BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G61990.1
Length=1731
Score E
Sequences producing significant alignments: (Bits) Value
Ahg475136 jgi|Araly1|475136|fgenesh2_kg.2__266__AT1G61990.1 1853 0.0
Ahg924813 jgi|Araly1|924813|scaffold_200374.1 723 0.0
Ahg475137 jgi|Araly1|475137|fgenesh2_kg.2__267__AT1G61980.1 627 1e-178
Ahg924793 jgi|Araly1|924793|scaffold_200354.1 512 3e-144
Ahg924783 jgi|Araly1|924783|scaffold_200344.1 484 7e-136
Ahg315177 jgi|Araly1|315177|fgenesh1_pm.C_scaffold_2000210 484 7e-136
Ahg338172 jgi|Araly1|338172|fgenesh1_pg.C_scaffold_2000271 451 7e-126
Ahg315190 jgi|Araly1|315190|fgenesh1_pm.C_scaffold_2000223 289 6e-77
> Ahg475136 jgi|Araly1|475136|fgenesh2_kg.2__266__AT1G61990.1
Length=1405
Score = 1853 bits (1003), Expect = 0.0
Identities = 1289/1422 (91%), Gaps = 39/1422 (3%)
Strand=Plus/Plus
Query 195 AGTTGGGTCGGAATAGCTTTCAACACTGTAGCATTTGTAGC----A-TTGTCTTTTGTAA 249
|||||||||||| |||||||||||| |||||||||||| || | ||||| ||||| |
Sbjct 1 AGTTGGGTCGGACTAGCTTTCAACATTGTAGCATTTGTTGCATTGATTTGTCCTTTGTCA 60
Query 250 TGTATTCTCTGATTCTCCATGGAAGAAGGTTGGTCCAATCGCAGAAAT-GCTTGAGTTTG 308
||||||||||||||||||||||||||||||||||| ||| ||| |||| || | ||||
Sbjct 61 TGTATTCTCTGATTCTCCATGGAAGAAGGTTGGTCGAATTGCATAAATGGCGCCA-TTTG 119
Query 309 AGTGTTT-CAGTGCAAAATGCATTTGTTTTGTCCAATTCCTTCTCTTCTGCTAG-AGCTG 366
|| ||| | |||||||||||| | ||||||||||||||||||||||||| | ||||
Sbjct 120 AG-ATTTGCTCTGCAAAATGCATCTCCTTTGTCCAATTCCTTCTCTTCTGCT-GCTGCTG 177
Query 367 CTGATGTGA-G-CATTAGAGATGGTCGAAAAGGGAAGAACTTTACAGTCTCTTACCTCGT 424
||||||||| | || ||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct 178 CTGATGTGAGGTCA--AGAGATGGTCGAAAAGGAAAGAACTTTACGGTCTCTTACCTCGT 235
Query 425 TGATTCATTGGGTTT-ATCTAAAAAGCTCGCTGAATCCATCTCAAGGAAAGTTAGC-TTT 482
||||||||||||||| | ||| ||||||||||||||| ||||||||||||||| | |||
Sbjct 236 TGATTCATTGGGTTTCA-CTACAAAGCTCGCTGAATCGATCTCAAGGAAAGTT--CATTT 292
Query 483 GA-GGACAAGGTC-AATCCTGATTCTGTTCTAAGTCTGTTT-AGAAGTTACGGGTTCACA 539
| ||||||| | ||||| ||||||||||| ||||| ||| |||||| | || |||| |
Sbjct 293 CACCGACAAGG-CAAATCCGGATTCTGTTCTGAGTCT-TTTGAGAAGTCATGGCTTCATA 350
Query 540 GATTCTCAGATCT-CTACCATCATTACGGATTATCC-GTTATTGCTTGTAGC-AGATGCT 596
||||||||||||| || ||||||||| |||||||| | ||||||| || | |||||||
Sbjct 351 GATTCTCAGATCTCCT-GCATCATTACCGATTATCCAG-AATTGCTTATA-CTAGATGCT 407
Query 597 AAGAAAGCACTTGGTCGCAAGCTTCAGATTCTGCAGTCTAGAGGAGCTTCAAGCTCTGAG 656
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 408 GAGAAATCACTTGGTCGCAAGCTTCAGATTCTGCAGTCTAGAGGAGCTTCAAGCTCTGA- 466
Query 657 A-TCACTGAGATTGTTTCTACAGTACCGAGAATCTTAGGAAAGAAATCTATTACTGTATA 715
| |||||||||||||||||||||| || ||||||||||||| ||||||||| ||||||||
Sbjct 467 ACTCACTGAGATTGTTTCTACAGTTCCCAGAATCTTAGGAAGGAAATCTATCACTGTATA 526
Query 716 CTATGATGCTGTCAAAGACATTATAGTAGCCGATACGAGTTCGAGTTATGAACTCCCACA 775
|||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct 527 CTATGATGCTGTCAAAGAAATTATAGTAGCCGATAAGAGTTCGAGTTATGAACTCCCACG 586
Query 776 GGGTTCTCAGGGGAATAAAATCCGAAATGTATCGGCTTTGAGAGAATTAGGCATGCCTTC 835
||||||||||||||||||||||||||||||||| | ||||||| |||| |||||||| ||
Sbjct 587 GGGTTCTCAGGGGAATAAAATCCGAAATGTATCTGTTTTGAGACAATTGGGCATGCC-TC 645
Query 836 --TCGGTTGTTATTACCCTTGCTCGTCTCCAAATCGCAGCCTGTGTGTGGAAAAGAAAAT 893
| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct 646 AGT-GGTTGTTATTACCCTTGCTTGTCTCCAAATCGCAGCCTGTGTGTGGGAAAGAAAAT 704
Query 894 TTTGATGCATCCCTTAAGAAGGTTGTTGAGATGGGGTTTGATCCCACCACCACTAAA-TT 952
||||| | |||||| |||||||||||||||||||| |||||||||||||| | ||| ||
Sbjct 705 TTTGAAGAATCCCTCAAGAAGGTTGTTGAGATGGGTTTTGATCCCACCACTTC-AAAGTT 763
Query 953 TGTTTTAGCTTTGCGGATGCTTTACCAAATGAGCGAGAAAACGATTGAAGAAAAAGTTGT 1012
|||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 764 TGTTGTAGCTTTGCGCATGCTTTACCAAATGAGCGAGAAAACGATTGAAGAAAAAGTTGT 823
