCTAGACGCTAGAGCAGCGGCTATTGTGATGAGGGCGGTAAGGAACACAGTGGACACT 3356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3240 GGGCTAGACGCTAGAGCAGCGGCTATTGTGATGAGGGCGGTAAGGAACACAGTGGACACT 3299
Query 3357 GGAAGAACCGTGGTCTGCACCATTCATCAGCCTAGCATTGATATCTTTGAAGCATTTGAT 3416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3300 GGAAGAACCGTGGTCTGCACCATTCATCAGCCTAGCATTGATATCTTTGAAGCATTTGAT 3359
Query 3417 GAATTGATGCTGATGAAGAGAGGAGGACAAGTGATTTACGCGGGTCCATTGGGTCAAAAC 3476
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 3360 GAATTGATGCTGATGAAGAGAGGAGGACAAGTGATTTACGCTGGTCCATTGGGTCAAAAC 3419
Query 3477 TCTCACAAGGTGGTTGAGTACTTTGAATCTTTCCCCGGAGTGTCCAAGATTCCAGAAAAG 3536
||||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||||
Sbjct 3420 TCTCACAAGGTGGTTGAGTACTTCGAATCTTTCCCCGGAGTGCCCAAGATTCCAGCAAAG 3479
Query 3537 TATAACCCGGCCACTTGGATGCTCGAAGCTAGCTCACTCGCCGCTGAGCTAAAGCTTAGT 3596
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct 3480 TATAACCCGGCCACTTGGATGCTCGAAGCTAGCTCACTCGCCGCTGAGCTTAAGCTAAGT 3539
Query 3597 GTTGACTTTGCTGAGTTATACAATCAATCAGCATTGCACCAGCGAAACAAAGCGTTGGTA 3656
||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct 3540 GTTGACTTTGCTGAGTTATACAATCAATCCGCATTACACCAGCGAAACAAAGCGTTGGTA 3599
Query 3657 AAAGAACTAAGTGTACCACCAGCAGGAGCATCAGATCTTTACTTTGCTACACAATTCTCA 3716
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 3600 AAAGAACTAAGTGTACCACCAGAAGGAGCATCAGATCTTTACTTTGCTACACAATTCTCA 3659
Query 3717 CAAAACACATGGGGACAGTTCAAATCATGCTTATGGAAACAATGGTGGACGTATTGGAGA 3776
|||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct 3660 CAAAACACATGGGGACAGTTCAAATCATGCTTATGGAAGCAATGGTGGACTTATTGGAGA 3719
Query 3777 TCTCCAGACTACAATCTTGTCCGTTTCATCTTCACATTGGCAACATCTCTCTTGATTGGT 3836
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 3720 TCTCCAGACTACAATCTTGTCCGGTTCATCTTCACATTGGCAACATCTCTCTTGATTGGT 3779
Query 3837 ACAGTCTTCTGGCAAATCGGAGGTAACAGGTCGAACGCAGGGGATCT-AACAATGGTGAT 3895
|| ||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||
Sbjct 3780 ACCGTCTTCTGGCAAATCGGAGGTAACAGGTCGAACGCAGGGGA-CTTAACAATGGTTAT 3838
Query 3896 AGGAGCATTGTATGCCGCGATTATCTTCGTGGGAATCAACAACTGTTCAACAGTACAACC 3955
|||||||||||| |||||| |||| || ||||||||||||||||||||||||||||||||
Sbjct 3839 AGGAGCATTGTACGCCGCGGTTATTTTTGTGGGAATCAACAACTGTTCAACAGTACAACC 3898
Query 3956 GATGGTTGCAGTGGAAAGAACAGTGTTCTACAGAGAAAGAGCAGCAGGAATGTACTCAGC 4015
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 3899 GATGGTTGCAGTGGAAAGAACTGTGTTCTACAGAGAAAGAGCAGCAGGAATGTACTCAGC 3958
Query 4016 CATGCCATATGCCATCTCTCAAGTCACTTGTGAGCTTCCCTATGTCCTTATTCAAACCGT 4075
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 3959 CATGCCATATGCCATCTCTCAAGTCACTTGTGAGCTTCCCTATGTCCTTATTCAGACCGT 4018
