BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G60810.1
Length=1488
Score E
Sequences producing significant alignments: (Bits) Value
Ahg475250 jgi|Araly1|475250|fgenesh2_kg.2__380__AT1G60810.1 2194 0.0
Ahg471195 jgi|Araly1|471195|fgenesh2_kg.1__1149__AT1G10670.1 1605 0.0
Ahg919870 jgi|Araly1|919870|scaffold_101151.1 701 0.0
> Ahg475250 jgi|Araly1|475250|fgenesh2_kg.2__380__AT1G60810.1
Length=1453
Score = 2194 bits (1188), Expect = 0.0
Identities = 1389/1480 (94%), Gaps = 37/1480 (3%)
Strand=Plus/Plus
Query 14 GCTAACTAACGAAGCTGTAGCTA---C---C-TCCTCTCTCAACGTATGGCTCGGAAGAA 66
||| |||| |||||||||||||| | | |||||||||||||||||||||| |||||
Sbjct 1 GCTGACTACCGAAGCTGTAGCTACCTCTTTCATCCTCTCTCAACGTATGGCTCGCAAGAA 60
Query 67 GATCAGAGAGTATGACTCAAAGAGACTGGTGAAAGAACACTTCAAAAGACTCTCTGGTCA 126
|||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 61 GATCAGAGAGTATGACTCAAAGAGACTGGTGAAAGAACACTTCAAAAGGCTTTCTGGTCA 120
Query 127 AGAATTGCCTATCAGATCCGTTCAGATTAACCAAGAGACTGATCTAAATGAGCTAGTAGA 186
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 121 AGAATTGCCTATCAGATCCGTTCAGATTAACCAAGAGACTGATCTGAATGAGCTAGTAGA 180
Query 187 GAGAGAGCCTTGGCTCTCATCTGAGAAGCTTGTGGTGAAACCTGATATGTTGTTCGGAAA 246
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 GAGGGAGCCTTGGCTCTCATCTGAGAAGCTTGTGGTGAAACCTGATATGTTGTTCGGAAA 240
Query 247 GCGTGGCAAAAGCGGTTTGGTTGCATTGAACTTAGATTTCGCTGATGTTGCAACTTTCGT 306
|||||||||||||||||||||||| ||||| |||||||| ||||||||||| ||||||||
Sbjct 241 GCGTGGCAAAAGCGGTTTGGTTGCCTTGAAATTAGATTTTGCTGATGTTGCTACTTTCGT 300
Query 307 GAAAGAACGCTTAGGCAAAGAGGTAGAGATGAGTGGATGCAAAGGACCCATAACAACATT 366
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 301 GAAAGAACGGTTAGGCAAAGAGGTAGAGATGAGTGGATGCAAAGGACCCATAACAACGTT 360
Query 367 CATTGTTGAACCATTTGTCCCACACAATGAAGAGTTCTATCTTAATATTGTCTCTGATAG 426
||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct 361 TATTGTTGAACCATTTGTCCCACACAATGAGGAGTTTTATCTTAATATTGTCTCTGATAG 420
Query 427 ACTTGGCTGCAGCATTAGCTTTTCGGAGTGTGGAGGAATTGACATCGAGGAGAACTGGGA 486
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct 421 ACTTGGCTGCAGCATTAGCTTTTCGGAGTGTGGAGGTATCGACATCGAGGAGAACTGGGA 480
Query 487 CAAGGTCAAGACCATAACTATACCAACAGGTGCTTCCCTGACATTTGAGATATGTGCACC 546
|||||||||||||||| ||||||| || ||||||||||||||| |||| ||||||||||
Sbjct 481 CAAGGTCAAGACCATATCTATACCGACGGGTGCTTCCCTGACACCTGAGCTATGTGCACC 540
Query 547 TCTTGTTGCAACCCTTCCTCTAGAGATCAAAGGGGAACTTGAAGATTTTATTCAAGTCAT 606
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 541 TCTTGTTGCAACACTTCCTCTAGAGATCAAAGGGGAACTTGAAGATTTTATTCAAGTTAT 600
