BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G60540.1
Length=2031
Score E
Sequences producing significant alignments: (Bits) Value
Ahg338322 jgi|Araly1|338322|fgenesh1_pg.C_scaffold_2000421 1722 0.0
Ahg475281 jgi|Araly1|475281|fgenesh2_kg.2__411__AT1G60500.1 1600 0.0
Ahg338327 jgi|Araly1|338327|fgenesh1_pg.C_scaffold_2000426 1447 0.0
Ahg338323 jgi|Araly1|338323|fgenesh1_pg.C_scaffold_2000422 1194 0.0
> Ahg338322 jgi|Araly1|338322|fgenesh1_pg.C_scaffold_2000421
Length=1905
Score = 1722 bits (932), Expect = 0.0
Identities = 1324/1514 (87%), Gaps = 23/1514 (2%)
Strand=Plus/Plus
Query 16 AAGCATGATGTCACTAGTA-CCACTCCTTCTCTGGCAATTGTCCAGGCGAATCCTCACCC 74
||||||| ||||||||| | || |||||||||| || ||||| ||| ||| |||||
Sbjct 16 AAGCATGTTGTCACTAG-AGCCTCTCCTTCTCTTGCTATTGTTGAGGTGAAGCCTCATGA 74
Query 75 CCACAAAGATGTTGTTCCCACAGAAGCACCAATTGTATCATCTTACAATGACCACATCAG 134
||||||||||| |||||| | |||||||| |||||||| ||||||||||| || |||||
Sbjct 75 CCACAAAGATGCTGTTCCTATTGAAGCACCGATTGTATCTTCTTACAATGATCAGATCAG 134
Query 135 GCCGTTGCTTGACACTGTGGACAAGCTCAGGAACTTGAATGTGATGCA-AGAAGGGATTC 193
||| |||||||||||||||||| ||| |||||| ||||||||||| | ||||||||| |
Sbjct 135 GCCACTGCTTGACACTGTGGACAGGCTAAGGAACCTGAATGTGATG-AGAGAAGGGATCC 193
Query 194 AGCTTCCTACCATTGTTGTGGTTGGAGACCAGTCCTCGGGGAAGTCGAGTGTCCTCGAGT 253
||||||| |||||||||||||||||||||||||| ||||||||||| ||||| || ||||
Sbjct 194 AGCTTCCCACCATTGTTGTGGTTGGAGACCAGTCGTCGGGGAAGTCAAGTGTTCTTGAGT 253
Query 254 CGTTGGCAGGAATCAGTTTGCCACGTGGGCAAGGAATCTGCACTAGAGTTCCTCTTGTCA 313
| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct 254 CCTTGGCAGGAATCAGTTTGCCTCGTGGGCAAGGAATCTGCACTAGGGTTCCTCTTGTCA 313
Query 314 TGAGGCTCCAGAGAAG-TCGAAGCCCTGAACCTGAGATCTGGCTGGAGTACGGTGACAAA 372
||||||||||| |||| || |||||||||||||| |||||||||||||| |||||||
Sbjct 314 TGAGGCTCCAGCGAAGCTC-TAGCCCTGAACCTGAAATCTGGCTGGAGTATAATGACAAA 372
Query 373 ATTGTTCCTACAGATGAGGAACACATTGCTCAA-ACTATTTGTGCA-GCTACAGACGTGA 430
|||||| || |||||||||||||| ||| || |||| |||| | || || || ||||
Sbjct 373 GTTGTTCAGACGGATGAGGAACACATAGCT-AATGCTATATGTG-ATGCGACTGATGTGA 430
Query 431 TAGCTGGATCTGGCAAAGGGGTTTCAGACACACCCCTTACGCTCCATGTGAAGAAGGCTG 490
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 431 TTGCTGGATCTGGCAAAGGGGTTTCAGACACACCCCTTACGCTCCATGTGAAGAAGGCTG 490
Query 491 GTGTTCCAGATATTACTATGGTTGATCTCCCTGGAATAACCCGTGTTCCTGTGAACGGAC 550
|||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||
Sbjct 491 GTGTTCCAGATATTACCATGGTTGATCTCCCTGGGATAACCCGGGTTCCTGTGAACGGAC 550
Query 551 AGCCTGAAAATATTTATGAACAGATTTCCAGGATGGTTATGAAGTATATTGAGCCACAAG 610
|||||||||| || ||||||||||||||| |||||||||||||||| || |||||||| |
Sbjct 551 AGCCTGAAAACATCTATGAACAGATTTCCGGGATGGTTATGAAGTACATCGAGCCACAGG 610
Query 611 AATCAATCATACTCAATGTTCTGTCAGCGACAGTTGATTTCACTACTTGTGAATCCAT-C 669
|||| ||||| ||||||||||||||||| ||||||||||| || |||||||| ||||| |
Sbjct 611 AATCCATCATCCTCAATGTTCTGTCAGCCACAGTTGATTTTACAACTTGTGAGTCCATAC 670
Query 670 AGAATGTCTAAACAGGTGGACAAAACCGGTGAGCGGACTCTGGCTGTAGTCACAAAGGCT 729
| |||||||| || || || ||||| || || || ||||||||||| ||||| |||||
Sbjct 671 -GTATGTCTAAGCAAGTTGATAAAACAGGCGAACGAACTCTGGCTGTTGTCACCAAGGCA 729
Query 730 GACATGGCTCCTGAAGGGCTTCTCCAGAAAGTAACTGCAGATGATGTGAGTATCGGACTT 789
|||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||
Sbjct 730 GACATGGCTCCTGAAGGGCTCCTGCAGAAAGTAACTGCAGATGATGTGAGTATTGGACTT 789
Query 790 GGTTATGTCTGTGTTAGAAACCGGATAGGGGAGGAAACCTATGAAGAAGCTCGAATGCAA 849
|||||||||||||| |||||||| || || || || || |||||||||||||||||||||
Sbjct 790 GGTTATGTCTGTGTCAGAAACCGAATCGGAGAAGAGACGTATGAAGAAGCTCGAATGCAA 849
Query 850 GAAGAGTTACTTTTCAGGACCCACCCGATGCTTT-CAATGATCAATGATGAGATTGTGGG 908
|||||||||||||| |||| || || ||||| | ||||| ||||||| ||||||||