Query 4076 TTACTACTCACTCATCGTCTACGCCATGGTTGGTTTCGAATGGAAAGCCGAAAAGTTCTT 4135
||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct 4019 TTACTACTCACTCATCGTCTATGCCATGGTTGGTTTCGAGTGGAAAGCCGAAAAGTTCTT 4078
Query 4136 CTGGTTCGTCTTCGTTAGCTACTTCTCATTCCTCTACTGGACTTACTACGGCATGATGAC 4195
||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4079 CTGGTTCCTCTTTGTTAGCTACTTCTCATTCCTCTACTGGACTTACTACGGCATGATGAC 4138
Query 4196 TGTTTCCCTCACACCAAACCAACAAGTCGCTTCGATTTTCGCCTCAGCGTTTTACGGTAT 4255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4139 TGTTTCCCTCACACCAAACCAACAAGTCGCTTCGATTTTCGCCTCAGCGTTTTACGGTAT 4198
Query 4256 TTTCAACCTCTTCTCTGGTTTCTTCATTCCAAGACCCAAAATCCCAAAATGGTGGATTTG 4315
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 4199 TTTCAACCTCTTCTCTGGCTTCTTCATTCCAAGACCCAAAATCCCAAAATGGTGGATTTG 4258
Query 4316 GTACTACTGGATCTGCCCTGTTGCATGGACCGTGTATGGATTGATAGTGTCGCAGTACGG 4375
||||||||||||||||||||| || |||||||||||||||||||| ||||| ||||||||
Sbjct 4259 GTACTACTGGATCTGCCCTGTCGCTTGGACCGTGTATGGATTGATCGTGTCACAGTACGG 4318
Query 4376 TGATGTGGAGACACGTATCCAAGTCCTTGGTGGTGCTCCTGACTTAACCGTCAAGCAATA 4435
|||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct 4319 TGATGTTGAGACACGTATCCAAGTCCTTGGTGGTGCTTCTGACTTAACCGTTAAGCAATA 4378
Query 4436 CATTGAGGACCATTATGGTTTCCAATCTGACTTTATGGGACCAGTGGCGGCTGTACTCAT 4495
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 4379 CATTGAGGACCATTATGGTTTCCAATCTGACTTTATGGGACCAGTCGCGGCTGTACTCAT 4438
Query 4496 CGCTTTCACCGTCTTCTTCGCCTTCATCTTCGCCTTCTGCATCAGAACTCTCAACTTCCA 4555
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 4439 CGCTTTCACCGTCTTCTTCGCCTTCATCTTCGCATTCTGCATCAGAACTCTCAACTTCCA 4498
Query 4556 GACCAGATAAAACCATCTCTCAAACAACAAAGTCTCTTTCtttttt-tGT--AT-CCTCT 4611
||||||||||||||||||||||||||| | ||||||||||||||| | | || |||||
Sbjct 4499 GACCAGATAAAACCATCTCTCAAACAA-A--GTCTCTTTCTTTTTTGTATCCATTCCTCT 4555
Query 4612 GTGTTGTTTATAT 4624
|||||||||||||
Sbjct 4556 GTGTTGTTTATAT 4568
Score = 124 bits (67), Expect = 5e-27
Identities = 82/89 (92%), Gaps = 1/89 (1%)
Strand=Plus/Plus
Query 17 CTCctctctctcttctctGTATCACCCAACTAAA-TCCTCACGGGATTAGATCCAAAGTC 75
||||||||||||||||||||||| |||||||||| | ||||| ||||||||||||||||
Sbjct 1 CTCCTCTCTCTCTTCTCTGTATCTCCCAACTAAAATACTCACAAGATTAGATCCAAAGTC 60
Query 76 TCAAACTTTGATCCAAAAACACAAACTTT 104
|||||||||||| |||| |||||||||||
Sbjct 61 TCAAACTTTGATACAAAGACACAAACTTT 89
Score = 89.8 bits (48), Expect = 2e-16
Identities = 60/65 (92%), Gaps = 4/65 (6%)
Strand=Plus/Plus
Query 4684 AATATTTTTATTTATTGTCTTATAGATGATGACGAATCGGAATCATGTAATATAATTCCA 4743
|||||||||||||||||||||||||||||||||||||| || | ||||||||||||||
