BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G62660.1
Length=2428
Score E
Sequences producing significant alignments: (Bits) Value
Ahg907175 jgi|Araly1|907175|Al_scaffold_0002_256 2870 0.0
Ahg920058 jgi|Araly1|920058|scaffold_101339.1 1406 0.0
> Ahg907175 jgi|Araly1|907175|Al_scaffold_0002_256
Length=1965
Score = 2870 bits (1554), Expect = 0.0
Identities = 1836/1970 (93%), Gaps = 28/1970 (1%)
Strand=Plus/Plus
Query 232 ATGGCGAGC-ACGGAAGCTCTCTTACCCGTCACGTCCCTACAAGATCCATTATCTGAGTC 290
||||||||| || ||||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct 1 ATGGCGAGCAAC-GAAGCTCTCTTACCCGTCACGTCCCGACAAGATCCATTATCCGAGTC 59
Query 291 AAGATCCGACCAGATCCCGGAGACCCGTCGGAGACGACCCATCAAAGTTCATCTTG-CAG 349
|||||||||||||||||||||||||||||||||| ||||||||||||| ||||| | ||
Sbjct 60 AAGATCCGACCAGATCCCGGAGACCCGTCGGAGAAGACCCATCAAAGTCCATCTCGCCA- 118
Query 350 TCTATTCCGGTTTGCTCTTGATCGCTTTGTACGTCACTCTCATCGTCACACACGACGG-- 407
|||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||
Sbjct 119 TCTATTCCGGTTTGCTCTTGATTGCTTTGTACGTTGCTCTCATCGTCACACACGATGGAT 178
Query 408 ----CTC-C-A-A-GGCTG--AA--AT---A-G-CGACGGAGTCACGTCCTCGTATGGCC 450
||| | | | ||| | || || | | |||| ||||||||| ||||| |||||
Sbjct 179 CCACCTCTCAACATGGC-GCCAAGGATGAAACGTCGACAGAGTCACGTGCTCGTTTGGCC 237
Query 451 GGCGTGTCGGAGAAGAGCAACGACGGGGTTTGGATATCATCCGATGATGGGAAAGTTGAA 510
|||||||||||||||||||||||| | |||| || || ||| |||||| |||||||||||
Sbjct 238 GGCGTGTCGGAGAAGAGCAACGACCGAGTTTCGAGATTATCAGATGATCGGAAAGTTGAA 297
Query 511 GCGTTCCCGTGGAACAATACTATTTTGTCGTGGCAACGCACGGCGTTTCATTTCCAGCCT 570
|||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 298 GCGTTCGCGTGGAACAATACTATGTTGTCGTGGCAACGCACGGCGTTTCATTTCCAGCCT 357
Query 571 GAGAAAAATTGGATGAACGATCCTAATGGTCCATTGTTCTATAAGGGATGGTACCATTTC 630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 358 GAGAAAAATTGGATGAACGATCCTAATGGTCCATTGTTCTATAAGGGATGGTACCATTTC 417
Query 631 TTCTATCAATACAACCCAAATGCAGCTGTGTGGGGTGACATTGTTTGGGGTCACGCCGTG 690
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 418 TTCTATCAATACAACCCAAATGCAGCTGTGTGGGGTGACATTGTTTGGGGCCACGCCGTG 477
Query 691 TCAAAAGACCTTATCCACTGGCTTTATCTCCCAATAGCCATGGTTCCTGACCAATGGTAC 750
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 478 TCAAAGGACCTTATCCACTGGCTTTATCTCCCAATAGCCATGGTTCCTGACCAATGGTAC 537
