BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G64060.1
Length=3941
Score E
Sequences producing significant alignments: (Bits) Value
Ahg474949 jgi|Araly1|474949|fgenesh2_kg.2__79__AT1G64060.1 5930 0.0
> Ahg474949 jgi|Araly1|474949|fgenesh2_kg.2__79__AT1G64060.1
Length=3845
Score = 5930 bits (3211), Expect = 0.0
Identities = 3663/3873 (95%), Gaps = 63/3873 (2%)
Strand=Plus/Plus
Query 91 aaaaaaaaCAACTCCAATAATACTTTTTGATTTTCTTTTCGTTGCATTAAAATAAATGTG 150
|||||||| || |||||||||||||||| | | ||| ||||||||||||||||| ||
Sbjct 1 AAAAAAAAAAAGTCCAATAATACTTTTT-AAAAAC-TTT-GTTGCATTAAAATAAATATG 57
Query 151 GCAAAAATCCAATAATATTACTATTATAAGTTaaaaaaactcaaaaaaaaaaaaaaGTAT 210
|||||||||||||||||||||||||||||||| ||||| || || |||||| ||||
Sbjct 58 ACAAAAATCCAATAATATTACTATTATAAGTTATAAAAA---AATTAACAAAAAAGGTAT 114
Query 211 ATTCCGTCAAC-TTTTT-CTCAGTCCGGTTC-AAT-CATCTCCATCATCGTTGAtctctc 266
||||||||||| ||||| | ||||||||||| ||| | ||||||||||||||| |||||
Sbjct 115 ATTCCGTCAACTTTTTTCCACAGTCCGGTTCAAATCCTTCTCCATCATCGTTG--CTCTC 172
Query 267 tctctcCGTCAACGTTCTCTCTATAAAGCAGAGAGTTTCACAGCGCGTGAAAAATGGCTT 326
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 173 TCTCTCCGTCAACGTTCTCTCTATAAAGCAGAGAGTTTCACAGCGCGTGAATAATGGTTT 232
Query 327 TTCCCACTTAGCCACAACGACGCGTTTCAATtctccatctctccctctctctctctctTT 386
|||||||| |||||| ||||||||||| || | | ||||| ||||||||||||||||
Sbjct 233 TTCCCACTGAGCCACGACGACGCGTTTGAA--AT--A-CTCTCTCTCTCTCTCTCTCTTT 287
Query 387 CTTCAAAGATTCCACCAACCTATACAT--A--TA-CT-TATATAT-AATCTATGCTACGT 439
||||||||||||||||||||||||||| | || | ||||||| ||||||||||||||
Sbjct 288 CTTCAAAGATTCCACCAACCTATACATACACTTATATATATATATAAATCTATGCTACGT 347
Query 440 GTATATACTTCCGATATCCTTCAACCAACTCTTTG-A----ATTCCGACTTTGGATCTAT 494
||||||||||||||||||||||| ||||| ||||| | ||||||| |||||||||||
Sbjct 348 GTATATACTTCCGATATCCTTCACCCAACACTTTGAATCCGATTCCGATTTTGGATCTAT 407
Query 495 GAAACCGTTCTCAAAGAACGATCGGCGACGGTGGTCATTTGATTCAGTTTCCGCCGGAAA 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 408 GAAACCGTTCTCAAAGAACGATCGGCGACGGTGGTCATTTGATTCAGTTTCCGCCGGAAA 467
Query 555 AACCGCCGTCGGAAGTGCATCAACTTCACCGGGAACTGAATACTCCATTAACGGTGATCA 614
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 468 AACCGCCGTCGGAAGTGCATCTACTTCACCGGGAACTGAATACTCCATTAACGGTGATCA 527
Query 615 AGAGTTCGTTGAAGTCACAATCGATCTTCAAGACGATGACACAATCGTTCTTCGTAGCGT 674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 528 AGAGTTCGTTGAAGTCACAATCGATCTTCAAGACGATGACACAATCGTTCTTCGTAGCGT 587
Query 675 CGAGCCAGCAACCGCCATTAATGTCATCGGAGATATCTCCGACGACAAC-ACCGGAATAA 733
||||||||||| | || | ||| |||||||||||||||||| || ||||||||||
Sbjct 588 CGAGCCAGCAA----C--TACCGCCATTGGAGATATCTCCGACGAC-ACAACCGGAATAA 640
Query 734 TGACTCCGGTTTCGATTTCGAGATCTCCGACGATGAAACGAACTTCATCTAATCGGTTCC 793
||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||
