BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G63250.1 Length=2612 Score E Sequences producing significant alignments: (Bits) Value Ahg924637 jgi|Araly1|924637|scaffold_200198.1 3659 0.0 Ahg315081 jgi|Araly1|315081|fgenesh1_pm.C_scaffold_2000114 2846 0.0 Ahg487703 jgi|Araly1|487703|fgenesh2_kg.6__837__AT5G08610.1 65.8 2e-09 > Ahg924637 jgi|Araly1|924637|scaffold_200198.1 Length=2467 Score = 3659 bits (1981), Expect = 0.0 Identities = 2297/2446 (94%), Gaps = 36/2446 (1%) Strand=Plus/Plus Query 1 ATGTACTCGTTAATTCTCCGGGAAAGATCTGGATCCATCACAGGGTCCTTATGGAACCGA 60 |||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||| Sbjct 21 ATGTACTCGTTAATTCTCCGGGAACGATCTGGATCCTTCACAGGGTCCTTATGGAGCCGA 80 Query 61 ATATCCTCTCGGAACATGGGTGGTGGTCCGAGAACCTTCCCTGGAGGACTAAACAAGTGG 120 || | ||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct 81 ATCTTCTCACGGAACATGGGTGGTGGTCCGAGAACCTTTCCTGGAGGACTGAACAAGTGG 140 Query 121 CAGTGGAAACGTATGCACGAGAAGAAAGCTAGAGAGAAAGAGAACAAGCTCTTGGATCAA 180 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 141 CAATGGAAACGTATGCACGAGAAGAAAGCTAGAGAGAAAGAGAACAAGCTCTTGGATCAA 200 Query 181 GAGAAACAGCTTTACGAAGCTCGAATTAGGACCGAGATCCGAGCTAAAATGTGGGGAAAT 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 201 GAGAAACAGCTTTACGAAGCTCGAATTAGGACCGAGATCCGAGCTAAAATGTGGGGTAAT 260 Query 241 CCAGATTCTGGTGAGAAAACGGCGAAATCGAAGCAGAGTCATGGACCAATGAGCCCGAAA 300 |||||||| || ||||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct 261 CCAGATTCCGGCGAGAAAACGGCGAAATCGAAGCAAAGTCACGGACCAATGAGCCCGAAA 320 Query 301 GAACATATCAAAACCTTGGCTGATCGGTTTATGAAAGCTGGAGCAGAGGATTTTTGGAAC 360 ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct 321 GAACATATCAAAACCTTGGCTGATCGGTTTATGAAAGCTGGAGCAGAAGATTTGTGGAAC 380 Query 361 GAGAACGATGGTCCGGTGAAGAAATCAGATCA---A--GGG------TC-----G---A- 400 ||||||||||| ||| ||||| |||||||| | | ||| || | | Sbjct 381 GAGAACGATGGGCCGATGAAGGAATCAGATGATGGATGGGGATTATCTCGTAGGGATAAT 440 Query 401 -GA---TCAGGTTCGGATTCGATTGATTCTACTTCTAATTCGCCTATTGATGTGAGG-AG 455 || ||||||||| |||||||||||||| ||||||||||| |||||||||||||| || Sbjct 441 GGACGGTCAGGTTCGAATTCGATTGATTCTTCTTCTAATTCGTCTATTGATGTGAGGAAG 500 Query 456 ATTAGTTTCTGCGACATGTGATTCTATGGGTAAAAATCGTGTTTTCGGTAGTAGTAGGAG 515 |||||| || ||||||| |||| |||||||| | ||| ||||||| | |||||||||| Sbjct 501 -TTAGTTAGTGGGACATGTTATTCAATGGGTAATAGTCGGGTTTTCGATCGTAGTAGGAG 559 Query 516 AGGTTTTTCGAG--T-A-T-GA-GTAGATTTAAGAGAAATGAGAGTTCTTGTGATGAAGG 569 |||||||||||| | | | || ||||||||||||||||||||||||||||||||||||| Sbjct 560 AGGTTTTTCGAGTATGAGTAGAGGTAGATTTAAGAGAAATGAGAGTTCTTGTGATGAAGG 619 Query 570 AGATGACTTTGATGCTAAAAAGCTAGATACTTTGAGTCCTTTTTCTCCTAAATTTGCTGG 629 