Query 607 TTTTACCCTATTCGAAGATCTTGATTTCACTTTCTTGGAGATGAATCCTTTCACATTGGT 666
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 601 TTTTACCTTATTCGAAGATCTTGATTTCACTTTCTTGGAGATGAATCCTTTCACATTGGT 660
Query 667 TGATGGAAAGCCTTATCCTCTGGATATGAGGGGTGAGCTTGATGACACCGCTGCTTTCAA 726
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 661 TGATGGAAAGCCTTATCCTCTAGATATGAGGGGTGAGCTTGATGACACCGCTGCTTTCAA 720
Query 727 AAACTTTAAGAAGTGGGGCGACATTGAATTTCCC-ATGCCATTTGGAAGAGTGATGAGTT 785
|||||||||||||||||| ||||||||| ||||| ||||||||||||||||| |||||||
Sbjct 721 AAACTTTAAGAAGTGGGGTGACATTGAA-TTCCCTATGCCATTTGGAAGAGTAATGAGTT 779
Query 786 CAACAGAGAGCTTCATCCACGGTCTAGATGAGAAGACAAGTGCCTCTTTGAAGTTCACTG 845
||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 780 CAACAGAAAGCTTCATCCACGGTCTAGATGAGAAGACAAGTGCGTCTTTGAAGTTCACTG 839
Query 846 TTCTGAATCCCAAGGGAAGAATTTGGACTATGGTAGCTGGAGGAGGTGCAAGTGTCATCT 905
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 840 TTCTGAATCCCAAGGGAAGGATTTGGACTATGGTAGCTGGAGGAGGTGCAAGTGTCATCT 899
Query 906 ATGCTGATACCGTTGGAGATCTCGGGTATGCATCTGAGCTTGGCAATTATGCTGAATACA 965
|||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 900 ATGCCGATACCGTTGGAGATCTCGGGTATGCATCTGAGCTTGGAAATTATGCTGAATACA 959
Query 966 GTGGAGCACCCAAAGAAGACGAGGTTTTGCAGTATGCCAGAGTTGTCATTGATTGTGCTA 1025
|||||||||||||||||||||||||||||||||| || ||||| ||||| ||||||||||
Sbjct 960 GTGGAGCACCCAAAGAAGACGAGGTTTTGCAGTACGCGAGAGTCGTCATCGATTGTGCTA 1019
Query 1026 CAGCGAATCCGGATGGAAAAAGCAGGGCTCTGGTAATTGGAGGTGGAATTGCTAACTTCA 1085
|||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||||||
Sbjct 1020 CAGCGAATCCGGATGGAAAAAGTAGAGCTCTGGTAATCGGAGGAGGAATTGCTAACTTCA 1079
Query 1086 CCGATGTTGCTGCTACCTTCAATGGCATAATCCGAGCTCTCAAGGAAAAAGAAGCAAAGC 1145
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1080 CCGATGTTGCTGCTACCTTCAATGGCATAATCCGAGCTCTCAAGGAAAAGGAAGCAAAGC 1139
Query 1146 TGAAAGCAGCAAGGATGCATATATTTGTGAGGAGAGGAGGACCAAACTACCAAAAGGGAC 1205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1140 TGAAAGCAGCAAGGATGCATATATTTGTGAGGAGAGGAGGACCAAACTACCAAAAGGGAC 1199
Query 1206 TTGCTAAAATGAGATCACTTGGAGACGAAATCGGTGTCCCCATCGAGGTGTATGGTCCTG 1265
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1200 TTGCTAAAATGAGATCACTTGGAGATGAAATCGGTGTCCCCATCGAGGTGTATGGTCCTG 1259
Query 1266 AAGCAACAATGACAGGTATATGCAAGGAGGCAATCCAGTACATCACAGCGGCTGCATAAG 1325
||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct 1260 AAGCAACAATGACAGGTATCTGCAAGGAGGCAATCCAGTACATCACCGCGGCTGCATAAG 1319