Sbjct 850 GAAGAGTTACTTTTTAGGAATCATCCAATGCTAAGCT-TGATCGATGATGACATTGTGGG 908
Query 909 TATCCCCGTCTTAGCTCAGAAGCTGACGCAGATCCAGGGAATGATGATATCTAGGTGTTT 968
||||| || |||||||| ||| |||||||||||||||||||||||||||| | |||||
Sbjct 909 CATCCCTGTATTAGCTCACAAGTTGACGCAGATCCAGGGAATGATGATATCCCGATGTTT 968
Query 969 GCCGGAAATCGAAAGGAAGATAAATGTGAAGATGGAAATCAGTGTCCTGGAGTTTAACAA 1028
||| |||||||||||||| || || | ||| ||||| ||||||||||| |||||||| ||
Sbjct 969 GCCTGAAATCGAAAGGAAAATCAACGAGAAAATGGAGATCAGTGTCCTCGAGTTTAATAA 1028
Query 1029 GCTCCCAATAGTCATGGCTTCTACTGGGGAAGCATTAATGTCTCTAATGGATATCATTGG 1088
||| |||||||| |||||||| |||||||||||||| ||| ||||||||||| |||||||
Sbjct 1029 GCTTCCAATAGTGATGGCTTCAACTGGGGAAGCATTGATGGCTCTAATGGATGTCATTGG 1088
Query 1089 TTCTGCCAAGGAGTCTCTACT-AAGAATCCTTGTCCATGGAGATTTCTCTGAATACCCTA 1147
||| ||||| |||||||| || |||||| || ||||| ||||||||||||||||||||
Sbjct 1089 TTCCGCCAAAGAGTCTCT-CTTAAGAATTCTCGTCCAAGGAGATTTCTCTGAATACCCCG 1147
Query 1148 ACGATCAAAAGATGCATTGCACAGCTCGCTTGGCTGAAATGTTAAACCGATTCTCAGACA 1207
| |||||||| |||||||| || || ||||||||||||||||| ||| | |||||||| |
Sbjct 1148 ATGATCAAAACATGCATTGTACTGCCCGCTTGGCTGAAATGTTGAACGGGTTCTCAGATA 1207
Query 1208 ATCTGCAGGCACAGCCTCAAGCCG-TGACAGAAGAGTTCTTGATGGATGAAATCAAAGTC 1266
||||||| ||||| |||| | || | |||| | ||||||||||| ||||| ||| |
Sbjct 1208 ATCTGCAAGCACAATCTCAGGTCGCTT-CAGA-G--TTCTTGATGGACGAAATTAAAATT 1263
Query 1267 TTAGAAGAGCGCAAATGTATCGGATTGCCTAATTTTATACCAAGATCTTCTTTCTTAGCA 1326
||||||||| |||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct 1264 TTAGAAGAGTGCAAATGTATCGGATTGCCTAATTTTATCCCCAGATCTTCTTTCTTAGCT 1323
Query 1327 ATCCTTTCACAACATGTGGATGGGATACAAGACAAGCCAGTTGAGTTCATCAAGGAGATA 1386
||||||||||||||||||||||| || || | |||||| |||||||||||||| ||||||
Sbjct 1324 ATCCTTTCACAACATGTGGATGGAATTCATGCCAAGCCGGTTGAGTTCATCAAAGAGATA 1383
Query 1387 TGGGACTACATTGAAGTCGTTCTGTCATCAGTCATTACGACA-TATTCTGACAACTTTCC 1445
||||||||||||||||| ||||| || || |||||||| | | |||||||||||||||||
Sbjct 1384 TGGGACTACATTGAAGTTGTTCTCTCGTCTGTCATTACCA-AGTATTCTGACAACTTTCC 1442
Query 1446 CCAGATTCAATCCTCCATCAAAAGGGCTGGTCGTAATCTAATGAGCAGGACTAAGGAACG 1505
||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct 1443 ACAGATCCAATCCTCCATCAAAAGGGCTGGTTGTAATCTAATGAGCAAGACTAAGGAACG 1502
Query 1506 TTCCGTGAACTGAG 1519
||| |||||| |||
Sbjct 1503 TTCAGTGAACAGAG 1516
Score = 468 bits (253), Expect = 8e-131
Identities = 342/386 (89%), Gaps = 2/386 (1%)
Strand=Plus/Plus
Query 1645 AAACCTGA-GAATTTTGCTTTACCTGGATTCGGGGATGTGAAGATCTCGCATCTGCGAAA 1703
|||||||| | || | ||||| ||||||| ||| ||||||||||||||||||| ||| |
Sbjct 1519 AAACCTGACTACTTCT-CTTTAACTGGATTTGGGAATGTGAAGATCTCGCATCTACGACA 1577
Query 1704 GTATCACGCTCATTTGCTGCAACAAGCGTTTGATATGAAGATGAGGATCACATCTTACTG 1763
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1578 TTATCACGCTCATTTGCTGCAACAAGCGTTTGATATGAAGATGAGGATCACATCGTACTG 1637
Query 1764 GACGATCGTATTGCGAAGGGTTGTCGATAACCTTGCTCTCTACCTTCAATTCTCTGTGAA 1823
||| ||||| |||||||| |||| ||||| |||||||| | ||||| || ||||||||
Sbjct 1638 GACAATCGTCCTGCGAAGGATTGTGGATAATCTTGCTCTGTTTCTTCAGTTTTCTGTGAA 1697
Query 1824 GAATCTGGTCAACAGTCAGTTTCAGAAGGAGATTGTGGCGGAGATGGTGGATCCAAGAGC 1883
|||||||||||| |||||||||||||||||||| || ||||| ||||||||| |||||||
Sbjct 1698 GAATCTGGTCAATAGTCAGTTTCAGAAGGAGATAGTTGCGGAAATGGTGGATACAAGAGC 1757
Query 1884 TGGCGGAGGAATAGATAGGATGCTGGAGGAATCACCGTCGGTGGCGAGCAAGAGGGAGAA 1943
|||||||||||| || |||||||||||||| || |||| ||| |||||||||||||||||
Sbjct 1758 TGGCGGAGGAATTGAGAGGATGCTGGAGGAGTCTCCGTTGGTTGCGAGCAAGAGGGAGAA 1817
Query 1944 GCTGAAGAATAGTCTCAAGCTTCTGAAGGAATCCAAGGACGTTGTGGCGGCCATTGTTGA 2003
||||||||| ||| |||||||||||||||| |||||||||||||||||||| || |||||
Sbjct 1818 GCTGAAGAACAGTATCAAGCTTCTGAAGGAGTCCAAGGACGTTGTGGCGGCGATCGTTGA 1877