Query 751 GATGCAAACGGTGTCTGGACCGGTTCAGCCACTTTTCTAGATGATGGCTCCATTGTCATG 810
|| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 538 GACGCTAACGGCGTCTGGACCGGTTCAGCCACTTTTCTAGATGATGGCTCCATTGTCATG 597
Query 811 CTCTACACCGGTTCCACTGACGAATTCGTACAGGTTCAAAACCTTGCCTATCCTGAAGAC 870
|||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||
Sbjct 598 CTCTACACCGGTTCCACTGATAAATTCGTACAGGTTCAAAACCTTGCATATCCTGAGGAC 657
Query 871 CCAAGCGACCCACTTTTGTTGAAATGGGTCAAGTTCTCCGGTAACCCTGTCCTCGTACCG 930
|||||||||||||||||||||||||||| |||||||||||| ||||| || ||||||||
Sbjct 658 CCAAGCGACCCACTTTTGTTGAAATGGGCCAAGTTCTCCGGCAACCCGGTTCTCGTACCT 717
Query 931 CCTCCAGGTATTGGTGCAAAGGACTTCCGTGACCCAACAACAGCCTGGAAGACATCTTCT 990
|| ||||||||||||||||||||||||||||||||||| || |||||||| ||||| |
Sbjct 718 CCACCAGGTATTGGTGCAAAGGACTTCCGTGACCCAACGACGGCCTGGAAAACATCGACC 777
Query 991 GGAAAATGGCGAATCACCATCGGTTCCAAAATCAATAGAACCGGAATATCTCTCATTTAT 1050
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 778 GGAAAATGGCGAATCACCATCGGCTCCAAAATCAATAGAACCGGAATATCTCTCATTTAT 837
Query 1051 GACACTACCGATTTCAAAACCTACGAGAAACACGAAACCTTGTTGCACCAAGTCCCCAAC 1110
|||||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||
Sbjct 838 GACACTACCGATTTCAAAACTTACGAGAAACACGATACCTTGTTGCACCAAGTCCCTAAC 897
Query 1111 ACCGGAATGTGGGAGTGCGTTGATTTTTACCCGGTGTCGAAGACTCA-GCTCAATGGGCT 1169
|||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||
Sbjct 898 ACCGGAATGTGGGAGTGCGTTGATTTTTACCCTGTGTCGAAGACTCAAG-TCAATGGGCT 956
Query 1170 CGATACTTCGGTCAACGGACCAGATGTCAAGCATGTCATCAAGGCTAGCATGGACGATAC 1229
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 957 CGATACTTCGGTCAACGGGCCAGATGTCAAGCATGTCATCAAGGCTAGCATGGACGATAC 1016
Query 1230 TAGAATTGACCATTATGCCATTGGGACGTACGATGATTCAAACGCTACATGGGTCCCCGA 1289
||||||||||||||| |||||||||||||| |||||||||||| |||||||||||| ||
Sbjct 1017 TAGAATTGACCATTACGCCATTGGGACGTATTATGATTCAAACGGTACATGGGTCCCGGA 1076
Query 1290 TAATCCTTCTATCGATGTCGGAATCAGTACCGGTTTGAGATACGATTACGGGAAATATTA 1349
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct 1077 TAATCCTTCTATCGATGTCGGAATCAGTACCGCTTTGAGATACGATTACGGGAAATTTTA 1136
Query 1350 TGCGTCAAAGACGTTTTACGATCAAAATAAGGGACGAAGAATCTTATGGGGTTGGATCGG 1409
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct 1137 TGCGTCAAAGACGTTTTACGATCAAAATAAGGGACGGAGAATCTTATGGGGTTGGATTGG 1196