Query 1326 CCTTTACAATCTTATCACTTACTTTCAAAATACTCTTTAGCGTCTCTTGAGTTTGAGACG 1385
||||||||||||||||| |||||||||||||| |||| | | | ||||| |
Sbjct 1320 CCTTTACAATCTTATCAGTTACTTTCAAAATATTCTT--G--T-----G--TTTGA--C- 1365
Query 1386 TGTTTGGATTATGTTTCACTTCTAA-TGTATCTTACTATTCATAAATAA-AGAACAAGTA 1443
| | || ||||||| ||||| ||| ||||||||||||||||||| | ||||||||
Sbjct 1366 T-T----AT---GTTTCACCTCTAAATGTTTCTTACTATTCATAAATAATA-AACAAGTA 1416
Query 1444 TCTTCTTTTTTCTTACTTGGTATTTTCTCTTTTGATTCTC 1483
||||||||||| || |||||||||||||||||||||
Sbjct 1417 TCTTCTTTTTT---ACAAAGTATTTTCTCTTTTGATTCTC 1453
> Ahg471195 jgi|Araly1|471195|fgenesh2_kg.1__1149__AT1G10670.1
Length=1662
Score = 1605 bits (869), Expect = 0.0
Identities = 1147/1282 (89%), Gaps = 16/1282 (1%)
Strand=Plus/Plus
Query 53 ATGGCTCGGAAGAAGATCAGAGAGTATGACTCAAAGAGACTGGTGAAAGAACACTTCAAA 112
||||| |||||||||| ||||||||||||||||||||| ||||||| ||||||||||||
Sbjct 198 ATGGCGAGGAAGAAGATTAGAGAGTATGACTCAAAGAGATTGGTGAAGGAACACTTCAAA 257
Query 113 AGACTCTCTGGTC-AAGA-ATTGCCTATCAGATCCGTTCAGATTAA-CCAAGAGACTGAT 169
|| || ||||| | |||| || ||||||||||||||||||||||| || | ||||||
Sbjct 258 AGGCTTTCTGG-CAAAGAGCTT-CCTATCAGATCCGTTCAGATTAATGAAACA-ACTGAT 314
Query 170 CTAAATGAGCTAGTAG-AGAGAGAGCCTTGGCTCTCATCTGAGAAGCTTGTGGTGAAACC 228
||||||||| |||| | | || |||||||||||||| || |||||||| |||||||||||
Sbjct 315 CTAAATGAGGTAGTTGAAAAG-GAGCCTTGGCTCTCGTCCGAGAAGCTGGTGGTGAAACC 373
Query 229 TGATATGTTGTTCGGAAAGCGTGGCAAAAGCGGTTTGGTTGCATTGAACTTAGATTTCGC 288
||| |||||||| |||||||||||||| || ||||||||||| ||||| |||||||| ||
Sbjct 374 TGACATGTTGTTTGGAAAGCGTGGCAAGAGTGGTTTGGTTGCCTTGAAATTAGATTTTGC 433
Query 289 TGATGTTGCAACTTTCGTGAAAGAACGCTTAGGCAAAGAGGTAGAGATGAGTGGATGCAA 348
||||||||| ||||| |||||||| || || |||||||||||||||||||||||||||||
Sbjct 434 TGATGTTGCCACTTTTGTGAAAGACCGTTTGGGCAAAGAGGTAGAGATGAGTGGATGCAA 493
Query 349 AGGACCCATAACAACATTCATTGTTGAACCATTTGTCCCACACAATGAAGAGTTCTATCT 408
||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||
Sbjct 494 AGGACCCATAACAACATTCATAGTTGAACCATTTGTTCCACACAATGAAGAGTTTTATCT 553
Query 409 TAATATTGTCTCTGATAGACTTGGCTGCAGCATTAGCTTTTCGGAGTGTGGAGGAATTGA 468
|||| ||||||| ||| | ||||| |||||||| |||||||| ||||| |||||||||||
Sbjct 554 TAATGTTGTCTCGGATCGGCTTGGGTGCAGCATAAGCTTTTCAGAGTGCGGAGGAATTGA 613
Query 469 CATCGAGGAGAACTGGGACAAGGTCAAGACCATAACTATACCAACAGGTGCTTCCCTGAC 528
||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||
Sbjct 614 GATCGAGGAGAACTGGGACAAGGTCAAGACTATATTTTTACCAACAGGTGCTTCCCTGAC 673