Sbjct 4594 AATATTTTTATTTATTGTCTTATAGATGATGACGAATCAGA-T---GTAATATAATTCCA 4649
Query 4744 Ctttt 4748
|||||
Sbjct 4650 CTTTT 4654
> Ahg471713 jgi|Araly1|471713|fgenesh2_kg.1__1667__AT1G15210.1
Length=4498
Score = 1888 bits (1022), Expect = 0.0
Identities = 1960/2408 (81%), Gaps = 83/2408 (3%)
Strand=Plus/Plus
Query 215 CATAAGTCGAAGTGTAAGCAGAGCAAGTAGGAACATTGAAGATATCTTCTCAT-CTGGTT 273
||||||||| |||||||||| |||||| || ||||| ||||| || ||| || | | |
Sbjct 54 CATAAGTCGTAGTGTAAGCAAAGCAAGCAGAAACATGGAAGACATATTC-AATACAAGCT 112
Query 274 CAAGAAGAA-CACAATCAGTCAACGACGATGAAGAAGCTCTTAAATGGGCTGCCATTGAG 332
| ||| ||| || |||| |||||||| || ||||||||||| |||||||||||||| |||
Sbjct 113 CTAGACGAACCA-AATCCGTCAACGAAGACGAAGAAGCTCTCAAATGGGCTGCCATCGAG 171
Query 333 AAGCTACCAACTTACAGTCGTCTCCGAACCACTCTCATGAACG--CTGTAGTCGAAGACG 390
|| || || || ||||| |||||||| |||| ||||||| || || | | ||||||||
Sbjct 172 AAACTCCCTACCTACAGCCGTCTCCGCACCAGTCTCATGCCCGAACT-T-GGCGAAGACG 229
Query 391 ATGTTTACGGTAACCAGCTCATGAGCAAGGAGGTTGATGTAACCAAGCTTGATGGTGAAG 450
| || ||||||||||| || | | ||| || ||||| || || ||||| || || ||||
Sbjct 230 ACGTCTACGGTAACCAAATCCTCAACAAAGAAGTTGACGTCACGAAGCTCGACGGCGAAG 289
Query 451 ATCGTCAGAAGTTTATTGACATGGTTTTCAAAGTAGCTGAGCAAGATAATGAAAGGATCT 510
| ||||||||||| || |||||||| |||||||| || ||||| || || ||| ||||||
Sbjct 290 AACGTCAGAAGTTCATCGACATGGTCTTCAAAGTCGCCGAGCAGGACAACGAACGGATCT 349
Query 511 TGACTAAGCTAAGAAACAGGATCGATAGAGTTGGTATCAAACTTCCAACTGTTGAAGTCA 570
| || || || || ||||| ||||| |||||||| ||| ||||||| || || ||||| |
Sbjct 350 TAACCAAACTGAGGAACAGAATCGACAGAGTTGGGATCCAACTTCCGACAGTGGAAGTGA 409
Query 571 GGTACGAGCATTTGAC-GATTAAAGCTGATTGTTACACTGGTAATAGATCTCTTCCTACA 629
||||||| || ||||| | | |||||||| |||||||| ||| ||||||| |||||| |
Sbjct 410 GGTACGACCACTTGACTG-TGAAAGCTGACTGTTACACCGGTGATAGATCACTTCCTTCG 468
Query 630 CTT-TTGAATGTTGTGAGGAACATGGGAG-AGTCTGCTTTAGGTATGATTGGTATTCA-A 686
||| || || | |||||||||||||||| || ||||| |||| ||||| || ||| |
Sbjct 469 CTTCTT-AACGCCGTGAGGAACATGGGAGAAG-CTGCTCTAGGCATGATCGGAATT-AGG 525
Query 687 TTTGCTAAGAAAGCTCAGCTTACGATTCTTAAAGATATCTCTGGGGTTA-TTAAACCTGG 745
|||| || ||||||||||| || ||||| |||||| | || ||| || | ||||||
Sbjct 526 CTTGCCAAAAAAGCTCAGCTCACTATTCTCAAAGATGTTTC-AGGGATAGTCAAACCTTC 584
Query 746 AAGGATGACACTTTTGTTGGGTCCTCCTTCTTCTGGTAAGACCACTCTTTTGTTGGCT-T 804
||||||||||||||||||||||||||| ||||| || |||||||| |||||||||||| |
Sbjct 585 AAGGATGACACTTTTGTTGGGTCCTCCCTCTTCGGGGAAGACCACACTTTTGTTGGCTCT 644
Query 805 TAGCTGGGAAACTTGATAAATCTCTACAAGTCAGTGGTGATATTACTTACAATGGTTACC 864
| || || ||||| || || ||||| | ||| ||| || | || || ||||||||||
Sbjct 645 T-GCCGGTAAACTCGACAAGTCTCTTGACGTCTCTGGGGAGGTAACCTATAATGGTTACC 703