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || Sbjct 620 AGATGACTTTGATGCTAAAAAGTTAGATACTTTGAGTCCTTTTTCTCCTAAATTTGCGGG 679 Query 630 TACCAAGGAGAAAGTGAAGAGCTCGAGGAGTGTTGTTGGAGTTATAAGGAACAAAGGTTT 689 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 680 TACCAAGGAGAAAGTGAAGAGCTCGAAGAGTGTTGTTGGAGTTATAAGGAACAAAGGTTT 739 Query 690 GTTTGGAAGAAGGAAGTTTAGGAAGAACGATAGTTCAACTGAAGAGGATTCAGATGAAGA 749 |||||| |||||||||||||||||||| |||||||| ||||||||||||||||| ||||| Sbjct 740 GTTTGGGAGAAGGAAGTTTAGGAAGAATGATAGTTCTACTGAAGAGGATTCAGAGGAAGA 799 Query 750 AGGCGATGAGGGAAAGATGATA-GGTTGGATGGATATGAGGAAAACGGGAAGCAGTGCGT 808 |||||| ||||||||||||| | | |||| ||||| ||||||||| ||||||||||||| Sbjct 800 AGGCGAAGAGGGAAAGATGA-ACGTTTGGTTGGATTTGAGGAAAATGGGAAGCAGTGCGG 858 Query 809 CGTTAGGGAACCACGATATCAAGCTGACGAAAAGAGTGAATCGTAATGTCACGGATGAAG 868 | ||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 859 CCTTAGGAAACCATGATATCAAACTGACGAAAAGAGTGAATCGTAATGTCACGGATGAAG 918 Query 869 AGCTTTATCCTCCTTTGGATATTAATACAGTTAGAGAAGATCTCAGTAAAAGAAAATCTG 928 ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct 919 AGCTTTATCCTCCTTTGGATATTAATACAGTCAGAGAAGATCTTAGTAAAAGAAAATCTG 978 Query 929 TGGATAATGTAATGGAGGAGAAGCAAGAGCCTCATGACTCGATTTACAGTGCAAAAAGAT 988 |||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||| Sbjct 979 TGGATAATGTAATGGAGGAGAACCGAGAGCCTCATGACTCGATTTACAGTGGAAAAAGAT 1038 Query 989 TTGATGAGTCTTGTATATCTCCTTTGACGCTAAAGGCACTTTCTGCGTCTGGCATTCTTA 1048 ||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||| ||| Sbjct 1039 TTGATGAGTCTAGTATATCTCCTTTGACGCTAAAGGCGCTTTCTGTGTCTGGCATTGTTA 1098 Query 1049 AGATGACTAGAGTACAGGATGCCACTCTCTCTGAGTGCCTAGACGGTAAAGATGCATTAG 1108 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1099 AGATGACTAGAGTACAGGATGCCACTCTCTCTGAGTGCCTAGATGGTAAAGATGCATTAG 1158 Query 1109 TCAAAGCCAAAACTGGGACGGGAAAGAGCATGGCGTTTTTGCTTCCTGCAATTGAAACAG 1168 ||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||| Sbjct 1159 TCAAAGCCAAAACCGGGACAGGAAAAAGCATGGCGTTTTTGCTTCCTGCAATTGAAACAG 1218 Query 1169 TTCTGAAAGCTATGAACAGCGGTAAGGGCGTTAACAAAGTTGCTCCGATTTTTGCTCTTA 1228 ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct 1219 TTCTGAAAGCTATGAACAGCGGTAATGGCGTTCACAAAGTTGCTCCGATTTTTGCTCTTA 1278 Query 1229 TCCTCTGTCCCACAAGAGAACTTGCAAGCCAGATCGCTGCAGAGGGCAAGGCTCTACTCA 1288 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1279 TCCTCTGCCCCACAAGAGAACTTGCAAGCCAGATCGCTGCAGAGGGCAAGGCTCTGCTCA 1338 Query 1289 AATTCCATGACGGGATTGGTGTTCAGACTCTAATTGGTGGTACACGCTTCAAACTTGATC 1348 ||| |||||||||||| |||||||||||||||||||||||||| |||||||||||||||| Sbjct 1339 AATACCATGACGGGATCGGTGTTCAGACTCTAATTGGTGGTACCCGCTTCAAACTTGATC 1398 Query 1349 