Query 2004 TCAGAACTCTGTATACGCTGATCGTT 2029
|||||| |||| |||| |||||||
Sbjct 1878 TCAGAATTCTGGGTACGGAGATCGTT 1903
> Ahg475281 jgi|Araly1|475281|fgenesh2_kg.2__411__AT1G60500.1
Length=2122
Score = 1600 bits (866), Expect = 0.0
Identities = 1606/1961 (82%), Gaps = 59/1961 (3%)
Strand=Plus/Plus
Query 77 ACAAAGATGTTGTTCCCACAGAAGCACCAATTGTATCATCTTACAATGACCACATCAGGC 136
|||||||||||||||| |||||||| |||||||| || || ||||| || |||||||
Sbjct 80 ACAAAGATGTTGTTCCTGTTGAAGCACCGATTGTATCTTCGTATAATGATCAAATCAGGC 139
Query 137 CGTTGCTTGACACTGTGGACAAGCTCAGGAACTTGAATGTGATGCA-AGAAGGGATTCAG 195
||||||||||||||||||||| | | |||||| | ||||||||| | ||||||||| ||
Sbjct 140 CGTTGCTTGACACTGTGGACAGGTTAAGGAACCTCAATGTGATG-AGAGAAGGGATCCAT 198
Query 196 CTTCCTACCATTGTTGTGGTTGGAGACCAGTCCTCGGGGAAGTCGAGTGTCCTCGAGTCG 255
||||| |||||||| ||||||||||||||||| ||||| ||||| ||||| || || ||
Sbjct 199 CTTCCCACCATTGTCGTGGTTGGAGACCAGTCGTCGGGAAAGTCAAGTGTTCTTGAATCC 258
Query 256 TTGGCAGGAATCAGTTTGCCACGTGGGCAAGGAATCTGCACTAGAGTTCCTCTTGTCATG 315
|||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct 259 TTGGCAGGAATCAGTTTGCCTCGTGGGCAAGGAATCTGCACTAGGGTTCCTCTTGTCATG 318
Query 316 AGGCTCCAGAGAAG-TCGAAGCCCTGAACCTGAGATCTGGCTGGAGTACGGTGACAAAAT 374
||||| ||| |||| || ||||||||||||||||||||||| ||||| | |||||| |
Sbjct 319 AGGCTTCAGCGAAGCTC-TAGCCCTGAACCTGAGATCTGGCTTGAGTATAGCGACAAAGT 377
Query 375 TGTTCCTACAGATGAGGAACACATTGCTCAAACTATTTGTGCAGCTACAGACGTGATAGC 434
|||||||| || ||||||||||| ||| || ||||| |||| || ||||| ||||| ||
Sbjct 378 GGTTCCTACGGACGAGGAACACATCGCTGAAGCTATTCGTGCTGCGACAGATGTGATTGC 437
Query 435 TGGATCTGGCAAAGGGGTTTCAGACACACCCCTT-ACGCTCCATGTGAAGAAGGCTGGTG 493
||||||||| |||||||| |||||| | ||||| || ||||||||||||||||||||||
Sbjct 438 TGGATCTGGTAAAGGGGTCTCAGACGC-TCCCTTGACCCTCCATGTGAAGAAGGCTGGTG 496
Query 494 TTCCAGATATTACTATGGTTGATCT-CCCTGGAATAACCCGTGTTCCTGTGAACGGACAG 552
|||||||| |||| ||||| ||||| ||| || ||||| || ||||| || || || ||
Sbjct 497 TTCCAGATCTTACAATGGTCGATCTTCCC-GGTATAACTCGAGTTCCGGTCAATGGTCAA 555
Query 553 CCTGAAAATATTTATGAACAGATTTCCAGGATGGTTATGAAGTATATTGAGCCACAAGAA 612
|| |||||||||||||| ||||| || ||||| ||||| |||| |||||||| ||||||
Sbjct 556 CCGGAAAATATTTATGAGCAGATCTCTGGGATGATTATGGAGTACATTGAGCCTCAAGAA 615
Query 613 TCAATCATACTCAATGTTCTGTCAGCGACAGTTGATTTCACTACTTGTGAATCCAT-CAG 671
||||| || ||||| ||||| ||||| || || || ||||| || || |||||||| | |
Sbjct 616 TCAATAATCCTCAACGTTCTTTCAGCTACGGTCGACTTCACAACCTGCGAATCCATTC-G 674
Query 672 AATGTCTAAACAGGTGGACAAAACCGGTGAGCGGACTCTGGCTGTAGTCACAAAGGCTGA 731
||||||||| | ||||||||||||||| | || ||||||||||| || |||||||||||
Sbjct 675 CATGTCTAAAAAAGTGGACAAAACCGGTCAACGTACTCTGGCTGTTGTGACAAAGGCTGA 734
Query 732 CATGGCTCCTGAAGGGCTTCTCCAGAAAGTAACTGCAGATGATGTGAGTATCGGACTTGG 791
||||||||||||||| ||| | ||||||||||| ||||||||||||||||| | ||||||
Sbjct 735 CATGGCTCCTGAAGGTCTTTTGCAGAAAGTAACAGCAGATGATGTGAGTATTGTACTTGG 794
Query 792 TTATGTCTGTGTTAGAAACCGGATAGGGGAGGAAACCTATGAAGAAGCTCGAATGCAAGA 851
|||||| || || |||||||| || || || || || |||||||||||| | ||||| ||
Sbjct 795 TTATGTGTGCGTCAGAAACCGCATTGGAGAAGAGACATATGAAGAAGCTAGGATGCATGA 854
Query 852 AGAGTTACTTTTCAGGACCCACCCGAT-GCTTT-CAATGATCAATGATGAGATTGTGGGT 909
||| |||||||||| ||| || || || ||| | |||| |||| || || |||||
Sbjct 855 AGAATTACTTTTCAAGACTCATCC-ATTGCTAAGCT-TGATTGATGAAGACATCGTGGGA 912
Query 910 ATCCCCGTCTTAGCTCAGAAGCTGACGCAGATCCAGGGAATG-ATGATAT-CTAGGTGTT 967
| ||| || |||||||||||||| | || ||||| | || | ||||| | | || ||||
Sbjct 913 AACCCTGTGTTAGCTCAGAAGCTAATGCTTATCCAAGCAA-GCATGAT-TGCCAGATGTT 970
Query 968 TGCCGGAA-ATCGAAAGGAAGATAAATGTGAAGAT-GGAAATCAG-TGTCCTGGAGTTTA 1024
|||| || || | | | ||||| || ||| || ||| | | | ||| || ||||| |
Sbjct 971 TGCCT-AATATTGTACGCAAGATCAACCAGAA-ATTGGACACC-GCTGTTCTTGAGTTAA 1027
