BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G61360.1
Length=2647
Score E
Sequences producing significant alignments: (Bits) Value
Ahg475187 jgi|Araly1|475187|fgenesh2_kg.2__317__AT1G61360.1 4041 0.0
Ahg475181 jgi|Araly1|475181|fgenesh2_kg.2__311__AT1G61420.1 946 0.0
Ahg907303 jgi|Araly1|907303|Al_scaffold_0002_384 723 0.0
Ahg475185 jgi|Araly1|475185|fgenesh2_kg.2__315__AT1G61380.1 686 0.0
Ahg907313 jgi|Araly1|907313|Al_scaffold_0002_394 564 1e-159
Ahg907312 jgi|Araly1|907312|Al_scaffold_0002_393 540 2e-152
> Ahg475187 jgi|Araly1|475187|fgenesh2_kg.2__317__AT1G61360.1
Length=2599
Score = 4041 bits (2188), Expect = 0.0
Identities = 2474/2612 (95%), Gaps = 20/2612 (1%)
Strand=Plus/Plus
Query 38 TCAACATGCGTATTGTTGCATGCTTGCTCTTGATAACAGCCT-TATTCTCAAGCTATGGC 96
|||| |||| ||||||||||||||| |||||||||||| || |||| ||||| | | ||
Sbjct 1 TCAAGATGCTTATTGTTGCATGCTTCCTCTTGATAACA-ACTATATTTTCAAGTTGTTGC 59
Query 97 TATGCAGCTATTACCACGTCAAGTCCTTTGTC-GATAGGGGTAACTTTGAGCTCTCCTGG 155
||||||||||| ||||| |||||||||||||| | |||| |||| |||||||||||||
Sbjct 60 TATGCAGCTATAACCACATCAAGTCCTTTGTCTG-TAGGACAAACTCTGAGCTCTCCTGG 118
Query 156 TGGATCATATGAGCTTGGTTTCTTCAGTTCTAACAACTCTGGGAATCAGTATGTTGGAAT 215
|||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct 119 TGGAGCATATGAGCTTGGCTTCTTCAGTTCTAACAATTCTGGGAATCAGTATGTTGGAAT 178
Query 216 CTGGTTCAAGAAAGTCACTCCTCGGGTTATTGTTTGGGTGGCTAACAGAGAAAAGCCAGT 275
|||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||
Sbjct 179 CTGGTTCAAGAAAGTCGCTCCTCGGGTTATTGTTTGGGTGGCTAATAGAGAAAAACCAGT 238
Query 276 CTCTAGTACTATGGCGAATCTCACAATCAGCAGCAATGGAAGTCTTATCTTGCTTGATAG 335
||| || | | |||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 239 CTCGAGCCCCACGGCGAATCTCACAATCAGCAGCAATGGAAGTCTTATCTTGCTTGAT-G 297
Query 336 CAAAA-AAGAT-CTGGTGTGGTCATCTGGAGGAGATCCCACATCTAACAAGTGTCGTGCT 393
|||| ||||| || ||||||||| |||||||||||||||||||||| |||||||||||
Sbjct 298 GAAAACAAGATCCT-GTGTGGTCAGCTGGAGGAGATCCCACATCTAATAAGTGTCGTGCC 356
Query 394 GAGCTTTTAGACACCGGAAATCTTGTCGTCGTAGATAATGTTACTGGAAATTATTTGTGG 453
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 357 GAGCTTTTAGACACCGGAAATCTTGTCGTTGTAGATAATGTTACTGGAAATTATTTGTGG 416
Query 454 CAAAGTTTTGAGCATCTTGGTGATACAATGCTACCTCTTACATCTCTCATGTACGATATT 513
|||||||||||||||||||||||||| ||| |||||||||||||||| ||||| ||||||
Sbjct 417 CAAAGTTTTGAGCATCTTGGTGATACTATGTTACCTCTTACATCTCTGATGTATGATATT 476
Query 514 CCTAACAACAAGAAACGTGTGCTGACTTCTTGGAAGAGTGAGACCGATCCATCGCCTGGG 573
||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct 477 CCTAACAACAAGAAACGTGTGCTGACTTCTTGGAAAAGTGAGACTGATCCATCGCCTGGG 536
Query 574 GAGTTTGTAGCTGAGATTACACCACAAGTACCCTCGCAAGGCCTTATAAGGAAAGGCTCG 633
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 537 GAGTTTGTAGCTGAGATTACACCACAAGTACCCTCGCAAGGCGTTATAAGGAAAGGCTCG 596
Query 634 TCACCTTATTGGAGAAGCGGTCCATGGGCGGGAACAAGGTTCACTGGGATACCAGAAATG 693
||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 597 TCACCCTATTGGAGAAGCGGTCCATGGGCGGGTACAAGGTTCACTGGGATACCAGAAATG 656
Query 694 GATGCATCGTATGTGAATCCATTGGGAATGGTCCAAGATGAAGTCAACGGCACAGGAGTT 753
|||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 657 GATGAATCATATGTGAATCCATTGGGAATGGTCCAAGATGTAGTCAACGGCACAGGAGTT 716
Query 754 TTCGCTTTTTGTGTTCTGAGAAATTTCAATTTGTCATACATCAAGCTAACGC-CAGAAGG 812
||||||||||||||| | ||||||||||||||||| ||||||||| |||| | || | ||
Sbjct 717 TTCGCTTTTTGTGTTTTAAGAAATTTCAATTTGTCGTACATCAAGTTAAC-CTCACAGGG 775
Query 813 ATCATTGAGGATTAC-ACGGAATAATGGAACCGACTGGATCAAGCACTTTGAGGGTCCGC 871
||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 776 ATCATTGAGGATT-CAACGGAATAATGGAACTGACTGGATCAAGCACTTTGAGGGTCCGC 834
Query 872 TAACCTCGTGTGATCTATATGGTAGATGTGGACCTTTTGGCTTGTGTGTGAGATCCGGTA 931
||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct 835 TAAGCTCGTGTGATCTCTATGGTAGATGTGGACCTTATGGCTTGTGTGTGAGATCCGGTG 894
Query 932 CTCCAATGTGCCAATGCTTAAAAGGGTTCGAACCAAAATCAGATGAGGAGTGGAGAAGTG 991
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 895 CTCCAATGTGCCAATGCTTAAAAGGGTTCGAACCAAAATCAGATGAGGAGTGGAGAAGTG 954
Query 992 GGAATTGGAGTCGTGGATGTGTGAGACGCACAAACTTATCTTGTCAAGGAAACTCTTCTG 1051
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 955 GGAATTGGAGTCGTGGATGTGTGAGACGCACAAACTTATCTTGTCAAGGAAATTCTTCTG 1014
Query 1052 TAGAAACGCAGGGCAAGGACAGAGACGTATTCTATCATGTATCCAACATAAAGCCTCCAG 1111
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct 1015 TAGAAACGCAGGGCAAGGACAGAGACGTCTTCTATCATGTATCCAACATAAAGCCTCCGG 1074
