BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G62200.1 Length=1909 Score E Sequences producing significant alignments: (Bits) Value Ahg475124 jgi|Araly1|475124|fgenesh2_kg.2__254__AT1G62200.1 2643 0.0 Ahg484127 jgi|Araly1|484127|fgenesh2_kg.5__119__AT2G02040.1 704 0.0 Ahg935936 jgi|Araly1|935936|scaffold_500127.1 361 1e-98 > Ahg475124 jgi|Araly1|475124|fgenesh2_kg.2__254__AT1G62200.1 Length=1839 Score = 2643 bits (1431), Expect = 0.0 Identities = 1713/1845 (93%), Gaps = 35/1845 (2%) Strand=Plus/Plus Query 30 TGAATTCGAATGAAGAAGACGAAAGGAGAAT--T-CTTGACGTTGAAGAATCTCTTCTTA 86 ||||||| ||| ||||||||||||| ||| | ||||||||||||||||||||||||| Sbjct 2 TGAATTCCAAT---GAAGACGAAAGGATAATAATCCTTGACGTTGAAGAATCTCTTCTTA 58 Query 87 CACAGGAGGAAGTGAACAATCACTTGACCGGATTGTCTTCTACAGCTGAAGATGGTTCTA 146 |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| Sbjct 59 CACAGGAGGAAGTGAACAATGTCTTGACCGGATTGTCTTCTTCAGCTGAAGATGGTTCTG 118 Query 147 TTGACATTTATGGAAACCCACCATCGAAGAAGAAGACAGGAAACTGGAAAGCTTGTCCCT 206 |||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||| Sbjct 119 TTGACATTTATGGAAACCCACCATCGAAGAAGAAAACTGGAAATTGGAAAGCTTGTCCCT 178 Query 207 TTATTCTTGGAAACGAATGTTGTGAGAGATTAGCTTACTATGGAATTGCCAAGAATCTAA 266 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 179 TTATTCTTGGAAACGAATGTTGTGAGAGACTAGCTTACTATGGAATTGCCAAGAATCTAA 238 Query 267 TCACTTACTACACAAGTGAATTACACGAGTCCAATGTTTCTGCAGCTAGTGACGTTATGA 326 ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct 239 TCACTTATTACACAAGTGAATTACACGAGTCCAATGTTTCTGCAGCTAGCGACGTCATGA 298 Query 327 TTTGGCAAGGAACTTGCTATATCACACCTCTCATTGGAGCTGTTATAGCTGATTCTTACT 386 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 299 TTTGGCAAGGAACTTGCTATATCACACCTCTAATTGGAGCTGTTATAGCTGATTCTTACT 358 Query 387 GGGGAAGATACTGGACCATTGCTTCTTTCTCTGCTATTTATTTCATTGGAATGGCTTTGT 446 |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| Sbjct 359 GGGGAAGATACTGGACTATTGCTTCTTTCTCTGCTATTTATTTCTTTGGAATGGCTTTGT 418 Query 447 TGACACTCTCGGCTTCACTTCCGGTTTTAAAGCCAGCGGCATGTGCTGGCGTTGCTGCGG 506 ||||||||||||||||| |||||| |||||||||||||| ||||| |||| ||| ||||| Sbjct 419 TGACACTCTCGGCTTCAGTTCCGGGTTTAAAGCCAGCGGAATGTGTTGGCTTTGTTGCGG 478 Query 507 CTCTATGCTCACCAGCAACAACGGTTCAGTATGCGGTTTTCTTTACAGGGCTTTACCTTA 566 ||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct 479 TTCTATGCCCACCAGCAACAACGGTTCAGTATGCGGTTTTCTTTTCAGGACTTTACCTTA 538 Query 567 TTGCTCTTGGTACTGGAGGTATCAAACCATGTGTATCATCTTTTGGTGCTGATCAGTTTG 626 |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 539 TTGCACTTGGTACTGGAGGTATCAAACCATGTGTTTCATCTTTTGGTGCTGATCAGTTTG 598 Query 627 ATGATACTGACCCGAGGGAACGAGTTAGAAAAGCTTCTTTCTTTAACTGGTTTTACTTCT 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 599 ATGATACTGACCCGAGGGAACGAGTTAGAAAAGCTTCTTTCTTTAACTGGTTTTACTTCT 658 Query 687 CCATCAACATTGGTTCATTTATCTCATCCACTTTGTTAGTTTGGGTTCAAGAAAATGTCG 746 | |||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||| Sbjct 659 CTATCAACATTGGTTCATTTGTCTCATCCACTTTGCTAGTTTGGGTTCAAGAGAATGTCG 718 Query 747 GGTGGGGACTCGGTTTCTTGATTCCCACCGTGTTTATGGGAGTCTCTATTGCGAGTTTCT 806 |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| Sbjct 719 GGTGGGGACTCGGTTTCTTGATTCCCACCGTGTTTATGGGAGCCTCTATCGCGAGTTTCT 778 Query 807 TCATTGGAACTCCGCTTTATCGGTTTCAGAAACCGGGAGGTAGTCCGATTACTAGAGTTT 866 |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| Sbjct 779 TCATTGGAACTCCGCTTTATAGGTTTCAGAAACCGGGAGGTAGCCCGATTACTAGAGTTT 838 Query 867 GCCAAGTTCTTGTAGCTGCATACCGTAAATTGAAGCTTAATCTCCCTGAAGATATCTCAT 926 ||||||||||||||||||||||||| |||| | | || ||||||||||| |||||||||| Sbjct 839 GCCAAGTTCTTGTAGCTGCATACCGCAAATGGTATCTCAATCTCCCTGAGGATATCTCAT 898 Query 927 TTCTGTATGAAACACGAGAGAAAAACTCCATGATTGCTGGAAGCAGGAAGATTCAACACA 986 ||||||||||||||| |||||||| |||||| ||||||||||||||||||||||| |||| Sbjct 899 TTCTGTATGAAACACAAGAGAAAAGCTCCATAATTGCTGGAAGCAGGAAGATTCAGCACA 958 Query 987 CTGACGGTTACAAG----T-T-T--C---TT---G-------ACAAAGCTGCTGTTATCT 1025 ||| |||||||||| | | | | || | |||||||||| ||||||| Sbjct 959 CTGGCGGTTACAAGAAAATATCTGTCCCCTTTCAGTGTCTTGACAAAGCTGCCGTTATCT 1018 Query 1026 CAGAATATGAATCTAAATCCGGTGCTTTTTCCAACCCATGGAAGCTATGTACTGTAACTC 1085 ||||| ||||||| ||||||||||| |||||||||||||||||||||||||| ||||||| Sbjct 1019 CAGAAGATGAATCGAAATCCGGTGCCTTTTCCAACCCATGGAAGCTATGTACCGTAACTC 1078 Query 1086 AAGTCGAAGAAGTTAAGACTCTAATCCGTATGTTTCCAATCTGGGCCTCGGGGATCGTCT 1145 |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||| Sbjct 1079 AAGTCGAAGAAGTTAAGATTCTGATCCGTATGTTTCCAATCTGGGCCTCGGGGATCATCT 1138 Query 1146 ACTCGGTCCTATATTCACAGATTTCCACTCTATTCGTGCAACAAGGACGGTCCATGAACC 1205 |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| Sbjct 1139 ACTCGGTCCTATATTCACAGATTTCCACTCTATTTGTGCAACAAGGACGGGCCATGAACC 1198 Query 1206 GAATAATCCGT-TCTTTCGAGATCCCTCCTGCTTCATTCGGGGTTTTCGACACACTTATC 1264 | ||||||| | ||||| ||||||||||| |||||||| ||||||||||||||||||||| Sbjct 1199 GGATAATCC-TCTCTTTTGAGATCCCTCCCGCTTCATTTGGGGTTTTCGACACACTTATC 1257 Query 1265 GTGCTCATATCCATCCCAATATATGACCGTTTCCTCGTACCCTTTGTAAGACGGTTCACA 