Query 1025 ACAAGCTCCCAATAGTCATGGCTTCTACTGGGGAAGCATTAATGTC-TCTAATGGATATC 1083
||||||| ||||| || ||||||||||| ||||||||||||||| | | | ||| ||||
Sbjct 1028 ACAAGCTACCAATGGTAATGGCTTCTACAGGGGAAGCATTAATGGCGT-TGATGAATATT 1086
Query 1084 ATTGGTTCTGCCAAGGAGTCTCTACTAAGAATCCTTGTCCATGGAGATTTCTCTGAATAC 1143
||||||||||| || || |||||| | ||||| |||||||| ||||| ||||||||||||
Sbjct 1087 ATTGGTTCTGCTAAAGAATCTCTATTGAGAATTCTTGTCCAAGGAGACTTCTCTGAATAC 1146
Query 1144 CCTAACGATCAAAAGATGCATTGCACAGCTCGCTTGGCTGAAATGTTAAACCGATTCTCA 1203
|| | |||||||| |||||||| || ||||| |||||||| ||||||| | ||||||
Sbjct 1147 CCGGATGATCAAAACATGCATTGTACTGCTCGTTTGGCTGATATGTTAAGTCAATTCTCT 1206
Query 1204 GACAATCTGCAGGCACAGCCTCAAGCC-GTGACAGAAGAGTTCTTGATGGATGAAATCAA 1262
|| ||||||| ||| |||| ||| ||||| || | |||||||||||||| |||||
Sbjct 1207 GATGATCTGCAAGCAAAGCCA-AAGGATGTGACTGA-G--TTCTTGATGGATGAGATCAA 1262
Query 1263 -AGTCTTAGAAGAGCGCAAATGTATCGGATTGCCTAATTTTATACCAAGATCTTCTTTCT 1321
| |||| || || |||||||| | ||| |||||||||| || || ||||| | ||||
Sbjct 1263 GATTCTT-GATGAATGCAAATGTGTTGGACTGCCTAATTTCATCCCTAGATCAGCCTTCT 1321
Query 1322 TAGCAATCCTTTCACAACATGTGGATGGGATACAAGACAAGCCAGTTGAGTTCATCAAGG 1381
| || || |||||||||||||| |||| ||||| |||||||||||||| ||||||||
Sbjct 1322 TTGCTATTCTTTCACAACATGTTGATGAAATACATGACAAGCCAGTTGAATTCATCAACA 1381
Query 1382 AGATATGGGACTACATTGAAGTCGTTCTGTCATCAGTCATTACGACAT-ATTCTGACAAC 1440
|||||||||||||||||||||| ||||| |||||||||||| | | | ||||||||||
Sbjct 1382 AGATATGGGACTACATTGAAGTTGTTCTCTCATCAGTCATTTCTA-AGCATTCTGACAA- 1439
Query 1441 TTTCCC-CAGATTCAATCCTCCATCAAAAGGGCTGGTCGTAATCTAATGAGC-AGGA-CT 1497
|||||| ||||||||||| ||||||||| | || ||||| |||||||| | | | || |
Sbjct 1440 TTTCCCACAGATTCAATCTTCCATCAAACGAGCCGGTCGCAATCTAAT-ATCCAAGATCA 1498
Query 1498 AAGGAACGTTCCGTGAA-CTGAGTAATTGAGATCGTTGAGATGGAGAAGCTTACCGATTA 1556
||| ||| || ||||| | |||| || ||||| ||||||||||||||||| || |||||
Sbjct 1499 AAG-AACAATCTGTGAATC-GAGTGATGGAGATAGTTGAGATGGAGAAGCTGACGGATTA 1556
Query 1557 CACATGTAACCCAGATTACATGACTTCTTGGACTCAGAAGACAACCTCACAGCAA-A-A- 1613
|||||||| ||| || || ||||| ||||||||||||||||| | | | ||| | |
Sbjct 1557 CACATGTAGCCCTGAGTATATGACGTCTTGGACTCAGAAGACTGG-TGA-A-CAAGAGAG 1613
Query 1614 CTTCATCAATTCTGTGTTGCACGATGAGAATAAACCTGAGAATTT-TGCTTT-ACCTGGA 1671
|||||| || ||| ||| | ||| ||| |||||||| | || | || | | ||||
Sbjct 1614 CTTCATGTATGATGTTTTGAAAAATGGGAACAAACCTGACTACTTCT-CTATGAG-TGGA 1671
Query 1672 TTCGGGGATGTGAAGATCTCGCATCTGCGAAAGTATCACGCTCATTTGCTGCAA-CAAGC 1730
|| ||| ||||||||||||||||||| |||||||||||||||||||| ||| | | ||
Sbjct 1672 TTTGGGAATGTGAAGATCTCGCATCTACGAAAGTATCACGCTCATTTACTG-ATTCCGGC 1730
Query 1731 GTTT-GATATGAAGATGAGGATCACATCTTACTGGACGATCGTATTGCGAAGGGTTGTCG 1789
||| || |||||||| || |||||||| ||||||| ||||| | || || |||| |
Sbjct 1731 -TTTCGACATGAAGATAAGAATCACATCCTACTGGAATATCGTCCTACGGAGAATTGTAG 1789
Query 1790 ATAACCTTGCTCTCTACCTTCAATTCTCTGTGAAGAATCTGGTCAACAGTCAGTTTCAGA 1849
||||||||||||| || ||||| | ||||||||| ||| || ||| |||| |||||||
Sbjct 1790 ATAACCTTGCTCTGTATCTTCAGCTATCTGTGAAGTCTCTCGTAAACTGTCAATTTCAGA 1849
Query 1850 AGGAGATTGTGGCGGAGATGGTGGATCCAAGAGCTGGCGGAGGAATAGATAGGATGCTGG 1909
||||||||||||||||||||||||||||||||| |||||||||| | || | |||| |||
Sbjct 1850 AGGAGATTGTGGCGGAGATGGTGGATCCAAGAGATGGCGGAGGAGTTGAAAAGATGTTGG 1909
Query 1910 AGGAATCACCGTCGGTGGCGAGCAAGAGGGAGAAGCTGAAGAATAGTCTCAAGCTTCT-G 1968
||||||| |||||||||||||| |||||||||||||||||||||||| ||||||| || |
Sbjct 1910 AGGAATCTCCGTCGGTGGCGAGTAAGAGGGAGAAGCTGAAGAATAGTATCAAGCT-CTTG 1968
Query 1969 AAGGAATCCAAGGACGTTGTGGCGGCCATTGTTGATCAGAA 2009
||||| |||||||| | |||||| |||||||||||||||||
Sbjct 1969 AAGGAGTCCAAGGATGCTGTGGCCGCCATTGTTGATCAGAA 2009
> Ahg338327 jgi|Araly1|338327|fgenesh1_pg.C_scaffold_2000426
Length=1980