Query 1112 ATTCATACGAATTAGCAAGCTTTAGCAATGAAGAACAATGCCACCAAGGCTGTCTCAGGA 1171
|||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1075 ATTCTTACGAATTAGCAAGCTTTAGCAATGAAGAAGAATGCCACCAAGGCTGTCTCAGGA 1134
Query 1172 ACTGTTCTTGCACAGCCTTTTCCTATGTCAGTGGAATAGGATGTTTGGTGTGGAACCAGG 1231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1135 ACTGTTCTTGCACAGCCTTTTCCTATGTCAGTGGAATAGGATGTTTGGTGTGGAACCGGG 1194
Query 1232 AGCTGTTGGACACAGTGAAATTTATTGGCGGAGGAGAGACTCTTTCCCTTCGTCTTGCAC 1291
|||| || |||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1195 AGCTATTAGACACAGTGAAATTTATTTCCGGAGGAGAGACTCTTTCCCTTCGTCTTGCAC 1254
Query 1292 ATTCTGAATTGACTGGAAGAAAGCGAATCAAGATTATCACTGTTGCCACTCTCAGCCTTT 1351
||| |||||| ||||||||||||||||||||||| |||||| ||| |||||||||||| |
Sbjct 1255 ATTTTGAATTAACTGGAAGAAAGCGAATCAAGATGATCACTATTGGCACTCTCAGCCTCT 1314
Query 1352 CTGTTTGCTTGATTTTGGTGCTTGTTGCATGTGGGTGCTGGAGATACAGAGTAAAACAAA 1411
|||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct 1315 CTGTTTGCTTGATTTTGGTGCTTGTTGCATATGGGTGTTGGAGATACAGAGTAAAACAAA 1374
Query 1412 ATGGTTCAAGTCTTGTATCCAAAGACAATGTAGAAGGCGCTTGGAAGAGTGATTTACAAT 1471
||||||| | ||||||||||||||| |||||||||||| |||||||||||||||| || |
Sbjct 1375 ATGGTTCTATTCTTGTATCCAAAGATAATGTAGAAGGCTCTTGGAAGAGTGATTTGCAGT 1434
Query 1472 CACAAGATGTCTCAGGTTTAAATTTCTTTGAGATTCATGACCTACAAACCGCCACGAATA 1531
||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 1435 CACAAGATGTCTCAGGTTTAAATTTCTTTGAGATTCATGACCTCCAAACTGCCACGAATA 1494
Query 1532 ATTTCAGCGTGTTAAATAAACTCGGTCAGGGTGGATTTGGTACGGTTTATAAGGGGAAGC 1591
| |||||||||||||||||||||||||||||||| || || || ||||||||||||||||
Sbjct 1495 AGTTCAGCGTGTTAAATAAACTCGGTCAGGGTGGGTTCGGGACAGTTTATAAGGGGAAGC 1554
Query 1592 TTCAGGACGGAAAGGAAATAGCTGTAAAACGTCTTACTAGCAGCTCTGTACAGGGCACAG 1651
|||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||
Sbjct 1555 TTCAGGACGGAAAGGAAATAGCAGTAAAACGTCTTTCTAGCAGCTCTGTACAGGGCACAG 1614
Query 1652 AGGAGTTCATGAACGAGATAAAACTCATCTCGAAATTACAACACAGAAACTTGCTTCGGC 1711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1615 AGGAGTTCATGAACGAGATAAAACTCATCTCGAAATTACAACACAGAAACTTGCTTCGGC 1674
Query 1712 TTTTGGGATGCTGCATCGATGGAGAAGAGAAGCTATTGGTCTATGAATATATGGTGAACA 1771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1675 TTTTGGGATGCTGCATCGATGGAGAAGAGAAGCTATTGGTCTATGAATATATGGTGAACA 1734
Query 1772 AAAGCCTTGATATCTTTATATTTGATTTGAAGAAAAAGCTTGAGATTGATTGGGCTACGA 1831
||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct 1735 AAAGCCTTGATATTTTTATATTTGATTTGAAGAAAAAGCTTGAGATTGATTGGCCTATGA 1794
Query 1832 GATTCAATATCATTCAAGGAATCGCTCGTGGACTTCTCTATCTCCATCGTGACTCATTCC 1891
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1795 GATTCAATATCATTCAAGGAATTGCTCGTGGACTTCTCTATCTCCATCGTGACTCATTCC 1854
Query 1892 TCAGAGTTGTACACCGCGATCTGAAGGTCAGCAATATTCTCTTGGATGAGAAAATGAACC 1951
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1855 TCAGAGTTGTACACCGCGATTTGAAGGTCAGCAATATTCTCTTGGATGAGAAAATGAACC 1914
Query 1952 CAAAAATATCGGATTTTGGATTGGCTCGGCTGTTTCATGGAAATCAACATCAAGACAGCA 2011
|||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||
Sbjct 1915 CAAAAATATCAGATTTTGGATTGGCTCGGATGTTTCATGGCAATCAACATCAAGACAGCA 1974
Query 2012 CTGGTAGTGTTGTAGGCACTCTAGGATACATGTCTCCCGAGTATGCTTGGACTGGTACGT 2071
|||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1975 CTGGTAGTGTCGTAGGCACTCTAGGATACATGTCTCCCGAGTATGCTTGGACTGGGACGT 2034
Query 2072 TCTCTGAAAAATCCGACATTTACAGCTTCGGAGTTCTGATGCTCGAAATCATCACTGGCA 2131
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2035 TCTCTGAAAAATCCGACATTTACAGCTTCGGAGTTCTGATGCTCGAAATCATCACCGGCA 2094
Query 2132 AGGAGATTTCAAGTTTCAGCTATGGCAAAGATAACAAAAACCTTCTTTCATATGCATGGG 2191
||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||
Sbjct 2095 AGGAGATTTCAAGTTTCAGCTATGGCATAGATAAGAAAAACCTTCTGTCATATGCATGGG 2154
Query 2192 ACTCGTGGAGCGAAAACGGGGGAGTGAATCTACTGGACCAAGATCTTGATGATTCTGATT 2251
|||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2155 ACTCTTGGAGCGAAAACGGGGGAGTGAATCTACTGGACCAAGATCTTGCTGATTCTGATT 2214
Query 2252 CAGTTAATTCAGTTGAAGCAGGAAGATGTGTTCATATTGGTCTGCTCTGTGTTCAGCATC 2311
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2215 TAGTTAATTCAGTTGAAGTGGGAAGATGTGTTCATATTGGTCTGCTCTGTGTTCAGCATC 2274
Query 2312 AAGCTATTGATAGACCAAACATCAAACAAGTTATGTCAATGCTGACTTCAACAACGGATC 2371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2275 AAGCTATTGATAGACCAAACATCAAACAAGTTATGTCAATGCTGACTTCAACAACGGATC 2334