Query 1013 AGTCTTTAGAAGTTTAGGTTTTACTGTGGATGATGTATGGGAAATTTTCAAGAAGACTCC 1072
||||| || |||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 824 AGTCTATACAAGTGTAGGTTTTACTCTGGATGATGTATGGGAAATTTTCAAGAAGACTCC 883
Query 1073 TTCTGTTTTGAAAGTCTCCAAGAAGAAGATATTGAAGTCGGCTGAAACGTTTCTAGACCT 1132
||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||| |||
Sbjct 884 TTCCGTTTTGAAAGTCTCCAAGAAGAAGATATTGAAGTCTGCTGAAACATTTCTAGCCCT 943
Query 1133 AGGATATAGCAGAGCTGAGTTTCTGATGATGGTTAAGCGTTATCCTCCTTGCATTGAATA 1192
|||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct 944 AGGATATAGCAGAGCTGAGTTTTTGATGATGGTCAAGCGTTATCCTCCTTGCATTGAATA 1003
Query 1193 TTCTGTAGAGTCTGTTAAAAAGAAGAATGAGTTTCTGGTGAAGAAGATGAAATGGCCACG 1252
|||| ||||||| ||||||| |||||||||||||||||||||||||||||| |||||||
Sbjct 1004 TTCTCTAGAGTCGGTTAAAAGGAAGAATGAGTTTCTGGTGAAGAAGATGAATTGGCCACT 1063
Query 1253 AAACGCCTTGGTTTTGCACCCTCAGGTGTTTGGATACAGCATGGAGAAGAGGATTATACC 1312
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1064 AAATGCCTTGGTTTTGCACCCTCAGGTGTTTGGATACAGCATGGAGAAGAGGATTATACC 1123
Query 1313 AAGGTGTAACATACTCGAAGCTCTCTTGTCGAAAGGACTGCTCAGAAAGGGAAGTGAACT 1372
|||||||||| ||||| ||| |||||||||||||||||||||||||||| ||| |||||
Sbjct 1124 AAGGTGTAACGTACTCAAAGTTCTCTTGTCGAAAGGACTGCTCAGAAAGAAAAGCGAACT 1183
Query 1373 ACCTGCAGTGTCCTCTGTTTTGTCGTGTACCGATGAAGGATTTTTAGACAGGTATGTGAT 1432
|||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct 1184 ACCTGCCGTGTCCTCTGTTTTGTCGTGTACCGATGAAGGATTTTTAAATAGGTATGTGAT 1243
Query 1433 GAAGCACAACGAGCTGGTGCCTACGTTGATGGCTATATTCACCAAAGGTAGTGTTTCATA 1492
||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||
Sbjct 1244 GAAGCACAACGAGCTGGCGCCTACGTTGATGGCTATCTTCACCAAAGGTCGTGTTTCATA 1303
Query 1493 GATCAGAAGGCACACCTACAACAATGAGCAGTGCCAAGGTTTGTTCTTATTTTGTTGTTG 1552
||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1304 GATCAAAAGGCACACCTACAACAATGAGCAATGCCAAGGTTTGTTCTTATTTTGTTGTTG 1363
Query 1553 TCAGTTTTAGATTTCTAGATGAATCTTATGATGTGATAATGG 1594
|||||||||||| | | |||| ||||| |||| ||| |||||
Sbjct 1364 TCAGTTTTAGATCTGTCGATGGATCTTTTGATATGACAATGG 1405
> Ahg924813 jgi|Araly1|924813|scaffold_200374.1
Length=1331
Score = 723 bits (391), Expect = 0.0
Identities = 1043/1340 (78%), Gaps = 116/1340 (9%)
Strand=Plus/Plus
Query 241 CTT-TTGTAATGTATTCTCTGATTCTCCATGGAAGAAGGTTGGTCCAATCGCAGAAAT-G 298
||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||| |
Sbjct 13 CTTGTTGTAATGTATTCTCTGATTCTCCATGGAAGAAGGTTGGTCCAGTTGCAGAAATTG 72
Query 299 C-TTGAGTTTGAGTGTTT-CAGT-GCAAAATGCATTTG-TTTTGTCCAATTCC-TTCTCT 353
| || | | |||| ||| |||| | ||||||||| || |||| |||||| || ||||||
Sbjct 73 CCTT-A-TCTGAGA-TTTGCAGTAG-AAAATGCATCTGCTTTT-TCCAAT-CCGTTCTCT 126
Query 354 TCTGCT--A-GAGCTGCTGATGTGAGCATTAGAGATGGTCGAAAAGGGAAGAACTTT-AC 409
|||||| | | | ||||||||||||| || ||||||||||||||||||||| |||| ||
Sbjct 127 TCTGCTGCAAGTGATGCTGATGTGAGCCTTGGAGATGGTCGAAAAGGGAAGA-CTTTCAC 185
Query 410 AGTCTCTTACCTCGTTGATTCATTGGGTTTATCTAAAAAGCTCGCTGAATCCATCTCAAG 469
||||||||||||||||||||| ||||||||||||||||||||||| ||||| || || ||
Sbjct 186 AGTCTCTTACCTCGTTGATTCTTTGGGTTTATCTAAAAAGCTCGCAGAATCTATTTCTAG 245
Query 470 GAAAGTTAGCTT-TGA---GGACAAGG-TCAATCCTGATTCTGTTCTAAGTCTGTTT-AG 523
|||||| ||||| || || ||||| | ||||||||||||||||| ||||| ||| ||
Sbjct 246 GAAAGTCAGCTTCTGTTCTGG-CAAGGGT-AATCCTGATTCTGTTCTGAGTCT-TTTGAG 302
Query 524 AAGTTACGGGTTCACAGATTCTCAGATCTCTACCATCATTACGGATTATCCGTTATTGCT 583
|||| | |||||||||||| |||||||||| |||||||||||| |||| || ||||||
Sbjct 303 AAGTCATGGGTTCACAGATACTCAGATCTCCACCATCATTACGAATTACCCACGATTGCT 362
Query 584 TGTAGCAGATGCTAAGAAAGCACTTGGTCGCAAGCTTCAGATTCTGCAGTCTAGAGGAGC 643
| | ||||||| ||||| | ||||||| |||||||||| |||||||||| ||||||||
Sbjct 363 TACATTAGATGCTGAGAAATCCCTTGGTCCCAAGCTTCAGTTTCTGCAGTCAAGAGGAGC 422
Query 644 TTCAAGCTCTGAGATCACTGAGATTGTTTCTACAGTACCGAGAATCTTAGGAAAGA-A-- 700
