BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G64820.1 Length=1509 Score E Sequences producing significant alignments: (Bits) Value Ahg907722 jgi|Araly1|907722|Al_scaffold_0002_803 2200 0.0 Ahg951906 jgi|Araly1|951906|scaffold_24700001.1 1291 0.0 Ahg925891 jgi|Araly1|925891|scaffold_201452.1 1230 0.0 Ahg925784 jgi|Araly1|925784|scaffold_201345.1 433 2e-120 > Ahg907722 jgi|Araly1|907722|Al_scaffold_0002_803 Length=1503 Score = 2200 bits (1191), Expect = 0.0 Identities = 1405/1510 (93%), Gaps = 8/1510 (1%) Strand=Plus/Plus Query 1 ATGGAAACGGATTTCTCGTTGGTGCGTAAGGAGGAGGAAGAAGAAGAAGATAACAGGAAT 60 ||||||| ||||||||||||||||| ||| | || ||||||||||||||||||||| Sbjct 1 ATGGAAAAGGATTTCTCGTTGGTGC----GGA--ATGAGGAAGAAGAAGATAACAGGAAT 54 Query 61 GGGATGAGTTATTTGTCAATGGAGATGATGAAGAAGGTGAGCTCCATGGCGGCTCCAATG 120 ||| ||||||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct 55 GGGGCGAGTTATTTGTCAGTGGAGATGATGAAGAAGGTGAGTTCCATGGCAGCTCCAATG 114 Query 121 GTGGCAGTTTCGGTTTCTCAATTCCTCCTTCAAGTCATCTCCATGGTTATGGCTGGTCAT 180 |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct 115 GTGGCAGTTTCGGTTTCTCAGTTCCTCCTGCAAGTCATCTCCATGGTTATGGCTGGTCAC 174 Query 181 TTGGACGAGCTCTCGCTCTCAGCTGTCGCAATTGCCACTTCCCTCACCAATGTCACTGGT 240 |||||||||||||| ||||||||||| ||||| |||||||||||||| |||||||| ||| Sbjct 175 TTGGACGAGCTCTCACTCTCAGCTGTTGCAATCGCCACTTCCCTCACTAATGTCACCGGT 234 Query 241 TTCAGCCTCATCGTTGGGTTTGCAGGTGCGTTAGACACTCTTTGCGGTCAAGCTTTTGGA 300 || |||||||||||||||||||||||||||||||| ||||| || ||||||||||||||| Sbjct 235 TTTAGCCTCATCGTTGGGTTTGCAGGTGCGTTAGAGACTCTGTGTGGTCAAGCTTTTGGA 294 Query 301 GCAGAACAATTTGGAAAAATTGGTGCATACACTTACAGCTCAATGCTCTGTCTTCTCGTT 360 ||||||||||||||||||||||| |||||||| |||||||||||||| |||||||| || Sbjct 295 GCAGAACAATTTGGAAAAATTGGGGCATACACGTACAGCTCAATGCTTTGTCTTCTTGTC 354 Query 361 TTCTGTTTTTCAATCTCTATCGTATGGTTTTTCATGGACAAGCTCTTGGAGATTTTCCAT 420 ||||||||| || ||||| | |||||| | ||||||||||| ||||||||| | |||||| Sbjct 355 TTCTGTTTTCCAGTCTCTCTTGTATGGATCTTCATGGACAAACTCTTGGAGCTCTTCCAT 414 Query 421 CAAGATCCTCTCATCTCTCAATTAGCTTGCAGATACTCAATCTGGCTCATACCGGCTTTA 480 ||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||| Sbjct 415 CAAGATCCTCTAATCTCTCAGTTAGCTTGCAGATACTCAATCTGGCTAATACCGGCTTTA 474 Query 481 TTCGGATTCACTCTTCTTCAACCTATGACTCGGTATTTCCAGTCACAAGGAATAACTCTT 540 |||||||| |||||||||||||||||||| | |||||||||||||||||| ||| |||| Sbjct 475 TTCGGATTTGCTCTTCTTCAACCTATGACTTGCTATTTCCAGTCACAAGGATTAATTCTT 534 