Score = 1447 bits (783), Expect = 0.0
Identities = 1409/1708 (82%), Gaps = 55/1708 (3%)
Strand=Plus/Plus
Query 348 GATCTGGCTGGAGTACGGTGACAAAATTGTTCCTACAGATGAGGAACACATTGCTCAAAC 407
||| ||||| |||||| |||||||| ||||||| |||||||| |||||||| || || |
Sbjct 300 GATTTGGCTTGAGTACAGTGACAAAGTTGTTCCCACAGATGAAGAACACATCACTGAAGC 359
Query 408 TATTTGTGCAGCTACAGACGTGATAGCTGGATCTGGCAAAGGGGTTTCAGACACACCCCT 467
|||||| || || ||||| ||||| || |||||||| |||||||| |||||| | || |
Sbjct 360 TATTTGCGCTGCAACAGATGTGATTGCAGGATCTGGTAAAGGGGTCTCAGACGC-TCCAT 418
Query 468 T-ACGCTCCATGTGAAGAAGGCTGGTGTTCCAGATATTACTATGGTTGATCTCCCTGGAA 526
| || |||||||||||||||||||||||||||||| |||| ||||| ||||| |||||||
Sbjct 419 TGACCCTCCATGTGAAGAAGGCTGGTGTTCCAGATCTTACCATGGTCGATCTTCCTGGAA 478
Query 527 TAACCCGTGTTCCTGTGAACGGACAGCCTGAAAATATTTATGAACAGAT-T-TCCAGGAT 584
|||| || ||||| ||||| |||||||| |||||||||||||| ||||| | | || ||
Sbjct 479 TAACTCGAGTTCCAGTGAATGGACAGCCGGAAAATATTTATGAGCAGATCTCTTCA--AT 536
Query 585 GGTTATGAAGTATATTGAGCCACAAGAATCAATCATACTCAATGTTCTGTCAGCGACAGT 644
| | |||||||| || ||||| ||||||||||| || ||||| ||||||||||| || ||
Sbjct 537 GATCATGAAGTACATCGAGCCTCAAGAATCAATAATCCTCAACGTTCTGTCAGCTACGGT 596
Query 645 TGATTTCACTACTTGTGAATCCA-TCAGAATGTCTAA-ACAGGTGGACAAAACCGGTGAG 702
|||||||| || |||||||||| || | ||||| || ||| || |||||||||||||||
Sbjct 597 GGATTTCACCACATGTGAATCCATTC-GCATGTC-AAGACAAGTTGACAAAACCGGTGAG 654
Query 703 CGGACTCTGGCTGTAGTCACAAAGGCTGACATGGCTCCTGAAGGGCTTCTCCAGAAAGTA 762
|||||| ||||||| ||||||||||| ||||||||||||||||| || || |||||||||
Sbjct 655 CGGACTTTGGCTGTTGTCACAAAGGCAGACATGGCTCCTGAAGGACTCCTGCAGAAAGTA 714
Query 763 ACTGCAGATGATGTGAGTATCGGACTTGGTTATGTCTGTGTTAGAAACCGGATAGGGGAG 822
|| ||||||||||||||||| || || ||||| |||||||| |||||||| ||||| ||
Sbjct 715 ACAGCAGATGATGTGAGTATAGGTCTAGGTTACGTCTGTGTCAGAAACCGCATAGGCGAA 774
Query 823 GAAACCTATGAAGAAGCTCGAATGCAAGAAGAGTTACTTTTCAGGACCCACCCGATGCT- 881
|| | ||||||||||| |||| ||||||||||||||||||||||| || || |||||
Sbjct 775 GAGTCATATGAAGAAGCAAGAATTCAAGAAGAGTTACTTTTCAGGACTCATCCAATGCTA 834
Query 882 TTCAATGATCAATGATGAGATTGTGGGTA-TCCCCGTCTTAGCTCAGAAGCTGACGCAGA 940
| ||||| ||||||| |||||||| | |||| || |||||||||||||| | | |
Sbjct 835 AGC-TTGATCGATGATGACATTGTGGG-AGTCCCTGTTTTAGCTCAGAAGCTAATGTTTA 892
Query 941 TCCAGGGAATGATGATATCTAGGTGTTTGCCGGAAATCGAAAGGAAGATAAATGTGAAGA 1000
|||| | || |||||| || | |||||||| ||||| | | ||||| ||| ||||
Sbjct 893 TCCAAGCAACGATGATTTCCCGCTGTTTGCCTGAAATTGTTCGCAAGATCAATCACAAGA 952
Query 1001 TGGAAATCAG-TGTCCTGGAGTTTAACAAGCTCCCAATAGTCATGGCTTCTACTGGGGAA 1059
|||||| | | |||||| ||||| |||||| | || || || ||||||||||| || |||
Sbjct 953 TGGAAA-CCGCTGTCCTTGAGTTGAACAAGTTACCGATGGTAATGGCTTCTACCGGAGAA 1011
Query 1060 GCATTAATGTC-TCTAATGGATATCATTGGTTCTGCCAAGGAGTCTCTAC-TAAGAATCC 1117
||||| ||| | | | ||||| ||||||||||||||||||||||| || | ||||||| |
Sbjct 1012 GCATTGATGGCAT-TGATGGACATCATTGGTTCTGCCAAGGAGTCACT-CTTAAGAATTC 1069
Query 1118 TTGTCCATGGAGATTTCTCTGAATACCCTAACGATCAAAAGATGCATTGCACAGCTCGCT 1177
| || || |||||||||||||||| |||| | ||||| || |||||||| || |||||||
Sbjct 1070 TCGTTCAAGGAGATTTCTCTGAATTCCCTGATGATCAGAACATGCATTGTACTGCTCGCT 1129
Query 1178 TGGCTGAAATGTTAAACCGATTCTCAGACAATCTGC-AGGCACAGCCTCAAGCCGTGACA 1236
||||||| ||||||| || |||||| || ||||||| || || |||| | | ||||||
Sbjct 1130 TGGCTGATATGTTAAGCCAATTCTCCGATAATCTGCAAGCCA-AGCCAGAGGACGTGAC- 1187
Query 1237 GAAGAGTTCTTGATGGATGAAATCAAAG-T-CTTAGAAGAGCGCAAATGTATCGGATTGC 1294
|||||||| ||||| |||||| ||| | ||| || ||| |||| ||| | |||||||
Sbjct 1188 --CGAGTTCTTAATGGACGAAATC-AAGATCCTT-GACGAGTGCAAGTGTGTTGGATTGC 1243
Query 1295 CTAATTTTATACCAAGATCTTCTTTCTTAGCAATCCTTTCACAACATGTGGATGGGATA- 1353
| ||||| || || ||||| ||||||| || || || |||||||| || || | |||