AACAACGCCTAGAATCTGAGCCATGTCAGATACTAATAGCAACTCCGGGAAGACTCTTGG 1408 | ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct 1399 AGCAACGCCTAGAATCTGAGCCATGCCAGATACTAATTGCAACTCCGGGAAGACTCTTGG 1458 Query 1409 ATCATATAGAGAATAAGTCTGGCTTAACATCGCGTTTGATGGCGCTTAAATTGTTTATAG 1468 |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| Sbjct 1459 ATCATATAGAGAATAAGTCTGGGTTAACATCGCGTTTGATGGCGCTGAAATTGTTTATAG 1518 Query 1469 TTGACGAGGCTGACCTTTTGCTAGACTTAGGATTCAGGAGAGATGTCGAAAAAATCATAG 1528 |||| |||||||| ||||| || ||||||||||| ||||||||||||||||||||||| | Sbjct 1519 TTGATGAGGCTGATCTTTTACTTGACTTAGGATTTAGGAGAGATGTCGAAAAAATCATTG 1578 Query 1529 ATTGTTTGCCTCGTCAGAGACAATCTCTTCTCTTTTCTGCAACCATTCCGAAAGAGGTCC 1588 ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct 1579 ATTGTTTGCCTCGTCAGAGACAATCTCTTCTCTTTTCCGCAACCATTCCAAAAGAGGTCC 1638 Query 1589 GTCGAGTCTCACAGCTTGTTTTGAAAAGGGATCACTCTTATATCGACACAATCGGGCTCG 1648 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct 1639 GTCGAGTCTCACAGCTTGTTTTGAAAAGGGATCACTCTTATATCGACACAATCGGTCTTG 1698 Query 1649 GTTGTGTAGAGACTCATGATAAGGTGAGGCAATCTTGTATTGTTGCTCCACACGAATCTC 1708 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1699 GTTGTGTAGAGACTCATGATAAGGTGAAGCAATCTTGTATTGTTGCTCCACACGAATCTC 1758 Query 1709 ATTTCCACTTAGTACCTCATCTTCTAAAAGAGCACATCAACAACACGCCTGATTATAAGA 1768 |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1759 ATTTCCACTTGGTACCTCATCTTCTAAAAGAGCACATCAACAACACGCCTGATTACAAGA 1818 Query 1769 TAATAGTCTTTTGCTCAACCGGTATGGTAACATCACTGATGTATACTCTACTCCGGGAAA 1828 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1819 TAATAGTCTTTTGCTCAACCGGTATGGTAACATCACTGATGTATACTCTGCTCCGGGAAA 1878 Query 1829 TGAAATTGAACGTTAGGGAGATTCATGCTAGAAAACCTCAGCTCCATAGAACACGTGTAT 1888 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1879 TGAAATTGAGCGTTAGGGAGATTCATGCTAGAAAACCTCAGCTCCATAGAACACGTGTAT 1938 Query 1889 CAGACGAGTTTAAGGAATCAAATAGACTGATTCTT-GTCACATCTGATGTATCTGCTCGT 1947 |||||||||||||||||||||| ||||||||| || |||||||||||||||||||||||| Sbjct 1939 CAGACGAGTTTAAGGAATCAAAAAGACTGATT-TTGGTCACATCTGATGTATCTGCTCGT 1997 Query 1948 GGAATGAACTATCCAGATGTTACTTTGGTTATTCAGGTCGGTATACCGAGTGACAGAGAA 2007 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1998 GGAATGAACTATCCAGATGTTACTTTGGTTATTCAGGTCGGTATACCGAGTGACAGAGAA 2057 Query 2008 CAGTATATACATCGACTAGGTAGAACTGGAAGAGAAGGAAAAGGAGGAGAAGGATTGCTT 2067 |||||||||||||| || |||||||| || |||||||| |||||||| |||||||||||| Sbjct 2058 CAGTATATACATCGGCTTGGTAGAACCGGGAGAGAAGGCAAAGGAGGTGAAGGATTGCTT 2117 Query 2068 TTGATTGCGCCATGGGAGAGATATTTTCTTGATGAGCTTAAAGATTTGCCACTTGAACCA 2127 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 2118 TTGATTGCGCCATGGGAGAGATATTTTCTTGATGAGCTTAAAGATTTGCCTCTTGAGCCA 