Query 865 AACTCGATGAGTTTGTTCCGA-GAAAGACCTCTGCTTACATTAGTCAGAACGATCTTCAT 923
||| | ||||||||||| | ||| |||||||||||||||||||||||||||||||||
Sbjct 704 GCCTCAACGAGTTTGTTCCCATCAAA-ACCTCTGCTTACATTAGTCAGAACGATCTTCAT 762
Query 924 GTTGGTATCATGACTGTTAAGGAGACTCTTGACTTCTCTGCTAGGTGTCAAGGTGTTGGT 983
|||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct 763 GTTGGTATCATGACTGTTAAGGAGACTCTTGATTTCTCTGCTAGGTGTCAAGGCGTTGGT 822
Query 984 ACTCGTTATGATCTGTTGAATGAGCTTG-CGAGGAGAGAAAAGGACGCTGGTATATTCCC 1042
|| ||||| ||||| ||||||||| ||| | || |||||||| |||||||| || |||||
Sbjct 823 ACCCGTTACGATCTTTTGAATGAG-TTGGCAAGAAGAGAAAAAGACGCTGGGATTTTCCC 881
Query 1043 GGAAGCCGATGTTGATCTCTTCATGAAAGCTTCTGCTGCTCAAGGTGTTAAGAACAGTCT 1102
|||||| ||||||||| | |||||||| || ||||||||||||||||| |||| |||||
Sbjct 882 GGAAGCTGATGTTGATTTGTTCATGAAGGCCTCTGCTGCTCAAGGTGTCAAGAGTAGTCT 941
Query 1103 CGTCACTGATTATACTCTCAAAATTTTGGGGCTTGACATTTGCAAAGACACAATAGTTGG 1162
| ||||||||||||||||||||||| | ||||||||||||||||| ||||| ||||| ||
Sbjct 942 CATCACTGATTATACTCTCAAAATTCTAGGGCTTGACATTTGCAAGGACACTATAGTAGG 1001
Query 1163 AGATGACATGATGAGAGGTATATCTGGAGGTCAGAAGAAACGTGTCACAACTGGTGAGAT 1222
||||||||||||||||||||| || |||||||||||||| ||||| |||||||| |||||
Sbjct 1002 AGATGACATGATGAGAGGTATTTCAGGAGGTCAGAAGAAGCGTGTGACAACTGGGGAGAT 1061
Query 1223 GATTGTTGGACCTACTAAGACACTCTTCATGGACGAAATATCCACTGGTCTTGACAGTTC 1282
||| ||||||||||||||||| || |||||||| || ||||||||||| |||||||| ||
Sbjct 1062 GATCGTTGGACCTACTAAGACTCTGTTCATGGATGAGATATCCACTGGGCTTGACAGCTC 1121
Query 1283 CACTACTTTCCAAATCGTCAAGTGTCTGCAACAAATCGTTCACCTCA-ATGAAGCCACGG 1341
||| || ||||||||||| || ||| ||||||| || |||||||||| | |||||||| |
Sbjct 1122 CACGACCTTCCAAATCGTGAAATGTTTGCAACAGATTGTTCACCTCACA-GAAGCCACTG 1180
Query 1342 TGCTCATGTCTCTCCTCCAGCCTGCTCCTGAGACTTTTGATTTATTCGATGATATCATC- 1400
||||||| ||||| |||||||||||||||||||| |||||| |||||||||| || |||
Sbjct 1181 TGCTCATATCTCTTCTCCAGCCTGCTCCTGAGACGTTTGATCTATTCGATGACATAATCC 1240
Query 1401 TTGGTGTCGGAAGGTCAGATCGTGTACCAAGGACCGAGAGACAACATTCTTGAGTTCTTT 1460
|| |||| || || ||||| |||||||| ||||| |||||| ||||||| |||||||||
Sbjct 1241 TTT-TGTCAGAGGGACAGATTGTGTACCAGGGACCTAGAGACCACATTCTAGAGTTCTTT 1299
Query 1461 GAGAGCTTTGGGTTCAAGTGTCCTGAGAGAAAAGGAACAGCTGATTTCCTGCAAGAGGTT 1520
|||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct 1300 GAGAGCTTTGGGTTCAAGTGCCCTGAGAGAAAAGGAACAGCTGATTTCTTGCAAGAGGTT 1359
Query 1521 ACTTCCAAGAAAGATCAAGAACAGTACTGGGT-GAACCCGAACAGACCTTATC-ACTACA 1578
|||||||||||||||||||| ||||| ||||| || || |||||||| ||| | ||||
Sbjct 1360 ACTTCCAAGAAAGATCAAGAGCAGTATTGGGTTGATCCA-AACAGACCATATAGA-TACA 1417
Query 1579 TTCCGGTTTCAGAGTTTGCCAGTAGATACAAGAGTTTCCATGTTGGGACG-AAGA-TGTC 1636