||||||||||||| | ||| |||||||||||||||| || | |||||| ||||||| |
Sbjct 423 TTCAAGCTCTGAGCTAACTCAGATTGTTTCTACAGTTCCTAAAATCTTGGGAAAGAGAGG 482
Query 701 --AT----CTATTA-CTGTATACTATGATG-CTGTCAAAGACATTATAGTAGCCGATACG 752
| |||| | | | |||||||||| | ||||||| |||||||| ||| || | |
Sbjct 483 GCACAAAACTATCAGCAG-ATACTATGATTTC-GTCAAAGTCATTATAGAAGCGGACAAG 540
Query 753 AGTTC---G-A-G-----TTATGA-ACTC----CCACAGGGTTCTCAG--GG-GAATAAA 794
||||| | | | ||||| | || ||| ||||| | || || ||| |||
Sbjct 541 AGTTCCAAGTACGAGAAGTTATGTCATTCTTTGCCAGAGGGTAGTAAGCAGGAGAACAAA 600
Query 795 ATCCGAAATGTATCGGCTTTGAGAGAATTAGGCATGCCTTCTC-GGTTGTTATTAC-CCT 852
||||||||| ||| || |||||||||| | || ||||| | |||||||||| | |||
Sbjct 601 ATCCGAAATTTATTGGTTTTGAGAGAACTGGGGGTGCCT-CAGAGGTTGTTATT-CTCCT 658
Query 853 TGCTCGTCTCCAAATCG-CA-GCCTGTGTGTGGAAAAGAAAATTTTGATGCATCCCTTAA 910
||||| ||||||| || || | ||| ||||||||||||| |||||| | ||| || |
Sbjct 659 TGCTCATCTCCAA-TCAACATGTCTGC-TGTGGAAAAGAAATTTTTGAAGTATCACTCA- 715
Query 911 GAA-GGTTGTTGAGATGGGGTTTGATCCCACCACCACTAAA-TTTGTTTTAGCTTTGCGG 968
||| ||| ||||| |||| ||||||||||||||| | || ||||| ||| || |
Sbjct 716 GAAAGGTCGTTGATCTGGGTTTTGATCCCACCACCTC-AACGTTTGTCGAAGCCCTGTGC 774
Query 969 A-TGCTTTACCAAATGAGCGAGAAAACGATTGAAGAAAAAGTTG-TAGTCTTTAGAAGTT 1026
| || ||||| ||||||||| ||||| || ||||||||||| | | |||| || ||| |
Sbjct 775 ACTG-TTTACGGAATGAGCGACAAAACAATAGAAGAAAAAGTCGAT-GTCTATAAAAGGT 832
Query 1027 TAGGTTTTACTGTGGATGATGTATGGGAAATTTTCAAGAAGACTCCT-TCTGTTTTG-AA 1084
|||| ||| ||||||| |||||||||| ||| ||||||||| || ||| | ||| ||
Sbjct 833 TAGGCTTTGCTGTGGAAGATGTATGGGCAATGTTCAAGAAGTGGCCACTCTCTCTTGCAA 892
Query 1085 AGTCTCCAAGAAGAAGATATTGAAGTCGGCTGAAACGTTTCTAGACCTAGGATAT-AGCA 1143
| ||| |||||||| || || || |||||| ||||| | ||||||| | ||||
Sbjct 893 A--CTCGGAGAAGAAGGTAGCCAACTCCATTGAAACATTTCTTGGTCTAGGAT-TCAGCA 949
Query 1144 GAGCTGAGTTTCTGATGATGGTTAAGCG-TTATCCTCCTTGCATTGAAT-ATTCTGTAGA 1201
||| ||| ||| | | |||||| ||||| || ||||| ||||||| || || ||| |||
Sbjct 950 GAGATGACTTTGTAAGGATGGTCAAGCGGTT-TCCTCAGTGCATTGGATTAT-CTGCAGA 1007
Query 1202 GTCTGTTAAA-AAGAAGAATGAGTTTCTGGTGAAGAAGATGAAATGGCCACGAAACGC-C 1259
|| || | || ||||||| ||||||| ||||||| |||||||| ||||||| ||| || |
Sbjct 1008 GT-TGGTGAAGAAGAAGACTGAGTTTGTGGTGAAAAAGATGAATTGGCCACTAAAGGCTC 1066
Query 1260 TTGGTTTTGCACCCTCAGGTGTTTGGAT-ACAGCATGGAGAAGAGGATTATACCAAGGTG 1318
| ||||| |||||||||| |||||| | |||||||||||||||||| | ||||||||
Sbjct 1067 T-GGTTTCAAACCCTCAGGTACTTGGATTA-AGCATGGAGAAGAGGATTGTCCCAAGGTG 1124
Query 1319 TAACATACTCGAAGCTCTCTTGTCGAAAGGA-CTGCTC--AGA-A-AGGGAAGTGAACTA 1373
|||| || || |||||||| | | |||| | ||||| ||| | | | ||| ||||
Sbjct 1125 TAACGTAATCAAAGCTCTCATCTTAAAAG-ATCTGCTTGGAGACACAAG-AAGCAAACTC 1182
Query 1374 CCTGCAGTGTCC--TCTGTTTTGTCGTGTACCGATGAAGGATTT-TTAGACAGGTATGTG 1430
||| || | || | ||||||| | ||| ||||| | | || || || | ||||||
Sbjct 1183 CCTCCACT--CCGGTATGTTTTGA--T-TACGGATGA-GAAGTTCTTGGAAATGTATGTC 1236
Query 1431 ATGAAGCAC-A--AC--G-AGCTGGTG-CCTACGTTGATGGCTATATTCACCAAAG-GTA 1482
| ||||||| | || | |||| ||| || | |||||||||||| ||||| ||| | |
Sbjct 1237 AGGAAGCACGATGACAAGCAGCTTGTGGCCGA-GTTGATGGCTATCTTCACTGAAGAGCA 1295
Query 1483 GTGTTTCATAGATCAGAAGG 1502
| ||||||||||||||||
Sbjct 1296 C-GCTTCATAGATCAGAAGG 1314
> Ahg475137 jgi|Araly1|475137|fgenesh2_kg.2__267__AT1G61980.1
Length=1322
Score = 627 bits (339), Expect = 1e-178
Identities = 997/1296 (77%), Gaps = 120/1296 (9%)
Strand=Plus/Plus
Query 245 TGTAATGTATTCTCTGATTCTCCATGGAAGAAGGTTGGTCCAATCGCAGAAAT-GCTTGA 303
||| |||||||||||||||| ||||||||||||||||||| | | |||||||| || | |
Sbjct 1 TGTCATGTATTCTCTGATTCGCCATGGAAGAAGGTTGGTCGAGTTGCAGAAATGGCGTCA 60
Query 304 GTTTGAGTGTTTCAGTGCAAAATGCATTTGTTTTGTCCAATTCCTTCTCTTCTGCTAGAG 363
||||||| ||| ||||||||| |||| | ||| |||||||| ||||| |||||| |
Sbjct 61 -TTTGAGTTTTTTAGTGCAAAAGGCATCTCCTTTATCCAATTCATTCTCCTCTGCT--A- 116
Query 364 CTGCTG-ATGT--GAGCAT-TAGAGATGGTCGAAAAGGGAAGAACTTTACAGTCTCTTAC 419