Query 1410 TGAATCTGACAGTGAAGCTGCTGATGTACAAAAGGGTTGGTCTTCTGTTCAGGGCATCCC 1469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1197 TGAATCTGACAGTGAAGCTGCTGATGTACAAAAGGGTTGGTCTTCTGTTCAGGGCATCCC 1256
Query 1470 AAGAACTGTTGTATTGGACACAAGGACGCATAAAAACTTAGTCCAGTGGCCAGTTGAGGA 1529
|||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1257 AAGAACTGTTGTCTTGGACACAAGGACGCGGAAAAACTTAGTCCAGTGGCCAGTTGAGGA 1316
Query 1530 AATCAAATCATTGAGACTAAGCAGCAAGAAATTTGACATGACTATTGGACCAGGGACTGT 1589
||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||
Sbjct 1317 AATCAAATCATTGAGACTAAGCAGCAACAAATTTGACATGACGATTGGACCAGGGACAGT 1376
Query 1590 GGTTCCGGTCGATGTGGGTTCCGCCACTCAGCTAGACATAGAGGCTGAGTTCGAGATCAA 1649
||||||||| ||||||| ||| || |||||||||||||||||||| ||||||||||||||
Sbjct 1377 GGTTCCGGTAGATGTGGATTCTGCGACTCAGCTAGACATAGAGGCCGAGTTCGAGATCAA 1436
Query 1650 GACCGATGATCTCAAGTTATTCTTTGATGATGACTCTGTGGAGGCCGACAATAAATTCAG 1709
||| || |||||||| ||||||||||||||||||| || || | |||||| ||||||||
Sbjct 1437 GACGGAGGATCTCAAACTATTCTTTGATGATGACTCCGTAGATGTCGACAAAAAATTCAG 1496
Query 1710 CTGCGAAACAAACGGAGGCTCCACAGCG-CGTGGTGCTTTAGGGCCTTTTGGATTCTCGG 1768
||||||||| | |||||||||||| | | ||||||||||||||||||||||||||||| |
Sbjct 1497 CTGCGAAACCAGCGGAGGCTCCACGG-GACGTGGTGCTTTAGGGCCTTTTGGATTCTCCG 1555
Query 1769 TTCTCGCTGACGAGGGCTTGTCAGAACAAACTCCGGTTTACTTCTATGTGACTAAGGGAA 1828
|||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1556 TTCTTGCTGACGAAAGCTTGTCAGAACAAACTCCGGTTTACTTCTATGTGACTAAGGGAA 1615
Query 1829 AACATTCAAAACTCAATACTGTCTTCTGCACTGACACCTCAAGGTCGACTTTGGCAAACG 1888
|||||||||||||||| |||||||||||||||||||||||||| |||||| |||||||||
Sbjct 1616 AACATTCAAAACTCAAAACTGTCTTCTGCACTGACACCTCAAGATCGACTATGGCAAACG 1675
Query 1889 ATGTGGTGAAACCAATCTATGGAAGCTTCGTACCGGTCTTAAAAGGAGAGAAATTGACAA 1948
||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct 1676 ATGTGGTGAAACCGATCTATGGAAGCTTCGTACCGGTCCTAAAAGGAGAGAAATTAACAA 1735
Query 1949 TGAGAATCTTGGTTGATCATTCGATCGTAGAAGGATTCGCACAAGGTGGAAGATCATGTA 2008
||||||||||||| ||||||||||| |||||||||||||||||||| |||||| ||||||
Sbjct 1736 TGAGAATCTTGGTGGATCATTCGATAGTAGAAGGATTCGCACAAGGAGGAAGAACATGTA 1795
Query 2009 TTACCTCAAGAGTATATCCCACAAAAGCTATCTATGGAGCTACCAAGCTCTTCTTGTTCA 2068
|||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||
Sbjct 1796 TTACCTCAAGAGTATATCCCACAAAAGCAATCTATGGAGCTACAAAACTCTTCTTGTTCA 1855