Query 529 ATTTGAGATATGTGCACCTCTTGTTGCAACCCTTCCTCT-AGAGATCAAAGGGGAACTTG 587
| ||| ||||||||||||||||| ||||| ||||| || ||||||||||| || |||
Sbjct 674 ACCTGAAATATGTGCACCTCTTGTGGCAACTCTTCC-CTTAGAGATCAAAGCTCAAATTG 732
Query 588 AAGATTTTATTCAA-GTCATTTTTACCCTATTCGAAGATCTTGATTTCACTTTCTTGGAG 646
|||| ||||| ||| |||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct 733 AAGAATTTAT-CAAAGTCATTTTCACCCTATTCCAAGATCTTGATTTCACTTTCTTGGAG 791
Query 647 ATGAATCCTTTCACAT-TGGTTGATGGAAAG-CCTTATCCTCTGGATATGAGGGGTGAGC 704
|||||||||||||| | | |||||||||| | ||||||||||||||||||||||||||||
Sbjct 792 ATGAATCCTTTCAC-TCTAGTTGATGGAA-GTCCTTATCCTCTGGATATGAGGGGTGAGC 849
Query 705 TTGATGACACCGCTGCTTTCAAAAACTTTAAGAAGTGGGGCGACATTGAATTTCCCATGC 764
||||||| || || || |||||||||||||| || |||||||||||||||||||| ||||
Sbjct 850 TTGATGATACTGCCGCCTTCAAAAACTTTAAAAAATGGGGCGACATTGAATTTCCTATGC 909
Query 765 CATTTGGAAGAGTGATGAGTTCAACAGAGAGCTTCATCCACGGTCTAGATGAGAAGACAA 824
||||||||||||| |||||| | ||||| ||||| ||||| || || |||||||||||||
Sbjct 910 CATTTGGAAGAGTAATGAGTGCCACAGAAAGCTTTATCCATGGACTGGATGAGAAGACAA 969
Query 825 GTGCCTCTTTGAAGTTCACTGTTCTGAATCCCAAGGGAAGAATTTGGACTATGGTAGCTG 884
|||| ||||||||||| || |||||||| ||||||||| | |||||||| ||||||||||
Sbjct 970 GTGCGTCTTTGAAGTTTACCGTTCTGAACCCCAAGGGACGGATTTGGACAATGGTAGCTG 1029
Query 885 GAGGAGGTGCAAGTGTCATCTATGCTGATACCGTTGGAGATCTCGGGTATGCATCTGAGC 944
| ||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||| |
Sbjct 1030 GTGGAGGAGCAAGTGTCATCTATGCGGATACTGTTGGAGATCTCGGGTATGCATCTGAAC 1089
Query 945 TTGGCAATTATGCTGAATACAGTGGAGCACCCAAAGAAGACGAGGTTTTGCAGTATGCCA 1004
||||||| ||||||||||| |||||||||||||||||||| |||||||||||||| ||||
Sbjct 1090 TTGGCAACTATGCTGAATATAGTGGAGCACCCAAAGAAGATGAGGTTTTGCAGTACGCCA 1149
Query 1005 GAGTTGTCATTGATTGTGCTACAGCGAATCCGGATGGAAAAAGCAGGGCTCTGGTAATTG 1064
|||| || ||||| ||||||||||| || || |||||||||||||| ||||| || ||||
Sbjct 1150 GAGTCGTTATTGACTGTGCTACAGCAAACCCTGATGGAAAAAGCAGAGCTCTTGTGATTG 1209
Query 1065 GAGGTGGAATTGCTAACTTCACCGATGTTGCTGCTACCTTCAATGGCATAATCCGAGCTC 1124
| ||||||||||| |||||||| |||||||||||||| ||||||||||||||||| ||||
Sbjct 1210 GGGGTGGAATTGCCAACTTCACTGATGTTGCTGCTACTTTCAATGGCATAATCCGCGCTC 1269
Query 1125 TCAAGGAAAAAGAAGCAAAGCTGAAAGCAGCAAGGATGCATATATTTGTGAGGAGAGGAG 1184
| || ||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct 1270 TTAAAGAAAAGGAAGCAAAGCTGAAAGCAGCAAGGATGCATATTTTTGTGAGGAGGGGAG 1329
Query 1185 GACCAAACTACCAAAAGGGACTTGCTAAAATGAGATCACTTGGAGACGAAATCGGTGTCC 1244
|||||||||||||||||||||||||||||||| || | |||||||| |||||||||||||
