BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G60690.1
Length=1038
Score E
Sequences producing significant alignments: (Bits) Value
Ahg924983 jgi|Araly1|924983|scaffold_200544.1 1557 0.0
Ahg475258 jgi|Araly1|475258|fgenesh2_kg.2__388__AT1G60730.1 1312 0.0
Ahg475260 jgi|Araly1|475260|fgenesh2_kg.2__390__AT1G60710.1 1243 0.0
Ahg475262 jgi|Araly1|475262|fgenesh2_kg.2__392__AT1G60680.1 1136 0.0
Ahg924984 jgi|Araly1|924984|scaffold_200545.1 183 2e-45
> Ahg924983 jgi|Araly1|924983|scaffold_200544.1
Length=1085
Score = 1557 bits (843), Expect = 0.0
Identities = 973/1038 (94%), Gaps = 0/1038 (0%)
Strand=Plus/Plus
Query 1 ATGGCGGAATCTTGCAGAGTGAGGAGGATAAAGCTAGGAAGTCAAGGCCTAGAGGTATCG 60
||||||||| ||||||||||| ||||||| ||||||||||| |||||||| |||||||||
Sbjct 28 ATGGCGGAAGCTTGCAGAGTGCGGAGGATGAAGCTAGGAAGCCAAGGCCTCGAGGTATCG 87
Query 61 GCGCAAGGCCTTGGTTGCATGGGACTCACCGGTCATTACGGTGCTTCCAAGCCGGAAACT 120
||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||
Sbjct 88 GCGCAAGGCCTTGGTTGCATGGGCCTCTCTGGTCATTACGGTGCTTCCAAGCCGGAAACT 147
Query 121 GAAGCCATCGCTCTCATCCACCACGCTATTCACTCCGGTGTTACTTTCCTTGACACTTCT 180
|||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||| |||
Sbjct 148 GAAGCCATCGCTCTTATCCACCACGCTATTAACTCCGGCGTTACTTTCCTTGACACCTCT 207
Query 181 GACATGTATGGTCCTGAAACCAATGAAATTCTCCTCGGAAAGGCTCTTAAGGATGGTGTG 240
|||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct 208 GACATGTATGGTCCTGAAACTAATGAAATTCTCCTTGGAAAGGCTCTTAAGGATGGTGTG 267
Query 241 AGGGAGAAAGTGGAGCTTGCGACCAAATTTGGAATCAGTTATGCAGAGGGAAACAGAGAG 300
||||||||||||||||||||||||||||||||||| || |||||||||||||| || ||
Sbjct 268 AGGGAGAAAGTGGAGCTTGCGACCAAATTTGGAATTAGCTATGCAGAGGGAAAGAGGGAA 327
Query 301 ATTAAGGGAGATCCTGCTTATGTTAGAGCTGCCTGTGAGGCTAGTTTAAAGAGACTAGAT 360
||||||||||||||||| |||||||||||||| |||||||||||||||||| | ||||||
Sbjct 328 ATTAAGGGAGATCCTGCCTATGTTAGAGCTGCTTGTGAGGCTAGTTTAAAGCGGCTAGAT 387
Query 361 GTTACCTGCATTGATCTGTATTATCAGCATCGGATTGATACTCGTGTTCCTATTGAAATC 420
||| ||||||||||||| ||||||||||||||||| ||||||||||| ||||| ||||||
Sbjct 388 GTTTCCTGCATTGATCTTTATTATCAGCATCGGATCGATACTCGTGTCCCTATCGAAATC 447
Query 421 ACTATGGGAGAACTGAAGAAGCTAATTGAAGAGGGTAAAATAAAGTACATAGGTTTGTCT 480
|||||||||||||| |||||||| ||||||||||||||||||||||||| |||||||||
Sbjct 448 ACTATGGGAGAACTAAAGAAGCTGGTTGAAGAGGGTAAAATAAAGTACATCGGTTTGTCT 507
Query 481 GAGGCCTCTGCCTCAACTATCAGAAGAGCGCATACTGTTCACCCAATCACCGCCGTGCAG 540