2177 Query 2128 ATTCCAGCTCCGGATCTTGATTCAATAGTTAAACATCAGGTTGATCAGTCGATGGCTAAG 2187 ||||||| ||| ||||||||||||| |||||||| |||| |||||||||| ||||||||| Sbjct 2178 ATTCCAGTTCCAGATCTTGATTCAAGAGTTAAACTTCAGATTGATCAGTCTATGGCTAAG 2237 Query 2188 ATTGATACAAGTATCAAAGAAGCAGCGTACCATGCATGGCTCGGTTATTACAACTCGGTT 2247 |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct 2238 ATTGATACAAGTATTAAAGAAGCAGCGTACCATGCTTGGCTCGGTTATTACAACTCGGTT 2297 Query 2248 CGAGAAACCGGTAGAGACAAAACCACGTTAGCCGAGTTAGCTAATCGGTTTTGCCATTCT 2307 |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct 2298 AGAGAAACCGGTAGAGACAAAACCACGTTGGCCGAGTTAGCTAACCGGTTTTGCCATTCT 2357 Query 2308 ATCGGTTTAGAGAAACCTCCTGCTTTGTTTCGAAGAACCGCGGTTAAGATGGGTCTCAAA 2367 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 2358 ATCGGTTTAGAGAAACCTCCTGCTTTGTTTCGAAGAACGGCGGTTAAGATGGGTCTCAAA 2417 Query 2368 GGTATTTCTGGTATTCCAATCCGAAAATAAACCGACCTGTGTTGGT 2413 ||||||||||||||||||||||||||||||||||||| | |||||| Sbjct 2418 GGTATTTCTGGTATTCCAATCCGAAAATAAACCGACCCGGGTTGGT 2463 > Ahg315081 jgi|Araly1|315081|fgenesh1_pm.C_scaffold_2000114 Length=2382 Score = 2846 bits (1541), Expect = 0.0 Identities = 1872/2028 (92%), Gaps = 38/2028 (2%) Strand=Plus/Plus Query 1 ATGTACTCGTTAATTCTCCGGGAAAGATCTGGATCCATCACAGGGTCCTTATGGAACCGA 60 |||||||||||||||||||||||| ||||||||||| |||||||||||||||||| || | Sbjct 1 ATGTACTCGTTAATTCTCCGGGAACGATCTGGATCCTTCACAGGGTCCTTATGGAGCCAA 60 Query 61 ATATCCTCTCGGAACATGGGTGGTGGTCCGAGAACCTTCCCTGGAGGACTAAACAAGTGG 120 || | |||||||||||||||||||||||||||||| ||||||||||| || ||||||||| Sbjct 61 ATCTTCTCTCGGAACATGGGTGGTGGTCCGAGAACTTTCCCTGGAGGGCTGAACAAGTGG 120 Query 121 CAGTGGAAACGTATGCACGAGAAGAAAGCTAGAGAGAAAGAGAACAAGCTCTTGGATCAA 180 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 CAATGGAAACGTATGCACGAGAAGAAAGCTAGAGAGAAAGAGAACAAGCTCTTGGATCAA 180 Query 181 GAGAAACAGCTTTACGAAGCTCGAATTAGGACCGAGATCCGAGCTAAAATGTGGGGAAAT 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 GAGAAACAGCTTTACGAAGCTCGAATTAGGACCGAGATCCGAGCTAAAATGTGGGGAAAT 240 Query 241 CCAGATTCTGGTGAGAAAACGGCGAAATCGAAGCAGAGTCATGGACCAATGAGCCCGAAA 300 |||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 241 CCAGATTCCGGCGAGAAAACGGCGAAATCGAAGCAGAGTCACGGACCAATGAGCCCGAAA 300 Query 301 GAACATATCAAAACCTTGGCTGATCGGTTTATGAAAGCTGGAGCAGAGGATTTTTGGAAC 360 |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct 301 GAACATATCAAAACTTTGGCTGATCGGTTTATGAAAGCTGGAGCAGAGGATTTGTGGAAC 360 Query 361 GAGAACGATGGTCCGGTGAAGAAATCAGATCAAGGGTC--GA--GA-TC--A-GG-T--T 409 ||||||||||| ||||||||| |||||||| | ||||| || | || | || | | Sbjct 361 GAGAACGATGGGCCGGTGAAGGAATCAGATGATGGGTCGGGATTAACTCGTAGGGATAAT 420 Query 410 ---CGG--A--TTCG-ATT-GA----TTCTACTTCTAATTCGCCTATTGATGTGAGG-AG 455 ||| | |||| ||| || |||| ||||||||||| |||||||||||||| || Sbjct 421 GGACGGTCAGGTTCGAATTCGATTGTTTCTTCTTCTAATTCGTCTATTGATGTGAGGAAG 480 Query 456 ATTAGTTTCTGCGACATGTGATTCTATGGGTAAAAATCGTGTTTTCGGTAGTAGTAGGAG 515 |||||| || ||||||| |||| |||||||| | ||| ||||||| | |||||||||| Sbjct 481 -TTAGTTAGTGGGACATGTTATTCAATGGGTAATAGTCGGGTTTTCGATCGTAGTAGGAG 539 Query 516 AGGTTTTTCGAG--T-A-T-GA-GTAGATTTAAGAGAAATGAGAGTTCTTGTGATGAAGG 569 |||||||||||| | | | || ||||||||||||||||||||||||||||||||||||| Sbjct 540 AGGTTTTTCGAGTATGAGTAGAGGTAGATTTAAGAGAAATGAGAGTTCTTGTGATGAAGG 599 Query 570 AGATGACTTTGATGCTAAAAAGCTAGATACTTTGAGTCCTTTTTCTCCTAAATTTGCTGG 629 |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| || Sbjct 600 AGATGACTTTGATGCTAAAAAGTTAGATACTTTGAGTCCTTTTTCTCTTAAATTTGCGGG 659 Query 630 TACCAAGGAGAAAGTGAAGAGCTCGAGGAGTGTTGTTGGAGTTATAAGGAACAAAGGTTT 689 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 660 TACCAAGGAGAAAGTGAAGAGCTCGAGGAGTGTTGACGGAGTTATAAGGAACAAAGGTTT 719 Query 690 GTTTGGAAGAAGGAAGTTTAGGAAGAACGATAGTTCAACTGAAGAGGATTCAGATGAAGA 749 |||||| | ||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct 720 GTTTGGTCGGAGGAAGTTTAGGAAGAATGATAGTTCAACTGAAGAGGATTCAGAGGAAGA 779 Query 750 AGGCGATGAGGGAAAGATGATAGGTTGGATGGATATGAGGAAAACGGGAAGCAGTGCGTC 809 |||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||| Sbjct 780 AGGCGAAGAGGGAAAGATGATAGGTTGGATGGATTTGAGGAAAACAGGAAGCAGTGCGTC 839 Query 810 GTTAGGGAACCACGATATCAAGCTGACGAAAAGAGTGAATCGTAATGTCACGGATGAAGA 869 |||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct 840 GTTAGGAAACCACGATATCAAACTGACGAAAAGAGTGAATCGTAATGTCACGGACGAAGA 899 Query 870 GCTTTATCCTCCTTTGGATATTAATACAGTTAGAGAAGATCTCAGTAAAAGAAAATCTGT 929 ||| |||||||| || |||||||||||||| ||||||||||||||||||||||||||||| Sbjct 900 GCTATATCCTCCGTTAGATATTAATACAGTCAGAGAAGATCTCAGTAAAAGAAAATCTGT 959 Query 930 GGATAATGTAATGGAGGAGAAGCAAGAGCCTCATGACTCGATTTACAGT-GCAAAAAGAT 988 |||||||||||| ||||||| | |||||||||||||||| |||||||| | ||||||| Sbjct 960 GGATAATGTAATAAAGGAGAACCGAGAGCCTCATGACTCGTTTTACAGTAG-GAAAAGAT 1018 Query 989 TTGATGAGTCTTGTATATCTCCTTTGACGCTAAAGGCACTTTCTGCGTCTGGCATTCTTA 1048 ||||||||||| |||||||||||||||| || ||||||||||| |||||||||||| ||| Sbjct 1019 TTGATGAGTCTAGTATATCTCCTTTGACTCTCAAGGCACTTTCCGCGTCTGGCATTGTTA 1078 Query 1049 AGATGACTAGAGTACAGGATGCCACTCTCTCTGAGTGCCTAGACGGTAAAGATGCATTAG 1108 | |||||||||||||| ||||||||||||||||||||||| || ||||||||||| |||| Sbjct 1079 ATATGACTAGAGTACAAGATGCCACTCTCTCTGAGTGCCTCGATGGTAAAGATGCGTTAG 1138 Query 1109 TCAAAGCCAAAACTGGGAC-GGGAAAGAGCATGGCGTTTTTGCTTCCTGCAATTGAAACA 1167 ||||||||||||| ||||| |||||| |||||||| |||||||||||||||||||||||| Sbjct 1139 