||| || | || ||| | ||||| |||||||||||| || ||||||||||||||||||
Sbjct 117 CTGTTGCACGTACGAG-TTCTAGAGTTGGTCGAAAAGGTAACAACTTTACAGTCTCTTAC 175
Query 420 CTCGTTGATTCATTGGGTTTATCTAAAAAGCTCGCTGAATCCATCTCAAGGAAAGTTAGC 479
||||||||||| ||||||||| ||| ||||||||| ||||| || |||||||||||||||
Sbjct 176 CTCGTTGATTCTTTGGGTTTAGCTAGAAAGCTCGCAGAATCGATTTCAAGGAAAGTTAGC 235
Query 480 TTTGAGGACAAGGTCAATCCTGATTCTGTTCT-AAGTCTGTTT-AGAAGTTACGGGTTCA 537
|| |||||||||| |||||||||||||||||| || ||| ||| |||||| | |||||||
Sbjct 236 TTCGAGGACAAGGCCAATCCTGATTCTGTTCTGAA-TCT-TTTGAGAAGTCATGGGTTCA 293
Query 538 CAGATTCTCAGATCTCTACCATCATTACGGATTATCCGTTATTGCTTGTAGCAGATGCTA 597
| |||||||||||||| | ||| ||||||||||||| ||||||| |||| ||||||
Sbjct 294 CTGATTCTCAGATCTCAAGCATTGTTACGGATTATCCACAATTGCTTATAGCTGATGCTG 353
Query 598 AGAAAGCACTTGGTCGCAAGCTTCAGATTCTGCAGTCTAGAGGAGCTTCAAGCTCTGAGA 657
||||| | || |||| |||||||||| || |||||||||||| ||||||||||||||||
Sbjct 354 AGAAATCCCTGGGTCCCAAGCTTCAGTTTTTGCAGTCTAGAGAAGCTTCAAGCTCTGAGC 413
Query 658 TCACTGAGATTGTTTCTACA-GTACCGAGAATCTTAGGAAAGA-A----AT----CTATT 707
|||||||||||||||| ||| || |||| |||||| ||||||| | | ||||
Sbjct 414 TCACTGAGATTGTTTC-ACAAGTTCCGAAAATCTTGGGAAAGAGAGGGCACAAAACTATC 472
Query 708 A-CTGTATACTATGATG-CTGTCAAAGACA-TTATAGTAGCC-GATACGAGTTC---GA- 759
| | |||||||||||| | ||||||||| || || || | |||| |||||| ||
Sbjct 473 AGC-GTATACTATGATTTCA-TCAAAGACACTT-TATTA-CATGATAAGAGTTCCAAGAA 528
Query 760 GT-----T-ATGA-ACTC----CCACAGGGTTCTCAGGGGAATAAAATCCGAAATGTATC 808
| | ||| | || ||||||||| || || ||| || ||| ||||| ||||
Sbjct 529 GGAAAAGTCATGTCATTCTTTTCCACAGGGTAATCTGGAGAACAAGATCAGAAATATATC 588
Query 809 GGCTTTGAGAGAATTAGGCATGCCTTCTCG-GTTGTTATTACCCTTGCTCGTCTCCAA-- 865
|| |||||||||||| || |||||| | | ||||||||| ||||||||| ||||
Sbjct 589 GGTTTTGAGAGAATTGGGAATGCCT-CACAAGTTGTTATTCCCCTTGCTCATCTCTTGTG 647
Query 866 ATCGCAGCCTGTGTGT-GGAAAAGAAAATTTTGATGCATCCCTTAAGAAGGTTGTTGAGA 924
| || | ||||| | | || |||||||| ||||| | |||||| ||||| |||||||| |
Sbjct 648 A-CGTA-CCTGTCT-TCGGTAAAGAAAAATTTGAAGAATCCCTCAAGAAAGTTGTTGACA 704
Query 925 TGGGGTTTGATCCCACCACCACTAAA-TTTGTTTTAGCTTTGCG-GATGCTTTACCAA-A 981
|||| |||||||| ||| | | ||| ||| | |||| | || | || || | || |
Sbjct 705 TGGGTTTTGATCCGACCTCTGC-AAAGTTTCTCGAAGCTCTACGAGTTG-TTCA--AAGA 760
Query 982 T-GAGCGAGAAAACGATTGAAGAAAAAGTTG-TAGTCTT-TAGAA-GTTTAGGTTTT-AC 1036
| |||||| ||||| || ||||||||||| | | | | | ||| | ||||| ||| |
Sbjct 761 TTGAGCGACAAAACAATAGAAGAAAAAGTCAAT-G-CGTAT-GAAAGGTTAGGCTTTGA- 816
Query 1037 TGTGG-ATGATGTATGGGAAATTTTCAAGAAGACTCCTT-CTGTTTTGA-A-AGTCTCCA 1092
||||| | ||||||||| | | ||||||| | || || || ||| | | | || |
Sbjct 817 TGTGGGAA-ATGTATGGGCAGTGTTCAAGAGGTGGCCAAACT-TTCTGACACA-T-TC-A 871
Query 1093 -AGAAGAAGATATTGAAGTCGGC-T-GAAACGTTTCTAGACCTAGGATAT-AGCAGAGCT 1148
||||||||||||||| | | | | ||||| ||||||| ||| |||| | | ||||| |
Sbjct 872 GAGAAGAAGATATTGA-G-CACCATTGAAACATTTCTAGGCCTGGGAT-TCACCAGAGAT 928
Query 1149 GAGTTT-CTGATGATGGTTAAGCG-TTATCCTCCTTGCATTGAAT-ATTCTGTAGAGTCT 1205
|||||| | ||| |||||||||| || ||||| |||||| || || | |||| |
Sbjct 929 GAGTTTTCC-ATGTTGGTTAAGCGCTT-TCCTCAGGGCATTGGATTATCCCC-AGAGACG 985
Query 1206 GTTAAAAAGAAGAATGAGTTTCTGGTGAAGAAGATGAAATGGCCACGAAACGCCTTGGTT 1265
||||||||||||| ||||||||||| ||||||||||| |||||| ||| || ||||||
Sbjct 986 GTTAAAAAGAAGACCGAGTTTCTGGTCAAGAAGATGAACTGGCCAATAAAGGCTTTGGTT 1045
Query 1266 TTGCACCCT-CAGGTGTTTGGATACAGCATGGAGAAGAGGATTATACCAAGGTGTAACAT 1324
| ||||| | | | |||||||||||||||||||||||| | | |||||| ||||| |
Sbjct 1046 TCAAACCCTGC-GATACTTGGATACAGCATGGAGAAGAGGACTGTCCCAAGGGGTAACGT 1104
Query 1325 ACTCGAAGCTCTCTTGTCGAAAGGACTGCTCAGAAAGGGAAGTGAACTACCTGC-AGTGT 1383
| || |||||||| | || |||||| || || | | ||||||||| ||| | | | |
Sbjct 1105 AATCAAAGCTCTCATCTCCAAAGGATTGATC-G---G--AAGTGAACTCCCTTCGA-TAT 1157
Query 1384 C-CTCTGT-TTTGTCGTGTACCGATGAAGGAT-TT-TTAGACAGGTATGTGATGAAGCAC 1439