Sbjct 641 TGACTCCGGTTTCGATTTCTAGATCTCCGACGATGAAACGGACTTCATCGAATCGGTTCC 700
Query 794 GACAATTCTCACAAGAGCTTAAAGCCGAAGCTGTGGCGAAAGCGAAACAGTTATCTCAGG 853
| |||||||||||||||||||| || ||||||||||| || |||||||||||||||||||
Sbjct 701 GTCAATTCTCACAAGAGCTTAAGGCGGAAGCTGTGGCCAAGGCGAAACAGTTATCTCAGG 760
Query 854 AGTTGAAACGATTCTCATGGTCTCGTTCTTTCTCAGGTAACTTAACCACTACTAGTACCG 913
| |||||||||||||| |||||||||||||| ||||| || |||||||| || |||||||
Sbjct 761 AATTGAAACGATTCTCGTGGTCTCGTTCTTTTTCAGGCAATTTAACCACCACCAGTACCG 820
Query 914 CCGCTAATCAAAGCGGCGGTGCTGGTGGTGGTTTGGTGAACTCGGCTTTAGAAGCGCGAG 973
||||||||||||||||| | || |||||||||||||| ||||||||||||||||| ||||
Sbjct 821 CCGCTAATCAAAGCGGC-G-GC-GGTGGTGGTTTGGTAAACTCGGCTTTAGAAGCTCGAG 877
Query 974 CGTTGCGAAAGCAACGTGCTCAGTTAGATCGGACTCGGTCTAGTGCTCAAAGAGCTCTTC 1033
|||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 878 CGTTGCGAAAACAACGAGCTCAGTTAGATCGGACTCGGTCTAGTGCTCAAAGAGCTCTTC 937
Query 1034 GTGGTTTGAGATTCATTAGCAATAAGCAAAAGAACGTTGATGGTTGGAACGATGTTCAAT 1093
|||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||
Sbjct 938 GTGGTTTGAGATTCATCAGCAACAAGCAAACGAACGTTGATGGTTGGAACGATGTTCAAT 997
Query 1094 CAAATTTCGAAAAATTCGaaaaaaaTGGTTACATCTATCGCTCCGATTTCGCTCAATGCA 1153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 998 CAAATTTCGAAAAATTCGAAAAAAATGGTTACATCTATCGCTCCGATTTCGCTCAATGCA 1057
Query 1154 TAGGAATGAAAGATTCGAAAGAATTTGCATTGGAACTGTTCGATGCATTGAGTAGAAGAA 1213
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1058 TAGGAATGAAAGATTCTAAAGAATTTGCATTGGAACTGTTCGATGCATTGAGTAGAAGAA 1117
Query 1214 GAAGATTAAAAGTAGAGAAAATCAATCACGATGAGCTTTATGAGTATTGGTCACAAATCA 1273
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1118 GAAGATTAAAAGTTGAGAAAATCAATCACGATGAGCTTTATGAGTATTGGTCACAAATCA 1177
Query 1274 ACGACGAGAGTTTTGATTCTCGTCTCCAGATCTTCTTCGACATAGTGGACAAGAATGAAG 1333
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1178 ACGACGAAAGTTTTGATTCTCGTCTCCAGATCTTCTTCGACATAGTGGACAAGAATGAAG 1237
Query 1334 ATGGGAGAATTACAGAAGAGGAAGTAAAAGAGATAATAATGTTGAGTGCATCTGCAAATA 1393
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1238 ATGGGAGAATTACAGAAGAGGAAGTAAAGGAGATAATAATGTTGAGTGCATCTGCAAATA 1297
Query 1394 AGCTATCAAGATTAAAGGAACAAGCAGAGGAATATGCAGCTTTGATTATGGAAGAGTTAG 1453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1298 AGCTATCAAGATTAAAGGAACAAGCAGAGGAATATGCAGCTTTGATTATGGAAGAGTTAG 1357
Query 1454 ATCCTGAAAGACTTGGCTACATAGAGCTATGGCAACTAGAGACTTTGCTTCTACAAAAAG 1513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1358 ATCCTGAAAGACTTGGCTACATAGAGCTATGGCAACTAGAGACTTTGCTTCTACAAAAAG 1417
Query 1514 ACACATACCTCAATTACAGTCAAGCATTGAGCTATACGAGCCAAGCATTGAGCCAAAACC 1573
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1418 ACACATACCTCAATTACAGTCAAGCATTGAGCTATACAAGCCAAGCATTGAGCCAAAACC 1477