Query 541 CCTCTCTTCGTGAGCTCTCTTGGAGCTCTTTGTTTTCACATTCCTTTCTGTTGGCTTCTT 600 ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct 535 CCTCTCTTCGTGAGCTCTCTTGGAGCTATCTGTTTTCACATTCCTTTCTGTTGGCTTCTT 594 Query 601 GTCTATAAACTGAAATTTGGAATAGTTGGCGCCGCTTTGTCCATCGGTTTTTCATATTGG 660 ||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct 595 GTCTATAAACTGAGATTTGGAATCGTTGGCGCCGCTTTGTCCATCGGGTTTTCATATTGG 654 Query 661 CTCAACGTATTTTTGCTTTGGATTTTCATGAGAT-ACTCTGCTTTGCATCGTGAAATGAA 719 |||||||| ||||||||| ||||||||||||| | ||||||||||||||||||||||||| Sbjct 655 CTCAACGTGTTTTTGCTTCGGATTTTCATGAG-TAACTCTGCTTTGCATCGTGAAATGAA 713 Query 720 GAATCTTGGTTTGCAAGAACTCATCTCGAGCATGAAGCAGTTCATCGCCCTCGCGATCCC 779 || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 714 AAACCTTGGTTTGCAAGAACTCATCTCGAGCATGAAGCAGTTCATCGCCCTCGCTATCCC 773 Query 780 CTCTGCAATGATGATATGCCTGGAATGGTGGTCGTTTGAGATTCTACTACTAATGTCTGG 839 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 774 CTCTGCAATGATGATATGCCTGGAATGGTGGTCGTTTGAGATTCTACTACTAATGTCTGG 833 Query 840 ACTCTTACCAAACTCAAAGCTCGAAACATCGGTGATATCCATTTGCCTCACAACATCGGC 899 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 834 ACTCTTACCAAACTCAAAGCTCGAAACATCGGTGATATCCATTTGCCTCACAACATCGGC 893 Query 900 TGTGCATTTCGTTCTGGTGAATGCGATAGGAGCATCCGCAAGCACACATGTCTCAAACGA 959 | |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| Sbjct 894 TTTGCATTTCGTTCTGGTGAATGCGATAGGAGCATCCGCAAGCACATATGTTTCAAACGA 953 Query 960 GCTAGGAGCTGGAAATCATAGGGCAGCTCGAGCCGCGGTTAATTCTGCCATTTTCCTTGG 1019 |||||||||||||||||| |||||||||||||| ||||||| ||| || |||||||| || Sbjct 954 GCTAGGAGCTGGAAATCACAGGGCAGCTCGAGCGGCGGTTAGTTCGGCTATTTTCCTGGG 1013 Query 1020 TGGTGTTGGTGCATTAATAACAACCATCACACTTTACAGTTACCGAAAAAGTTGGGGTTA 1079 |||||||| |||| |||| ||| |||||||||||||||||||||||| ||||||||||| Sbjct 1014 TGGTGTTGATGCAACAATAGCAAGCATCACACTTTACAGTTACCGAAATAGTTGGGGTTA 1073 Query 1080 TGTATTCAGCAACGAGAGAGAAGTGGTTCGCTACGCAACCCAAATCACACCCATTCTCTG 1139 | ||||||||||||||| |||||||| || ||||| |||||||||||||||||||||||| Sbjct 1074 TATATTCAGCAACGAGAAAGAAGTGGCTCACTACGTAACCCAAATCACACCCATTCTCTG 1133 Query 1140 CCTATCCATTTTCGTTAACAGCTTTCTCGCCGTGCTCTCAGGGGTTGCCAGAGGATCAGG 1199 ||||| |||||||||||||| ||||| |||||||| |||||||||||||||||| |||| Sbjct 1134 CCTATTTATTTTCGTTAACAGTTTTCTTGCCGTGCTATCAGGGGTTGCCAGAGGAACAGG 1193 Query 1200 GTGGCAACGTATAGGAGGTTATGCAAGCTTAGGATCATATTATCTTGTCGGAATCCCGTT 1259 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1194 