| | ||| ||| | |||||| || | || | || ||| |||||||||||| ||| |||
Sbjct 1158 CACA-TGTCTTTATA-TGTACCAATCA-GG-TGTTCTTAAACAGGTATGTGAAGAATCAC 1213
Query 1440 -A--AC--G-AGCTGGTGCCT-ACGTTGATGGCTAT 1468
| || | |||||||| || | ||||||||||||
Sbjct 1214 GAGGACAAGCAGCTGGTGACTGA-GTTGATGGCTAT 1248
> Ahg924793 jgi|Araly1|924793|scaffold_200354.1
Length=1203
Score = 512 bits (277), Expect = 3e-144
Identities = 911/1199 (76%), Gaps = 115/1199 (10%)
Strand=Plus/Plus
Query 365 TGCTGATGTGAG-CATTAGAGATGGTCGAAAAGGGAAGAAC-TTTACAGTCTCTTACCTC 422
|||||||||||| | |||||||||||| |||||| |||||| ||||| ||||||||||||
Sbjct 2 TGCTGATGTGAGTC-TTAGAGATGGTCAAAAAGGTAAGAACTTTTACTGTCTCTTACCTC 60
Query 423 GTTGATTCA-TTGGGTTTATCTAAAAAGCTCGCTGAATCCA-TCTCAAGGAAAGTTAGCT 480
||||||||| || |||||| |||||||| | || ||||| | | | ||| ||||| || |
Sbjct 61 GTTGATTCACTT-GGTTTAGCTAAAAAGGTAGCAGAATCGATTAT-AAGAAAAGTCAG-T 117
Query 481 TT-GAGGACAAGGTCAATCCTGATTCTGTTCTAAGTCTGTTT-AGAAGTTACGGGTTCAC 538
|| ||| |||||| |||||||||||||||||| ||||| ||| |||||| | ||||||||
Sbjct 118 TTCGAGAACAAGGGCAATCCTGATTCTGTTCTGAGTCT-TTTGAGAAGTCATGGGTTCAC 176
Query 539 AGATTCTCAGATCTCTACCATCATTACGGATTATCCGTTATTGCTTGTAGCAGATGCT-A 597
|||| |||||||||| | |||||||||||| ||||| ||||||| ||||||||| | |
Sbjct 177 AGATACTCAGATCTCCAGCATCATTACGGACTATCCACTATTGCTCATAGCAGATGGTGA 236
Query 598 AGAA-AGCACTTGGTCGCAAGCTTCAGATTCTGCAGTCTAGAGGAGCTTCAAGCTCTGAG 656
| || || |||||| ||| ||| || || |||||||||||||||||||||||||||||
Sbjct 237 A-AATTCCA-TTGGTCCCAAACTTAAGTTTTTGCAGTCTAGAGGAGCTTCAAGCTCTGAG 294
Query 657 ATCACTGAGATTGTTTCT-ACAGTACCGAGAATCTTAGGAAAGA-A----AT----CTAT 706
|||| |||||||||||| | ||| ||||||||||| ||||||| | | ||||
Sbjct 295 CTCACAGAGATTGTTTCTGA-AGTTCCGAGAATCTTGGGAAAGAGAGGGCACAAAACTAT 353
Query 707 TA-CTGTATACTATGATGCTGTCAAAGACATTATAGTAGCCGATACGAGTTC---G---- 758
| | | |||||||||| | |||||||| ||| ||| ||| |||| |||||| |
Sbjct 354 CAGCAG-ATACTATGATACCGTCAAAGAGATTGTAGAAGCGGATAAGAGTTCCAAGTTCG 412
Query 759 A---GTTATGA-ACTC----CCACAGGGTTCTCAG--GG-GAATAAAATCCGAA-A--TG 804
| |||||| | || ||||||||| | || || ||| || || ||| | ||
Sbjct 413 AAAAGTTATGTCATTCTTTGCCACAGGGTAGTAAGCAGGAGAACAACATTAGAAGAAATG 472
Query 805 TATCGGCTTTGAGAGAATTAGGCATGCCTTCTC-GGTTGTTATTAC-CCTTGCTCGTCTC 862
| | || |||||||||||| ||| ||||| | ||||| |||| | |||||||| ||||
Sbjct 473 TTTTGGTTTTGAGAGAATTGGGCGTGCCT-CAGAGGTTGCTATT-CTCCTTGCTCATCTC 530
Query 863 C-A-AATCGCAGCCTGTGTGTGGAAAAGAAA-ATTTTGATGCATCCCTTAAGAAGGTTGT 919
| || || | | ||| ||||||||| ||| |||| || | ||| || || ||||||||
Sbjct 531 TGATAA-CGGA-CATGTATGTGGAAAAAAAAGATTT-GAAGAATCACTCAACAAGGTTGT 587
Query 920 TGAGATGGGGTTTGATCCCACCACCACTAAATTT-GTTT-TAGCTTTGCGGATGCT-TTA 976
||||||||| |||||||| ||||| | || ||| || | ||| ||| | | | ||
Sbjct 588 TGAGATGGGTTTTGATCCAACCACTGC-AAGTTTTGTCCGT-GCTCTGC--ACGTTATT- 642
Query 977 CCAA--ATG-AGCGAGAAAACGATTGAAGAAAAAGTTGTAGTCT-T-TAGAAGTTTAGGT 1031
| || || ||||| ||||| || |||||||| || | ||| | || ||| |||||
Sbjct 643 C-AAGGATTTAGCGACAAAACAATAGAAGAAAAGGTCA-A-TCTCTATAAAAGGTTAGGC 699
Query 1032 TTT-ACTGTGG-ATGATGTATGGGAAATTTTCAAGAAGACTCCTTCTGTTT-T-GAAAGT 1087
||| | ||||| | |||||||||||||| ||||||||| ||| | ||| | | | |
Sbjct 700 TTTGA-TGTGGGA-GATGTATGGGAAATGTTCAAGAAGTTTCCAACA-TTTCTAGGAC-T 755
Query 1088 CTCCAAGAAGAAGATATTGAAGTCGGCTGAAACGTTTCTA-GACCTAGGATAT-AGCAGA 1145
||| ||||||| ||| || || |||||| ||| || | |||||||| | | ||||
Sbjct 756 CTCGGAGAAGAAAATAGCCAACTCCATTGAAACATTTGTAAG-CCTAGGAT-TCACCAGA 813
Query 1146 GCTGAGTTTCTGATGATGGTTAAGCG-TTATCCTCCTTGCATTGAATATTCTGTAGAGTC 1204
| |||| || || | ||||| ||||| || |||||| ||||||| || ||||| ||||||
Sbjct 814 GATGAGATTGTGGTCATGGTCAAGCGCTT-TCCTCCGTGCATTGGATGTTCTGCAGAGTC 872
Query 1205 TGTTAAAAAGAAGAATGAGTTTCTGGTGAAGAAGATGAAATGGCCACGAAACGCCT-TGG 1263
|| || ||||||| ||| |||||||| ||||||||||| ||||||| ||| || | |||