|||||||||| ||| |||||||||||||||||| ||||||||||||| || |||||||||
Sbjct 508 GAGGCCTCTGGCTCGACTATCAGAAGAGCGCATGCTGTTCACCCAATTACTGCCGTGCAG 567
Query 541 TTAGAGTGGTCCTTGTGGACAAGAGACGTGGAAGAAGAAATTGTCCCAACCTGCAGGGAA 600
|||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct 568 TTAGAGTGGTCCCTGTGGACGAGAGACGTGGAAGAAGAAATCGTCCCAACCTGCAGGGAA 627
Query 601 CTTGGAATTGGGATTGTTTCTTACAGTCCTCTAGGAAGAGGTTTCTTTGCATCAGGACCT 660
||||| |||||||||||||||||||||||||||||| |||||||||||||||| |||||
Sbjct 628 CTTGGGATTGGGATTGTTTCTTACAGTCCTCTAGGACGAGGTTTCTTTGCATCGGGACCC 687
Query 661 AAGCTTGTTGAGAACCTAGACAATAATGACTTCAGAAAGGCTCTACCAAGATTCCAACAG 720
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 688 AAGCTTGTTGAGAACCTAGACAATAGTGACTTCAGAAAGGCTCTACCAAGATTCCAACAG 747
Query 721 GAAAACTTGGATCACAACAAGATTCTCTATGAGAAAGTTTCTGCAATGTCTGAGAAGAAA 780
|||||||| || ||||||||||||||||||||||| |||| |||||| || ||||||||
Sbjct 748 GAAAACTTAGACCACAACAAGATTCTCTATGAGAAGGTTTGTGCAATATCAAAGAAGAAA 807
Query 781 GGGTGCACTCCCGCACAACTAGCCCTCGCTTGGGTTCACCACCAGGGAGATGATGTTTGT 840
|| |||| ||||| ||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct 808 GGATGCAGTCCCGGACAACTAGCCCTCGCCTGGGTTCACCACCAAGGAGATGATGTTTGC 867
Query 841 CCCATTCCAGGAACCACTAAGATTGAAAACCTCAACCAGAACATTAGAGCTTTATCAGTG 900
||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 868 CCCATCCCAGGAACCACTAAGATTGAAAACCTCAACCAGAACATTGGAGCTTTATCAGTG 927
Query 901 AAACTCACTCCTGAAGAGATGTCTGAGCTTGAGACCATTGCCCAACCAGAGTCTGTGAAA 960
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 928 AAACTCACTCCTGAAGAGATGTCTGAGCTCGAGACCATTGCCCAACCAGAGTCTGTGAAA 987
Query 961 GGAGAAAGATACATGGCCACAGTGCCAACCTTCAAAAACTCCGACACTCCACCATTGTCT 1020
||||||||||||||||| ||||||||||||||||| ||||| ||||||||||| ||||||
Sbjct 988 GGAGAAAGATACATGGCAACAGTGCCAACCTTCAAGAACTCTGACACTCCACCGTTGTCT 1047
Query 1021 TCTTGGAATGCTGTGTAA 1038
||||||||||||||||||
Sbjct 1048 TCTTGGAATGCTGTGTAA 1065
> Ahg475258 jgi|Araly1|475258|fgenesh2_kg.2__388__AT1G60730.1
Length=1151
Score = 1312 bits (710), Expect = 0.0
Identities = 927/1033 (90%), Gaps = 10/1033 (1%)
Strand=Plus/Plus
Query 1 ATGGCGGAATCTTGCAGAGTGAGGAGGATAAAGCTAGGAAGTCAAGGCCTAGAGGTATCG 60
||||||||| ||||| ||||||| ||||| ||||||||||| |||||||| |||||||||
Sbjct 28 ATGGCGGAAGCTTGCGGAGTGAGAAGGATGAAGCTAGGAAGCCAAGGCCTTGAGGTATCG 87
Query 61 GCGCAAGGCCTTGGTTGCATGGGACTCACCGGTCATTACGGTGCTTCCAAGCCGGAAACT 120