Sbjct 1244 CCAATTTCATCCCGAGATCAGCTTTCTTGGCCATTCTCTCACAACACGTTGA--GAATAT 1301
Query 1354 -CAAGACAAGCCAGTTGAGTTCATCAAGG-AGATATGGGACTACATTGAAGTCGTTCTGT 1411
|| | ||||||||| ||||||||| ||| |||| ||||||||||||||||| ||||| |
Sbjct 1302 TCATGTCAAGCCAGTGGAGTTCATC-AGGAAGATCTGGGACTACATTGAAGTTGTTCTCT 1360
Query 1412 CATCAGTCATTACGACA-TATTCTGACAACTTTCCC-CAGATTCAATCCTCCATCAAAAG 1469
||||||||||||| | | || || || ||| ||||| ||||| ||||| |||||||| |
Sbjct 1361 CATCAGTCATTACCA-AGTACTCGGAAAAC-TTCCCGCAGATCCAATCAGCCATCAAACG 1418
Query 1470 GGCTGGTCGTAATCTAATGAGCAGGACT-AAGGAACGTTCCGT-GAACTGAGTAATTGAG 1527
|| ||||| |||||||| | || || | ||||||| || || || | |||| || |||
Sbjct 1419 TGCCGGTCGAAATCTAATCACCAAGA-TCAAGGAACAATCAGTAGAGC-GAGTGATGGAG 1476
Query 1528 ATCGTTGAGATGGAGAAGCTTACCGATTACACATGTAACCCAGATTACATGACTTCTTGG 1587
|| ||||| ||||||||||| || ||||||||||||||||| || |||||||| ||||||
Sbjct 1477 ATAGTTGAAATGGAGAAGCTGACGGATTACACATGTAACCCTGAGTACATGACGTCTTGG 1536
Query 1588 ACTCAGAAGACAACCT-CACAGCAAAACTTCA-TCAATTCTGTGTTGCACGATGAGAATA 1645
|| ||||| || || ||| |||||||||| || || |||||||| |||||| ||| |
Sbjct 1537 ACCCAGAAAAC-TGCTGAACAACAAAACTTCATTC-ATGCTGTGTTGTACGATGCGAA-A 1593
Query 1646 AA-CCTG-AGAATTTTGCTTTACCTGGATTCGGGGATGTGAAGATCTCGCATCTGCGAAA 1703
|| |||| | | || | | ||| ||||||| ||| ||||||||||||||||||| || ||
Sbjct 1594 AAGCCTGAACACTTCT-CGTTAACTGGATTTGGGAATGTGAAGATCTCGCATCTACGGAA 1652
Query 1704 GTATCACGCTCAT-TTGCTGCAACAAGCGTTTGATATGAAGATGAGGATCACATCTTACT 1762
||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1653 GTATCACGCTCATCTT-CTGCAACAAGCGTTTGATATGAAGATGAGGATCACATCATACT 1711
Query 1763 GGACGATCGTATTGCGAAGGGTTGTCGATAACCTTGCTCTCTACCTTCAATTCTCTGTGA 1822
||| |||||| ||||| ||| |||| || | |||||| || || |||||| | |||||||
Sbjct 1712 GGAGGATCGTCTTGCGTAGGATTGTTGACAGCCTTGCGCTGTATCTTCAACTATCTGTGA 1771
Query 1823 AGA-ATCTGGTCAACAGTCAGTTTCAGAAGGAGATTGTGGCGGAGATGGTGGATCCAAGA 1881
| | |||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1772 A-ATATCTCGTGAACAGTCAGTTTCAGAAGGAGATTGTGGCGGAGATGGTGGATCCAAGA 1830
Query 1882 GCTGGCGGAGGAATAGATAGGATGCTGGAGGAATCACCGTCGGTGGCGAGCAAGAGGGAG 1941
|||||||||||| | || |||||||||||||| || ||||||||||| ||||||||||||
Sbjct 1831 GCTGGCGGAGGAGTGGAGAGGATGCTGGAGGAGTCTCCGTCGGTGGCAAGCAAGAGGGAG 1890
Query 1942 AAGCTGAAGAATAGTCTCAAGCTTCTGAAGGAATCCAAGGACGTTGTGGCGGCCATTGTT 2001
||||| ||||| ||| |||||||||||||||| |||||||| | |||||| |||||||||
Sbjct 1891 AAGCTTAAGAACAGTATCAAGCTTCTGAAGGAGTCCAAGGATGCTGTGGCCGCCATTGTT 1950
Query 2002 GATCAGAACTCTGTATACGCTGATCGTT 2029
||||||| |||| |||| |||||||
Sbjct 1951 GATCAGAGTTCTGGGTACGGAGATCGTT 1978
Score = 331 bits (179), Expect = 1e-89
Identities = 261/301 (87%), Gaps = 4/301 (1%)
Strand=Plus/Plus
Query 1 ATGGGACGTAGTAACAAGCATGATGTCACTAGTACCACTCCTTCTCTGGCAATTGTCCAG 60
|||||| ||||||| ||||||| ||||||||| ||| |||||||||| || ||||| |
Sbjct 1 ATGGGAGGTAGTAAGAAGCATGTTGTCACTAGAACCTCTCCTTCTCTTGCCATTGTTGAA 60
Query 61 GCGA-ATCCTCACCCCCACAAAGATGTTGTTCCCACAGAAGCACCAATTGTATCATCTTA 119
|| | ||||||| | |||||| ||||||||||| ||||||||||| |||||||| ||
Sbjct 61 GC-ACATCCTCATGACAACAAAGCTGTTGTTCCCATTGAAGCACCAATAGTATCATCGTA 119
Query 120 CAATGACCACATCAGGCCGTTGCTTGACACTGTGGACAAGCTCAGGAACTTGAATGTGAT 179
||||||| |||||||||||||||||||||||| |||| ||| |||||| | ||||||||
Sbjct 120 TAATGACCGCATCAGGCCGTTGCTTGACACTGTTGACAGGCTAAGGAACCTCAATGTGAT 179
Query 180 GCA-AGAAGGGATTCAGCTTCCTACCATTGTTGTGGTTGGAGACCAGTCCTCGGGGAAGT 238
| | ||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct 180 G-AGAGAAGGGATCCAGCTTCCCACCATTGTTGTGGTTGGAGACCAGTCCTCAGGGAAGT 238
Query 239 CGAGTGTCCTCGAGTCGTTGGCAGGAATCAGTTTGCCACGTGGGCAAGGAATCTGCACTA 298
| ||||| || || || ||||| |||||||||||||| ||||||||||||||||||||||
Sbjct 239 CAAGTGTTCTTGAATCCTTGGCTGGAATCAGTTTGCCTCGTGGGCAAGGAATCTGCACTA 298