TCAAAGCCAAAACCGGGACGGGGAAA-AGCATGGCCTTTTTGCTTCCTGCAATTGAAACA 1197 Query 1168 GTTCTGAAAGCTATGAACAGCGGTAAGGGCGTTAACAAAGTTGCTCCGATTTTTGCTCTT 1227 ||||||||||||||||||| |||||| | ||| |||||||| |||| || ||||||||| Sbjct 1198 GTTCTGAAAGCTATGAACAACGGTAACAGTGTTCACAAAGTTCCTCCAATATTTGCTCTT 1257 Query 1228 ATCCTCTGTCCCACAAGAGAACTTGCAAGCCAGATCGCTGCAGAGGGCAAGGCTCTACTC 1287 |||||||||||||||||||||||||| || ||||| |||||||||||| |||||| ||| Sbjct 1258 ATCCTCTGTCCCACAAGAGAACTTGCGAGTCAGATTTCTGCAGAGGGCATGGCTCTGCTC 1317 Query 1288 AAATTCCATGACGGGATTGGTGTTCAGACTCTAATTGGTGGTACACGCTTCAAACTTGAT 1347 |||| ||| ||||| || |||||||||||| ||||||| ||||| ||||||||||||||| Sbjct 1318 AAATACCACGACGGTATCGGTGTTCAGACTTTAATTGGAGGTACCCGCTTCAAACTTGAT 1377 Query 1348 CAACAACGCCTAGAATCTGAGCCATGTCAGATACTAATAGCAACTCCGGGAAGACTCTTG 1407 || |||||||||||||| |||||||| ||||||||||| |||||||| |||||||||||| Sbjct 1378 CAGCAACGCCTAGAATCCGAGCCATGCCAGATACTAATTGCAACTCCAGGAAGACTCTTG 1437 Query 1408 GATCATATAGAGAATAAGTCTGGCTTAACATCGCGTTTGATGGCGCTTAAATTGTTTATA 1467 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1438 GATCATATAGAGAATAAGTCTGGCTTAACATCACGTTTGATGGCGCTTAAATTGTTTATA 1497 Query 1468 GTTGACGAGGCTGACCTTTTGCTAGACTTAGGATTCAGGAGAGATGTCGAAAAAATCATA 1527 ||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1498 GTTGATGAGGCTGATCTTTTACTAGACTTAGGATTCAGGAGAGATGTCGAAAAAATCATA 1557 Query 1528 GATTGTTTGCCTCGTCAGAGACAATCTCTTCTCTTTTCTGCAACCATTCCGAAAGAGGTC 1587 ||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||| Sbjct 1558 GATTGTTTGCCTCGTCAAAGACAATCTCTTCTCTTTTCTGCAACCATCCCAAAAGAGGTC 1617 Query 1588 CGTCGAGTCTCACAGCTTGTTTTGAAAAGGGATCACTCTTATATCGACACAATCGGGCTC 1647 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1618 CGTCGAGTCTCGCAGCTTGTTTTGAAAAGGGATCACTCTTATATCGACACAATCGGTCTT 1677 Query 1648 GGTTGTGTAGAGACTCATGATAAGGTGAGGCAATCTTGTATTGTTGCTCCACACGAATCT 1707 |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||| Sbjct 1678 GGTTGTGTAGAGACTCATGATAAGGTGAAGCAATCTTGTATTGTTGCTCCTCACGATTCT 1737 Query 1708 CATTTCCACTTAGTACCTCATCTTCTAAAAGAGCACATCAACAACACGCCTGATTATAAG 1767 ||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||| Sbjct 1738 CATTTCCACTTAGTACCTCATCTACTAAAAGAGCACATCAGCAACACGCTTGATTATAAG 1797 Query 1768 ATAATAGTCTTTTGCTCAACCGGTATGGTAACATCACTGATGTATACTCTACTCCGGGAA 1827 ||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct 1798 ATAATAGTCTTCTGCTCAACTGGTATGGTAACATCACTGATGTATACTCTGCTCCGGGAA 1857 Query 1828 ATGAAATTGAACGTTAGGGAGATTCATGCTAGAAAACCTCAGCTCCATAGAACACGTGTA 1887 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1858 ATGAAATTGAACGTTAGGGAGATTCATGCTAGAAAACCTCAGCTTCATAGAACACGTGTA 1917 Query 1888 TCAGACGAGTTTAAGGAATC-AAATAGACTGATTCTTGTCACATCTGATGTATCTGCTCG 