BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G61415.1 Length=1081 Score E Sequences producing significant alignments: (Bits) Value Ahg907308 jgi|Araly1|907308|Al_scaffold_0002_389 625 2e-178 Ahg475181 jgi|Araly1|475181|fgenesh2_kg.2__311__AT1G61420.1 442 3e-123 Ahg475178 jgi|Araly1|475178|fgenesh2_kg.2__308__AT1G61460.1 435 4e-121 Ahg907311 jgi|Araly1|907311|Al_scaffold_0002_392 368 4e-101 Ahg924884 jgi|Araly1|924884|scaffold_200445.1 357 1e-97 Ahg907303 jgi|Araly1|907303|Al_scaffold_0002_384 311 8e-84 Ahg475177 jgi|Araly1|475177|fgenesh2_kg.2__307__AT1G61490.1 278 8e-74 Ahg907300 jgi|Araly1|907300|Al_scaffold_0002_381 272 4e-72 Ahg907304 jgi|Araly1|907304|Al_scaffold_0002_385 255 4e-67 Ahg907307 jgi|Araly1|907307|Al_scaffold_0002_388 185 5e-46 > Ahg907308 jgi|Araly1|907308|Al_scaffold_0002_389 Length=507 Score = 625 bits (338), Expect = 2e-178 Identities = 451/505 (89%), Gaps = 10/505 (2%) Strand=Plus/Plus Query 31 ATGGAGGATTCAGGTGCGATTCTATGTCAAATCTCCATTTTCAAGGACATGCTTGATCAG 90 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1 ATGGAGGATTCAGGTGCGATTCTATGTCAGATCTCCATTTTCAAGGACATGCTTGATCAG 60 Query 91 GTCAATCGGGAAATCGAAGCAAACATTCAGGTCACGCGAGAGATCGAATCACAGATCGGA 150 |||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||| Sbjct 61 GTCAATCGGGAAATCGAAGCGAACATTCAGGTGTCGCGAGAGATCGAATCAGAGATCGGA 120 Query 151 AATTGTTCTGAGACGGAATCGGCTCTGTCTGTCAAAGAAGCTGAGCTTACTAAATCGTTC 210 |||||||| | || |||| |||| || || ||||||||||||||||||| ||||||| Sbjct 121 GCGTGTTCTGATATGGGATCGACTCTATCCGTTAAAGAAGCTGAGCTTACTAGATCGTTC 180 Query 211 CTTGCTTCTCAGTTCGAGATCAATGGTTTGATCTCCGTTACAGCTGATTCAAGAAACTCT 270 |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct 181 CTTGCTTCTCAGTTCGAGATCAGCGGTTTGATCTCCGTTACAGCCGATTCAAGAAACTCT 240 Query 271 CTGAAGCTATTGGAGGATGAGATTTGTCGTTTGAGAAATGAGCATAGTGAGCTAATTACA 330 |||||||||||||||||||||||| ||| |||||| |||||| ||||||||||||||| Sbjct 241 CTGAAGCTATTGGAGGATGAGATTCATCGCCTGAGAAGTGAGCACAGTGAGCTAATTACA 300 Query 331 AGACTAACCGAGAAGCGGGAAGGTTTTGTGAAGATGTGTTTTGGGTTTCA-AAGGGAGAT 389 || |||||||| |||| || ||| |||||||| ||||||||| | || || |||| |||| Sbjct 301 AGGCTAACCGAAAAGCAGGCAGGGTTTGTGAATATGTGTTTTCGATTCCAGAAGG-AGAT 359 Query 390 TGAAGACAGTGAATTCA-GGAATTTATTGTTGGAAAGAGAGTTTCTCGACAACGAAGTTC 448 ||| || ||||||| || ||| |||||||| ||| || |||||||| || ||||||||| Sbjct 360 