Query 299 G 299
|
Sbjct 299 G 299
> Ahg338323 jgi|Araly1|338323|fgenesh1_pg.C_scaffold_2000422
Length=2040
Score = 1194 bits (646), Expect = 0.0
Identities = 1550/1975 (78%), Gaps = 107/1975 (5%)
Strand=Plus/Plus
Query 98 AAGCACCAATTGTATCATCTTACAATGACC-ACATCAGGCCGTTGCTTGACACTGTGGAC 156
||||||||||| |||| ||||| |||||| | || |||||||||||||||||||| |||
Sbjct 98 AAGCACCAATTATATCTTCTTATGATGACCGA-ATTAGGCCGTTGCTTGACACTGTTGAC 156
Query 157 AAGCTCAGGAACTTGAATGTGATGCA-AGAAGGGATTCAGCTTCCTACCATTGTTGTGGT 215
||| | |||||| ||||||||||| | |||||||| |||||||| ||||||||||||||
Sbjct 157 AAGTTGAGGAACCTGAATGTGATG-AGTGAAGGGATCCAGCTTCCCACCATTGTTGTGGT 215
Query 216 TGGAGACCAGTCCTCGGGGAAGTCGAGTGTCCTCGAGTCGTTGGC-AGGAATCAGTTTGC 274
|||||||||||||| |||||||| || || ||||||||| |||| || |||||||||||
Sbjct 216 TGGAGACCAGTCCTATGGGAAGTCTAGCGTTCTCGAGTCGCTGGCCAG-AATCAGTTTGC 274
Query 275 CACGTGGGCAAGGAATCTGCACTAGAGTTCCTCTTGTCATGAGGCTCCAG-AGAAG-TCG 332
| || ||| |||||||||||||||| ||||||||||| |||||||| ||| ||| | ||
Sbjct 275 CTCGCGGGGAAGGAATCTGCACTAGGGTTCCTCTTGTGATGAGGCTTCAGCAGA-GCTCT 333
Query 333 AAGCCCTGAACCTGAGATCTGGCTGGAGTACGG--TG-AC---AA-AATT--GTTCCTAC 383
| || |||||||||||||||||| ||||||| || || || ||| ||| ||
Sbjct 334 A-GCTTTGAACCTGAGATCTGGCTTGAGTACGAACTGTACGGTAAGAATAAAGTTGATAA 392
Query 384 A---GATGAGGAACACATTGCTCAAACTATTTGTGCAGCTACAGACG-TGATAGCTGGAT 439
| || ||||| ||||||||| || ||||| | ||| || || | | || || ||||
Sbjct 393 AACTGACGAGGAGCACATTGCTGAAGCTATTCGCAAAGCAACCGATGCT-ATTGCAGGAT 451
Query 440 CTGGCAAAGGGGTTTCAGACACACCCCTT-ACGCTCCATGTGAAGAAGGCTGGTGTTCCA 498
|||| |||||||| |||||||| ||| || || |||||||||| ||| ||||| ||||||
Sbjct 452 CTGGAAAAGGGGTCTCAGACACTCCC-TTGACCCTCCATGTGATGAAAGCTGGCGTTCCA 510
Query 499 GATATTACTATGGTTGATCTCCCTGGAATAACCCGTG-TTCCTGT-GAACGGACAGCCTG 556
|| |||| ||| |||| ||||| || || ||| | || |||| || || ||||| |
Sbjct 511 AATCTTACCATGATTGACCTCCCCGGGATTGTCCG-GATTGCTGTTGAT-GGCCAGCCGG 568
Query 557 AAAATATTTATGAACAGATTTCCAGG-ATGGTTATGAAGTATATTGAGCCACAAGAATCA 615
||||||| ||||| || ||||| | ||| |||||||||| |||||||| || ||| ||
Sbjct 569 AAAATATATATGAGCAAATTTCT-GCTATGATTATGAAGTACATTGAGCCTCAGGAAACA 627
Query 616 ATCATACTCAATGTTCTGTCAGCGACA-GTTGATTTCACTACTTGTGAATCCATCAGAAT 674
|| || ||||| ||||| ||||| || ||||||||||| || |||||||||||| | ||
Sbjct 628 ATAATCCTCAACGTTCTATCAGCT-CAAGTTGATTTCACCACCTGTGAATCCATCCGTAT 686
Query 675 GTCTAAACAGGTGGACAAAACCGGTGAGCGGACTCTGGCTGTAGTCAC-AAAGGCTGACA 733
||||| || || |||||||| ||||| || ||||||||||| || || |||| | |||
Sbjct 687 GTCTAGGCAAGTTGACAAAACTGGTGAACGAACTCTGGCTGTTGTGACGAAAGTC-GACT 745
Query 734 TGGCTCCTGAAGGGCTTCTCCAGAAAGTAACTGCAGATGATGTGAGTATCGGACTTGGTT 793
| ||||| ||||| || || || |||||||||||| ||||||||||||||||||| ||||
Sbjct 746 TAGCTCCAGAAGGTCTCCTTCACAAAGTAACTGCAAATGATGTGAGTATCGGACTCGGTT 805
Query 794 ATGTCTGTGTTAGAAACCGGATAGGGGAGGAAACCTATGAAGAAGCTCGAATGCAAGAAG 853
|||||||||| || ||||| ||||| | |||||||||||||||||| | | |||||||
Sbjct 806 ATGTCTGTGTCAGGAACCGTATAGGAAACGAAACCTATGAAGAAGCTAGGTTACAAGAAG 865
Query 854 AGTTACTTTTCAGGACCCACCCGATGCTTTCAATGATCAATGATGAGATTGTGGGTATCC 913
|||| ||||||| || || || | ||||| ||||| | ||||||||||| ||||| |
Sbjct 866 AGTTGCTTTTCAAGAAGCATCC-A--CTTTCCATGATTGACGATGAGATTGTTGGTATTC 922
Query 914 CCGTCTTAGCTCAGAAGCTGACGCAGATCCAGG-GA-ATGATGAT-ATCTAGGTGTTTGC 970
| || |||||||||||| | || || ||||||| || | ||||| | | | |||||||
Sbjct 923 CGGTTTTAGCTCAGAAGTTAACACAAATCCAGGCGACA--ATGATCACCC-GATGTTTGC 979
Query 971 CGGAAATCGAA-AG-GAAGATAAATGTGAAGATGGA-AATCAGTGTC-CTGGAGTTTAAC 1026
| || || | | || ||| | |||| || ||||| || |||| | | | |||| |||
Sbjct 980 CAGATATAGTACAGAGAA--TCAATGAAAAAATGGACAA-CAGTACCGCCG-AGTTGAAC 1035
Query 1027 AAGCTCCCAATAG-TCATGGCTTCTACTGGGGAAGCATTAATGTCTCTAATG-GATATCA 1084