Sbjct 1330 GACCAAACTACCAAAAGGGACTTGCTAAAATGCGAGCCCTTGGAGATGAAATCGGTGTCC 1389
Query 1245 CCATCGAGGTGTATGGTCCTGAAGCAACAATGACAGGTATATGCAAGGAGGCAATCCAGT 1304
|||||||||| |||||||| |||||||| ||||||||||| ||||||||||| |||||||
Sbjct 1390 CCATCGAGGTCTATGGTCCAGAAGCAACCATGACAGGTATCTGCAAGGAGGCCATCCAGT 1449
Query 1305 ACATCACAGCGGCTGCATAAGC 1326
|||||||||| || ||||||||
Sbjct 1450 ACATCACAGCAGCAGCATAAGC 1471
> Ahg919870 jgi|Araly1|919870|scaffold_101151.1
Length=1228
Score = 701 bits (379), Expect = 0.0
Identities = 519/585 (89%), Gaps = 16/585 (3%)
Strand=Plus/Plus
Query 126 AAGAA-TTGCCTATCAGATCCGTTCAGATTAA-CCAAGAGACTGATCTAAATGAGCTAGT 183
||||| || ||||||||||||||||||||||| || | ||||||||||||||||||||
Sbjct 55 AAGAACTT-CCTATCAGATCCGTTCAGATTAATGAAACA-ACTGATCTAAATGAGCTAGT 112
Query 184 AG-AGAGAGAGCCTTGGCTCTCATCTGAGAAGCTTGTGGTGAAACCTGATATGTTGTTCG 242
| | || |||||||||||||| || |||||||| |||||||||||||| |||||||| |
Sbjct 113 TGAAAAG-GAGCCTTGGCTCTCGTCCGAGAAGCTGGTGGTGAAACCTGACATGTTGTTTG 171
Query 243 GAAAGCGTGGCAAAAGCGGTTTGGTTGCATTGAACTTAGATTTCGCTGATGTTGCAACTT 302
||||||||||||| || ||||||||||| ||||| |||||||| ||||||||||| ||||
Sbjct 172 GAAAGCGTGGCAAGAGTGGTTTGGTTGCCTTGAAATTAGATTTTGCTGATGTTGCCACTT 231
Query 303 TCGTGAAAGAACGCTTAGGCAAAGAGGTAGAGATGAGTGGATGCAAAGGACCCATAACAA 362
| |||||||| || || |||||||||||||||||||||||||||||||||||||||||||
Sbjct 232 TTGTGAAAGACCGTTTGGGCAAAGAGGTAGAGATGAGTGGATGCAAAGGACCCATAACAA 291
Query 363 CATTCATTGTTGAACCATTTGTCCCACACAATGAAGAGTTCTATCTTAATATTGTCTCTG 422
||||||| ||||| |||||||| ||||||||||| ||||| ||||||||| ||||||| |
Sbjct 292 CATTCATAGTTGAGCCATTTGTTCCACACAATGAGGAGTTTTATCTTAATGTTGTCTCGG 351
Query 423 ATAGACTTG-GCTGCAGCATTAGCTTTTCGGAGTGTGGAGGAATTGACATCGAGGAGAAC 481
|| | ||| | |||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct 352 ATCGGCTTTTG-TGCAGCATAAGCTTTTCAGAGTGTGGAGGAATTGAGATCGAGGAGAAC 410
Query 482 TGGGACAAGGTCAAGACCATAACTATACCAACAGGTGCTTCCCTGACATTTGAGATATGT 541
||||||||||||||||| ||| | ||||||||||||||||||||||| ||| ||||||
Sbjct 411 TGGGACAAGGTCAAGACAATATTTTTACCAACAGGTGCTTCCCTGACACCTGAAATATGT 470
Query 542 GCACCTCTTGTTGCAACCCTTCCTCT-AGAGATCAAAGGGGAACTTGAAGATTTTATTCA 600
|||||||| || ||||| ||||| || ||||||||||| ||| ||||||| ||||| ||
Sbjct 471 GCACCTCTAGTGGCAACTCTTCC-CTTAGAGATCAAAGCTGAAATTGAAGAATTTAT-CA 528
Query 601 A-GTCATTTTTACCCTATTCGAAGATCTTGATTTCACTTTCTTGGAGATGAATCCTTTCA 659
| |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 529 AAGTCATTTTCACCCTATTCCAAGATCTTGATTTCACTTTCTTGGAGATGAATCCTTTCA 588