Sbjct 873 GGTGAAGAAGAAGACTGAATTTCTGGTAAAGAAGATGAATTGGCCACTAAAGGC-TGTGG 931
Query 1264 TTTTGCA--CCCTCAGGTGTTTGGATACAGCATGGAGAAGAGGATTATACCAAGGTGTAA 1321
|| || ||||||||| ||||||||||| | |||||||||| | | |||||||||||
Sbjct 932 CTT--CATTCCCTCAGGTAATTGGATACAGCCTAGAGAAGAGGACTGTCCCAAGGTGTAA 989
Query 1322 CATACTCGAAGCTCTCTTGTCGAAAGGACTGCTCAGAAAGGGAAGTGAACTACCTGCAGT 1381
|| || ||| |||| | || |||||| ||||| | | ||||||||| ||| || |
Sbjct 990 TGTAATCAAAGTTCTCATCTCAAAAGGATTGCTC-G---G--AAGTGAACTCCCTCCATT 1043
Query 1382 GTCC-TCTGTTTTGTCG-TGTACCGATGAAGGATTT-TTAGACAGGTATGTGATGAAGCA 1438
| || | ||| ||||| | ||||||| || ||| ||| ||| ||||||| |||| ||
Sbjct 1044 G-CCGTGTGTGTTGTCAAT-TACCGATCCAGC-TTTCTTAAACAAGTATGTGGTGAAACA 1100
Query 1439 C-A--AC--G-AGCTGGTGCCT-ACGTTGATGGCTATATTCACCAAAGGTAGTGTTTCA 1490
| || | |||| |||| | | ||| || ||||| ||||||||| | ||||||||
Sbjct 1101 TGATGACACGCAGCTCGTGCGTGA-GTTAATCGCTATCTTCACCAAAAATCGTGTTTCA 1158
> Ahg924783 jgi|Araly1|924783|scaffold_200344.1
Length=1435
Score = 484 bits (262), Expect = 7e-136
Identities = 684/875 (78%), Gaps = 80/875 (9%)
Strand=Plus/Plus
Query 254 TTCTCTGATT-CTCCATGGAAGAAGGTTGGTCCAATCGCAGAAA-TGCTTGAGTTTGAGT 311
|||||||||| || ||||||| |||||||||||| | |||||| || | | ||| |||
Sbjct 32 TTCTCTGATTCCT-CATGGAAAAAGGTTGGTCCAGTTTCAGAAAGGGCATAACTTT-AGT 89
Query 312 GTTTCAGT---G------CAAAATGCA-T-T-TG-TTTTGTCCAATTCCTTCTC-T-T-C 355
|| ||||| | ||||||| | | | || |||| |||||||||||||| | |
Sbjct 90 GTCTCAGTGAAGCTTTTCCAAAATGTATTCTCTGCTTTT-TCCAATTCCTTCTCATCTGT 148
Query 356 TGCTAGAGCTGC-TGATGTGAGCATTAGAGATGGTCGAAAAGGGAAGAACTTTACAGTCT 414
|||||| || | |||||||||||||||||||||||||||||| || |||||||||||||
Sbjct 149 TGCTAGTTCT-CATGATGTGAGCATTAGAGATGGTCGAAAAGGTAACAACTTTACAGTCT 207
Query 415 CTTACCTCGTTGATTCA-TTGGGTTTATCTAAAAAGCTCGCTGAATCCATCTCAAGGAAA 473
|||||||| |||||||| |||| |||| ||||||||||||| || || || |||| |||
Sbjct 208 CTTACCTCATTGATTCACTTGG-TTTAACTAAAAAGCTCGCAGAGTCGATTTCAATAAAA 266
Query 474 GTTAGCTTT-GAGGACAAGGTCAATCCTGATTCTGTTCTAAGTCTGTTT-AGAAGTTACG 531
|| || ||| ||| |||||| |||||||||||||||||| ||||| ||| |||||| | |
Sbjct 267 GTCAG-TTTCGAGAACAAGGCCAATCCTGATTCTGTTCTGAGTCT-TTTGAGAAGTCATG 324
Query 532 GGTTCACAGATTCTCAGATCTCTACCATCATTACGGATTATCCGTTATTGCTTGTAGCAG 591
|||| ||||||||||||||||| | |||||||||||||||||| ||||||| ||||||
Sbjct 325 GGTTTACAGATTCTCAGATCTCCAACATCATTACGGATTATCCACTATTGCTCATAGCAG 384
Query 592 ATGCTAAGAAAGCACTTGGTCGCAAGCTTCAGATT-CTGCAGTCTAGAGGAGCTTCAAGC 650
||||| |||| | ||||||| ||||||| || || |||||||| |||||||||||||||
Sbjct 385 ATGCTGAGAATTCCCTTGGTCCCAAGCTTAAG-TTGCTGCAGTCAAGAGGAGCTTCAAGC 443
Query 651 TCTGAGATCACTGAGATTGTTTCTACAGTACCGAGAATCTTAG----GAAAG---A-AAT 702
|||||| |||||||||||||||||| ||| || | |||||||| ||||| | ||
Sbjct 444 TCTGAGCTCACTGAGATTGTTTCTAAAGTTCCTAAAATCTTAGCAATGAAAGGGGACAAA 503
Query 703 C-TATTA-CTGTATACTATGATG-CTGTCAAAGACATTATAGTAGCCGATACGAGTTCGA 759
||| | | | |||||||||| | |||||||| ||| ||| ||| |||| |||||| |
Sbjct 504 AGTATCAGCAG-ATACTATGATATC-GTCAAAGAGATTGTAGAAGCGGATAAGAGTTCCA 561
Query 760 -GTT--A----T-GAA-C-T-C----CCACAGGGTTCTCAG--GG-GAATAAAATCCGAA 801
||| | | | | | | ||| ||||| | || || |||||||||| |||
Sbjct 562 AGTTCGAAAAGTTGTGTCATTCTTTGCCAGAGGGTAGTAAGCAGGAGAATAAAATCAGAA 621
Query 802 ATGTATCGGCTTTGAGAGAATTAGGCATGCCTTCTC-GGTTGTTATTAC-CCTTGCTCGT 859
|||| | || |||||||||||| ||| ||||| | |||||||||| | |||||||| |
Sbjct 622 ATGTTTTGGTTTTGAGAGAATTGGGCGTGCCT-CAAAGGTTGTTATT-CTCCTTGCTCAT 679
Query 860 CTCCAAATCGC-A-GCCTGTGTGTGGAAAAGAAAATTTTGATGCATCCCTTAAGAAGGTT 917
||| || || | | | ||| |||||||||||||| ||||| | ||| || ||||||||
Sbjct 680 CTCTAA-TCACCATGTCTGC-TGTGGAAAAGAAAAATTTGAAGAATCACTCGAGAAGGTT 737
Query 918 GTTGAGATGGGGTTTGATCCCACCACCACTAAA-TTTGTTTTAGC-TT-TGCGGAT-GCT 973
|||| |||||| ||||||||||||||| | ||| ||||| ||| || ||| || | |
Sbjct 738 GTTGGGATGGGTTTTGATCCCACCACCCC-AAAGTTTGTGGAAGCCTTATGC--ATTG-T 793