||||||||||||||||||||||| ||| ||| | |||||||||| |||||||||||||
Sbjct 88 GCGCAAGGCCTTGGTTGCATGGGCCTCTCCGCTTTTTACGGTGCTCCCAAGCCGGAAACC 147
Query 121 GAAGCCATCGCTCTCATCCACCACGCTATTCACTCCGGTGTTACTTTCCTTGACACTTCT 180
||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct 148 GAAGCCATCGCTCTCATCCACCACGCTATTCACTCCGGTGTCACTTTCCTTGACACCTCT 207
Query 181 GACATGTATGGTCCTGAAACCAATGAAATTCTCCTCGGAAAGGCTCTTAAGGATGGTGTG 240
||||| || |||||||||||||| || |||| ||| | |||||||| |||||||| |||
Sbjct 208 GACATTTACGGTCCTGAAACCAACGAGGTTCTTCTCAGCAAGGCTCTCAAGGATGGAGTG 267
Query 241 AGGGAGAAAGTGGAGCTTGCGACCAAATTTGGAATCAGTTATGCAGAGGGAAACAG-AGA 299
|| || |||||||| ||||||||||||| ||||||||| ||||||||||| || || |||
Sbjct 268 AGAGAAAAAGTGGAACTTGCGACCAAATATGGAATCAGGTATGCAGAGGGGAA-AGTAGA 326
Query 300 GATTAAGGGAGATCCTGCTTATGTTAGAGCTGCCTGTGAGGCTAGTTTAAAGAGACTAGA 359
| |||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||
Sbjct 327 GTTTAAGGGAGATCCTGCTTATGTAAGAGCTGCGTGTGAGGCTAGTTTAAAGAGGCTAGA 386
Query 360 TGTTACCTGCATTGATCTGTATTATCAGCATCGGATTGATACTCGTGTTCCTATTGAAAT 419
|||||||||||||||||| |||||||||||||| |||||||||||||| ||||| |||||
Sbjct 387 TGTTACCTGCATTGATCTTTATTATCAGCATCGAATTGATACTCGTGTCCCTATCGAAAT 446
Query 420 CACTATGGGAGAACTGAAGAAGCTAATTGAAGAGGGTAAAATAAAGTACATAGGTTTGTC 479
|||||| ||||| |||||||||||| ||||||| |||||||||||||| || ||||||||
Sbjct 447 CACTATTGGAGAGCTGAAGAAGCTAGTTGAAGAAGGTAAAATAAAGTATATCGGTTTGTC 506
Query 480 TGAGGCCTCTGCCTCAACTATCAGAAGAGCGCATACTGTTCACCCAATCACCGCCGTGCA 539
|| || || || |||||||||||| |||| ||| |||||||||| || ||||| ||||
Sbjct 507 AGAAGCTTCAGCTTCAACTATCAGACGAGCACATGCTGTTCACCCGATAACCGCTATGCA 566
Query 540 G-TTAGAGTGGTCCTTGTGGACAAGAGACGTGGAAGAAGAAATTGTCCCAACCTGCAGGG 598
|| || |||||||| ||| | ||||| ||||||||||| | | |||||||||||||
Sbjct 567 AATT-GAATGGTCCTTATGGTCGAGAGATGTGGAAGAAGATGTCATTCCAACCTGCAGGG 625
Query 599 AACTTGGAATTGGGATTGTTTCTTACAGTCCTCTAGGAAGAGGTTTCTTTGCATCAGGAC 658
||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 626 AACTTGGAATTGGAATTGTTGCTTACAGTCCTCTAGGAAGAGGTTTCTTTGCATCAGGAC 685
Query 659 CTAAGCTTGTTGAGAACCTAGACAATAATGACTTCAGAAAGGCTCTACCAAGATTCCAAC 718
| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 686 CGAAGCTTGTTGAGAACCTAGACAATAATGACTTCAGAAAGACTCTACCAAGATTCCAAC 745
Query 719 AGGAAAACTTGGATCACAACAAGATTCTCTATGAGAAAGTTTCTGCAATGTCTGAGAAGA 778
|||||||||| || |||||||||||||||| ||||||||||||||||||||| |||||||