CTGGCAACGTATAGGAGGTTATGCAAGTTTAGGATCATATTATCTTGTCGGAATCCCGTT 1253 Query 1260 AGGATGGTTCTTGTGTTTTGTCATGAAATTGAGAGGGAAAGGACTTTGGATTGGTATACT 1319 ||| ||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct 1254 AGGTTGGATCTTGTGTTTTGTCATGAAGTTGAGAGGAAAAGGACTTTGGATTGGTATACT 1313 Query 1320 CATAGCCTCCACTATCCAACTCATTGTTTTTGCTCTTGTCACCTTCTTCACCAATTGGGA 1379 ||||||||||||||||||||| | ||||||| | |||||||||||||||||||||||||| Sbjct 1314 CATAGCCTCCACTATCCAACTAAGTGTTTTTACCCTTGTCACCTTCTTCACCAATTGGGA 1373 Query 1380 ACAAGAGGCAACGAAAGCTAGAGACAGAGTATTCGAGATGACACCTCAAGTCAAAGGCAA 1439 |||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||| Sbjct 1374 ACAAGAGGCAACGAGAGCCAGAGACAGAGTATTCGAGATGACACCACAAGTCAAAGGCAA 1433 Query 1440 CCAAAAAACACAAATTATAGTAGAAGAGGATACACAAGTTTTACTTAATCATATTGCAGA 1499 |||||| |||||||||||| | ||||||||||||||||||||||||||||||||| |||| Sbjct 1434 CCAAAAGACACAAATTATATTGGAAGAGGATACACAAGTTTTACTTAATCATATTACAGA 1493 Query 1500 AACTGTGTAA 1509 |||||| ||| Sbjct 1494 AACTGTTTAA 1503 > Ahg951906 jgi|Araly1|951906|scaffold_24700001.1 Length=1497 Score = 1291 bits (699), Expect = 0.0 Identities = 1128/1334 (85%), Gaps = 34/1334 (3%) Strand=Plus/Plus Query 69 TTATTTGTCAATGGAGATGATGAAGAAGGTGAGCTCCATGGCGGCTCCAATGGTGGCAGT 128 ||| |||||||| ||||||||||||||||| ||||||||||| |||||||||||||| || Sbjct 112 TTACTTGTCAATAGAGATGATGAAGAAGGTAAGCTCCATGGCTGCTCCAATGGTGGCTGT 171 Query 129 TTCGGTTTCTCAATTCCTCCTTCAAGTCATCTCCATGGTTATGGCTGGTCATTTGGACGA 188 | | |||||| | |||||||||||| |||||||| |||||||| ||||| |||||||| Sbjct 172 GGCTGCTTCTCAGTACCTCCTTCAAGTTATCTCCATTGTTATGGCCGGTCACTTGGACGA 231 Query 189 GCTCTCGCTCTCAGCTGTCGCAATTGCCACTTCCCTCACCAATGTCACTGGTTTCAGCCT 248 |||||| ||||| || || || || || ||||| || ||||| ||||| || |||||||| Sbjct 232 GCTCTCTCTCTCCGCCGTTGCTATCGCTACTTCTCTTACCAACGTCACCGGCTTCAGCCT 291 Query 249 CATCGTTGGGTTTGCAGGTGCGTTAGACACTCTTTGCGGTCAAGCTTTTGGAGCAGAACA 308 | || |||| || |||||||| ||||| || || || ||||||||||||||||| || || Sbjct 292 CCTCTTTGGATTGGCAGGTGCATTAGAGACACTGTGTGGTCAAGCTTTTGGAGCTGAGCA 351 Query 309 ATTT-GGAAAAATTGGTGCATACACTTACAGCTCAATGCTCTGTCTTCTCGTT-TTCTGT 366 |||| || ||| | ||||||| |||||| |||||||||| ||||||||| || |||||| Sbjct 352 ATTTAGG-AAAGTCAGTGCATATACTTACGGCTCAATGCTATGTCTTCTC-TTGTTCTGT 409 Query 367 TTTTCAATCT--CTATCGTATGGTTTTTCATGGACAAGCTCTTGGAGATTTTCCATCAAG 424 ||| |||||| || | || ||| ||| |||||||| ||||||||| |||||||||||| Sbjct 410 TTTCCAATCTCACTTTTGT-GGGTGTTT-ATGGACAAACTCTTGGAGCTTTTCCATCAAG 467 