Query 974 TTACCAAATGAGCGAGAAAACGATTGAAGAAAAAGTTGTA-GTCTTTAGAAGTTTAGGTT 1032
|||| | ||||||| |||| | | |||||||| || | |||| || ||| || || |
Sbjct 794 TTACGGATTGAGCGACAAAAGGCTAGAAGAAAAC-TTCAATGTCTATAAAAGGTTCGGCT 852
Query 1033 TTACTGTGGATGATGTATGGGAAATTTTCAAGAAG 1067
| ||||| | ||| |||||||| |||||||||||
Sbjct 853 TAACTGTAAACGATATATGGGAACTTTTCAAGAAG 887
> Ahg315177 jgi|Araly1|315177|fgenesh1_pm.C_scaffold_2000210
Length=2439
Score = 484 bits (262), Expect = 7e-136
Identities = 596/747 (80%), Gaps = 63/747 (8%)
Strand=Plus/Plus
Query 249 ATGTATTCTCTGATTCTCCATGGAAGAAGGTTGGTCCAATCGCAGAAAT---G---CTTG 302
|||||||||||||||||||||||||||| ||||||||| | ||||||| | ||||
Sbjct 1 ATGTATTCTCTGATTCTCCATGGAAGAAAGTTGGTCCAGTTTCAGAAATGGCGTCACTTG 60
Query 303 A--GTTT-GAGTGTTTC-AGTGCAAAATGCATTTG-TTTTGTCCAATTCCTTCT-CT--T 354
| |||| | ||| || | ||||||| || || |||| ||||||||||||| ||
Sbjct 61 AGGGTTTCG-GTGAATCTTTTCCAAAATGGATCTGCTTTT-TCCAATTCCTTCTCCTCCG 118
Query 355 CTGCTAGAGCTGCTGATGTGAG-CATTAGAGATGGTCGAAAAGGGAAGAACTTTACAGTC 413
||||||| ||| |||||||||| | ||||| |||||||||||| || ||||||||||||
Sbjct 119 CTGCTAGTGCTTCTGATGTGAGTC-CTAGAGTTGGTCGAAAAGGAAACAACTTTACAGTC 177
Query 414 TCTTACCTCGTTGATTCATTGGGTTTATCTAAAAAGCTCGCTGAATCCATCTCAAGGAAA 473
||||||||||||||||||||||||||| |||| |||||||| ||||| || |||||||||
Sbjct 178 TCTTACCTCGTTGATTCATTGGGTTTACCTAACAAGCTCGCAGAATCTATTTCAAGGAAA 237
Query 474 GTTAGCTTTGAGGACAAGGTCAATCCTGATTCTGTTCT-AAGTCTGTTT-AGAAGTTACG 531
|| ||||| |||||||||| |||||||| ||||||||| || ||| ||| |||||| | |
Sbjct 238 GTCAGCTTCGAGGACAAGGGCAATCCTGTTTCTGTTCTGAA-TCT-TTTGAGAAGTCATG 295
Query 532 GGTTCACAGATTCTCAGATCTCTACCATCATTACGGATTATCCGTTATTGCTTGTAGCAG 591
|||||||||||||||||||||| | |||||||||||||||||| |||||||| |||| |
Sbjct 296 GGTTCACAGATTCTCAGATCTCAAGCATCATTACGGATTATCCACTATTGCTTATAGCTG 355
Query 592 ATGCTAAGAAAGCACTTGGTCGCAAGCTTCAGATTCTGCAGTCTAGAGGAGCTTCAAGCT 651
||||| | ||| ||||||||| |||||||||| || ||||||| ||||||||||||||||
Sbjct 356 ATGCTGACAAATCACTTGGTCCCAAGCTTCAGTTTTTGCAGTCCAGAGGAGCTTCAAGCT 415
Query 652 CTGAGATCACTGAGATTGTTTCTACAGTACCGAGAATCTTAGGAAAGAAA---------T 702
||||| ||||||||||||||||| |||| |||| |||||| ||||||||| |
Sbjct 416 CTGAGCTCACTGAGATTGTTTCTGCAGTTCCGAAAATCTTGGGAAAGAAAGAGGGAAAAT 475
Query 703 CTATTA-CTGTATACTATGATG-CTGTCAAAGACATTATAGTAGCCGATACGAGTTCGAG 760
|||| | | | |||||||||| | ||||||| |||||||| ||| |||| |||||| |
Sbjct 476 CTATCAGC-GCATACTATGATTTC-GTCAAAGTCATTATAGAAGCAGATAAGAGTTCCAA 533
Query 761 TT----ATG-A-A---C-T-C----CCACAGGGTTCTCAG--GG-GAATAAAATCCGAAA 802
|| | | | | | | | ||| ||||| | || || ||||||||| ||||
Sbjct 534 TTTGGGAAGGATATGTCATTCTTTGCCAGAGGGTAGTAAGCAGGAGAATAAAATTAGAAA 593
Query 803 TGTATCGGCTTTGAGAGAATTAGGCATGCCTTCTC-GG-TTGTTATTACCC-TTGCT-CG 858
||| | || |||||||||||| || ||||| | || || ||||| | | ||||| |
Sbjct 594 TGTTTTGGTTTTGAGAGAATTGGGGGTGCCT-CAGAGGGTT-TTATT-CTCATTGCTTC- 649
Query 859 TCTCCAAATCGCAGCC-TGTGTGTGGAAAAGAAAATTTTGATGCATCCCTTAAGAAGGTT 917
| ||| | | |||| | ||| |||||||||||||| ||| | | ||| || ||||||||
Sbjct 650 TATCCGA-TGGCAGACATGTTTGTGGAAAAGAAAAATTTAAAGAATCACTCAAGAAGGTA 708
Query 918 GTTGAGATGGGGTTTGATCCCACCACC 944
||| |||| || |||||||| ||||||
Sbjct 709 GTTAAGATTGGTTTTGATCCAACCACC 735
> Ahg338172 jgi|Araly1|338172|fgenesh1_pg.C_scaffold_2000271
Length=1056
Score = 451 bits (244), Expect = 7e-126
Identities = 619/793 (78%), Gaps = 53/793 (7%)
Strand=Plus/Plus
Query 492 GTCAATCCTGATTCTGTTCTAAG-TCTGT-TTAGAAGTTACGGGTTCACAGATTCTCAGA 549
|||||| ||||||| ||||| | ||| | |||||||||| |||||||||||||||||||
Sbjct 214 GTCAATGCTGATTCGGTTCT-GGATCT-TCTTAGAAGTTATGGGTTCACAGATTCTCAGA 271
Query 550 TCTCTACCATCATTACGGA-TTATCCGTTATTGCTTGTAG-CAGATGCTAAGAAAGCACT 607
|||| | |||||||| ||| | |||| | ||||| | | || || || || | | ||
Sbjct 272 TCTCCAGCATCATTA-GGAGTGATCCACAAGTGCTTATTGCCA-ATTCTGCGACATCCCT 329
Query 608 TGG-TCGCAAGCTTCAGATTCTGCAGTCTAGAGGAGCTTCAAGCTCTGAGATCACTGAGA 666