Query 2372 TTCCTAAGCCAACACAACCAATGTTTGTATTGGAGACAAGTGATGAGGATTCTTCTCTGT 2431
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 2335 TTCCTAAGCCAACACAACCAATGTTTGTATTGGACACAAGTGATGAGGATTCTTCTCTGT 2394
Query 2432 CTCACTCTCAACGCTCCAATGATCTCTCCTCTGTTGATGAAAACAAATCTTCTGAAG-AG 2490
|||| | |||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct 2395 CTCA-----A-CGCTCCAATGATCTCTCCTCTGTTGATGAAAACAAATCTTCT-AAGGAG 2447
Query 2491 CTAAATGCTTCCTCATGAATGTTCCAATCGGATTCGTTCACGTGGACTTGCGTTGTTTTG 2550
|||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||
Sbjct 2448 CTAAATGCTTCCTCATGAATGTTCCAGTCGGATTCTTTCACGTGGACTTGCATTGTTTTT 2507
Query 2551 TACAAATTGTCAGTTGTGGAATAAATCAGTGATGTAAATTGGCTTCATAATCTGTAAATT 2610
|||||||||||| || |||||||||||| | |||||||||||| ||||||||||||||||
Sbjct 2508 TACAAATTGTCAATTTTGGAATAAATCAATTATGTAAATTGGCCTCATAATCTGTAAATT 2567
Query 2611 TACATTTACCCTTCTCTTATAAACCTTTTTAA 2642
||||||||| || || ||||||||||||||||
Sbjct 2568 TACATTTACTCTCCTGTTATAAACCTTTTTAA 2599
> Ahg475181 jgi|Araly1|475181|fgenesh2_kg.2__311__AT1G61420.1
Length=2536
Score = 946 bits (512), Expect = 0.0
Identities = 1790/2385 (75%), Gaps = 175/2385 (7%)
Strand=Plus/Plus
Query 118 AGTCCTTTGTCGATAGGGGTAACTTTGAGCTCTCCTGGTGGAT-CATATGAGCTTGGTTT 176
||||||||||| ||||| |||| | |||||| || ||| | ||||| || || ||
Sbjct 97 AGTCCTTTGTCAATAGGACAAACTCTCAGCTCTTCTAATGG-TGTTTATGAACTGGGATT 155
Query 177 CTTCAGTTCTAACAACTCTGGGAATCAGTATGTTGGAATCTGGTTCAA-GAAAGTCACTC 235
||||||| |||| ||||| ||||||||||| |||||||||||||| | | ||| ||
Sbjct 156 CTTCAGTCCTAATAACTCCCAAAATCAGTATGTCGGAATCTGGTTCAAGGGTA-TCATTC 214
Query 236 CTCGGGTTATTGTTTGGGTGGCTAACAGAGAAAAGCCAGTCT-CTAG-TACTATGGCGAA 293
| ||||| |||| |||||||| || |||||||| || || | | || | | | ||| ||
Sbjct 215 CCCGGGTGGTTGTGTGGGTGGCCAATAGAGAAAATCCTGT-TAC-AGATTCCACGGCAAA 272
Query 294 TCTCACAATCAGCAGCAATGGAAGTCTTATCTTGCTTGATAGCAAAAAAGATCTGGTGTG 353
|||| | ||||||| |||||||| |||| | || || || ||||| | | | | | ||
Sbjct 273 TCTCGCTATCAGCAACAATGGAAATCTTCTGTTATTTAATGGCAAAGATGGTGTTGCATG 332
Query 354 GT-CATCTGGAGGAGATCCCACATCTAACAAGTGTCGTGCTGAGCTTTTAGACACCGGAA 412
|| || ||||| || || | |||||| || |||||| |||||| |||||||||||
Sbjct 333 GTCCA-GTGGAGAAGCTCTTGCTTCTAACGGGTCTCGTGCAGAGCTTACAGACACCGGAA 391
Query 413 ATCTTGTCGTCGTAGATAATGTTACTGGAAATTA-TTTGTGGCAAAGTTTTGAGCATCTT 471
||||| | ||| |||| ||| || | || || | | | |||||||| ||||| ||||||
Sbjct 392 ATCTTATTGTCATAGACAATTTTTCAGG-AAGAACTCTATGGCAAAGCTTTGACCATCTT 450
Query 472 GGTGATACAATGCTACCTCT-TACATCTCTCATGTACGATA-TTC-CTAAC-AACAAGAA 527
|||||||| ||||| ||||| | || |||| | ||| | | || | || | ||||
Sbjct 451 GGTGATACTATGCTCCCTCTCT-CAACTCTGAAGTA-TA-ACCTCGC-CACTGGCGAGAA 506
Query 528 AC-GTGTGCTGACTTCTTGGAAGAGTGAGACCGATCCATCGCCTGGGGAGTTTGTAGC-T 585
| | ||| ||| |||||||| ||| | || |||||||||| ||| || ||||| || |
Sbjct 507 GCAG-GTGTTGAGGTCTTGGAAAAGTTACACTGATCCATCGCTTGGCGACTTTGT-GCTT 564
Query 586 GAGATTACACCACAAGTACCCTCGCAAGG-CCTTATAAGGAAAGGCTCGTCACCTTATTG 644
|||||||||| ||||| || | | ||| ||| | | || ||| || | ||||| |
Sbjct 565 CAGATTACACCGCAAGTGCCAACAC-AGGTGCTTGTTATGAGAGGATCAACGCCTTACTA 623
Query 645 GAGAAGCGGTCCATGGGCGGGAACAAGGTTCACTGGGATACCAG-AAATGGATGCAT-CG 702
||||||||||||||||| |||||||||||| |||||||| | ||||||||| || |
Sbjct 624 TAGAAGCGGTCCATGGGCTAAAACAAGGTTCACGGGGATACC-GCAAATGGATG-ATACA 681
Query 703 TATGTGA-ATCCATTGGGAATGGTCCAAG-ATGAAGTC-AACGGCACAGGAGT-TTTCGC 758
| | | | |||| | | | | | || | || | | || || ||||| | | || |
Sbjct 682 T-TTTCAGGTCCAGTCAGCCT--T-C-AGCAGGATG-CAAATGGGTCAGGA-TCTCTCAC 734
Query 759 TTTTTGTGTTCTGAGAAATTTCAATTTGTC-ATACATCAA-GCTAACGCCAGAAGGATCA 816
|| || | | ||||| ||||| ||| | || ||| |||||| || |||| ||
Sbjct 735 TTATT-TAAAC--AGAAACTTCAA-ACGTCAACGCA-CAATGCTAACATCA-AAGG-GCA 787
Query 817 TTGAGGA--TTACACGGAATAATGGAACCGACTGGATCA-AGCACTTTGAGGGTCC-GCT 872
|||| || | || ||||||| || |||||| | | | |||||| || ||| ||
Sbjct 788 CACAGGAGTTTTCTTGGCATAATGGGACAGACTGGGT-ATTGAACTTTGTGGCTCCAGC- 845
Query 873 AAC-CTCGTGTGATCTA-TATGGTAG-ATGTGGACCTTTTGGCTTGTGTGTG-AGATCCG 928
|| ||| |||||| || || ||| | ||||||||||||||| ||||||||| || ||||
Sbjct 846 -ACACTCATGTGAT-TACTACGGT-GCATGTGGACCTTTTGGGTTGTGTGTGAAG-TCCG 901
Query 929 GTACTCCAATGTGCCAA-TGCTTAAAAGGGTTCGAACC-AAAATCAGAT-GAGGAGTGGA 985
| |||||| || ||| || || |||||||| | || ||| || || ||||||||||
Sbjct 902 TTCCTCCAAAATG-CAAGTGTTTCAAAGGGTTTGTTCCTAAAGTC--ATCGAGGAGTGGA 958