|||| || || ||||||||||| || | ||||| |||||||| |||| | || | | ||
Sbjct 1418 TTCCAGTGTCGGAGTTTGCCAGCAGCTTCAAGACATTCCATGT-GGGAAGTAA-ACTATC 1475
Query 1637 TAACGAACT-TGCAGTACCGTTCGATAAGTCTCGCGGCCACAAAGCAGCTCTTGTGTTCG 1695
|||||| || | ||||||| ||||| |||||| |||||||||||||||| |||| |
Sbjct 1476 TAACGAGCTAT-CAGTACCATTCGACAAGTCTAAAAGCCACAAAGCAGCTCTAATGTTTG 1534
Query 1696 ATAAGTACTCTGTCTC-AAAGAGGGAGCTTCTCAAGAGCTGTTGGGACAAAGAGTGGCTG 1754
| || ||||| || ||| | ||||||||||| ||||||||||||||||| ||| ||
Sbjct 1535 ACAAATACTCAATCAAGAAA-ACAGAGCTTCTCAAAAGCTGTTGGGACAAAGAATGGATG 1593
Query 1755 CTTATGCAGCGAAACGCGTTCTTCTATGTTTTCAAGACTGTCCAGATCGTCATCATTGCT 1814
|| ||| |||||||| | ||||||||||| ||||| || ||||| ||| ||||||| ||
Sbjct 1594 CTCATGAAGCGAAACTCCTTCTTCTATGTCTTCAAAACCGTCCAAATCATCATCATAGCC 1653
Query 1815 GCAATCACGTCTACACTCTT-CCTGAGAACCGAAATGAACACAAGAAACGAGGGTGATGC 1873
||||| ||||| || || || ||| ||||| |||||| ||||||| |||||| ||| ||
Sbjct 1654 GCAATTACGTCAACCCT-TTACCTTAGAACTGAAATGCACACAAGGAACGAGATTGACGC 1712
Query 1874 TAATC-TCTACATAGGAGCATTGCTATTTGGAATGATCATCAACATGTTTAATGGGT-TT 1931
|| | ||||| | ||| || ||||||| | |||||| |||||||||||||||| | ||
Sbjct 1713 CAA-CATCTACGTCGGATCACTGCTATTCGCAATGATTGTCAACATGTTTAATGG-TCTT 1770
Query 1932 GCGGAGATGGCTATGATGGTTTCA-AGACT-CCCTGTGTTCTACAAACAGAGGGATCTCT 1989
|||||||||||||||| | | || ||||| ||| ||||||||||| || |||||||| |
Sbjct 1771 GCGGAGATGGCTATGACGATC-CAGAGACTTCCC-GTGTTCTACAAGCAAAGGGATCTTT 1828
Query 1990 TGTTTTATCCATCC-TGGACCTTCTCACTTCCCACTTTCTTGCTTGGGATTCCAAGCTCA 2048
||||| ||||| || ||||| | | | ||||||||||||||||| |||||||||| |||
Sbjct 1829 TGTTTCATCCA-CCATGGACATACACGCTTCCCACTTTCTTGCTAGGGATTCCAATCTCC 1887
Query 2049 ATATTAGAATCGACGGCTTGGATGGTGGTGACTTATTACTCCATTGGTTTTGCACCTGAC 2108
|| || || || || || |||||||||||||| ||||||||||| || | |||||| ||
Sbjct 1888 ATCTTTGAGTCAACAGCATGGATGGTGGTGACATATTACTCCATAGGATATGCACCCGAT 1947
Query 2109 GCCAGCCGCTTCTTCAAGCAGTTTCTTC-TGGTGTTTCT-GATTCAACAAATGGCTGCAT 2166
|| |||| |||||||| ||||| ||| | | ||||| ||| |||||||||||||| |
Sbjct 1948 GCGGGCCGGTTCTTCAAACAGTT-CTTGATTAT-TTTCTTGATCCAACAAATGGCTGC-T 2004
Query 2167 CCC-TCTTTAGGTTGATTGCTTCTGTGTGCAGAACCATGATGATTGCTAATACTGGTGGT 2225
| || ||||| ||||| ||| || ||||| |||| || || ||||| || |||
Sbjct 2005 GGGATATTCAGGTTCATTGCATCTACATGTAGAACTATGACCATAGCCAATACCGGCGGT 2064
Query 2226 GCT-CTCACTCTACTTCTTGTGTTCTTG-CTCGGAGGCTTCCTTCTTCCGAAAGGCAAGA 2283
| | || |||||| | ||||||||| | ||||| ||||||||||| | ||| |||
Sbjct 2065 G-TACTGGTTCTACTAGTCGTGTTCTTGACA-GGAGGTTTCCTTCTTCCTAGAGGTGAGA 2122
Query 2284 TTCCTGACTGGTGGGGTTGGGCTTACTGGGTATCTCCTCTCACCTATGCTTTCAACGG-- 2341
|||| | |||||| | |||||||| |||||||| ||||| | || |||||||| |
Sbjct 2123 TTCCGGTTTGGTGGAGATGGGCTTATTGGGTATCCCCTCTTTCTTACGCTTTCAATGCCA 2182