Sbjct 746 AGGAAAACTTAGACCACAACAAGATTCTCTTTGAGAAAGTTTCTGCAATGTCGGAGAAGA 805
Query 779 AAGGGTGCACTCCCGCACAACTAGCCCTCGCTTGGGTTCACCACCAGGGAGATGATGTTT 838
|||||||||||||||| ||||||||||| || |||||||| |||||||||||||||||||
Sbjct 806 AAGGGTGCACTCCCGCGCAACTAGCCCTTGCATGGGTTCATCACCAGGGAGATGATGTTT 865
Query 839 GTCCCATTCCAGGAACCACTAAGATTGAAAACCTCAACCAGAACATTAGAGCTTTATCAG 898
| ||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct 866 GCCCCATCCCAGGAACCACTAAGATTGAAAACCTTAACCAGAACATTGGAGCTTTATCAG 925
Query 899 TGAAACTCACTCCTGAAGAGATGTCTGAGCTTGAGACCATTGCCCAACCAGAGTCTGTGA 958
||||||| ||||| ||||||||||||||||| ||| || |||||||||||||||||||||
Sbjct 926 TGAAACTTACTCCCGAAGAGATGTCTGAGCTCGAGTCCCTTGCCCAACCAGAGTCTGTGA 985
Query 959 AAGGAGAAAGATACATG-GCCA-CAGTG-CCAACCTTCAAAAACTCCGACACTCCACCAT 1015
|||||||||||| ||| || | | || ||| | ||||| ||||| || ||||||||||
Sbjct 986 AAGGAGAAAGATCCATTAGC-ATCC-TGACCA-CGTTCAAGAACTCTGAGACTCCACCAT 1042
Query 1016 TGTCTTCTTGGAA 1028
|||||||||||||
Sbjct 1043 TGTCTTCTTGGAA 1055
> Ahg475260 jgi|Araly1|475260|fgenesh2_kg.2__390__AT1G60710.1
Length=1197
Score = 1243 bits (673), Expect = 0.0
Identities = 919/1039 (88%), Gaps = 12/1039 (1%)
Strand=Plus/Plus
Query 1 ATGGCGGAATCTTGCAGAGTGAGGAGGATAAAGCTAGGAAGTCAAGGCCTAGAGGTATCG 60
||||||||| ||||| ||||||| ||||| ||||||||||| |||||||| |||||||||
Sbjct 75 ATGGCGGAAGCTTGCGGAGTGAGAAGGATGAAGCTAGGAAGCCAAGGCCTTGAGGTATCG 134
Query 61 GCGCAAGGCCTTGGTTGCATGGGACTCACCGGTCAT-TACGGTGCTTCCAAGCCGGAAAC 119
||||||||||| ||||||||||| ||| ||| | | ||||||||| |||||||||||||
Sbjct 135 GCGCAAGGCCTCGGTTGCATGGGCCTCTCCGCT-TTCTACGGTGCTCCCAAGCCGGAAAC 193
Query 120 TGAAGCCATCGCTCTCATCCACCACGCTATTCACTCCGGTGTTACTTTCCTTGACACTTC 179
||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct 194 TGACGCCATCGCTCTCATCCACCACGCTATTCACTCCGGTGTCACTTTCCTTGACACCTC 253
Query 180 TGACATGTATGGTCCTGAAACCAATGAAATTCTCCTCGGAAAGGCTCTTAAGGATGGTGT 239
|||||| || |||||||||||||| || ||||||| ||||||||||| || ||||| ||
Sbjct 254 TGACATCTACGGTCCTGAAACCAACGAGGTTCTCCTTGGAAAGGCTCTGAAAGATGGAGT 313
Query 240 GAGGGAGAAAGTGGAGCTTGCGACCAAATTTGGAATCAGTTATGCAGAGGGAAACAGAGA 299
|| || |||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct 314 TAGAGAAAAAGTGGAACTTGCGACCAAATTTGGAATCAGTTATGCAGAGGGAAAGAGAGA 373
Query 300 GATTA-AGGGAGATCCTGCTTATGTTAGAGCTGCCTGTGAGGCTAGTTTAAAGAGACTAG 358
| | | ||| |||||||| ||||| || ||||| |||||||||||||||||||| ||||