1324 |||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||| Sbjct 1258 GTGCTCATATCCATCCCAATCTATGACCGTTTCATCGTACCCTTTGTGAGACGGTTCACA 1317 Query 1325 GGGATACCAAAAGGGTTAACTGATCTGCAGCGAATGGGCATTGGTCTTTTTCTCTCTGTC 1384 || |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct 1318 GGTATACCAAAAGGGTTAACTGATCTGCAGCGAATGGGCATTGGTCTTTTTATCTGTGTC 1377 Query 1385 CTAAGCATTGCAGCTGCAGCTATTGTTGAGACAGTGCGGTTGCAGCTTGCTCAAGACTTT 1444 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct 1378 CTAAGCATTGCAGCTGCAGCTATTGTTGAGACAGTGCGGTTGCAGCTCATTCAAGACACT 1437 Query 1445 GTTGCAATGAGCATATTTTGGCA-GATCCCTCAGTACATACTAATGGGAATAGCAGAGGT 1503 || ||||||||||||||||||| | |||||||||| |||||||||||||| |||||||| Sbjct 1438 ATTTCAATGAGCATATTTTGGCAAG-TCCCTCAGTATATACTAATGGGAATTGCAGAGGT 1496 Query 1504 CTTTTTCTTCATTGGTCGAGTTGAGTTTTTCTATGATGAATCTCCTGATGCAATGAGAAG 1563 ||| |||||| |||| ||||| |||||||||||||| |||||||||||||||||||||| Sbjct 1497 CTTCTTCTTCGTTGGCCGAGTCGAGTTTTTCTATGACCAATCTCCTGATGCAATGAGAAG 1556 Query 1564 TGTATGCAGCGCTTTGGCACTACTCAATACCGCAGTCGGAAGCTACCTGAGCTCGTTGAT 1623 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1557 TGTCTGCAGCGCTTTGGCACTACTCAATACCGCAGTCGGAAGCTACCTGAGCTCGTTGAT 1616 Query 1624 CCTCACTCTTGTGGCGTATTTCAC-AGCTCTTGGAGGTAAAGATGGTTGGGTTCCAGACG 1682 ||||||||||||||||||||| || | | |||||||||||||||||||| ||||||||| Sbjct 1617 CCTCACTCTTGTGGCGTATTTGACGA-CAATTGGAGGTAAAGATGGTTGGATTCCAGACG 1675 Query 1683 ACCTTAATAAAGGACATCTTGACTACTTCTTCTGGCTTTTGGTCTCTCTTGGACTTGTCA 1742 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1676 ACCTTAATAAAGGACATCTTGACTACTTCTTCTGGCTTTTGGTCTCTCTTGGACTTATCA 1735 Query 1743 ACATTCCTGTTTATGCCTTGATT-TGTGTTAAGCACACAAAGAAGAAGGCTTTGTAAGCT 1801 |||||||||| |||||||| || | |||||||||||| |||||||||||||| |||||| Sbjct 1736 ACATTCCTGTCTATGCCTTC-TTCTCTGTTAAGCACACGAAGAAGAAGGCTTTATAAGCT 1794 Query 1802 ATTTTTGTAACAAGCTATGTTGTTTTGGTTCATCATATTCATGGT 1846 | ||||||||||||||||| |||||||||||||||| |||| ||| Sbjct 1795 ACTTTTGTAACAAGCTATGCTGTTTTGGTTCATCATGTTCAGGGT 1839 > Ahg484127 jgi|Araly1|484127|fgenesh2_kg.5__119__AT2G02040.1 Length=1977 Score = 704 bits (381), Expect = 0.0 Identities = 1010/1308 (77%), Gaps = 65/1308 (5%) Strand=Plus/Plus Query 131 GCTGAAGATGGTTCTA-TTGACATTT-ATGGAAACCCACCATCGAAGAAGAAGACAGGAA 188 |||||||||||||| | | ||| ||| ||||||||||||||| |||| |||| ||||||| Sbjct 191 GCTGAAGATGGTTC-AGTGGAC-TTTAATGGAAACCCACCATTGAAGGAGAAAACAGGAA 248 Query 189 ACTGGAAAGCTTGTCCCTTTATTCTTGGAAACGAATGTTGTGAGAGATTAGCTTACTATG 