Query 1574 TTCAAGGGTTAAGGGGAAAGAGTCGAATACATAGAATGAGTTCGGATTTCGTCTACATT- 1632
||||||||||| | |||||||||||||||| ||||||||||| ||||||||||| ||
Sbjct 1478 TTCAAGGGTTACGAAAAAAGAGTCGAATACATCGAATGAGTTCGAATTTCGTCTAC-TTC 1536
Query 1633 ATGCAAGAGAATTGGAAAAGGATATGGGTTTTATCCTTATGGATCATGATCATGATCGGA 1692
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1537 ATGCAAGAGAATTGGAAAAGGATATGGGTTTTATCCTTATGGATCATGATCATGATCGGA 1596
Query 1693 TTATTCTTGTGGAAATTCTTCCAATACAAGCAAAAAGATGCATTTCATGTGATGGGATAT 1752
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1597 TTATTCTTATGGAAATTCTTCCAATACAAGCAAAAAGATGCATTTCATGTGATGGGTTAT 1656
Query 1753 TGTTTACTCACAGCCAAAGGAGCAGCTGAAACACTTAAATTCAACATGGCTCTAATACTT 1812
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1657 TGTTTACTCACAGCAAAAGGAGCAGCTGAAACACTTAAATTCAACATGGCTCTAATACTT 1716
Query 1813 TTCCCAGTTTGCAGAAACACCATTACTTGGCTTAGATCCACAAGACTCTCTTACTTCGTT 1872
||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1717 TTCCCGGTTTGCAGAAACACCATTACCTGGCTTAGATCCACAAGACTCTCTTACTTCGTT 1776
Query 1873 CCTTTTGATGATAATATCAACTTCCACAAGACAATTGCTGGAGCCATTGTAGTAGCTGTG 1932
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1777 CCTTTTGATGATAATATCAACTTCCACAAGACAATTGCCGGAGCCATTGTAGTAGCTGTG 1836
Query 1933 ATCCTTCATATTGGAGACCATCTTGCTTGTGATTTCCCTAGAATTGTTAGAGCCACCGAA 1992
||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct 1837 ATCCTTCATATTGGAGACCATATTGCTTGTGATTTCCCTAGAATTGTTAGAGCCACTGAA 1896
Query 1993 TACGATTACAATCGGTATCTGTTTCATTACTTTCAAACAAAACAGCCAACATACTTCGAC 2052
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1897 TACGATTACAATCGGTATCTGTTTCATTACTTTCAAACAAAACAGCCAACATACTTCGAC 1956
Query 2053 CTCGTTAAGGGACCTGAAGGAATCACTGGGATTTTAATGGTCATTTTGATGATTATTTCA 2112
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1957 CTCGTTAAGGGACCTGAAGGAATCACAGGGATTTTAATGGTCATTTTGATGATTATTTCA 2016
Query 2113 TTCACATTAGCAACAAGATGGTTTAGGCGTAACCTAGTCAAGCTTCCTAAGCCATTTGAT 2172
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2017 TTCACATTAGCAACAAGATGGTTTAGGCGTAACCTCGTCAAGCTTCCTAAGCCATTTGAT 2076
Query 2173 CGACTAACCGGTTTTAACGCCTTTTGGTATTCGCATCATTTGTTCGTCATTGTTTATATC 2232
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2077 CGACTTACCGGTTTTAACGCCTTTTGGTATTCGCATCATTTGTTCGTCATTGTTTATATC 2136
Query 2233 TTGCTTATTCTTCATGGTATCTTCCTCTATTTCGCCAAGCCTTGGTATGTTCGTACGACA 2292
|||||||| ||||| |||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct 2137 TTGCTTATCCTTCACGGTACCTTCCTCTATTTCGCCAAGCCTTGGTATGTTCGCACGACA 2196
Query 2293 TGGATGTATCTTGCAGTACCAGTTTTACTCTATGGTGGAGAAAGAACACTTAGGTACTTC 2352
|||||||||||||| |||||| ||||||||||||| ||||| |||||||||||||| |||
Sbjct 2197 TGGATGTATCTTGCGGTACCAATTTTACTCTATGGGGGAGAGAGAACACTTAGGTATTTC 2256
Query 2353 CGTTCTGGTTCTTATTCGGTTCGACTGCTTAAGGTTGCTATATATCCTGGTAATGTTCTA 2412