Query 986 GAAGTGGGAATTGGAGTCGTGGATGTGTGAGACGCA-CAAACTTATC-TTGTCAAGGAAA 1043
||| || || |||| | |||| |||||||| || | | ||| || | ||||||||||||
Sbjct 959 AAAGAGGAAACTGGACTGGTGGTTGTGTGAGGCGTACCGAAC-TA-CATTGTCAAGGAAA 1016
Query 1044 CTCTTCTGTAGAAACGCAGGGCAAGGACAGAGACGTATTCTATCATGTAT-CCAACATAA 1102
|||| ||| | || | | | | | | |||| ||| ||| ||| | ||| ||||
Sbjct 1017 CTCTACTG--GCAA---A--G--ATG-TA-A-ACGTCTTCCATCCTGT-TGCCAGGATAA 1063
Query 1103 AGCCTCCAGA-TTCATACGAATTAGCAAGCTTTAG-CAATGAAGAACAATGCCACCAAGG 1160
|||||||||| || |||||||| ||||| ||| | |||| ||| ||||||| || |
Sbjct 1064 AGCCTCCAGACTT-TTACGAATTTGCAAG-TTTTGTGAATGTTGAAGAATGCCAGAAAAG 1121
Query 1161 CTGTCT-CAGGAACTGTTCTTGCACAGCCTTTTCCTATGTCAGTGGAATAGGATGTTTGG 1219
|| || || || ||||||||| |||||| | ||| ||| ||||||||| || ||
Sbjct 1122 TTGCCTCCA-CAATTGTTCTTGCTTGGCCTTTGCTTATATCAATGGAATAGGGTGCTTAA 1180
Query 1220 TGTGGAACCAGGAGCTGTTGGACACAGTGAAATTTAT-TGGC-GGAGGAGAGAC-TCTTT 1276
|||||||||| || || ||||| ||||| ||||| | | || || ||||| || ||| |
Sbjct 1181 TGTGGAACCAAGACCTAATGGACGCAGTGCAATTT-TCT-GCAGGGGGAGA-ACTTCTCT 1237
Query 1277 CCCTTCGTCTTGCACATTCTGAA-TTGACT-GGAAGAAAGCG-AATCAAGATTATCACTG 1333
|| ||||||| |||| ||||||| | | | |||| ||||| || |||| || ||||
Sbjct 1238 CCATTCGTCTGGCACGTTCTGAACTAG-GTGGGAA-TAAGCGCAA-GAAGACCATTACTG 1294
Query 1334 -TTGCCACTCTCAGCCTTTCTGTTTGCT-TGAT-TTTG-GTGCTTGTTGCATGTGGGTGC 1389
| | | | | ||||||||| ||| | |||| ||| || | || ||| | ||| | |
Sbjct 1295 CTAG-TATTGTGAGCCTTTCTCTTT-TTGTGATAATTGCGT-C-TGCTGCGTTTGGTTTC 1350
Query 1390 TGGAGATACAGAGTAAAACAAAATGGTTCAAGTCTTG-TATCCAAAGACAATG--T-AGA 1445
|||||||| ||||| ||||| || | | | || ||| ||| | ||| | | |
Sbjct 1351 TGGAGATATAGAGTGAAACATAA-----C--G-C-TGATAT-AAAAAAGGATGCTTCACA 1400
Query 1446 AGGCGCTTGGAAGAGTGAT-TTACAATCACAAGATGTCTCAGGTTTAAATTTCTTTGAGA 1504
|| || |||| || |||| | | || |||||||||||||||||||||||||||||||||
Sbjct 1401 AGTTGCATGGAGGAATGATCTGA-AACCACAAGATGTCTCAGGTTTAAATTTCTTTGAGA 1459
Query 1505 TTCATGACC-TACAAACCGCCACGAATAATTTCAG-CGTGTTAAATAAACTCGGTCAGGG 1562
| || ||| | ||||| ||||| ||||||||||| | | ||| |||||||| || ||
Sbjct 1460 TGAAT-ACCATTCAAACTGCCACCAATAATTTCAGTC-TACCAAACAAACTCGGACAAGG 1517
Query 1563 TGGATTTGGTACGGTTTATAAGGGGAAGCTTC-AGGACGG-AAAGGAAATAGCTGTAAAA 1620
|||||||||| | ||||| ||||| ||||| | || | || |||| |||| ||||| |||
Sbjct 1518 TGGATTTGGTTCAGTTTACAAGGGAAAGCTGCCAG-ATGGGAAAG-AAATTGCTGTCAAA 1575
Query 1621 CGTCTTACTAGCAGCTCTGTACAGGGCACA-GAGGAGTTCATGAACGAGATAAAACTCAT 1679
|| ||| |||| ||||| | ||||||| | || ||||||||||| || ||| ||||||
Sbjct 1576 CGGCTTTCTAGTAGCTCGGGCCAGGGCA-ATGAAGAGTTCATGAATGAAATAGTACTCAT 1634
Query 1680 CTCGAAATTACAACACAGAAACTT-GCTTCGGCTTTTGGGATGCTGCATCGATGGAGAAG 1738
||| ||| ||||||| | |||||| | ||||| |||||||||| ||||| || |||||||
Sbjct 1635 CTCAAAACTACAACATAAAAACTTAG-TTCGGATTTTGGGATGTTGCATTGAAGGAGAAG 1693
Query 1739 AGAAGCTATTGGTCTATGAATATATGGTGAACAAAAGCCTTGATATCTTTA-TATTTGAT 1797
||||||||||| | ||||| | |||| | |||||||||||||||| |||| | ||||||
Sbjct 1694 AGAAGCTATTGATTTATGAGTTTATGTTTAACAAAAGCCTTGATA-CTTTTCTCTTTGAT 1752
Query 1798 TTGAAGAAAAAG-CTTGAGATTGATTGGGCTACGAGATTCAATATCATTCAAGGAATCGC 1856
| || |||||| ||||||||||| ||| | | |||||| ||||||||||||| || ||
Sbjct 1753 TC-AATAAAAAGACTTGAGATTGACTGGCCAAAGAGATTTGATATCATTCAAGGTATTGC 1811
Query 1857 TCGTGGACTTCTCTATCTCCATCGTGACTCAT-TCCTCAGAGTTG-TACACCGCGATCTG 1914
|||||| ||| ||||||||||||||||||| || ||| || | | ||||| ||||||
Sbjct 1812 GCGTGGAATTCACTATCTCCATCGTGACTCACATC-TCA-AGGTAATTCACCGAGATCTG 1869
Query 1915 AAGGTCAGCAATATTCT-CTTGGATGAGAAAATGAACCCAAAAATATCGGATTTTGGATT 1973
||||||||||||||||| || ||||||||||||||| ||||| ||||| |||||||||||
Sbjct 1870 AAGGTCAGCAATATTCTTCT-GGATGAGAAAATGAATCCAAAGATATCAGATTTTGGATT 1928
Query 1974 GGCTCGGCTGTTTCATGGAAATC-AACATCAAGACAGCACTGGTAGTGTTGTAGGCACTC 2032
||||||| ||| ||| |||| | || |||| |||| ||| | || |||||||| ||||
Sbjct 1929 GGCTCGGATGTATCAGGGAAC-CGAATATCAGGACAATACTCGCAGGGTTGTAGGAACTC 1987
Query 2033 TAGGATACATGTCTCCCGAGTATGCTTGGACTGGTACGTTCTCTGAAAAATCCGACATTT 2092
||||||| ||| |||| |||||||| |||||||| | |||||||||||| |||||||| |
Sbjct 1988 TAGGATATATGGCTCCTGAGTATGCATGGACTGGGATGTTCTCTGAAAAGTCCGACATCT 2047
Query 2093 ACAGCTTCGGAGTTCTGATGCTCGAAATCATCA-CTGGCAAGGAGATTTCAAGTTTCAGC 2151
| |||||||||||||| ||| | |||||||| | | || | | |||| ||||| ||||||
Sbjct 2048 ATAGCTTCGGAGTTCTAATGTTAGAAATCATTAGCGGGGA-GAAGATCTCAAGGTTCAGC 2106
Query 2152 TATGGCAAAGAT-AACAAAAACCTTCTTTCATATGCATGGGACTCGTGGAGCGAAAACGG 2210