Query 2342 TCTAGTAGTCAATGAAATGTTTGCTCCCAGATGGATGAACAAAATGGCTTCTTCTAACAG 2401
|| | ||||||||| |||||||||| ||||||||||| |||||| || | | ||||
Sbjct 2183 TC-ACC-GTCAATGAATTGTTTGCTCCTAGATGGATGAATAAAATGTCTGC--C-AACAA 2237
Query 2402 CACAATAAAGCTTGG-AACTA-TGGTGCTTAATACTTGGGATGTCTACCATCAAAAGAAC 2459
| ||| | | |||| ||| | || ||||||||| ||||||||| | || | ||||||
Sbjct 2238 CGCAACGAGG-TTGGGAACAAGTG-TGCTTAATATTTGGGATGTATTTGATGATAAGAAC 2295
Query 2460 TGGTACTGGATTTCAGTTGGAGCCTTGCTTTGTTTCACAGCCCTCTTCAACA--TTCTAT 2517
||||||||||| |||||||| ||||||| |||| || | | |||||||| || | |
Sbjct 2296 TGGTACTGGATAGGAGTTGGAGGCTTGCTTGGTTTTACTGTCATCTTCAACGGCTTTT-T 2354
Query 2518 TCACCTTGGCACTTACCTATCTCA-ACCCTCTTGGGAAGA-AGGCAGGTT-TACTTCCAG 2574
| || ||||||||||| ||||| | |||| ||||||||| | || | | ||||||||
Sbjct 2355 T-ACATTGGCACTTACTTATCT-AGACCCCCTTGGGAAGGCA--CAAGCTATACTTCCAA 2410
Query 2575 AAGAAGAA 2582
||||||||
Sbjct 2411 AAGAAGAA 2418
Score = 1613 bits (873), Expect = 0.0
Identities = 1549/1874 (83%), Gaps = 52/1874 (3%)
Strand=Plus/Plus
Query 2718 AAGAAAGGAATGGTTCTTCCTTTCACTCCTTTAGCTATGTCCTTTGACGACGTCAAATAC 2777
|||||||| ||||||||||||||||||||| |||| ||||| |||||||| || ||||||
Sbjct 2491 AAGAAAGGGATGGTTCTTCCTTTCACTCCTCTAGCCATGTCATTTGACGATGTTAAATAC 2550
Query 2778 TTTGTTGACATGCCTGGGGAAATGAGAGACCAAGGAGTTAC-AGAAACAAGACTCCAACT 2836
|||||||||||||||| ||||||||| || ||||||||| | |||||| || || |||||
Sbjct 2551 TTTGTTGACATGCCTGCGGAAATGAGGGAGCAAGGAGTT-CAAGAAACCAGGCTGCAACT 2609
Query 2837 GCTTAAAGGTGTGACTGGTGCATTTAGGCCAGGAGTTTTGACTGCGCTT-ATGGGAGTGA 2895
|| ||||| ||||| | || |||||||||||||| ||||| ||| || ||||| || |
Sbjct 2610 TCTAAAAGGAGTGACAAGCGCGTTTAGGCCAGGAGTGTTGACGGCG-TTAATGGGGGTAA 2668
Query 2896 GTGGTGCCGGTAAGACTACGCTT-ATGGACGTTTTGGCCGGAAGGAAA-ACAGGTGGATA 2953
||||||| |||||||| || || ||||||||||||||||||| |||| || ||||||||
Sbjct 2669 GTGGTGCGGGTAAGACAAC-TTTGATGGACGTTTTGGCCGGAA-GAAAGACCGGTGGATA 2726
Query 2954 CATTGAAGGAGATGTGAGAATATCAGGATTCCCAAAGGTTCAAGAAACATTTGCTAGAAT 3013
||| ||||||||||| ||| |||| |||||||||||| ||||| ||||||||||||||
Sbjct 2727 CATAGAAGGAGATGTAAGAGTATCTGGATTCCCAAAGAAACAAGAGACATTTGCTAGAAT 2786
Query 3014 CTCAGGATATTGTGAGCAGACCGATATTCACTCCCCGCAAGTAACAGTCAGAGAATCTCT 3073
||| || || ||||| || || || |||||||| || ||||| ||||| |||||||| ||
Sbjct 2787 CTCTGGTTACTGTGAACAAACAGACATTCACTCTCCACAAGTTACAGTAAGAGAATCACT 2846
Query 3074 GATTTTCTCTGCTTTCCTTCGTCTTCCTAAAGAAGTCGGCAAAGATGAAAAAATGATGTT 3133
|| ||||||||||||||||| ||| |||| ||||| ||||||| || |||||||||||
Sbjct 2847 TATCTTCTCTGCTTTCCTTCGCCTTGCTAAGGAAGTAAGCAAAGAGGATAAAATGATGTT 2906
Query 3134 TGTGGATCAAGTGATGGAATTGGTAGAGCTGGAC-AGTCTTAGGGACTCCA-TTGTTGGT 3191