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2257 CGTTCTGGTTCTTATTCGGTTCGACTGCTTAAGGTTGCTATATATCCTGGTAACGTTCTG 2316
Query 2413 ACGCTACAAATGTCGAAACCAACTCAATTTCGTTACAAAAGCGGACAATACATGTTTGTC 2472
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2317 ACGCTGCAAATGTCGAAACCAACTCAATTTCGTTACAAAAGCGGACAATACATGTTCGTC 2376
Query 2473 CAATGTCCTGCGGTTTCGCCATTCGAGTGGCATCCATTCTCAATTACTTCCGCACCTGAA 2532
||||| ||||| |||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct 2377 CAATGCCCTGCAGTTTCGCCATTCGAATGGCATCCATTCTCAATTACTTCAGCACCTGAA 2436
Query 2533 GATGATTATATCAGCATTCACATTAGACAACTTGGTGATTGGACTCAAGAACTCAAAAGA 2592
||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct 2437 GATGATTATGTCAGCATTCACATTAGACAACTCGGAGATTGGACTCAAGAACTCAAAAGA 2496
Query 2593 GTATTCTCTGAAGTTTGTGAGCCACCGGTTGGCGGTAAAAGCGGACTTCTCAGAGCCGAC 2652
|||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct 2497 GTATTCTCTGAAGTTTGTGAGCCACCAGTTGCCGGTAAAAGCGGACTTCTCAGAGCCGAT 2556
Query 2653 GAAACAACAAAGAAAAGTTTGCCAAAGCTATTGATAGATGGACCGTACGGTGCACCAGCA 2712
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2557 GAAACAACAAAGAAAAGTTTGCCAAAGCTATTGATAGATGGACCATACGGTGCACCAGCA 2616
Query 2713 CAAGATTATAGGAAATATGATGTTCTCTTATTAGTTGGTCTTGGCATTGGTGCAACTCCA 2772
||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2617 CAAGACTATAGGAAATATGATGTTCTCTTGTTAGTTGGTCTTGGCATTGGTGCAACTCCA 2676
Query 2773 TTTATCAGTATCTTGAAAGATTTGCTTAACAACATTGTTAAAATGGAAGAGCATGCGGAT 2832
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2677 TTTATCAGTATCTTGAAAGATTTGCTTAACAACATTGTTAAAATGGAAGAGCATGCGGAT 2736
Query 2833 TCGATCTCGGATTTCAGTAGATCATCAGAATACAGCACAGGAAGCAACGGTGACACGCCA 2892
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct 2737 TCGATCTCGGATTTCAGTAGATCATCAGAACACAGCACAGGAAGCAACGGTGACCCGCCA 2796
Query 2893 AGACGAAAGAGAATACTAAAAACCACAAATGCTTATTTCTACTGGGTCACAAGAGAACAA 2952
|||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2797 AGACGAAAAAGAATACTAAAAACCACAAATGCTTACTTCTACTGGGTCACAAGAGAACAA 2856
Query 2953 GGCTCTTTTGATTGGTTCAAAGGTGTCATGAACGAAGTTGCAGAACTTGACCAACGGGGT 3012
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2857 GGCTCTTTTGATTGGTTCAAAGGTGTCATGAATGAAGTTGCAGAACTTGACCAACGGGGT 2916
Query 3013 GTGATAGAGATGCATAACTATTTAACAAGTGTGTATGAAGAAGGTGATGCTCGTTCTGCT 3072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2917 GTGATAGAGATGCATAACTATTTAACAAGTGTGTATGAAGAAGGTGATGCTCGTTCTGCT 2976
Query 3073 CTCATTACAATGGTTCAAGCTCTTAATCATGCCAAAAATGGTGTCGACATTGTCTCTGGC 3132
||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct 2977 CTCATTACAATGGTTCAAGCTCTAAACCATGCCAAAAATGGTGTCGACATTGTCTCTGGC 3036
Query 3133 ACTAGGGTCAGAACACACTTTGCAAGACCTAATTGGAAGAAGGTTCTCACAAAGCTAAGT 3192
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 3037 ACTAGGGTCAGAACACACTTTGCAAGACCTAATTGGAAGAAGGTTCTCACTAAGCTAAGT 3096