TGAGGATAGTGAAT-CAAGGAGTTTATTGTCGGAGAGGGAGTTTCTAGAAAACGAAGTTT 418 Query 449 GGATGT-TGGAGGA-GAAGAAC-TTAGATGTGAAGAACTCTATTTTGGCTTACATGGAAG 505 |||| | ||||| | ||||||| || |||||||||||||| ||||||||||||||||||| Sbjct 419 GGAT-TATGGAG-ATGAAGAACATT-GATGTGAAGAACTCGATTTTGGCTTACATGGAAG 475 Query 506 ATGAAATGATGAATCTATTATCTGA 530 ||||||||||||||||||||||||| Sbjct 476 ATGAAATGATGAATCTATTATCTGA 500 > Ahg475181 jgi|Araly1|475181|fgenesh2_kg.2__311__AT1G61420.1 Length=2536 Score = 442 bits (239), Expect = 3e-123 Identities = 328/371 (88%), Gaps = 6/371 (2%) Strand=Plus/Minus Query 597 TATACAAAAAATATGTTACAAAAAGAATAAAAGGTGAAGTTTGT-TA-TC-AACGCCCTA 653 |||||||||||| | |||| ||| ||||||||||||||| || | | || || | | Sbjct 2507 TATACAAAAAATCTTTTACTAAACGAATAAAAGGTGAAG-TTATCAATTCTAAAG-TTTT 2450 Query 654 AGATCAAACATCATTTCTTAACGCCCTAAGATCACAGACTTTGTCATCTCATTCACAGTG 713 | ||||||||||| |||| |||||||||||| |||||| ||||||| ||||||||||||| Sbjct 2449 A-ATCAAACATCAATTCTCAACGCCCTAAGAACACAGATTTTGTCAACTCATTCACAGTG 2391 Query 714 ATCAAATCCTCAGACGATGATTTGTCATCTCTCCTGTGCACTACAAATGTCGGTTGTTCT 773 |||||||||| ||||||||||| |||||||| |||||||||||||||| ||||||| | Sbjct 2390 ATCAAATCCTTAGACGATGATTCATCATCTCTAGTGTGCACTACAAATGTGGGTTGTTTT 2331 Query 774 GGTGGTGGAAGATCTGATGTTGTGGTGAGCATAGACAGCAACTCAAGTGTGTTGGGTCTA 833 |||| |||||||||||||||||||| |||||||||||||||||||| |||||| ||||| Sbjct 2330 GGTGATGGAAGATCTGATGTTGTGGAGAGCATAGACAGCAACTCAATTGTGTTTGGTCTC 2271 Query 834 TCTGCAGGTTGGTGTTGAACACAGAGCAGACCGATCTGAACACATCTCTCAACTTCCAGT 893 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | | Sbjct 2270 TCTGCAGGTTGGTGTTGAACACAGAGCAGACCAATCTGAACACATCTCTCAACTTCTAAT 2211 Query 894 GGGCGACATGAATCGGCGACATCTTTGTCCAAGAGATCAATTCCTCCAGTATCACACCAA 953 ||| |||||||||| || |||||||| ||||| ||||||| ||||||||| ||||||||| Sbjct 2210 GGGTGACATGAATCAGCCACATCTTTATCCAAAAGATCAACTCCTCCAGTTTCACACCAA 2151 Query 954 GATTCCCACGC 964 ||||||||||| Sbjct 2150 GATTCCCACGC 2140 > Ahg475178 jgi|Araly1|475178|fgenesh2_kg.2__308__AT1G61460.1 Length=2515 Score = 435 bits (235), Expect = 4e-121 Identities = 283/307 (92%), Gaps = 0/307 (0%) Strand=Plus/Minus Query 658 CAAACATCATTTCTTAACGCCCTAAGATCACAGACTTTGTCATCTCATTCACAGTGATCA 717 |||||||| ||||| |||||||||||||||||||||||||||||| |||||||||||||| Sbjct 2502 CAAACATCGTTTCTCAACGCCCTAAGATCACAGACTTTGTCATCTTATTCACAGTGATCA 2443 Query 718 AATCCTCAGACGATGATTTGTCATCTCTCCTGTGCACTACAAATGTCGGTTGTTCTGGTG 