||||| |||| || | ||| | ||||| ||||||| || | || | || | |||||
Sbjct 1036 AAGCTACCAA-AGGTAATGACATCTACAAGGGAAGCTTTGTTCACTTTCCTGCG-TATCA 1093
Query 1085 TTGGTTCTGCCAAGGAGTCTCT-ACTAAGAATCCTT-GTCCATGGAGATTTCTCTGAATA 1142
||||||| |||| || || || | ||| ||| || ||||| || ||||| |||||||
Sbjct 1094 TTGGTTCCACCAAAGAATCACTCA-TAAAAATT-TTAGTCCAAGGCGATTTTTCTGAATT 1151
Query 1143 CCCTA-ACGATCAAAAG-ATGCATTGCA-CAGCTCGCTTGGCTGAAATGTTAAACCGATT 1199
|| | | |||||| | ||||| | || | || || |||||||| ||||| || |||
Sbjct 1152 TCC-AGATGATCAAT-GCATGCACT-CAACCGCGCGTTTGGCTGATATGTTGGGCCAATT 1208
Query 1200 CTCAGACAATCTGCAGGCACAGCCTCAAGCCGTGACAGAAGAGTTCTTGATGGATGAAAT 1259
|||||||||||| || ||||| || ||| |||||| || ||||||||||||||||||||
Sbjct 1209 CTCAGACAATCTACAAGCACACCCCCAAAACGTGACGGATGAGTTCTTGATGGATGAAAT 1268
Query 1260 CAAAGT-CTTAGAAGAGCGCAAATGTATCGGATTGCCTAATTTTATACCAAGATCTTCTT 1318
|||||| || ||||||| |||||| |||||||||||||||||| || ||||||||| | |
Sbjct 1269 CAAAGTACT-AGAAGAGTGCAAATCTATCGGATTGCCTAATTTCATCCCAAGATCTGCCT 1327
Query 1319 TCTTAGCAATCCTTTCACAACATGTGGATGGGATACAAGAC-AAGCCAGTTGAGTTCATC 1377
|| |||| ||||||||||||| | | |||| || || || ||||| ||||||||||||
Sbjct 1328 TCATAGCTATCCTTTCACAACGTATTGATGCAATTCAT-ACTAAGCCGGTTGAGTTCATC 1386
Query 1378 A-AGGAGATATGGGACTACATTGAAGTCGTTCTGTCATCAGT-CATTACGACATATTCTG 1435
| || ||| || |||||||||||||| |||||| | ||| || | |||| | ||| ||||
Sbjct 1387 AGAG-AGACATTGGACTACATTGAAGGCGTTCTATTATCTGTTC-TTACCAAATACTCTG 1444
Query 1436 ACAACTTTCCC-CAGATTCAATCCTC-CATCAAAAGGGCTGGTCGTAATCTAATGAGCAG 1493
| ||||| ||| |||||||||||||| | ||||||| |||||||| |||||||| | ||
Sbjct 1445 AAAACTT-CCCACAGATTCAATCCTCAC-TCAAAAGAGCTGGTCGGAATCTAATCACCAA 1502
Query 1494 GA-CTAAGGAACGTTCCGTGAACTGAGTAATTGAGATCGTTGAGATGGAGAAGCTTACCG 1552
|| | ||||||| || |||| | ||||||| || ||| | ||||||||||| || ||||
Sbjct 1503 GATC-AAGGAACAATCTGTGAGCAGAGTAATCGAAATCATCGAGATGGAGAAACTAACCG 1561
Query 1553 ATTACACATGTAACCCAGATTACATGACT-TCTTGGACTC-AGAAGACAACCT-CACA-G 1608
| |||||||||||||| || || ||||| | | || | |||||| | | | || |
Sbjct 1562 ACTACACATGTAACCCTGAGTATATGACAGTATAC-AC-CGAGAAGATTGC-TGCGCAAG 1618
Query 1609 CAAAACTTCATCAATTCTGTGT-T-GCACGA-TGAGAATAAACCTGAGAATTTTGCTTTA 1665
|| |||||||| | |||| | ||| | | ||| | | || || || | |
Sbjct 1619 GAAG-CTTCATCACTGCTGTACATAGCAATAATTCGAACAT-C-TGC-AACTTAAATGCA 1674
Query 1666 CCTGGATTCGGGGATGTGAAGATCTCGCATCTGCGAAAGTATCACGCTCATTTGCTGCAA 1725
|||||||||| |||| |||| |||||||| | |||||| | || || ||||| |
Sbjct 1675 TCTGGATTCGGAAATGTTCAGATTTCGCATCTAAGGAAGTATGATGCGCAATTGCTT-AG 1733
Query 1726 -CAAGCGTTTGATATGAAGATGAGGATCACATCTTACTGGACGATCGTATTGCGAAGGGT 1784
||||||||||| |||||| | || |||||||||||||||| ||||| | |||||| |
Sbjct 1734 GCAAGCGTTTGACATGAAGGTTAGAATCACATCTTACTGGATAATCGTCGTACGAAGGAT 1793
Query 1785 TGTCGATAACCTTGCTCTCTACCTTCAATTCTCTGTGAAGAATCTGGTCAACAGTCAGTT 1844
||| |||| ||||||||| || ||||||||||||||||||||||| || ||||| || ||
Sbjct 1794 TGTGGATAGCCTTGCTCTGTATCTTCAATTCTCTGTGAAGAATCTTGTGAACAGCCAATT 1853
Query 1845 TCAGAAGGAGATTGTGGCGGAGAT-GGTGGATCCAAGAGCTGGCGGAGGA-ATAGAT-AG 1901
||||||||||| | || ||| || |||| || || | |||||||||| | || | ||
Sbjct 1854 ACAGAAGGAGATCGGGGAGGA-ATTGGTGAATTCATG---TGGCGGAGGAGA-AGTTGAG 1908
Query 1902 --GATGCTGGAGGAATCACCGTCGGTGGCGAGCAAGAGGGAGAAGCTGAAGAATAGTCTC 1959
|||||| ||||| || |||||||||||||| |||||||||||||||||||| ||| ||
Sbjct 1909 AAGATGCTAGAGGAGTCTCCGTCGGTGGCGAGTAAGAGGGAGAAGCTGAAGAACAGTATC 1968
Query 1960 AAGCTTCTGAAGGAATCCAAGGACGTTGTGGCGGCCATTGTTGATCAGAACTCTG 2014
|||||||||||||| | ||||| | |||||| ||||||||||||||||||||||
Sbjct 1969 AAGCTTCTGAAGGAGTGTAAGGATGCTGTGGCTGCCATTGTTGATCAGAACTCTG 2023
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 76370941225
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5