||||||||||||||||||||| || ||||||| | ||| || || | || ||||||||
Sbjct 2907 TGTGGATCAAGTGATGGAATTAGTGGAGCTGGTGGA-TCTGAGAGA-TGCAATTGTTGGT 2964
Query 3192 TTACCGGGTGTCACGGGGCTTTCCACGGAGCAGAGAAAGAGACTGACAATCGCGGTGGAG 3251
|| ||||| |||||||| |||||||| || |||||||||||| | |||||||| || |||
Sbjct 2965 TTGCCGGGGGTCACGGGTCTTTCCACCGAACAGAGAAAGAGATTAACAATCGCAGTTGAG 3024
Query 3252 CTTGTAGCCAACCCTTCCATCATCTTTATGGATGAGCCAACTTCAGGGCTAGACGCTAGA 3311
||||| || |||||||| |||||||| ||||| ||||||||||||||| | || ||||||
Sbjct 3025 CTTGTGGCTAACCCTTCAATCATCTTCATGGACGAGCCAACTTCAGGGTTGGATGCTAGA 3084
Query 3312 GCAGCGGCTATTGTGATGAGGGCGGTAAGGAACACAGTGGACACTGGAAGAACCGTGGTC 3371
||||| || ||||||||||| || || || |||||||||||||| || ||||| || ||
Sbjct 3085 GCAGCTGCGATTGTGATGAGAGCTGTGAGAAACACAGTGGACACAGGGAGAACTGTTGTG 3144
Query 3372 TGCACCATTCATCAGCCTAGCATTGATATCTTTGAAGCATTTGATGAATTGA-TGCTGAT 3430
|||||||| || || || ||||||||||||||||| || ||||| ||| | | | || ||
Sbjct 3145 TGCACCATCCACCAACCGAGCATTGATATCTTTGAGGCGTTTGACGAACT-ACTACTAAT 3203
Query 3431 GAAGAGAGGAGGACAAGTGATTTACGCGGGTCCATTGGGTCAAAACTCTCACAAGGTGGT 3490
||||||||||||||| ||||| ||| | ||||| || || | ||||||||||||||| ||
Sbjct 3204 GAAGAGAGGAGGACATGTGATCTACTCTGGTCCCTTAGGCCGAAACTCTCACAAGGTTGT 3263
Query 3491 TGAGTACTTTGAATCTTTCCCCGGAGTGTCCAA-GATTCCAGAAAAGTATAACCCGGCCA 3549
||||||||||||| | ||||| |||||| |||| |||||| ||||| || ||||||||||
Sbjct 3264 TGAGTACTTTGAAGCCTTCCCTGGAGTG-CCAAAGATTCCGGAAAAATACAACCCGGCCA 3322
Query 3550 CTTGGATGCTCGAAGCTAGCTCACTCGCCGCTGAGCTAAAGCTTAGTGTTGACTTTGCTG 3609
|||||||||| ||||| ||||| || || || ||| | |||||| | |||||||||||||
Sbjct 3323 CTTGGATGCTGGAAGCCAGCTCCCTTGCAGCCGAGTTGAAGCTTGGAGTTGACTTTGCTG 3382
Query 3610 AGTTATACAAT-CAATCAGCATTGCACCAGCGAAACAAAGCGTTGGTAAAAGAACTAAGT 3668
|| ||||||| | ||||| || |||||| ||||| ||| |||| |||||||||||
Sbjct 3383 AGCTATACAAGGCT-TCAGCCTTATGCCAGCGGAACAAGGCGCTGGTGCAAGAACTAAGT 3441
Query 3669 GTACCACCAGCA-GGAGC-ATCAGATCTTTACTTTGCTACACAATTCTCACAAAACACAT 3726
|| || || || || || | | ||||| |||||||| ||||| || ||||| |||||||
Sbjct 3442 GTGCCTCCC-CAAGGCGCGA-CTGATCTCTACTTTGCGACACAGTTTTCACAGAACACAT 3499
Query 3727 GGGGACAGTTCAAATCATG-CTTATGGAAACAATGGTGGACGTATTGGAGATCTCCAGAC 3785
||||||| ||||||||||| || |||||||||||||||||| ||||||||||||||||||
Sbjct 3500 GGGGACAATTCAAATCATGTCT-ATGGAAACAATGGTGGACTTATTGGAGATCTCCAGAC 3558
Query 3786 TACAATCTTGTCCGTTTCATCTTCACATTGGCAACATCTCTCTTGATTGG-TACAGTCTT 3844
||||| |||||||| |||||||||||||| |||||||||||| |||| || | | |||||
Sbjct 3559 TACAACCTTGTCCGGTTCATCTTCACATTAGCAACATCTCTCATGATCGGCT-CTGTCTT 3617
Query 3845 CTGGCAAATCGGAGGTAACAGGTCGAACGCAGGGGATCTAACAATGGTGATAGGAGC-AT 3903
|||||||||||||||||| || || |||| | || || ||||||||||| ||||| ||