777 |||||| ||||||||||| || ||||||| |||||||||||||||| ||||||| ||||| Sbjct 2442 AATCCTTAGACGATGATTCGTAATCTCTCGTGTGCACTACAAATGTGGGTTGTTTTGGTG 2383 Query 778 GTGGAAGATCTGATGTTGTGGTGAGCATAGACAGCAACTCAAGTGTGTTGGGTCTATCTG 837 |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| | Sbjct 2382 ATGGAAGATCTGATGTTGTGGTGAGCATAGACAACAACTCAATTGTGTTGGGTCTATCAG 2323 Query 838 CAGGTTGGTGTTGAACACAGAGCAGACCGATCTGAACACATCTCTCAACTTCCAGTGGGC 897 |||||||||||||||||||||||| ||| ||||||||||||||||||||||| | |||| Sbjct 2322 CAGGTTGGTGTTGAACACAGAGCAAACCAATCTGAACACATCTCTCAACTTCTAATGGGT 2263 Query 898 GACATGAATCGGCGACATCTTTGTCCAAGAGATCAATTCCTCCAGTATCACACCAAGATT 957 |||||||||| || |||||||| ||||| ||||||| ||||||||| ||||||||||||| Sbjct 2262 GACATGAATCAGCCACATCTTTATCCAAAAGATCAACTCCTCCAGTTTCACACCAAGATT 2203 Query 958 CCCACGC 964 ||||||| Sbjct 2202 CCCACGC 2196 > Ahg907311 jgi|Araly1|907311|Al_scaffold_0002_392 Length=354 Score = 368 bits (199), Expect = 4e-101 Identities = 239/259 (92%), Gaps = 0/259 (0%) Strand=Plus/Plus Query 90 GGTCAATCGGGAAATCGAAGCAAACATTCAGGTCACGCGAGAGATCGAATCACAGATCGG 149 ||||||||||||||||||||| |||||||| || |||||||||||||||||||| ||||| Sbjct 93 GGTCAATCGGGAAATCGAAGCGAACATTCAAGTGACGCGAGAGATCGAATCACATATCGG 152 Query 150 AAATTGTTCTGAGACGGAATCGGCTCTGTCTGTCAAAGAAGCTGAGCTTACTAAATCGTT 209 |||||||||||||| |||||| |||| ||||| |||||||||||||||||||||||||| Sbjct 153 AAATTGTTCTGAGATGGAATCTTCTCTATCTGTTAAAGAAGCTGAGCTTACTAAATCGTT 212 Query 210 CCTTGCTTCTCAGTTCGAGATCAATGGTTTGATCTCCGTTACAGCTGATTCAAGAAACTC 269 | ||||||||||||||||||||| ||||||||||| || |||||||||||||||||||| Sbjct 213 CATTGCTTCTCAGTTCGAGATCAGCGGTTTGATCTCTGTAACAGCTGATTCAAGAAACTC 272 Query 270 TCTGAAGCTATTGGAGGATGAGATTTGTCGTTTGAGAAATGAGCATAGTGAGCTAATTAC 329 |||||||||| |||||||||| |||||||| ||||||||||||| |||||||||||||| Sbjct 273 TCTGAAGCTACTGGAGGATGATATTTGTCGCCTGAGAAATGAGCACAGTGAGCTAATTAC 332 Query 330 AAGACTAACCGAGAAGCGG 348 ||| ||||||||||||||| Sbjct 333 AAGGCTAACCGAGAAGCGG 351 Score = 110 bits (59), Expect = 3e-23 Identities = 61/62 (98%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 31 ATGGAGGATTCAGGTGCGATTCTATGTCAAATCTCCATTTTCAAGGACATGCTTGATCAG 90 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1 ATGGAGGATTCAGGTGCGATTCTATGTCAGATCTCCATTTTCAAGGACATGCTTGATCAG 60 Query 91 GT 92 || Sbjct 61 GT 62 > Ahg924884 jgi|Araly1|924884|scaffold_200445.1 