248 |||||||||||||||| ||||||||||| || |||||||||||||| |||||||||||| Sbjct 249 ACTGGAAAGCTTGTCCTTTTATTCTTGGTAATGAATGTTGTGAGAGGCTAGCTTACTATG 308 Query 249 GAATTGCCAAGAATCTAATCACTTA-CTACACAAGTGAA-TTACA-CGAGTCCAATGTTT 305 | ||||| |||||| |||||||| || ||| | | || |||| | || ||||| | Sbjct 309 GTATTGCTGGGAATCTTATCACTTACCT-CACCACT-AAGCTACATCAAG-GAAATGTGT 365 Query 306 CTGCAGCTAGTGACGTTA-TGATTTGGCAAGGAACTTGCTATATCACACCTCTCATTGGA 364 |||| |||| | |||| | | |||||||| ||||| ||| | || ||||| |||||| Sbjct 366 CTGCTGCTACAAATGTTACT-ACATGGCAAGGGACTTGTTATCTTACTCCTCTTATTGGA 424 Query 365 GCTGTTATAGCTGATTCTTACTGGGGAAGATACTGGACCATTGCTTCTTTCTCTGCTATT 424 |||||| | || ||| ||||||||||| |||||||||| ||||||| |||||| | ||| Sbjct 425 GCTGTTTTGGCCGATGCTTACTGGGGACGATACTGGACTATTGCTTGTTTCTCCGGGATT 484 Query 425 TATTTCATTGGAATGGCTTTGTTGACACTCTCGGCTTCACTTCCGGTTTTAAAGCCAGCG 484 |||||||| || ||| | ||| || || || || ||| |||||| || ||||||||| Sbjct 485 TATTTCATCGGGATGTCGGCGTTAACTCTTTCAGCCTCAGTTCCGGCATTGAAGCCAGCG 544 Query 485 GCATGTGCTGGCGTTGCTGCGGCTCTATGCT-CACCAGCAACAACGGTTCAGTATGCGGT 543 | | || | ||| |||| | | || | || ||||||| | | ||| |||||| | Sbjct 545 G-A-ATG-T---ATTG--GCGG-TTTTTG-TCCATCAGCAACGCCAGCTCAATATGCGAT 594 Query 544 TTTCTTT-ACAGGGCTTTACCTTATTGCTCTTGGTACTGGAGGTATCAAACCATGTGTAT 602 |||||| | ||||||||||| || || ||||| |||||||||||||||||||| || | Sbjct 595 GTTCTTTGGC-GGGCTTTACCTGATCGCCCTTGGCACTGGAGGTATCAAACCATGCGTCT 653 Query 603 CATCTTTTGGTGCTGATCAGTTTGATGATACTGACCCGAGGGAACGAGTTAGAAAAGCTT 662 |||| |||||||| |||||||||||||| || ||| || | ||||||||||||||||||| Sbjct 654 CATCCTTTGGTGCAGATCAGTTTGATGACACGGACTCGCGTGAACGAGTTAGAAAAGCTT 713 Query 663 CTTTCTTTAACTGGTTTTACTTCTCCATCAACATTGGTTCATTTATCTCATCCACT-TTG 721 | ||||||||||||||||||||||||||||| ||||| || || | ||||| | | || Sbjct 714 CGTTCTTTAACTGGTTTTACTTCTCCATCAATATTGGAGCACTTGTGTCATCTAGTCTTC 773 Query 722 TTAGTTTGGGTTCAAGAAAAT-GTCGGGTGGGGACTCGGTTTCTTG-ATTCCCACCGTGT 779 | ||||||| ||||||| ||| | ||||||||| | || || | | || || ||||||| Sbjct 774 T-AGTTTGGATTCAAGAGAATCG-CGGGTGGGGTTTAGGATT-TGGGATACCAACCGTGT 830 Query 780 TTATGGGAGTCT-CTATTGCGAGTTTCTTCATTGGAACTCCGCTTTATC-GGTTTCAGAA 837 | |||||| | | | ||||| ||||||||| |||| || |||||||| | |||||||||| Sbjct 831 TCATGGGACT-TGCCATTGCAAGTTTCTTCTTTGGCACACCGCTTTA-CAGGTTTCAGAA 888 Query 838 ACCGGGAGGTAGTCCGATTACTAG-AGTTTGCCAAGTTCTTG-TAGCTGCATACCGTAAA 895 ||| ||||| || ||||| ||| | | ||| |||||| | || | ||| ||| ||| ||| Sbjct 889 ACCTGGAGGAAGCCCGATAACTCGGA-TTTCCCAAGT-CGTGGTTGCTTCATTCCGGAAA 