|| || |||||| || || ||||||| ||||||||||||||||||||| |||||||||
Sbjct 330 GGGTTC-AAAGCTTGAGTTTTTGCAGTCCAGAGGAGCTTCAAGCTCTGAGCTCACTGAGA 388
Query 667 TTGTTTCTACAGTACCGAGAATCTT-AGG-A-A-A----G-AAATCTATTA-CTGTATAC 716
||||||||||||| || | |||||| || | | | | |||||||| | | | ||||
Sbjct 389 TTGTTTCTACAGTTCCTAAAATCTTGGGGAAGAGAGCGGGCAAATCTATCAGCAG-ATAC 447
Query 717 TATGA-TGCTGTCAAAGACATTATAGTA-GCCGATACGAGTT-CGAGTTATG--AA-CTC 770
||||| | | |||||| |||||||| | || |||| ||||| | || |||| || |
Sbjct 448 TATGATTTC-ATCAAAGTCATTATAG-AGGCGGATAAGAGTTCCAAG-TATGTAAAGTTA 504
Query 771 CCACA-GGGTT--CTCAGGGGAATAAAATCCGAAATGTATCGGCTTTGAGAGAATTAGGC 827
| || || | || || || || ||| ||||||| | || ||||||||| || ||
Sbjct 505 TCTCATTCTTTGCCACAAGGTAACAAGATCAGAAATGTTTTGGTTTTGAGAGATTTGGGT 564
Query 828 ATGCCTTC-TCGGTTGTTATTACCCTTGCTCGTCTCCAAATCGCAGCCTGTGTGTGGAAA 886
|||| || | ||||||||| |||||| ||||||| | ||||| |||||||||||
Sbjct 565 GTGCC-TCGAAAGCGGTTATTACCTTTGCTCATCTCCAACTTTCAGCCCGTGTGTGGAAA 623
Query 887 AGAAAATTTTGATGCATCCCTTAAGAAGGTTGTTGAGATGGGGTTTGATCCCACCACCAC 946
|||||||||||||||||| || |||||||| ||||||||||| |||||||| |||||| |
Sbjct 624 AGAAAATTTTGATGCATCACTCAAGAAGGTCGTTGAGATGGGTTTTGATCCAACCACCTC 683
Query 947 TAAA-TTTGTTTTA-GCTTTGCGGATGCTTTACCAAATGAGCGAGAAAACGATTGAAGAA 1004
|| ||||| | ||||||| |||||||||||||||||||| |||||||||||||||
Sbjct 684 -AACGTTTGTGC-ACGCTTTGCACATGCTTTACCAAATGAGCGACAAAACGATTGAAGAA 741
Query 1005 AAAGTTGTAGTCTTTAGAAGTTTAGGTTTTACTGTGGATGATGTATGGGAAATTTTCAAG 1064
||||||| ||||| ||||||| ||||||| || ||||| |||||||||| ||| ||||||
Sbjct 742 AAAGTTGAAGTCTATAGAAGTATAGGTTTCACCGTGGACGATGTATGGGCAATGTTCAAG 801
Query 1065 AAGACTCCTT-CTGTTTTGAAAGTCTCCAAGAAGAAGATATTGAAGTCGGCT-GAAACGT 1122
||| || || | | || | ||| |||||||| || || || | | ||||| |
Sbjct 802 AAGTGGCCACGCTCTCT-GAGACACTCGGAGAAGAAGGTAGCCAACTCCG-TAGAAACAT 859
Query 1123 TTCTAGACCTAGGATAT-AGCAGAGCTGAGTTTCTGATGATGGTT-AAGCG-TTATCCTC 1179
|||||| ||||||| | ||||||| ||||||| |||||||| || ||||| || |||||
Sbjct 860 TTCTAGGTCTAGGAT-TCAGCAGAGATGAGTTTTTGATGATG-TTCAAGCGGTT-TCCTC 916
Query 1180 CTTGCATTGAATATTCTGT-AGAGTCT-GTTAAAAAGAAGAATGAGTTTCTGGTGAAGAA 1237
||||||| |||||| | ||||| | || || ||||||| |||||||||||||||| |
Sbjct 917 AGTGCATTGGATATTC-GACAGAGT-TAGTGAAGAAGAAGACTGAGTTTCTGGTGAAGGA 974
Query 1238 GATGAAATGGCCA 1250
|||||| ||||||
Sbjct 975 GATGAATTGGCCA 987
> Ahg315190 jgi|Araly1|315190|fgenesh1_pm.C_scaffold_2000223
Length=1338
Score = 289 bits (156), Expect = 6e-77
Identities = 271/326 (83%), Gaps = 10/326 (3%)
Strand=Plus/Plus
Query 249 ATGTATTCTCTGATTCTCCATGGAAGAAGGTTGGTCCAATCGCAGAAA-TGCTTGAGTTT 307
|||||||||||||| | ||||||||||||||||||||| | | ||||| ||| | | |||
Sbjct 1 ATGTATTCTCTGATACACCATGGAAGAAGGTTGGTCCAGTTGGAGAAATTGCCT-AATTT 59
Query 308 GAGTGTTTCAGTGCAAAATGCAT-TTGTTTTGTCCAATTCCTTCTCTTCTGCTAGAGCTG 366
|| ||||||||||||| |||| || |||||| ||||| ||||||| | |||| | ||
Sbjct 60 CAGAGTTTCAGTGCAAACCGCATCTT-CTTTGTCAAATTCGTTCTCTTTTACTAGTGTTG 118
Query 367 CTGATGTGAGCATTAGAGATGGTCGAAAAGGGAAGAACTTTA-CAGTCTCTTACCTCGTT 425
|||||| |||| |||||||||||| |||||||| ||||||| || ||||||||||||||
Sbjct 119 CTGATGCGAGCCTTAGAGATGGTCTTAAAGGGAACAACTTTACCA-TCTCTTACCTCGTT 177
Query 426 GATTCATTGGGTTTATCTA-AAAAGCTCGCTGAATCCATCTCAAGGAAAGTTAGCTTTGA 484
||||||||||||||| | | |||| ||||| ||||| ||||||| |||||| ||| | ||
Sbjct 178 GATTCATTGGGTTTAACCACAAAA-CTCGCAGAATCGATCTCAAAGAAAGTCAGCCTCGA 236
Query 485 GGACAAGGTCAATCCTGATTCTGTTCTAAGTCTGT-TTAGAAGTTACGGGTTCACAGATT 543
|||||||| ||||| ||||||||| | ||||| | ||| |||||| || |||||| | |
Sbjct 237 GGACAAGGAAAATCCGGATTCTGTTGTGAGTCT-TCTTACAAGTTATGGCTTCACAAAGT 295
Query 544 CTCAGATCTCTACCATCATTACGGAT 569
||||||| || | ||||||||||||
Sbjct 296 CTCAGATTTCAAGTATCATTACGGAT 321
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 64943867725
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5