Length=2473 Score = 357 bits (193), Expect = 1e-97 Identities = 267/303 (88%), Gaps = 4/303 (1%) Strand=Plus/Minus Query 661 ACATCATTTCTTAACGCCCTAAGATCACAGACTTTGTCATCTCATTCACAGTGATCAAAT 720 |||| ||| || | ||||||| ||||||||||| |||||||||||| |||||| ||||| Sbjct 2463 ACATAATTCCTCACCGCCCTAGGATCACAGACTCTGTCATCTCATTGACAGTGTTCAAA- 2405 Query 721 C-CTCAGACGATGATTTGTCATCTCTCCTGTGCACTACAAATGTCGGTTGTTCTGGTGGT 779 | || ||||| ||||| ||||||| || |||||| ||||||||| ||||||| ||||| | Sbjct 2404 CTCTTAGACGGTGATTCGTCATCTATCGTGTGCAATACAAATGTAGGTTGTTTTGGTGAT 2345 Query 780 GGAAGATCTGATGTTGTGGTGAGCATAGACAGCAACTCAAGTGTGTTGGGTCTATCTGCA 839 ||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct 2344 GGAAGTTCTGATGTTGTGGTGAGCATAGACAGCAACTCAAGTGTGTTTGGTCTGTCTGCA 2285 Query 840 GGTTGGTGTTGAACACAGAGCAGACCGATCTGAACACATCTCTCAACTTCCAGTGGGCGA 899 ||||||||||| |||||||| ||||| ||||| ||||||||||||||||| | ||||||| Sbjct 2284 GGTTGGTGTTGGACACAGAGAAGACCAATCTGCACACATCTCTCAACTTCTAATGGGCGA 2225 Query 900 CATGAATCGGCGACATCTTTGTCCAAGAGATCAATTCCTCCAGTATC-ACACCAAGATTC 958 |||||||| || ||||||| |||||| ||||||| ||||||||| || | |||||||||| Sbjct 2224 CATGAATCAGCAACATCTTGGTCCAAAAGATCAACTCCTCCAGT-TCCAGACCAAGATTC 2166 Query 959 CCA 961 ||| Sbjct 2165 CCA 2163 > Ahg907303 jgi|Araly1|907303|Al_scaffold_0002_384 Length=2316 Score = 311 bits (168), Expect = 8e-84 Identities = 258/300 (86%), Gaps = 12/300 (4%) Strand=Plus/Minus Query 671 TTAACGCCCTAA-GATCACAGACTT-TGTCATCTCATTCACAGTGA-TCAAAT-CCTCAG 726 ||||||| | || ||||| ||| || |||||||||||| || || | |||||| ||| | Sbjct 2316 TTAACGCGC-AAGGATCAAAGA-TTGTGTCATCTCATTGACGGT-ACTCAAATCCCT-AA 2261 Query 727 AC-GATGATTTGTCATCTCTCCTGTGCACTACAAATGTCGGTTGTTCTGGTGGTGGAAGA 785 || | | || |||||||||| |||||| | ||||||| || |||| ||||| ||||||| Sbjct 2260 ACTG-GGGTTCGTCATCTCTCGTGTGCAATGCAAATGTGGGCTGTTTTGGTGATGGAAGA 2202 Query 786 TCTGATGTTGTGGTGAGCATAGACAGCAACTCAAGTGTGTTGGGTCTATCTGCAGG-TTG 844 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct 2201 TCTGATGTTGTGGTGAGCATAGACAGCAACTCAAGTGTGTTTGGTCTATCTGCAGGATTG 2142 Query 845 GTGTTGAACACAGAGCAGACCGATCTGAACACATCTCTCAACTTCCAGTGGGCGACATGA 904 ||||| ||||| |||||||| ||||||||||||||| ||||||| | |||| ||||||| Sbjct 2141 -TGTTGTACACAAAGCAGACCAATCTGAACACATCTCCCAACTTCTAATGGGTGACATGA 2083 Query 905 ATCGGCGACATCTTTGTCCAAGAGATCAATTCCTCCAGTATCACACCAAGATTCCCACGC 964 ||| || |||||||| ||||| ||||||||||||||| | ||| |||||||||||||||| Sbjct 2082 ATCAGCAACATCTTTATCCAAAAGATCAATTCCTCCATTTTCAGACCAAGATTCCCACGC 2023 > Ahg475177 jgi|Araly1|475177|fgenesh2_kg.2__307__AT1G61490.1 Length=2415 Score = 278 bits (150), Expect = 8e-74 Identities = 249/296 (84%), Gaps = 10/296 (3%) Strand=Plus/Minus Query 671 TTAACGCCCTAA-GATCACAGACTT-TGTCATCTCATTCACAGTGATCAAATCCTCAGAC 728 ||||||||| || ||||| ||| || ||| || ||||| || | |||||||||| |||| Sbjct 2415 TTAACGCCC-AAGGATCATAGA-TTGTGTAATTTCATTGACGGAAATCAAATCCTTAGAC 2358 Query 729 -GATGATTTGTCATCTCTCCTGTGCACTACAAATGTCGGTTGTTCTGGTGGTGGAAGATC 787 || |||||||||||| | |||||||| ||||||| ||||||| |||| ||||||||| Sbjct 2357 AGA-GATTTGTCATCTGTAGTGTGCACTGCAAATGTGGGTTGTTTTGGTAATGGAAGATC 2299 Query 788 TGATGTTGTGGTGAGCATAGACAGCAACTCAAGTGTGTTGGGTCTATCTGCAGGTTGGTG 847 ||||||||||||||||||||||| ||||||||||||||| ||||| ||||| |||||||| Sbjct 2298 TGATGTTGTGGTGAGCATAGACAACAACTCAAGTGTGTTTGGTCTGTCTGCGGGTTGGTG 2239 Query 848 TTGAACACAGAGCAGACCGATCTGAACACATCTCTC-AACTTCCAG-TGGGCGACATGAA 905 ||| |||||||||||||| ||||| || || || || |||||| || || | |||| ||| Sbjct 2238 TTGTACACAGAGCAGACCAATCTGGACGCACCT-TCCAACTTC-AGATGTGTGACAAGAA 2181 Query 906 TCGGCGACATCTTTGTCCAAGAGATCAATTCCTCCAGTATCACACCAAGATTCCCA 961 || || | ||||| |||||| |||||||||||| || ||||||||||||||||| Sbjct 2180 TCAGCAAGATCTTGGTCCAAAAGATCAATTCCTTTGGTTTCACACCAAGATTCCCA 2125 > Ahg907300 jgi|Araly1|907300|Al_scaffold_0002_381 Length=2421 Score = 272 bits (147), Expect = 4e-72 Identities = 252/301 (84%), Gaps = 14/301 (5%) Strand=Plus/Minus Query 671 TTAACGCCCTAAG-ATCACAGACTT-TGTCATCTCATTCACAGTGATCAAATC-CTCAG- 726 ||||||||| ||| | |||||| || ||||| |||||| || || |||||||| || || Sbjct 2421 TTAACGCCC-AAGCACCACAGA-TTGTGTCACCTCATTGACGGTAATCAAATCACT-AGT 2365 Query 727 ACGATGATTTGTCATCT-CTCCTGTGCACTACAAATGTCGGTTGTTCTGGTGGTGGAAGA 785 || ||| ||||| | || | |||||| ||||||| |||| || ||||| ||||||| Sbjct 2364 GCG-GGATCCGTCAT-TGCTAGTATGCACTGCAAATGTGGGTTCTTTTGGTGTTGGAAGA 2307 Query 786 TCTGATGTTGTGGTGAGCATAGACAGCAACTCAAGTGTGTTGGGTCTATCTGCAGGTTGG 845 ||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||| Sbjct 2306 TCTGATGTTGTGGTGAGCATAGACAACAACTCAAGTGTGTTGGGTCTCTCTACAGGTTGG 2247 Query 846 TGTTGAACACAGAGCAGACCGATCTGAACACATCTCTC-AACTTCCAG-TGGGCGACATG 903 ||||||||||| |||||||| || |||||||| || || |||||| || |||| |||||| Sbjct 2246 