946 Query 896 TTGAAGCT-T-AATCTCCCTGAAGATATCTCATTTCTGTATGAAACACGAGAGAAAAACT 953 | | || | || ||||||||||| | | ||||||||||||||| ||| || |||| Sbjct 947 TC-AT-CTGTCAAACTCCCTGAAGACCCCACGCTTCTGTATGAAACACAAGACAAGAACT 1004 Query 954 C--CATGATTGCTGGAAGCAGGAAGATTCAAC-ACACTGACGGTTACAAGTTTCTTGACA 1010 | | | ||||||||||| || || || | | | || || | || ||||| |||||||| Sbjct 1005 CTGC-T-ATTGCTGGAAGTAGAAAAAT-CGAGTATACCGATGATTGCAAGTATCTTGACA 1061 Query 1011 AAGCTGCTGTTATCTCAGAATATGAATCTAAATCCGGTGCTTTTTCCAACCCATGGA-AG 1069 |||| ||||||||||||||| | ||||| |||||||| | || ||||||| | |||| | Sbjct 1062 AAGCCGCTGTTATCTCAGAAGAAGAATCGAAATCCGGAGATTATTCCAACTCGTGGAGA- 1120 Query 1070 CTATGTACTGTAACTCAAGTCGAAGAAGTTAAGACTCTAATCCGTATGTTTCCAATCTGG 1129 ||||| || || || |||||||||||| | |||| ||| || || ||||| ||||||||| Sbjct 1121 CTATGCACGGTTACGCAAGTCGAAGAACTCAAGATTCTGATTCGAATGTTCCCAATCTGG 1180 Query 1130 GCCTCGGGGATCGTCTACTCGG-TCCTATATTCACAGATTTCCACTCTATTCGTGCAACA 1188 || || || || | | ||| | | |||| |||| || ||||| | || || ||||| Sbjct 1181 GCTTCCGGTATAATTTTCTCAGCTG-TATACGCACAAATGTCCACAATGTTTGTTCAACA 1239 Query 1189 AGGACG-GTCCATGAACCG-AATAATCCGTTCTTTCGAGATCCCTCCTGCTTCATTCGGG 1246 ||| || | |||||||| | || |||| | || ||| || | ||||| || || | ||| Sbjct 1240 AGGCCGAG-CCATGAACTGCAA-AATCGGATCGTTCCAGCTTCCTCCAGCAGCACTAGGG 1297 Query 1247 GTTTTCGACACA-CTTATCGTGC-TCATATCCATCCCAATATATGACCGTTTCCTCGTAC 1304 |||||||| || | ||| | |||| | |||| | || ||||| ||| || | | Sbjct 1298 ACATTCGACACTGCT-AGCGT-CATCATCTGGGTCCCGCTCTACGACCGGTTCATCATTC 1355 Query 1305 CCTTTGTAAGACGGTTCACAGG-G-ATACCAAAAGGGTTAACTGATCTGCAGCGAATGGG 1362 |||| | ||||||||||||||| | | || ||| || || || || | || ||||||| Sbjct 1356 CCTTAGCAAGACGGTTCACAGGAGTAGAC-AAA-GGATTCACGGAGATACAAAGAATGGG 1413 Query 1363 CATTGGTCTTTTTCTCTCTGTCCTAAGCATTGCAGCTGCAGCTATTGT 1410 || ||||||||| ||||||| || | || ||||||||||| ||||| Sbjct 1414 AATCGGTCTTTTTGTCTCTGTTCTCTGTATGGCAGCTGCAGCCATTGT 1461 > Ahg935936 jgi|Araly1|935936|scaffold_500127.1 Length=1778 Score = 361 bits (195), Expect = 1e-98 Identities = 588/769 (76%), Gaps = 61/769 (8%) Strand=Plus/Plus Query 1064 TGGAAGCTATGTACTGTAACTCAAGTCGAAGAAGTTAAGACTCTAATCCGTATGTTTCCA 1123 |||||||| ||||| || |||||||||||||||||||||| ||| | ||| |||| || Sbjct 913 TGGAAGCTCTGTACCGTGACTCAAGTCGAAGAAGTTAAGATTCTGTTACGTTTGTTCCCC 972 Query 1124 ATCTGGGCCTCGGGGATCGTCTACTCGGTCCTATATTCACAGATTTCCACTCTATTCGTG 1183 || ||||||||||| ||| ||| ||| || || | |||||||||| ||| || || || Sbjct 973 ATTTGGGCCTCGGGCATCATCTTCTCAGTTCTCCACTCACAGATTTACACGCTCTTTGTT 