1946 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct 1918 TCAGACGAGTTTAAGGAATCGAAA-AGACTGATTCTTGTCACATCTGATGTATCTGCTCG 1976 Query 1947 TGGAATGAACTATCCAGATGTTACTTTGGTTATTCAGGTCGGTATACC 1994 ||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct 1977 TGGAATGAACTATCCAGATGTTACTTTGGTTATACAGGTGGGTATACC 2024 Score = 527 bits (285), Expect = 2e-148 Identities = 314/328 (96%), Gaps = 1/328 (0%) Strand=Plus/Plus Query 2070 GATTGCGCCATGGGAGAGATATTTTCTTGATGAGCTTAAAGATTTGCCACTTGAACCAAT 2129 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 2056 GATTGC-CCATGGGAGAGATATTTTCTTGATGAGCTTAAAGATTTGCCTCTTGAACCAAT 2114 Query 2130 TCCAGCTCCGGATCTTGATTCAATAGTTAAACATCAGGTTGATCAGTCGATGGCTAAGAT 2189 ||||| ||| ||||||||||||| |||||| | ||||||||||||||| ||||||||||| Sbjct 2115 TCCAGTTCCAGATCTTGATTCAAGAGTTAATCTTCAGGTTGATCAGTCAATGGCTAAGAT 2174 Query 2190 TGATACAAGTATCAAAGAAGCAGCGTACCATGCATGGCTCGGTTATTACAACTCGGTTCG 2249 |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 2175 TGATACAAGTATTAAAGAAGCAGCGTACCATGCTTGGCTCGGTTATTACAACTCGGTTCG 2234 Query 2250 AGAAACCGGTAGAGACAAAACCACGTTAGCCGAGTTAGCTAATCGGTTTTGCCATTCTAT 2309 |||||| |||||||||||||||||||| ||||||||||| || ||||||||||||||||| Sbjct 2235 AGAAACAGGTAGAGACAAAACCACGTTGGCCGAGTTAGCCAACCGGTTTTGCCATTCTAT 2294 Query 2310 CGGTTTAGAGAAACCTCCTGCTTTGTTTCGAAGAACCGCGGTTAAGATGGGTCTCAAAGG 2369 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2295 CGGTTTAGAGAAACCTCCTGCTTTGTTTCGAAGAACCGCGGTTAAGATGGGTCTCAAAGG 2354 Query 2370 TATTTCTGGTATTCCAATCCGAAAATAA 2397 |||||||||||||||||||||||||||| Sbjct 2355 TATTTCTGGTATTCCAATCCGAAAATAA 2382 > Ahg487703 jgi|Araly1|487703|fgenesh2_kg.6__837__AT5G08610.1 Length=2540 Score = 65.8 bits (35), Expect = 2e-09 Identities = 154/208 (74%), Gaps = 22/208 (11%) Strand=Plus/Plus Query 1921 CTTGTCACATCTGATGTATCTGCTCGTGGAAT-GAACTATCCAGATGT-TACTTTGGTTA 1978 ||||||||||||||||||||||||||||| | || || || ||||| | | || || Sbjct 1959 CTTGTCACATCTGATGTATCTGCTCGTGGTGTCGAT-TACCCTGATGTGT-CATTAGTCG 2016 Query 1979 TTCAGGTCGGTATA-CCGAGT--GACAGAGAACAGTATATACATCGACTAGGTAGAACTG 2035 | ||| | || || || | | ||||| || |||||||||||| |||| || ||||| | Sbjct 2017 TACAGATGGG-ATTGCC-A-TCAGACAGGGAGCAGTATATACATAGACTTGGCAGAACGG 2073 Query 2036 GAAGAGAA-GGAAAAGGA-GGAGAAGGATTGCTT-TTGATTG-CGCCATGGGA-GAGATA 2090 | | ||| || || ||| || |||||| | || ||| ||| | |||||||| ||| || Sbjct 2074 GGCG-GAAAGGTAA-GGAAGGGGAAGGAGTA-TTATTG-TTGGCACCATGGGAAGAG-TA 2128 Query 2091 TTTTCT-TGATGAGCTTAAAGATTTGCC 2117 ||| | | || | ||||||| ||||| Sbjct 2129 CTTTATGTCATCTG-TTAAAGACTTGCC 2155 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 98501373570 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5