Sbjct 374 GGTGAGAGG-AGATCCTGAGTATGTAAGGGCTGCTTGTGAGGCTAGTTTAAAGAGGCTAG 432
Query 359 ATGTTACCTGCATTGATCTGTATTATCAGCATCG-GATTGATACTCGTGTTCCTATTGAA 417
|| || |||| |||||||| ||||||||||| || | | ||||||||||||||||| |||
Sbjct 433 ATATTGCCTGTATTGATCTTTATTATCAGCACCGTG-TCGATACTCGTGTTCCTATCGAA 491
Query 418 ATCACTATGGGAGAACTGAAGAAGCTAATTGAAGAGGGTAAAATAAAGTACATAGGTTTG 477
|||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct 492 ATCACTATGGGAGAACTGAAGAAGCTGGTTGAAGAGGGTAAAATAAAGTACATTGGTTTG 551
Query 478 TCTGAGGCCTCTGCCTCAACTATCAGAAGAGCGCATACTGTTCACCCAATCACCGCCGTG 537
||||| |||||||| ||||||||||||||||||||| ||||||||||||| || || |||
Sbjct 552 TCTGAAGCCTCTGCTTCAACTATCAGAAGAGCGCATGCTGTTCACCCAATTACTGCTGTG 611
Query 538 CAGTTAGAGTGGTCCTTGTGGACAAGAGACGTGGAAGAAGAAATTGTCCCAACCTGCAGG 597
|||||||| |||||||||||||| ||||| |||||||||||||| | || |||||||||
Sbjct 612 CAGTTAGAATGGTCCTTGTGGACGAGAGATGTGGAAGAAGAAATCATTCCGACCTGCAGG 671
Query 598 GAACTTGGAATTGGGATTGTTTCTTACAGTCCTCTAGGAAGAGGTTTCTTTGCATCAGGA 657
|||||||| |||||||||||| |||| |||||||||||| |||||||||||||||| |||
Sbjct 672 GAACTTGGGATTGGGATTGTTGCTTATAGTCCTCTAGGACGAGGTTTCTTTGCATCTGGA 731
Query 658 CCTAAGCTTGTTGAGAACCTAGACAATAATGACTTCAGAAAGGCTCTACCAAGATTCCAA 717
|| |||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct 732 CCCAAGCTTGTTGAGAACCTAGAAAAGGATGACTTCAGAAAGGCTCTACCAAGATTCCAA 791
Query 718 CAGGAAAACTTGGATCACAACAAGATTCTCTATGAGAAAGTTTCTGCAATGTCTGAGAAG 777
|| ||||||| || |||||||||||| | |||||||| |||| |||||| || || |||
Sbjct 792 GAGAAAAACTTAGACCACAACAAGATTGTTTATGAGAAGGTTTGTGCAATCTCGGAAAAG 851
Query 778 AAAGGGTGCACTCCCGCACAACTAGCCCTCGCTTGGGTTCACCACCAGGGAGATGATGTT 837
||||| |||||||| ||||| |||| || || |||||||||||||||||||||||||||
Sbjct 852 AAAGGATGCACTCCTGCACAGTTAGCTCTGGCATGGGTTCACCACCAGGGAGATGATGTT 911
Query 838 TGTCCCATTCCAGGAACCACTAAGATTGAAAACCTCAACCAGAACATTAGAGCTTTATCA 897
|||||||| ||||||||||||||||| |||||||||||||| |||||| |||||||| ||
Sbjct 912 TGTCCCATCCCAGGAACCACTAAGATCGAAAACCTCAACCAAAACATTGGAGCTTTAGCA 971
Query 898 GTGAAACTCACTCCTGAAGAGATGTCTGAGCTTGAGACCATTGCCCAACCAGAGTCT-GT 956
||||||||||| || ||||||||| ||||||||||| ||||||||||||||| || | ||
Sbjct 972 GTGAAACTCACACCCGAAGAGATGACTGAGCTTGAGGCCATTGCCCAACCAG-GTGTTGT 1030
Query 957 GAAAGGAGAAAGATACA-TGGCCAC-AGTGCCAACCTTCAAAAACTCCGACACTCCACCA 1014
|||||| ||||||||| | || | | | || || ||||| ||||| |||||||||||