Query 2069 ATAACGCCATTGATGCGACCGTTACGGCGTCGTTTACGGTCTGGCAAATGAACAATGCTT 2128
| |||||||||||||||||||| ||||||||||||| ||| ||||||||||||| |||||
Sbjct 1856 ACAACGCCATTGATGCGACCGTAACGGCGTCGTTTAGGGTTTGGCAAATGAACAGTGCTT 1915
Query 2129 TTATTCATCCTTACTCTTCAGACGATCTCGGTGTTCCTTCCAGCACCTGA 2178
||||||||||||||||| ||||||||||| ||||||||||| | ||||||
Sbjct 1916 TTATTCATCCTTACTCTCCAGACGATCTCAGTGTTCCTTCCCGTACCTGA 1965
> Ahg920058 jgi|Araly1|920058|scaffold_101339.1
Length=2032
Score = 1406 bits (761), Expect = 0.0
Identities = 1425/1742 (82%), Gaps = 59/1742 (3%)
Strand=Plus/Plus
Query 432 GTCACGTCCTCGTATGGCCGGCGTGTCGGAGAAGAGCAACGACGGGGTT-TGGATATC-A 489
||||||| | ||| | || || ||||||||||| || || | | ||||| |||| | |
Sbjct 263 GTCACGTGCACGTCTTGCTGGTGTGTCGGAGAAAAGTAATG-CTGGGTTATGGA-AACTT 320
Query 490 TCCGATGATGGGAA-A-GTTGAAGCGTTCCCGTGGAACAATACTATTTTGTCGTGGCAAC 547
|||| |||| |||| | | | ||||| |||||||||| ||| |||||||||||||
Sbjct 321 TCCGGTGATCGGAACACGCCG--GCGTTTGAATGGAACAATAGTATATTGTCGTGGCAAC 378
Query 548 GCACGGCGTTTCATTTCCAGCCTGAGAAAAATTGGATGAACGATCCTAATGGTCCATTGT 607
| |||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||
Sbjct 379 GAACGGCGTTTCATTTCCAGCCCGAGCAGAATTGGATGAACGATCCTAATGGTCCATTGT 438
Query 608 TCTATAAGGGATGGTACCATTTCTTCTATCAATACAACCCAAATGCAGCTGTGTGGGGTG 667
|||| || |||||||||||||||||||| ||||| |||||||| ||||| || |||||||
Sbjct 439 TCTACAAAGGATGGTACCATTTCTTCTACCAATATAACCCAAACGCAGCCGTATGGGGTG 498
Query 668 ACATTGTTTGGGGTCACGCCGTGTCAAAAGACCTTATCCACTGGCTTTATCT-CCCAATA 726
||||||||||||||||||||||||| | ||||| ||||| ||| | || | |||| ||
Sbjct 499 ACATTGTTTGGGGTCACGCCGTGTCTAGGGACCTAATCCATTGGGTCCATTTGCCCA-TA 557
Query 727 GCCATGGTTC-CTGACCAATGGTACGA-TGCAAACGGTGTCTGGACCGGTTCAGCCACTT 784
|||||||| | |||| ||||||||||| | ||| ||||| |||||||| ||||||||
Sbjct 558 GCCATGGT-CGCTGATCAATGGTACGACTCCAAT-GGTGTGTGGACCGGCTCAGCCACAA 615
Query 785 TTCTAGATGATGGCTCCATTGTCATGCTCTACACCGGTTCCACTGACGAATTCGTACAGG 844
| || ||||||||| || ||||||||||| ||||||||||| ||| || ||| ||||
Sbjct 616 TACTCCCTGATGGCTCTATAGTCATGCTCTATACCGGTTCCACCGACAAAGCCGTGCAGG 675
Query 845 TTCAAAACCTTGCCTATCCTGAAGACCCAAGCGACCCACTTTTGTTGAAATGGGTCAAGT 904
| |||||||||||||| ||||| ||||| |||||||||||| |||| |||||||||||||
Sbjct 676 TCCAAAACCTTGCCTACCCTGAGGACCCCAGCGACCCACTTCTGTTAAAATGGGTCAAGT 735
Query 905 TCTCCGGTAAC-CCTGTCCTCGTACCGCCTCCAGGTATTGGTGCA-AAGGACTTCCGTGA 962