Query 3193 TCCAAGCATTGCAATGCAAGAATAGGAGTGTTTTATTGCGGAGTACCGGTTTTAGGGAAG 3252
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct 3097 TCCAAGCATTGCAATGCAAGGATAGGAGTGTTTTATTGCGGAGTACCGGTTTTAGGCAAA 3156
Query 3253 GAGCTTAGCAAACTATGCAACACATTCAATCAAAAAGGTTCAACCAAGTTTGAATTTCAC 3312
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3157 GAGCTTAGCAAACTCTGCAACACATTCAATCAAAAAGGTTCAACCAAGTTTGAATTTCAC 3216
Query 3313 AAGGAGCATTTCTAAAAGACAAGAAGGAAGAAGCCAAAAGCCCTCTAGATTCTTTAATAT 3372
|||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct 3217 AAGGAGCACTTCTAAAAGACAAGATGGAAGAAGCCTAAAGCCCTCTAGATTCTTTAATAT 3276
Query 3373 CTCAAATTTAGCCACTTATAGTATAAAGGCAATCTCTTCACTATTTAATTCAAAGTGATT 3432
|||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 3277 CTCACATTTAGCCACTTATAGTATAAAAGCAATCTCTTCACTATTTAATTCAAAGTGATT 3336
Query 3433 AAACGTTAACACACTGTCAAAAGTGAGTGTGTTAACGTTTAGCTCCA-CACGTTCTAGGT 3491
||||||||||||||||||||||||||||||||||||| ||| | || ||||||||||||
Sbjct 3337 AAACGTTAACACACTGTCAAAAGTGAGTGTGTTAACGCTTAATTTCAACACGTTCTAGGT 3396
Query 3492 TTATATACACCGAGGCATACGTGTAAATATACGAGACAGAAGAAATTCAAGGGGG---TT 3548
||||||||||||||||||||||||||||||||||| ||||||| || | ||||| ||
Sbjct 3397 CTATATACACCGAGGCATACGTGTAAATATACGAGATAGAAGAATTTTACGGGGGAAGTT 3456
Query 3549 TGATAGAAGCATATAGTAAAATTTTAAAA-TTTCTTGTATAGTAAGCAAATGAGATGGAG 3607
|||||||||||||||||||| |||||||| |||||||||||||||||||| ||| |||||
Sbjct 3457 TGATAGAAGCATATAGTAAA-TTTTAAAAATTTCTTGTATAGTAAGCAAACGAGGTGGAG 3515
Query 3608 ACTCTAGAAGAGAGGTGAGGTTTGGTGAGGGATAGCGACAGTAATACGACGTCGTATTCG 3667
| |||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||
Sbjct 3516 ATTCTAGAAGAGAGGTGAGGTTTGGTGAGGGATAAAGACTGTAATACGACGTCGTTTTCG 3575
Query 3668 ATTGTAGAGGAAGTGCAATACAGCTGCAGGGAAGATAAATGATGGAAGCAAATAATGCGT 3727
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3576 ATTGAAGAGGAAGTGCAATACAGCTGCAGGGAAGATAAATGATGGAAGCAAATAATGCGT 3635
Query 3728 TGATAAGGTCCATGTGATTAGGAAGATGACACTCTTTTTGGGGGATAttttttt-ct-at 3785
||||||||||||||||||||||||||||||| | |||||||||||| ||||||| || ||
Sbjct 3636 TGATAAGGTCCATGTGATTAGGAAGATGACATT-TTTTTGGGGGAT-TTTTTTTGCTCAT 3693
Query 3786 tttttttttttAGTGGAGTCGGTGAAAGAGAGACTAGAGTTTTTAGAATATTG-GAAGA- 3843
||| |||||||||||||| ||||||||||||||||||||| |||||| ||| || ||
Sbjct 3694 TTTAAATTTTTAGTGGAGTCAGTGAAAGAGAGACTAGAGTTTCTAGAATCTTGTGAGGAT 3753
Query 3844 ATAT----TTGGGAA-TAAGGGAGTTATAATATTTTTGTATCATTGTATTATATAACTAA 3898
|| | ||||||| ||| ||||||||||||| ||| |||||| ||||||| | ||||
Sbjct 3754 ATTTGGGATTGGGAAATAAAGGAGTTATAATATCTTT--ATCATTATATTATA-A-CTAA 3809
Query 3899 TGTAAGGTGTACAAAGCATAAAATTTGATAGTT 3931
|||||||||||||||||||||||||||||||||
Sbjct 3810 TGTAAGGTGTACAAAGCATAAAATTTGATAGTT 3842
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 148957340722
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5