Sbjct 1031 GAAAGGGGAAAGATACGGTAGC-ATGA-TACCCACTTTCAAGAACTCTGACACTCCACCG 1088
Query 1015 TTGTCTTCTTGGAATGCTG 1033
|||||||||||||| ||||
Sbjct 1089 TTGTCTTCTTGGAAAGCTG 1107
> Ahg475262 jgi|Araly1|475262|fgenesh2_kg.2__392__AT1G60680.1
Length=1168
Score = 1136 bits (615), Expect = 0.0
Identities = 904/1042 (87%), Gaps = 25/1042 (2%)
Strand=Plus/Plus
Query 1 ATGGCGGAATCTTGCAGAGTGAGGAGGATAAAGCTAGGAAGTCAAGGCCTAGAGGTATCG 60
||||| ||| ||||||||||||||||||| ||||||||||| |||||||| |||||||||
Sbjct 61 ATGGCTGAAGCTTGCAGAGTGAGGAGGATGAAGCTAGGAAGCCAAGGCCTTGAGGTATCG 120
Query 61 GCGCAAGGCCTTGGTTGCATGGGACTCACCGGTCATTACGGTGCTTCCAAGCCGGAAACT 120
|| ||||||||||||||||||| ||| ||| || ||||||||| ||||||||||||||
Sbjct 121 GCACAAGGCCTTGGTTGCATGGCCCTCTCCGCTCGCTACGGTGCTCCCAAGCCGGAAACT 180
Query 121 GAAGCCATCGCTCTCATCCACCACGCTATTCA-CTCCGGTGTTACTTTCCTTGACACTTC 179
||||||||||||||| ||||||| ||||| || ||| |||||||||||| ||||||| ||
Sbjct 181 GAAGCCATCGCTCTCCTCCACCATGCTAT-CAACTCTGGTGTTACTTTCTTTGACACCTC 239
Query 180 TGACATGTATGGTCCTGAAACCAATGAAATT-CTCCTCGGAAAGGCTCTTAAGGATGG-T 237
||||||||| |||||||| ||||| || || ||||| || |||||||| || ||||| |
Sbjct 240 TGACATGTACGGTCCTGAGACCAACGAG-TTGCTCCTAGGCAAGGCTCTGAAAGATGGCT 298
Query 238 GTGAGGGAGAAAGTGGAGCTTGCGACCAAATTTGGAATCAGTTAT-GCAGAGGG--AAA- 293
||| ||||||||| ||||||||||||||||||||| || |||| | |||||| |||
Sbjct 299 -TGAAGGAGAAAGTAGAGCTTGCGACCAAATTTGGATTCT-TTATAGTAGAGGGGGAAAT 356
Query 294 --CAGAGAGATTAAG-GGAGATCCTGCTTATGTTAGAGCTGCCTGTGAGGCTAGTTTAAA 350
| || | || ||| |||||||||| ||||| |||||||| |||||||| ||| ||||
Sbjct 357 TTCCGA-A-AT-AAGAGGAGATCCTGAGTATGTAAGAGCTGCGTGTGAGGCAAGTGTAAA 413
Query 351 GAGACTAGATGTTACCTGCATTGATCTGTATTATCAGCATCG-GATTGATACTCGTGTTC 409
||| ||||| || ||||||||||||| |||||||||||||| | | |||||||||||||
Sbjct 414 GAGGTTAGATATTGCCTGCATTGATCTCTATTATCAGCATCGTG-TCGATACTCGTGTTC 472
Query 410 CTATTGAAATCACTATGGGAGAACTGAAGAAGCTAATTGAAGAGGGTAAAATAAAGTACA 469
|||| |||||||||||||||||||| ||||||||| | ||||| ||||||||||| || |
Sbjct 473 CTATCGAAATCACTATGGGAGAACTTAAGAAGCTAGTGGAAGAAGGTAAAATAAACTATA 532
Query 470 TAGGTTTGTCTGAGGCCTCTGCCTCAACTATCAGAAGAGCGCATACTGTTCACCCAATCA 529
| |||||||| || || || || ||||||||||||||||||||| |||||||||| || |
Sbjct 533 TTGGTTTGTCAGAAGCTTCAGCTTCAACTATCAGAAGAGCGCATGCTGTTCACCCGATAA 592
Query 530 CCGCCGTGCAGTTAGAGTGGTCCTTGTGGACAAGAGACGTGGAAGAAGAAATTGTCCCAA 589
|||| ||||| |||| |||||||| ||| | ||||||| ||||||||| || | ||||