TGTTGAACACAAAGCAGACCAATTTGAACACACCT-TCCAACTTC-AGATGGGTGACATG 2189 Query 904 AATCGGCGACATCTTTGTCCAAGAGATCAATTCCTCCAGTATCACACCAAGATTCCCACG 963 |||| || |||||||| ||||| | ||||| ||||||| | || ||||| |||||||||| Sbjct 2188 AATCAGCAACATCTTTATCCAAAAAATCAACTCCTCCATTTTCGCACCATGATTCCCACG 2129 Query 964 C 964 | Sbjct 2128 C 2128 > Ahg907304 jgi|Araly1|907304|Al_scaffold_0002_385 Length=2415 Score = 255 bits (138), Expect = 4e-67 Identities = 245/296 (83%), Gaps = 10/296 (3%) Strand=Plus/Minus Query 671 TTAACGCCCTAA-GATCACAGACTT-TGTCATCTCATTCACAGTGATCAAATCCTCAGAC 728 ||||||||| || ||||| ||| || ||| || ||||| || | |||||||||| |||| Sbjct 2415 TTAACGCCC-AAGGATCATAGA-TTGTGTAATTTCATTGACGGAAATCAAATCCTTAGAC 2358 Query 729 -GATGATTTGTCATCTCTCCTGTGCACTACAAATGTCGGTTGTTCTGGTGGTGGAAGATC 787 || ||||| |||||| | |||||| ||||||| ||||||| |||| ||||||||| Sbjct 2357 AGA-GATTTATCATCTGTAGAATGCACTGCAAATGTGGGTTGTTTTGGTAATGGAAGATC 2299 Query 788 TGATGTTGTGGTGAGCATAGACAGCAACTCAAGTGTGTTGGGTCTATCTGCAGGTTGGTG 847 ||||||||||||||||||||||| ||||||||||||||| ||||| |||| |||||||| Sbjct 2298 TGATGTTGTGGTGAGCATAGACAACAACTCAAGTGTGTTTGGTCTGCCTGCGGGTTGGTG 2239 Query 848 TTGAACACAGAGCAGACCGATCTGAACACATCTCTC-AACTTCCAG-TGGGCGACATGAA 905 ||| |||||||||||||| ||||| || || || || |||||| || || | |||| ||| Sbjct 2238 TTGTACACAGAGCAGACCAATCTGGACGCACCT-TCCAACTTC-AGATGTGTGACAAGAA 2181 Query 906 TCGGCGACATCTTTGTCCAAGAGATCAATTCCTCCAGTATCACACCAAGATTCCCA 961 || || | ||||| |||||| |||||||||||| || ||||||||||||||||| Sbjct 2180 TCAGCAAGATCTTGGTCCAAAAGATCAATTCCTTTGGTTTCACACCAAGATTCCCA 2125 > Ahg907307 jgi|Araly1|907307|Al_scaffold_0002_388 Length=162 Score = 185 bits (100), Expect = 5e-46 Identities = 132/147 (90%), Gaps = 4/147 (3%) Strand=Plus/Plus Query 390 TGAAGACAGTGAATTCAGGAA-TTTATTGTTGGAAAGAGAGTTTCTCGACAACGAAGTTC 448 |||||||| |||||| |||| |||||||||| |||| |||||| || | |||||||||| Sbjct 18 TGAAGACAATGAATT-GGGAAGTTTATTGTTGAAAAGGGAGTTTTTCAAAAACGAAGTTC 76 Query 449 GGATGTTGGAGGAGAAGAACTTAGATGTGAAGAACTCTATTTTGGCTTACATGGAAG-AT 507 |||||||||||||||||||||||| |||||||||||| ||||||||||||||||| | || Sbjct 77 GGATGTTGGAGGAGAAGAACTTAGGTGTGAAGAACTCAATTTTGGCTTACATGGA-GTAT 135 Query 508 GAAATGATGAATCTATTATCTGATTAG 534 ||||||| ||||||||||||||| ||| Sbjct 136 GAAATGAGGAATCTATTATCTGAATAG 162 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 40257800352 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5