1032 Query 1184 CAACAAGGACGGTCCATGAACCGAATAATCCGTTCTTTCGAGATCCCTCCTGCTTCAT-T 1242 |||||||||||||||||||| |||| ||| | || ||||| |||||||| ||| | | | Sbjct 1033 CAACAAGGACGGTCCATGAAACGAACCATCGGCTCATTCGAAATCCCTCCAGCTAC-TCT 1091 Query 1243 CGGGGTTTTCGACAC-ACTTA-TCGTGCTCATATCCATCCCAATATATGACCGTTTCCTC 1300 |||| | |||||||| | | | || |||||||| ||||||| |||||||| || || Sbjct 1092 CGGGATGTTCGACACTGC-AAGT-GTTCTCATATCTGTCCCAATCTATGACCGCATCATC 1149 Query 1301 GTACCCTTTGTAAGACGGTTCACAGGGATACCAAAAGGGTTAACTGATCTGCAGCGAATG 1360 || |||||||| |||||||||||||| || | ||||| || |||||||| || |||||| Sbjct 1150 GTTCCCTTTGTGAGACGGTTCACAGGCTTAGCGAAAGGATTCACTGATCTACAACGAATG 1209 Query 1361 GGCATTGGTCTTTTTCTCTCTGTCCTAAGCATTG-CAGCTGCAGCTATTGTTGAGACAGT 1419 || ||||| || ||| ||||||| | ||| ||| || ||||||||| |||||||| || Sbjct 1210 GGGATTGGACTCTTTGTCTCTGTTTTGAGC-TTGACATTTGCAGCTATCGTTGAGACGGT 1268 Query 1420 GCGGTTGCAGCTT-GCTCAAGA-C-T--T-T-GTTGCAA-T---G--A--G---CA-T-- 1458 ||||| ||| || || | ||| | | | | || | || | | | | || | Sbjct 1269 TCGGTTACAG-TTAGCCCGAGATCTTGATCTAGTGGAAAGTGGAGACACTGTTCCATTAA 1327 Query 1459 --A--TTTTGGCAGATCCCTCAGTACATACTAATGGG-AATAGC-AGAGGTCTTT-TTCT 1511 | |||||||| |||||||||||| | | ||||| | | || || || ||| |||| Sbjct 1328 CCATCTTTTGGCAAATCCCTCAGTACTTTTTTATGGGCACT-GCTGGA-GT-TTTCTTCT 1384 Query 1512 TCATTGGTC-GAGTTGAGTTTTTCTATGATG-AATCTCCTGATGCAATGAGAAG-TGTAT 1568 || |||||| || | |||||||||||||| | | ||||| ||| |||||||||| | | | Sbjct 1385 TCGTTGGTCGGA-TCGAGTTTTTCTATGA-GCAGTCTCCAGATTCAATGAGAAGCT-TGT 1441 Query 1569 GCAGCGCTTTGGCACTACTCAATACCGCAGTCGGAAGCTACCTGAGCTCGTTGATCCTCA 1628 | || |||| ||| || |||| |||| || | |||| |||| |||||||||||||| | | Sbjct 1442 GTAGTGCTTGGGCTCTTCTCACTACCACACTAGGAAACTACTTGAGCTCGTTGATCATTA 1501 Query 1629 CTCTTGTGGCGTATTTCACAGCTCTTGGAGGTAAAGATGGTTGGGT--TCCAGACGACCT 1686 | |||||||||||||| || | ||||||||| ||||| | | ||||| || | Sbjct 1502 CCCTTGTGGCGTATTT--GAG--C-----GGTAAAGATTGTTGGATCCTTCAGACAACAT 1552 Query 1687 TAATAAAGGACATCTTGACTACTTCTTCTGGCTTTTGGTCTCTCTTGGACT-TGTCAACA 1745 ||| || |||||||||||||||||||||||||||||||||| ||||||| | ||| |||| Sbjct 1553 TAACAATGGACATCTTGACTACTTCTTCTGGCTTTTGGTCTGTCTTGGA-TGTGTTAACA 1611 Query 1746 TTCCTGTTTATGCCTTGATT-TGTGTTAAGCACACAAAGAAGAAGGCTT 1793 | || |||| || ||| || | ||| || |||| | |||||||||| Sbjct 1612 TACCCGTTTTTGTCTTC-TTCTCTGTCAAATACACTCACAAGAAGGCTT 1659 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 71723931335 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5