|| |||| || || || || ||||| || || |||||| | | ||||||||||||||
Sbjct 736 TC-CCGGGAAATCCGGTTCTGGTACCTCCGCCCGGTATTC-TCCCTAAGGACTTCCGTGA 793
Query 963 CCCAACAACAGCCTGGAAGACATCTTCTGGAAAATGGCGAATCACCATCGGTTCCAAAAT 1022
||||| || || ||||||||||| ||||||||||| ||||| || || ||||| |
Sbjct 794 TCCAACGACTGCGTGGAAGACATCAGAAGGAAAATGGCGGATCACGATTGGCTCCAAGCT 853
Query 1023 CAATAGAACCGGAATATCTCTCATTTATGACACTACCGA-TTTCAAAACCTACGAGAAAC 1081
||| ||||| ||||| || ||| | || ||||| ||||| ||| ||||| ||||||||||
Sbjct 854 CAACAGAACTGGAATCTCACTCGTGTACGACACCACCGACTTT-AAAACATACGAGAAAC 912
Query 1082 ACGAAACCTTGTTGCACCAAGTCCCCAACACCGGAATGTGGGAGTGCGTTGATTTTTACC 1141
|| || |||||||||| ||| || |||||||||||||||||||| ||||| |||||||
Sbjct 913 TGGACACTTTGTTGCACCGAGTTCCTAACACCGGAATGTGGGAGTGTGTTGACTTTTACC 972
Query 1142 CGGTGTCGAAGACT-CAGCTCAATGGGCTCGATACTTCGGTCAACGGACCAGATGTCAAG 1200
||||||| ||||| | | ||||||||||||| || |||||||| ||||| ||||| |||
Sbjct 973 CGGTGTCTAAGACCGCGG-TCAATGGGCTCGACACATCGGTCAAAGGACCGGATGTGAAG 1031
Query 1201 CATGTCATCAAGGCTAGCATGGACGATACTAGAATT-GACCATTATGCCATTGGGACGTA 1259
||| || | ||||||||||||||||| || || || ||||||||||| | || |||||
Sbjct 1032 CATATCGTGAAGGCTAGCATGGACGACACCAGG-TTCGACCATTATGCTGTAGGCACGTA 1090
Query 1260 CGATGATTCAAACGCTACATGGGTCCCCGATAATCCTTCTATCGATGTCGGAATCAGTAC 1319
||||||||||| |||||| |||| ||| ||||| ||||||||||||| || |||||
Sbjct 1091 TTTTGATTCAAACGGAACATGGATCCCGGATGATCCTACTATCGATGTCGGGATGAGTAC 1150
Query 1320 CGGTTTGAGATACGATTACGGGAAATAT-TATGCGTCAAAGACGTTTTACGATCAAAATA 1378
| |||| ||||| ||||||||||| | | ||||| ||||| ||||||||||| || || |
Sbjct 1151 CAGTTTAAGATATGATTACGGGAAGT-TCTATGCTTCAAAAACGTTTTACGACCAGAACA 1209
Query 1379 AGGGACGAAGAATCTTATGGGGTTGGATCGGTGAATCTGACAGTGAAGCTGCTGATGTAC 1438
|||| |||||| |||| ||| ||||||| ||||||||||||||||| |||||||||||||
Sbjct 1210 AGGGTCGAAGAGTCTTGTGGAGTTGGATTGGTGAATCTGACAGTGAGGCTGCTGATGTAC 1269
Query 1439 AAAAGGGTTGGTCTTCTGTTCAGGGCATCCCAAGAACTGTTGTATTGGACACAAGGAC-G 1497
||||||||||||| ||||||||||| ||||||||||| ||||| | ||||||| ||| |
Sbjct 1270 AAAAGGGTTGGTCGTCTGTTCAGGGTATCCCAAGAACCGTTGTCCTCGACACAAAGACAG 1329
Query 1498 CATAAAAACTTAGTCCAGTGGCCAGTTGAGGAAATCAAATCA-TTGAGACTAAGCAGCAA 1556
| || ||||| || || |||||||| || ||||||||||| || ||||||||||||||
Sbjct 1330 GA-AATAACTTGGTTCAATGGCCAGTAGAAGAAATCAAATCTCTT-AGACTAAGCAGCAA 1387