||||||||||| || ||||||||| || ||||||| ||||| || ||| | |||| | |
Sbjct 2107 TATGGCAAAGAAGAA-AAAAACCTTATTGCATATGCGTGGGAATCTTGGTGTGAAA-CTG 2164
Query 2211 G-GGAGT-GAATCTACTGGACCAAGATCTTGATGATTC-TGATTCAGTTAATTCAGTTGA 2267
| ||||| || ||| |||| ||||| | | |||||| || | || | || || |
Sbjct 2165 GAGGAGTTGA-TCTTTTGGATAAAGATGTGGCTGATTCATG-T-CACCCA-TT-AGAAGT 2219
Query 2268 AGCAGGAAGATGTGTTCATATTGGTCTGCTCTGTGTTCAGCATCAAGCTATTGATAGACC 2327
| || | |||||||||| |||||||||||||||||||| || ||| || || |||||
Sbjct 2220 TG-AG-A-GATGTGTTCAGATTGGTCTGCTCTGTGTTCAACACCAACCTGCAGAGAGACC 2276
Query 2328 AAACATCAAACAAGTTA-TGTCAATGCTGACTTCAACAACGGATCTTCC-TAAGCCAACA 2385
||||| ||| |||| |||| ||||| | ||||| | |||||||| | | |||| |
Sbjct 2277 AAACA-CAATTGAGTTGCTGTCTATGCTCTCCACAACATCAGATCTTCCATCA-CCAAAA 2334
Query 2386 CAACCAATGTTTGTATTGGAGACAAGTGATGAGGATTCTTC-TCT 2429
||||| | |||||| || | || || ||||| || || || |||
Sbjct 2335 CAACCCACATTTGTAGTGCACACTAGAGATGATGAATCATCGTCT 2379
> Ahg907303 jgi|Araly1|907303|Al_scaffold_0002_384
Length=2316
Score = 723 bits (391), Expect = 0.0
Identities = 1012/1301 (78%), Gaps = 86/1301 (7%)
Strand=Plus/Plus
Query 1148 AATGCCACCAAGGCTGTCT-CAGGAACTGTTCTTGCACAGCCTTTTCCTAT-GTCAGTGG 1205
||||||||||| | || || || || ||||||||| || ||| | ||| | || ||
Sbjct 1004 AATGCCACCAACGTTGCCTCCA-CAATTGTTCTTGCTTGGCATTTGCTTATATTAAG-GG 1061
Query 1206 AATAGGATGTTTGGTGTGGAACCAGGAGCTGTTGGACACAGTGAAATTTAT-TGGC-GGA 1263
|||||| ||| | |||||||||||||| || ||||| ||||| | ||| | | || |
Sbjct 1062 AATAGGGTGTCTAGTGTGGAACCAGGACCTAATGGACGCAGTGCAGTTT-TCT-GCAACA 1119
Query 1264 GGAGAGAC-TCTTTCCCTTCGTCTTGCACATTCTGAA-TTGACTGGAAGA-AAGCGAATC 1320
||||| || ||||||| |||||||||||| ||||||| | || ||||| | ||||| |
Sbjct 1120 GGAGA-ACTTCTTTCCATTCGTCTTGCACGTTCTGAACTAGA-TGGAA-ATAAGCG---C 1173
Query 1321 AAGATTATCACTGTTGCCACT-C--TCAGCCT--TTCTGTTTGCTTGATTTTGGTGCTT- 1374
|||| | || |||||| | | | | ||||| || |||| |||| |||| ||||
Sbjct 1174 AAGAAGACCATTGTTGCTAGTACAGTGAGCCTGACCCTATTTG--TGATCTTGG-GCTTC 1230
Query 1375 GTTGCATGTGGGTG-CTGGAGATACAGAGTAAAACAAAATGGTTCAAGTCTTGTATCCAA 1433
||| | | |||| |||||||| |||||| |||| || | | || | ||| |
Sbjct 1231 ACTGCGT-TTGGTGTCTGGAGATGCAGAGTGGAACATAA-CG--C---TCATATAT-C-- 1280
Query 1434 AGACAATGTAGAAGGCGCTTGGAAGAGTGAT-TTACAATCACAAGATGTCTCAGGTTTAA 1492
| || | | | ||||||| || |||| | | || ||||||||||| ||||||||
Sbjct 1281 --A-AA-G--G-A--TGCTTGGAGGAATGATCTGA-AACCACAAGATGTCCCAGGTTTAG 1330
Query 1493 ATTTCTTTGAGATTCATGACC-TACAAACCGCCACGAATAATTTCAGCGTGTTAAATAAA 1551
|||||||||| || || ||| | |||| |||||| ||||||||||| | | ||| |||
Sbjct 1331 ATTTCTTTGATATGAAT-ACCATTCAAAACGCCACAAATAATTTCAGTTTATCAAACAAA 1389
Query 1552 CTCGGTCAGGGTGGATTTGGTACGGTTTATAAGGGGAAGCTTCAGGA-CGGAAAGGAAAT 1610
||||| || |||||||||||| | ||||||||||| ||||| || || ||||| |||||
Sbjct 1390 CTCGGACAAGGTGGATTTGGTTCAGTTTATAAGGGAAAGCTGCAAGATGGGAAA-GAAAT 1448
Query 1611 AGCTGTAAAACGTCTTACTAGCAGCTCTGTACAGGGCACAGAGGAGTTCATGAACGAGAT 1670
|| |||||||| ||| |||||||||| | |||||||| ||||||||||| ||| || ||
Sbjct 1449 TGCAGTAAAACGGCTTTCTAGCAGCTCCGGACAGGGCAAAGAGGAGTTCAAGAATGAAAT 1508
Query 1671 AAAACTCATCTCGAAATTACAACACAGAAACTTGCTTCGGCTTTTGGGATGCTGCATCGA 1730
| ||||||||| ||| | ||||||||||||||| ||||| |||||||||| ||||| ||
Sbjct 1509 ACTACTCATCTCAAAACTCCAACACAGAAACTTGGTTCGGGTTTTGGGATGTTGCATTGA 1568
Query 1731 TGGAGAAGAGA-AGCTATTGGTCTATGAATATATGGTGAACAAAAGCCTTGATATC-TTT 1788
||||| || | ||||||| | ||||| | |||||||||||| |||||||||| | |||
Sbjct 1569 AGGAGACGA-ACGGCTATTGATTTATGAGTTTATGGTGAACAAGAGCCTTGATA-CTTTT 1626
Query 1789 ATATTTGATTTGAAGAAAAA-GCTTGAGATTGATTGGGCTACGAGATTCAATATCATTCA 1847
|| ||||| || |||||||| ||| |||||||||||| | | ||||| ||||||||||
Sbjct 1627 ATCTTTGA-TTCAAGAAAAAGGCTGGAGATTGATTGGCCAAAAAGATTTGATATCATTCA 1685
Query 1848 AGGAATCGCTCGTGGACTTCTCTATCTCCATCGTGACTCATTCCTCAGAGTTGTACACCG 1907
||| || || |||||||||||||||||||| ||||||||| |||||| || | ||| |
Sbjct 1686 AGGTATTGCACGTGGACTTCTCTATCTCCACCGTGACTCACGCCTCAGGGTAATTCACAG 1745
Query 1908 CGATCTGAAGGTCAGCAATATTC-TCTTGGATGAGAAAATGAACCCAAAAATATCGGATT 1966
|| ||||||||||||||||||| || |||||||||||||||||||||||||||| ||||
Sbjct 1746 AGACCTGAAGGTCAGCAATATTCTTC-TGGATGAGAAAATGAACCCAAAAATATCAGATT 1804
Query 1967 TTGGATTGGCTCGGCTGTTTCATGGAAATC-AACATCAAGACAGCACTGGTAGTGTTGTA 2025
|||||||||||||| ||| ||| |||| | || ||||||||| |||| | || ||||||
Sbjct 1805 TTGGATTGGCTCGGATGTATCAAGGAAC-CGAATATCAAGACAACACTCGCAGGGTTGTA 1863