Sbjct 3618 CTGGCAAATCGGAGGTAAGAGATCAAACGTACAAGACCTGACAATGGTGATCGGAGCTAT 3677
Query 3904 TGTATGCCGC-GATTATCTTCGTGGGAATCAACAACTGTTCAACAGTACAACCGATGGTT 3962
|| || || | || | ||||| || || |||||||| || ||||||||||| |||||
Sbjct 3678 C-TACGCAGCAG-TTGTATTCGTTGGTATAAACAACTGCTCGACAGTACAACCAATGGTG 3735
Query 3963 GCAGTGGAAAGAACAGTGTTCTACAGAGAAAGAGCAGCAGGAATGTACTCAGCCATGCCA 4022
||||||||| | ||||||||||||||||||| |||||| || ||||| ||||| || ||
Sbjct 3736 GCAGTGGAACGGACAGTGTTCTACAGAGAAAAAGCAGCTGGGATGTATTCAGCTATACCT 3795
Query 4023 TATGCCATCTCTCAAGTCACTTGTGAGCTTCCCTATGTCCTT-ATTCAAACCGTT-TACT 4080
||||| ||||| || || ||||||||||| || |||||| || ||||| || | ||||
Sbjct 3796 TATGCTATCTCCCAGGTGACTTGTGAGCTACCTTATGTC-TTGATTCAGAC-GACATACT 3853
Query 4081 ACTCACTCATCGTCTACGCCATGGTTGGTTTCGAATGGAAAGCCGAAAAGTTCTTCTGGT 4140
| || || ||| ||||| | |||||||| ||||| |||||||| |||||||| ||||
Sbjct 3854 ATTCTCTTATCATCTACTCTATGGTTGGATTCGAGTGGAAAGCTTCCAAGTTCTTGTGGT 3913
Query 4141 TCGTCTTCGTTAGCTACTTCTCATTCCTCTACTGGACTTACTACGGCATGATGACTGTTT 4200
|| ||||| | | |||||||| |||||||||||||| ||||||||||||||||| ||||
Sbjct 3914 TCATCTTCATCAATTACTTCTCCTTCCTCTACTGGACCTACTACGGCATGATGACAGTTT 3973
Query 4201 CCCTCACACCAAACCAACAAGTCGCTTCGAT-TTTCGCCTCAGCGTTTTACGGTAT-TTT 4258
||||||| || ||||||||||| ||||| || ||| || ||||| ||||| ||||| |||
Sbjct 3974 CCCTCACGCCTAACCAACAAGTTGCTTCTATCTTT-GCATCAGCCTTTTATGGTATCTTT 4032
Query 4259 CAACCTCTTCTCTGG-TTTCTTCATTCCAAGACCCAAAATCCCAAAATGGTGGATTTGGT 4317
|||||||||||||| ||| ||||| || ||||||||||| ||||| |||||| ||||||
Sbjct 4033 -AACCTCTTCTCTGGATTT-TTCATCCCTAGACCCAAAATTCCAAAGTGGTGGGTTTGGT 4090
Query 4318 ACTACTGGATCTGCCCTGTTGCATGGACCGTGTATGGATTGAT-AGTGTCGCAGTACGGT 4376
| || ||||||||||||||||| |||||| | || || ||||| | | || || ||||||
Sbjct 4091 ATTATTGGATCTGCCCTGTTGCTTGGACCATATACGGTTTGATCACT-TCTCAATACGGT 4149
Query 4377 GATGTGGAGACACGTATC-CAAGTCCTTGGTGGTGCTCCTGACTTAACCGTCAAGCAATA 4435
|| || ||||| | || | ||||||||||||| |||| | | || || || |||||
Sbjct 4150 GACGTTGAGACTCCCATTGCTC-TCCTTGGTGGTGCACCTGGCCTCACTGTGAAACAATA 4208
Query 4436 CATTGAGGACCATTATGGTTTCCAATCTGACTTTATGGGACCAGTGGC-GGCTGTACTCA 4494
|||| | || || || ||||| |||| ||||| |||||||| || || || ||||| |
Sbjct 4209 CATTAAAGATCAATACGGTTTTGAATCAGACTTCATGGGACCTGTAGCCGGA-GTACT-A 4266
Query 4495 -TCG-CTTTCACCGTCTTCTTCGCCTTCATCTTCGCCTTCTGCATCA-GAACTCTCAACT 4551
| | ||| ||| |||||||| |||||||||||||| || ||||||| || | |||||||
Sbjct 4267 GTTGGCTT-CACTGTCTTCTTTGCCTTCATCTTCGCATTTTGCATCAAGACC-CTCAACT 4324
Query 4552 TCCAGACCAGATAA 4565
||||||| ||||||
Sbjct 4325 TCCAGACTAGATAA 4338
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 180088435436
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5