Query 660 CAT-TGGTTGATGGAAAG-CCTTATCCTCTGGATATGAGGGGTGA 702
| | | |||||||||| | ||||||||||||||||||||||||||
Sbjct 589 C-TCTAGTTGATGGAA-GTCCTTATCCTCTGGATATGAGGGGTGA 631
Score = 667 bits (361), Expect = 0.0
Identities = 523/598 (87%), Gaps = 24/598 (4%)
Strand=Plus/Plus
Query 736 GAAGTGGGGCGACATTGAATTTCCCATGCCATTTGGAAGAGTGATGAGTTCAACAGAGAG 795
||| |||||||||||| ||||||| ||||||||||||||||| |||||| | ||| | ||
Sbjct 630 GAA-TGGGGCGACATTAAATTTCCTATGCCATTTGGAAGAGTAATGAGTCCGACAAAAAG 688
Query 796 CTTCATCCACGGTCTAGATGAG-A-A-GACAAGTGCCTCTTTGAAGTTCACTGTTCTGAA 852
||| |||||| | ||||||||| | | ||||||||| ||||||||||| || ||||||||
Sbjct 689 CTTTATCCACAGACTAGATGAGAAGACGACAAGTGCGTCTTTGAAGTTTACCGTTCTGAA 748
Query 853 TCCCAAGGGAAGAATTTGGACTATGGTAGCTGGAGGAGGTGCAAGTGTCATCTATGCTGA 912
||||||||| | |||||||| ||||||||||| ||||| ||||| ||||||||||| ||
Sbjct 749 CCCCAAGGGACGGATTTGGACAATGGTAGCTGGTGGAGGAGCAAGGGTCATCTATGCGGA 808
Query 913 TACCGTTGGAGATCTCGGGTATGCATCTGAGCTTGGCAATTATGCTGAATACAGTGGAGC 972
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||
Sbjct 809 TACCGTTGGAGATCTCGGGTATGCATCTGAACTTGGCAACTATGCTGAATACAGTGGCGC 868
Query 973 ACCCAAAGAAGACGAGGTTTTGCAGTATGCCAGAGTTGTCATTGATTGTGCTACAGCGAA 1032
|||||||||||| |||||||||||||| | ||||| || || |||||||||||||| ||
Sbjct 869 ACCCAAAGAAGATGAGGTTTTGCAGTACACAAGAGTAGTTATAGATTGTGCTACAGCAAA 928
Query 1033 TCCGGATGGAAAAAGCAGGGCTCTGGTAATTGGAGGTGGAATTGCTAACTTCACCGATGT 1092
||||||||||||||||| ||||| || ||||| ||||||||||| |||||||| |||||
Sbjct 929 CCCGGATGGAAAAAGCAGAGCTCTTGTGATTGGGGGTGGAATTGCCAACTTCACTGATGT 988
Query 1093 TGCTGC-TAC--CTT-CAATGGCATAATCCGAGCTCTCAAGGAAAAAGAAGCAAAGCTGA 1148
|||||| | | ||| ||||||||||||||| | | || | |||||||||
Sbjct 989 TGCTGCCTGCTACTTTCAATGGCATAATCCG--C------G-AA---G---CAAAGCTGA 1033
Query 1149 AAGCAGCAAGGATGCATATATTTGTGAGGAGAGGAGGACCAAACTACCAAAAGGGACTTG 1208
|||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct 1034 AAGCAGCAAGGATGCATATATTTGTGAGAAGAGGAGGACCAAACTACCAAA-GGGACTTG 1092
Query 1209 CTAAAATGAGATCACTTGGAGACGAAATCGGTGTCCCCATCGAGGTGTATGGTCCTGAAG 1268
|||||||| || | |||||||| ||||||||||||||||||||||| |||||||| ||||
Sbjct 1093 CTAAAATGCGAGCCCTTGGAGATGAAATCGGTGTCCCCATCGAGGTCTATGGTCCAGAAG 1152
Query 1269 CAACAATGACAGGTATATGCAAGGAGGCAATCCAGTACATCACAGCGGCTGCATAAGC 1326
|||| ||||||||||| ||||||||||||||||||||||||||||| || ||||||||
Sbjct 1153 CAACCATGACAGGTATCTGCAAGGAGGCAATCCAGTACATCACAGCAGCAGCATAAGC 1210
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 55687938190
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5