Query 2026 GGCACTCTAGGATACATGTCTCCCGAGTATGCTTGGACTGGTACGTTCTCTGAAAAATCC 2085
|| ||||||||||| |||||||| |||||||| |||||||| | ||||||||| |||||
Sbjct 1864 GGAACTCTAGGATATATGTCTCCAGAGTATGCATGGACTGGGATGTTCTCTGAGAAATCG 1923
Query 2086 GACATTTACAGCTTCGGAGTTCTGATGCTCGAAATCATCA-CTGGCA-AGGAGATTTCAA 2143
||||| |||||||||||||||||| || | |||||||||| | || | || |||| ||||
Sbjct 1924 GACATCTACAGCTTCGGAGTTCTGCTGTTAGAAATCATCAGC-GG-AGAGAAGATCTCAA 1981
Query 2144 GTTTCAGCTATGGCAAAGATAACAAAAACC-TTCTTTCATATGCATGGGACTCGTGGAGC 2202
| |||||||||||| |||| ||||||| ||||| ||||||| ||||| || ||| |
Sbjct 1982 GATTCAGCTATGGCGAAGACGG-AAAAACCCTTCTTGCATATGCGTGGGAATCTTGGT-C 2039
Query 2203 -GAAAACGGGGGAGT-GAATCTACTGGACCAAGATCTTGATGATTC-TGATTCAGTTAAT 2259
||||| || ||| | || ||| |||| ||||| ||| |||||| || | || | |
Sbjct 2040 TGAAAATGGAGGAATTGA-TCTTTTGGATAAAGATGTTGCTGATTCATG-T-CACCCA-T 2095
Query 2260 TCAGTTGAAGCAGGAAGATGTGTTCATATTGGTCTGCTCTGTGTTCAGCATCAAGC-TAT 2318
| || ||| || ||||||||||| ||||||||||| ||||| || || ||| | |
Sbjct 2096 T-AG---AAGTTGGGAGATGTGTTCAGATTGGTCTGCTTTGTGTACAACA-CAATCCTGC 2150
Query 2319 TGATAGACCAAACATCAAACAAGTTA-TGTCAATGCTGACTTCAACAACGGATCTTCC-T 2376
||||||||||||| || |||| |||| ||||| || ||||| | |||||||| |
Sbjct 2151 AGATAGACCAAACA-CACTTGAGTTGCTGTCTATGCTCACCACAACATCAGATCTTCCAT 2209
Query 2377 AAGCCAACACAACCAATGTTTGTATTGGAGACAAGTGATGA 2417
| |||| ||| || | |||| |||| | || || |||||
Sbjct 2210 CA-CCAAAACAGCCCACATTTGCATTGCACACGAGAGATGA 2249
> Ahg475185 jgi|Araly1|475185|fgenesh2_kg.2__315__AT1G61380.1
Length=2592
Score = 686 bits (371), Expect = 0.0
Identities = 762/945 (81%), Gaps = 50/945 (5%)
Strand=Plus/Plus
Query 1453 TGGAAGAGTGATTTACAATCACAAGATGTCTCAGGTTTAAATTTCTTTGAGATTCATGAC 1512
||||||| |||| | || |||||||||||||||| |||| ||||||| ||| ||| ||
Sbjct 1464 TGGAAGAATGATATGGAACCACAAGATGTCTCAGGCGTAAACTTCTTTGCGATGCAT-AC 1522
Query 1513 C-TACAAACCGCCACGAATAATTTCAG-CGTGTTAAATAAACTCGGTCAGGGTGGATTTG 1570
| ||| ||| ||||| ||||| ||||| | | | ||||||||| ||||| ||||||||||
Sbjct 1523 CATACGAACTGCCACCAATAACTTCAGTCCT-TCAAATAAACTTGGTCAAGGTGGATTTG 1581
Query 1571 GTACGGTTTATAAGGGGA-AGCTTCAG--GACGGAAAGGAAATAGCTGTAAAACGTCTTA 1627
|| | ||||| || |||| || || | || || |||||||||||||| ||||| |||
Sbjct 1582 GTCCAGTTTACAA-GGGAGAG-TT-GGTAGATGGGAAGGAAATAGCTGTTAAACGCCTTG 1638
Query 1628 CTAGCAGCT-CTGTACAGGGCACAGAGGAGTTCATGAACGAGATAAAACTCATCTCGAAA 1686
|||| |||| | || ||||| ||||||||||||||||| || |||| ||| ||||| |||
Sbjct 1639 CTAGTAGCTCCGGT-CAGGGTACAGAGGAGTTCATGAATGAAATAACACTGATCTCAAAA 1697
Query 1687 TTACAACACAGAAACTTGCTTCGGCTTTTGGGATGCTGCATCGATGGAGAAGAGAAGCTA 1746
|||||||| ||||||||| ||||||||||||||| ||||||||| |||||||||||||||
Sbjct 1698 TTACAACATAGAAACTTGGTTCGGCTTTTGGGATACTGCATCGACGGAGAAGAGAAGCTA 1757
Query 1747 TTGGTCTATGAATAT-ATGGTGAACAAAAGCCTTGATATCTTTATATTTGATTTGA-AGA 1804
||| | ||||| | | |||||||||||||| || ||||| |||||||||| || |
Sbjct 1758 TTGATTTATGAGT-TCATGGTGAACAAAAGTCTCGATATTTTTATATTTG-TTCCATCTC 1815
Query 1805 AAAAGCTT-GAGATTGATTGGGCTACGAGATTCAATATCATTCAAGGAATCGCTCGTGGA 1863
|||| || || |||||||| | | |||||| |||||||||||||| || || ||||||
Sbjct 1816 TAAAG-TTCGATCTTGATTGGCCAAAGAGATTTAATATCATTCAAGGTATTGCGCGTGGA 1874
Query 1864 CTTCTCTATCTCCATCGTGACTCATTCCTCAGAGTTGTACACCGCGATCTGAAGGTCAGC 1923
|||||||||||||| ||||||||| |||||| || | ||||| || ||||||||||||
Sbjct 1875 CTTCTCTATCTCCACCGTGACTCACGCCTCAGGGTAATTCACCGAGACCTGAAGGTCAGC 1934
Query 1924 AATATTC-TCTTGGATGAGAAAATGAACCCAAAAATATCGGATTTTGGATTGGCTCGGCT 1982
|| |||| || |||| |||||||||| ||||||||||||||||||||||||||||||| |
Sbjct 1935 AACATTCTTC-TGGACGAGAAAATGATCCCAAAAATATCGGATTTTGGATTGGCTCGGAT 1993
Query 1983 GTTTCATGGAAATCAACATCAAGACAGCACTGGTAGTGTTGTAGGCACTCTAGGATACAT 2042
|||||| |||| ||| ||||||||| |||| | || |||||||| ||||||||||| ||
Sbjct 1994 GTTTCAGGGAACCCAATATCAAGACAACACTCGCAGAGTTGTAGGAACTCTAGGATATAT 2053
Query 2043 GTCTCCCGAGTATGCTTGGACTGG-TACGTTCTCTGAAAAATCCGACATTTACAGCTTCG 2101
||||||||||||||| ||| | || | ||||||||| || || || || || |||||||
Sbjct 2054 GTCTCCCGAGTATGCATGGGCAGGGTT-GTTCTCTGAGAAGTCTGATATCTATAGCTTCG 2112
Query 2102 GAGTTCTGATGCTCGAAATCATCA-CTGGCAAGGAGA-TTTCAAGTTTCAGCTATGGCAA 2159
| ||||||||| | |||||||||| | || ||| ||| ||||| | |||| |||||| |
Sbjct 2113 GTGTTCTGATGTTGGAAATCATCAGC-GGAAAG-AGAATTTCACGGTTCATCTATGGTGA 2170
Query 2160 AGATAA-CAAAAACCTTCTTTCATATGCATGGGACTCGTGGAGCGAAAACGGGGGAGTGA 2218
|| || |||| ||||||| ||||| ||||||| || ||| |||| | ||||||| | |
Sbjct 2171 TGA-AAGCAAAGGCCTTCTTGCATATACATGGGATTCTTGGTGCGAGACCGGGGGA-TCA 2228