Sbjct 593 CCGCTGTGCAAATAGAATGGTCCTTATGGTCGAGAGACGCGGAAGAAGATATCATTCCAA 652
Query 590 CCTGCAGGGAACTTGGAATTGGGATTGTTTCTTACAGTCCTCTAGGAAGAGGTTTCTTTG 649
|||||||||||||||| ||||| || || |||| || |||||||||||||| ||||| |
Sbjct 653 CCTGCAGGGAACTTGGGATTGGTATAGTAGCTTATAGCCCTCTAGGAAGAGGCTTCTTAG 712
Query 650 CATCAGGACCTAAGCTTGTTGAGAACCTAGACA-ATAATGACTTCAGAAAGGCTCTACCA 708
|||||||||| ||||||| |||||| || || | | |||||||||||||| ||||||||
Sbjct 713 CATCAGGACCCAAGCTTGCTGAGAATCTGGA-AGACGATGACTTCAGAAAGACTCTACCA 771
Query 709 AGATTCCAACAGGAAAACTTGGATCACAACAAGATTCTCTATGAGAAAGTTTCTGCAATG 768
|||||||||||||||||||| || |||||||||||||||| ||||||||| |||||||||
Sbjct 772 AGATTCCAACAGGAAAACTTAGACCACAACAAGATTCTCTTTGAGAAAGTATCTGCAATG 831
Query 769 TCTGAGAAGAAAGGGTGCACTCCCGCACAACTAGCCCTCGCTTGGGTTCACCACCAGGGA 828
|||| ||||||||| ||| ||||||||||||||||||| || |||||||| |||||||||
Sbjct 832 TCTGCGAAGAAAGGATGCTCTCCCGCACAACTAGCCCTTGCATGGGTTCATCACCAGGGA 891
Query 829 GATGATGTTTGTCCCATTCCAGGAACCACTAAGATTGAAAACCTCAACCAGAACATTAGA 888
| ||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||| ||
Sbjct 892 GCTGATGTTTGCCCCATTCCAGGAACCACGAAGATCGAAAACCTCAACCAGAACATTGGA 951
Query 889 GCTTTATCAGTGAAACTCACT-CCTGAAGAGATGTCTGAGCTTGAGACCATTGCCCAACC 947
||||||||||||||||| ||| || ||||||||||||||||| ||| || ||||||||||
Sbjct 952 GCTTTATCAGTGAAACTTACTACC-GAAGAGATGTCTGAGCTCGAGTCCCTTGCCCAACC 1010
Query 948 AGAGTCTGTGAAAGGAGAAAGATACATGGCCACAGTG-CCAACCTTCAAAAACTCCGACA 1006
| |||||||| ||||||||||||| |||||| ||||| ||| ||||||| ||||||||||
Sbjct 1011 ACAGTCTGTGCAAGGAGAAAGATATATGGCCTCAGTGTCCA-CCTTCAAGAACTCCGACA 1069
Query 1007 CTCCACCATTGTCTTCTTGGAA 1028
||||||| ||||||||||||||
Sbjct 1070 CTCCACCGTTGTCTTCTTGGAA 1091
> Ahg924984 jgi|Araly1|924984|scaffold_200545.1
Length=535
Score = 183 bits (99), Expect = 2e-45
Identities = 111/117 (95%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 922 TCTGAGCTTGAGACCATTGCCCAACCAGAGTCTGTGAAAGGAGAAAGATACATGGCCACA 981
|||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 399 TCTGAGCTCGAGACCATTTCCCAACCAGAGTCTGTGAAAGGAGAAAGATACATGGCCACA 458
Query 982 GTGCCAACCTTCAAAAACTCCGACACTCCACCATTGTCTTCTTGGAATGCTGTGTAA 1038
|||||||||||||| ||||||||||| ||||| |||| |||||||||||||||||||
Sbjct 459 GTGCCAACCTTCAAGAACTCCGACACACCACCGTTGTGTTCTTGGAATGCTGTGTAA 515
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 38618514921
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5