Query 1557 GAAATTTGACATGACTATTGGACCAGGGACTGTGGTTCCGGTCGATGTGGGTTCCGCCAC 1616
| | ||||| || | | | || ||| | ||||| || || ||||| |||||||| |
Sbjct 1388 GCAGTTTGATATCAAGGTCAGTCCTGGGTCAGTGGTACCCGTAGATGTAGGTTCCGCGGC 1447
Query 1617 TCAGCTAGACATAGAGGCTGAGTTCGAGATCAAGACCGATGATCTCAAGTTA---TTCTT 1673
|||||||||||| || || || |||||||| || | || ||||| || | ||||
Sbjct 1448 TCAGCTAGACATCGAAGCAGAATTCGAGATTAATAAAGA--ATCTCTAGACAAAATTCTC 1505
Query 1674 TGATGATGACT-CTGTGGAGGCCG-A-CA-ATAAATTCAGCTGCGAAACAAA-CGGAGGC 1728
|| | | || | || | ||| | | | | |||| |||||||| | ||| |||||||
Sbjct 1506 GGAA-ACG-CTTCGGTAGTGGCTGTAGCCGAGGAATTTAGCTGCGAGA-AAAGCGGAGGC 1562
Query 1729 TCCACAG-CGCGTGGTGCTTTAGGGCCTTTTGGATTCTCGGTTCTCGCTGAC-GAGGGCT 1786
||||| | | ||||||||||||||||| ||||||||||||||||||||| || || |||
Sbjct 1563 TCCACCGTC-CGTGGTGCTTTAGGGCCATTTGGATTCTCGGTTCTCGCT-ACTGAAAGCT 1620
Query 1787 TGTCAGAACAAACTCCGGTTTACTTCTATGT-GACTAAGGGAAAACATTCAAAACTCAAT 1845
||||||| ||||| ||||||||||||||||| | |||| |||||| ||||| | |||||
Sbjct 1621 TGTCAGAGCAAACACCGGTTTACTTCTATGTAG-CTAAAGGAAAAGATTCAGAGCTCAAA 1679
Query 1846 ACTGTCTTCTGCACTGACACCTCAAGGTCGA-CTTTGGCAAACGATGTGGTGAAACCAAT 1904
||| |||||||||| |||||||||||||| | || | || |||||||| || ||||| ||
Sbjct 1680 ACTTTCTTCTGCACAGACACCTCAAGGTC-ATCTGTAGCTAACGATGTCGTTAAACCGAT 1738
Query 1905 CTATGGAAGCTTCGTACCGGT-CTTAAAAGGAGAGAAATTGACAATGAGAATCTTGGTTG 1963
|| || ||| |||||||||| || |||||| |||||| |||| |||||||| ||||| |
Sbjct 1739 ATACGGTAGCGTCGTACCGGTTCT-AAAAGGGGAGAAACTGACCATGAGAATTTTGGTGG 1797
Query 1964 ATCATTCGATCGTAGAAGGATTCGCACAAGGTGGAAGATCATGTATTACCTCAAGAGTAT 2023
|||||||||| ||||||| ||| | ||||||||||||| ||||||| || |||||||| |
Sbjct 1798 ATCATTCGATAGTAGAAGCATTTGGACAAGGTGGAAGAACATGTATAACATCAAGAGTTT 1857
Query 2024 ATCCCACAAAAGCTATCTATGGAGCTA-CCAAGCTCTTCTTGTTCAATAACGC-CATTGA 2081
|||| |||| || ||||||||||| | ||||||| |||||||||||||| || | ||||
Sbjct 1858 ATCCGACAAGTGCAATCTATGGAGC-AGCCAAGCTTTTCTTGTTCAATAATGCTC-TTGA 1915
Query 2082 TGCGACCGTTACGGCGTCGTTTACG-GTCTGGCAAATGAACAATGCTTTTATTCATCCTT 2140
||| || |||||||||||||||| | || ||||||||||||| |||||||||||||||||
Sbjct 1916 TGCTACTGTTACGGCGTCGTTTA-GAGTTTGGCAAATGAACAGTGCTTTTATTCATCCTT 1974
Query 2141 AC 2142
||
Sbjct 1975 AC 1976
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 91492768490
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5