Query 2219 A-TCTACTGGACCA-AGATCTTGA-TGATTCTGATTCAGTTAATTCAGTT-GAAGCAG-G 2273
| ||| |||||| | ||||||| | |||| | || || || || || |||| | |
Sbjct 2229 AATCTTCTGGAC-AGAGATCTT-ACTGATAC--AT---GTCAAG-CA-TTCGAAGTTGCG 2279
Query 2274 AAGATGTGTTCATATTGGTCTGCTCTGTGTTCAGCATC-AAGCTATTGATAGACCAAACA 2332
| |||||||||| |||||||||||||||||||| || | |||| |||| ||||| ||||
Sbjct 2280 A-GATGTGTTCAGATTGGTCTGCTCTGTGTTCAACA-CGAAGCCGTTGACAGACCCAACA 2337
Query 2333 -TCAAACAAGTTA-TGTCAATGCTGACTTCAACAACGGATCTTCC 2375
|| ||||| | | || ||| | |||||| |||| ||||||||
Sbjct 2338 CTCTT-CAAGT-ACTATCGATGATTACTTCAGCAACAGATCTTCC 2380
> Ahg907313 jgi|Araly1|907313|Al_scaffold_0002_394
Length=2340
Score = 564 bits (305), Expect = 1e-159
Identities = 880/1150 (77%), Gaps = 70/1150 (6%)
Strand=Plus/Plus
Query 93 TGGCTATGCAGCTATTACCACGTCAAGTCCTTTGTCGATAGGGGTAACTTTGAGCTCTCC 152
|||| |||||| ||| | ||| |||||||||||||| ||||| |||| ||||||| ||
Sbjct 105 TGGCAATGCAGATATAAACACATCAAGTCCTTTGTCAATAGGACAAACTCTGAGCTCCCC 164
Query 153 TGGTGGA-TCATATGAGCTT-GGTTTCTTCAGTTCTAACAACTCTGGGAATCAGTATGTT 210
|| |||| | |||||| || || ||||||| | |||| || ||| ||||||||||||||
Sbjct 165 TGATGGAGT-TTATGAG-TTAGGCTTCTTCACTCCTAATAATTCTCGGAATCAGTATGTT 222
Query 211 GGAATCTGGTTCAAGAA-AGTCACTCCTCGGGTTATTGTTTGGGTGGCTAACAGAGAAAA 269
|| |||||||||||||| | ||| ||||| ||| |||| ||||||||||||||||| ||
Sbjct 223 GGGATCTGGTTCAAGAACA-TCATTCCTCAGGTCGTTGTCTGGGTGGCTAACAGAGATAA 281
Query 270 GCCAGTCTCTAGTACTATGGCGAATCTCACAATCAGCAGCAATGGAAGTCTTATCTTGCT 329
||||||| | | ||| ||||||||| || |||||||||||||| ||||| ||||||||
Sbjct 282 GCCAGTCACAAAAACTGCGGCGAATCTAACTATCAGCAGCAATGGGAGTCTGATCTTGCT 341
Query 330 TGATAGCAAAAAAGATCTGGTGTGGTCATCTGGAGGA-GATCCCACATCTAACAAGTGTC 388
||| | ||| ||||| || | |||||| | ||| || | | |||||| ||||||||||
Sbjct 342 CGATGGTAAACAAGATGTGATTTGGTCAACAGGA-GAGGCTTTCACATCCAACAAGTGTC 400
Query 389 GTGCTGAGCTTTTAGACACCGGAAATCTTGTCGTCGTAGATAATGTTACTGGAAATTA-T 447
|||||||||||||||||||||||||||||| || | || || || | ||||| | |
Sbjct 401 ATGCTGAGCTTTTAGACACCGGAAATCTTGTTGTAATTGACGATATTTCCGGAAAA-ACT 459
Query 448 TTGTGGCAAAGTTTTGAGCATCTTGGTGATACAATGCTACCTCTTACATCTCTCA-TG-- 504
|| ||| |||| ||||| |||||||| |||| ||| | |||| | ||| || ||
Sbjct 460 TTATGGAAAAGCTTTGAAAATCTTGGTAATACTATGATGCCTC--AG-TCT-TCGGTGGC 515
Query 505 T-ACGATATTCCTAACA-ACAAGAAACGTGTGCTGACTTCTTGGAAGA-GTGAGACCGAT 561
| | |||||||| || ||| |||||| |||| || |||| || || | | ||||
Sbjct 516 TTATGATATTCCCCGTGGACT-GAATCGTGTGTTGACCTCATGGA-GAAGTAACAGCGAT 573
Query 562 CCATCGCCTGGGGAGTT-TGTAGCTG-AGATTACACCACAAGTACCCTCGCAAGGCCTTA 619
|||||||||||||| || | | ||| || |||| |||||||| ||| | ||||||||||
Sbjct 574 CCATCGCCTGGGGAATTCTC-A-CTGGAGTTTACGCCACAAGTCCCCCCACAAGGCCTTA 631
Query 620 TAAGGAAAGGCTCGTCACCTTATTGGAGAAGCGGTCCATGGGCGGGAACAAGGTTCACTG 679
|||||| |||||| || || || |||||||| ||||||||||| |||||| ||| |||
Sbjct 632 TAAGGAGAGGCTCATCGCCCTACTGGAGAAGTGGTCCATGGGCAAAAACAAGATTCTCTG 691
Query 680 GGATACCAGAAATGGATGCATCGTATGTGAA-TCCATTGGGAATG--GTCCAAGATGAAG 736
||||||| | ||| |||||||| ||||| || |||||| | || |||||||||| ||
Sbjct 692 GGATACCTGGAATTGATGCATCATATGT-AAGTCCATTC--ACTGTTGTCCAAGATGTAG 748
Query 737 TCAACGG-CACAGGAG--TTTTCGCTTTTTG--TGTTCTGAGAAATT-TCAATTTGTCAT 790
||| || ||||| | ||||| || || |||| ||||| | | |||| || |
Sbjct 749 -CAAAGGGCACAGCATCCTTTTC--TTATTCCATGTTA--AGAAACTATAAATTA-TCGT 802
Query 791 ACATCAA-GCTAACGCCAGAAGGATCATTGAGGATTACAC-GGAATAATGG-AACCGACT 847
| | || |||||| |||| ||| | ||| ||| | | ||||| |||| || | |
Sbjct 803 ATGT-AACGCTAACATCAGAGGGAAAAATGAAGATC-CTCTGGAATGATGGGAAAAGT-T 859
Query 848 GGAT-CAAGCACTTTGAGGGTCCG-CTAACCTCGTGTGATCTATATGGTAGAT-GTGGAC 904
||| | |||||||||| ||| | || ||| |||||||||||| || | | |||| |
Sbjct 860 GGAAGCTT-CACTTTGAGGCTCCAAC-AAGCTCATGTGATCTATATCGT-GCTTGTGGTC 916
Query 905 CTTTTGGCTTGTGTGTGAGATCCGGTA-CTCCAATGTGCCA-ATGCTTAAAAGGGTTCGA 962
||||||| ||||||||||||||| | | | |||| |||| | |||||| |||||||| |
Sbjct 917 CTTTTGGTTTGTGTGTGAGATCCAGAAAC-CCAAAGTGC-ATATGCTTGAAAGGGTTTGT 974
Query 963 ACCAAAATCAGATGAGGAGTGGAGAAGTGGGAATTGGAGTCGTGGATGTGTGAGACGCAC 1022
|||||| |||||||| ||||||| || |||||||||| |||| ||||||||||| ||
Sbjct 975 ACCAAAGTCAGATGACGAGTGGAAAAAAGGGAATTGGACAAGTGGGTGTGTGAGACGTAC 1034
Query 1023 A-AACTTATCTTGTCA-AGGAAACTCTTCTGTAGAAACGCAGGGCAAGGACAGAGAC-GT 1079
| || |||||||| || | ||| |||||| | |||| || ||||| |||| ||| |
Sbjct 1035 ACAA-TTATCTTGCCAGATGAAT-TCTTCTACAAAAACACAAGGCAAAGACACTGACAGC 1092
Query 1080 ATTCTATCATGTATCCAACATAAAGCCTCCAGAT-TCATACGAATTAGCAAGCTTTAGCA 1138
||||| ||| || || | | ||| |||||||| | ||| |||||||| ||||| ||
Sbjct 1093 -TTCTACCATATAACCCGCGTTAAGACTCCAGATCTG-TACCAATTAGCAGGCTTTCTCA 1150
Query 1139 ATGAAGAACAATGCCACCAAGGCTGTCTCAGG-AACTGTTCTTGCACAGCCTTTTCCTAT 1197
||| |||||| ||| ||||| ||||| ||| ||||| || |||||||||||| | |||
Sbjct 1151 ATGCAGAACAGTGCTACCAAAATTGTCT-AGGCAACTGCTCCTGCACAGCCTTTGCTTAT 1209
Query 1198 GTCAGTGGAA 1207
| | |||||
Sbjct 1210 ATTACTGGAA 1219
> Ahg907312 jgi|Araly1|907312|Al_scaffold_0002_393
Length=2406
Score = 540 bits (292), Expect = 2e-152
Identities = 774/997 (78%), Gaps = 71/997 (7%)
Strand=Plus/Plus
Query 1453 TGGAAGAGTGATTTACAATCACAAGATGTCTCAGGTTTA-AATTTCTTTGAGATTCATGA 1511
|||| || |||| | ||||||||||| ||| |||||||| ||||| |||||||| || |
Sbjct 1354 TGGAGGAATGATCTGCAATCACAAGACGTCCCAGGTTTAGAATTT-TTTGAGATGAAT-A 1411
Query 1512 CC-TACAAACCGCCACGAATAATTTCAG-CGTGTTAAATAAACTCGGTCAGGGTGGATTT 1569
|| ||||||| ||||| ||||||||||| | | | ||| |||||||| || |||||||||
Sbjct 1412 CCATACAAACTGCCACCAATAATTTCAGTC-TATCAAACAAACTCGGACATGGTGGATTT 1470
Query 1570 GGTACGGTTTATAAGG-G-G-AA--G----CTTCAGGACGGAAAGGAAATAGCTGTAAAA 1620
||| | ||||| |||| | | || | || || || |||| |||||| || ||||||
Sbjct 1471 GGTTCCGTTTACAAGGCGAGAAACGGAAAACTGCAAGATGGAAGGGAAATTGCGGTAAAA 1530
Query 1621 CGTCTTACTAGCAGCTCTGTACAGGGCACAGAGGAGTTCATGAACGAGATAAAACTCATC 1680
|| ||| |||||||||||| ||||||| | ||||||||||||| || ||| ||| |||
Sbjct 1531 CGCCTTTCTAGCAGCTCTGGGCAGGGCAAACAGGAGTTCATGAATGAAATAGTACTTATC 1590
Query 1681 TCGAAATTACAACACAGAAACTT-GCTTCGGCTTTTGGGATGCTGCATCGATGGAGA-AG 1738
|| ||| | |||||||||||||| | | ||| |||||||||||||| |||| ||| | ||
Sbjct 1591 TCAAAACTCCAACACAGAAACTTAG-TCCGGGTTTTGGGATGCTGCGTCGAAGGA-ATAG 1648
Query 1739 AGAAGCTATTGGTCTATGAATATATGGTGAACAAAAGCCTTG--A-TA---TC------T 1786
| ||||||||| | ||||| | |||| ||||||||||||| | || || |
Sbjct 1649 AAAAGCTATTGATTTATGAGTTTATGAAAAACAAAAGCCTTGATACTATTGTCTTTGTTT 1708
Query 1787 TT--A---TATTTGAT-TT-G----AAGAAAAA-GCTTGAGATTGATTGGGCTACGAGAT 1834
|| | | ||| | || | |||||||| ||| ||||| |||||| | | |||||
Sbjct 1709 TTACACGGTGTTTTTTCTTAGATTCAAGAAAAAGGCTCGAGATAGATTGGCCAAAGAGAT 1768
Query 1835 TCAATATCATTCAAGGAATCGCTCGTGGACTTCTCTATCTCCATCGTGACTCATTCCTCA 1894
| ||||||||||||| || || ||||||||||||||||||||||||||||| |||||
Sbjct 1769 TTGATATCATTCAAGGTATTGCGCGTGGACTTCTCTATCTCCATCGTGACTCGCGCCTCA 1828
Query 1895 GAGTTGTACACCGCGATCTGAAGGTCAGCAATATTCT-CTTGGATGAGAAAATGAACCCA 1953
|||| | ||| | || |||||||||||||| ||||| || ||| ||||||||||||||
Sbjct 1829 GAGTAATTCACAGAGACCTGAAGGTCAGCAACATTCTTCT-GGACGAGAAAATGAACCCG 1887
Query 1954 AAAATATCGGATTTTGGATTGGCTCGGCTGTTTCATGGAAATCAACATCAAGACAGCACT 2013
|||||||| |||||||| ||||||||| ||||||| |||| ||| |||| |||| |||
Sbjct 1888 AAAATATCAGATTTTGGGTTGGCTCGGATGTTTCAGGGAACCCAATATCAGGACAAAACT 1947
Query 2014 GGTAGTGTTGTAGGCACTCTAGGATACATGTCTCCCGAGTATGCTTGGACTGGTACGT-T 2072
| || ||||| || ||||||||||| |||||||| |||||||| |||||||| ||| |
Sbjct 1948 CGCAGGGTTGTCGGAACTCTAGGATATATGTCTCCTGAGTATGCATGGACTGG--CGTAT 2005
Query 2073 -CTCTGAAAAATCCGACATTTACAGCTTCGGAGTTCTGA-TGCTCGAAATCATCA-CTGG 2129
|||||| ||||| ||||| || |||||||||||||| | |||| |||||||||| | ||
Sbjct 2006 TCTCTGAGAAATCAGACATCTATAGCTTCGGAGTTCT-ACTGCTAGAAATCATCAGC-GG 2063
Query 2130 CA-AGGAGATTTCAAGTTTCAGCTATGGCAAAGATAACAAAAAC-CTTCTTTCATATGCA 2187
| || |||| ||||| |||||||||||| | || | |||| | |||||| ||||||||
Sbjct 2064 -AGAGAAGATCTCAAGGTTCAGCTATGGCGAGGA-AGGAAAAGCACTTCTTGCATATGCA 2121
Query 2188 TGGGACTCGT-GGAGCGAAAACGGGGGAGTGAATCTACTGGACCAAGATCTTGATGATTC 2246
||||| | || || | |||| | | ||||| ||||| ||||||||| ||||| ||||||
Sbjct 2122 TGGGAAT-GTTGGTGTGAAACCCGAGGAGTTAATCTTTTGGACCAAGCTCTTGCTGATTC 2180
Query 2247 T-GATTCAGTTAATTCAGTTGAAGCAGGAAGATGTGTTCATATTGGTCTGCTCTGTGTTC 2305
| | | || | | | | |||| ||||| ||||| || |||||| |||| |||||||
Sbjct 2181 TTG-T-CACCCA-T-C--T-GAAGTTGGAAGGTGTGTCCAGATTGGTTTGCTTTGTGTTC 2233
Query 2306 AGCATCAAGC-TATTGATAGACCAAACATCAAACAAGTTA-TGTCAATGCTGACTTCAAC 2363
| || | ||| | || |||||||||| || |||| |||| ||||| || ||||
Sbjct 2234 AACA-CGAGCCTGCAGACAGACCAAACA-CACTTGAGTTGCTGTCTATGCTTACCACAAC 2291
Query 2364 AACGGATCTTCCTAAGCCAACACAACCAATGTTTGTA 2400
| ||||||||| ||||| |||||| | ||||||
Sbjct 2292 GTCAGATCTTCCTCTGCCAAAACAACCTACATTTGTA 2328
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 99834532145
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5