Query 425 ATCCTCTCATCTCTCAATTAGCTTGCAGATACTCAATCTGGCTCATACCGGCTTTATTCG 484 ||||||||||||||||| ||||||| ||||| || |||||||| |||||||||||||||| Sbjct 468 ATCCTCTCATCTCTCAACTAGCTTGTAGATATTCGATCTGGCTTATACCGGCTTTATTCG 527 Query 485 GATTCACTCTTCTTCAACCTATGACTCGGTATTTCCAGTCACAAGGAATAACTCTTCCTC 544 ||| | || |||||||| |||||||||||| |||||||||||||||| | |||||||| Sbjct 528 GATACTCTGTTCTTCAATCTATGACTCGGTTTTTCCAGTCACAAGGATTGGTTCTTCCTC 587 Query 545 TCTTCGTGAGCTCTCTTGGAGCTCTTTGTTTTCACATT-CCTTTCTGTTGGCTTCTTGTC 603 ||||| |||||||||| |||||||| |||||||||||| ||||| ||||||||||| ||| Sbjct 588 TCTTCTTGAGCTCTCTCGGAGCTCTCTGTTTTCACATTCCCTTT-TGTTGGCTTCTAGTC 646 Query 604 TATAAACTGAAATTTGGAATAGTTGGCGCCGCTTTGTCCATCGGTTTTTCATATTGGCTC 663 |||||||||| ||||||||| || ||||| ||||||||||| |||||||| ||||||||| Sbjct 647 TATAAACTGAGATTTGGAATCGTCGGCGCTGCTTTGTCCATAGGTTTTTCGTATTGGCTC 706 Query 664 AACGTATTTTTGCTTTGGATTTTCATGAGATACTCTGCTTTGCATCGTG-AAA-TGAAGA 721 |||||| |||||||||| ||||||||||| | |||||| | |||| | ||| || || Sbjct 707 AACGTAGGTTTGCTTTGGGTTTTCATGAGAAAATCTGCTCTATATCGCGAAAACTG--GA 764 Query 722 ATCTT-GGTTTGCAAGAACTCATCTCGAGCATGAAGCAGTTCATCGCCCTCGCGATCCCC 780 ||||| || ||||||| | | | |||||||||||||||||| ||||||| || ||| Sbjct 765 ATCTTCGG-GCGCAAGAAATTTTTTTGAGCATGAAGCAGTTCATTACCCTCGCAATTCCC 823 Query 781 TCTGCAATGATGA-TATGCCTGGAATGGTGGTCGTTTGAGATTC-TACTACTAATGTCTG 838 ||||||||||||| | ||||| |||||||||||||||||| ||| || |||||||||| | Sbjct 824 TCTGCAATGATGACT-TGCCTAGAATGGTGGTCGTTTGAGCTTCTTA-TACTAATGTCAG 881 Query 839 GACTCTTACCAAACTCAAAGCTCGAAACATCGGTGATATCCATTTGCCTCACAACATCGG 898 ||||||||||||||||||||||||||||||| || ||||||||||||| |||| ||| Sbjct 882 GACTCTTACCAAACTCAAAGCTCGAAACATCAGTCCTATCCATTTGCCTAACAATGTCGT 941 Query 899 CTGTGCATTTCGTTCTGGTGAATGCGATAGGAGCATCCGCAAGCACACATGTCTCAAACG 958 || | |||| ||||||||||||||| ||||||||| |||| |||||||| ||||||||| Sbjct 942 CTCTCCATTACGTTCTGGTGAATGCAATAGGAGCAGCCGCGAGCACACACGTCTCAAACA 1001 Query 959 AGCTAGGAGCTGGAAATC-ATAGGGCAGCTCGAGCCGCGGTTAATTCTGCCATTTTCCTT 1017 |||||||||||||||||| | ||| ||||||||||||||| ||||||||| ||||| || Sbjct 1002 AGCTAGGAGCTGGAAATCCAAAGG-CAGCTCGAGCCGCGGCTAATTCTGCGATTTTTCTA 1060 Query 1018 GGTGGTG-TTGGTGCATTAATAACAACCATCACACTTTACAGTTACCGAAA--AAGTTGG 1074 || | || ||| |||| |||| || |||||| || || || || ||| || |||| Sbjct 1061 GGCG-TGATTGATGCAGCAATAGTAAGCATCACTCTCTATAGCAACA-AAAGTAA-TTGG 1117 Query 1075 GGTTATGTATTCAGCAACGAGAGAGAAGTGGTTCG-CTACGCAACCCAAATCACACCCAT 1133 | |||| |||||||||||||||| ||||| | | | ||| | ||| |||||||||||| | Sbjct 1118 GCTTATATATTCAGCAACGAGAGTGAAGTCGCT-GACTATGTAACTCAAATCACACCCTT 1176 Query 1134 TCTCTGCCTATCCATTT-TCGTTAACAGCTTTCTCGCCGTGCTCTCAGGGGTTGCCAGAG 1192 ||| |||||||| ||| | ||| |||||||||||||||| |||||||| ||||| |||| Sbjct 1177 TCTATGCCTATCAATTGGT-GTTGACAGCTTTCTCGCCGTACTCTCAGGAGTTGCTAGAG 1235 Query 1193 GATCAGGGTGGCAACGTATAGGAGGTTATGCAAGCTTAGGATCATATTATCTTGTCGGAA 1252 || |||||||||||| |||||||| |||||||| | |||||||||||||||| ||||| | Sbjct 1236 GAACAGGGTGGCAACATATAGGAGCTTATGCAAACATAGGATCATATTATCTGGTCGGGA 1295 Query 1253 TCCCGTTAGGATGGTTCTTGTGTTTTGTCATGAAATTGAGAGGGAAAGGACTTTGGATTG 1312 ||||| |||| | | |||||||||| || |||||||||||||||||||||||||||| | Sbjct 1296 TCCCGGTAGGTTCGATCTTGTGTTTCGTTGTGAAATTGAGAGGGAAAGGACTTTGGATCG 1355 Query 1313 GTATACTCATAGCCTCCACTATCCAA-CTCATTGTTTTTGCTCTTGTCACCTTCTTCACC 1371 ||||| | || | ||| ||| | ||| | |||||| ||||||||||||| ||||||||| Sbjct 1356 GTATATTGATTGGCTCTACTTTACAAACG-ATTGTTCTTGCTCTTGTCACTTTCTTCACC 1414 Query 1372 AATTGGGAACAAGA 1385 |||||||||||||| Sbjct 1415 AATTGGGAACAAGA 1428 > Ahg925891 jgi|Araly1|925891|scaffold_201452.1 Length=1524 Score = 1230 bits (666), Expect = 0.0 Identities = 1198/1450 (83%), Gaps = 56/1450 (4%) Strand=Plus/Plus Query 82 GAGATGATGAAGAAGGTGAGCTCCATGGCGGCTCCAATGGTGGCAGTTTCGGTTTCTCAA 141 ||||||||||||||||| |||| ||||| |||||||||||||| || | | |||||| Sbjct 88 GAGATGATGAAGAAGGTAAGCTTTATGGCTGCTCCAATGGTGGCTGTGGCTGCTTCTCAG 147 Query 142 TTCCTCCTTCAAGTCATCTCCATGGTTATGGCTGGTCATTTGGACGAG--CTCTCGCTCT 199 | |||||||||||| |||||||| |||||||| ||||| ||||||||| ||||| |||| Sbjct 148 TACCTCCTTCAAGTTATCTCCATTGTTATGGCCGGTCACTTGGACGAGCTCTCTCTCTCT 207 Query 200 CAGCTGTCGCAATTGCCACTTCCCTCACCAATGTCACTGGTTTCAGCCTCATCGTTGGGT 259 | || || || || || ||||| || ||||| ||||| | || |||| |||| | Sbjct 208 CCGCCGTTGCTATCGCTACTTCTCTTACCAACGTCAC------CGGCTTCAT--TTGGAT 259 Query 260 TTGCAGGTGCGTTAGACACTCTTTGCGGTCAAGCTTTTGGAGCAGAACAATTT-GGAAAA 318 | |||||||||||||| || || || |||||||||||||||||||| |||||| || ||| Sbjct 260 TGGCAGGTGCGTTAGAGACACTGTGTGGTCAAGCTTTTGGAGCAGAGCAATTTAGG-AAA 318 Query 319 ATTGGTGCATACACTTACAGCTCAATGCTCTGTCTTCTCGTT-TTCTGTTTTTCAATCT- 376 || |||||||||||||| ||||||||||| ||||||||| || || ||||| |||||| Sbjct 319 ATCGGTGCATACACTTATAGCTCAATGCTATGTCTTCTC-TTGTTTTGTTTCCCAATCTC 377 Query 377 -CTATCGTATGGTTTTTCATGGACAAGCTCTTGGAGATTTTCCATCAAGATCCTCTCATC 435 || | || ||||||| |||||||| || |||||| ||||||||||||||||||||||| Sbjct 378 ACTTTTGT-GGGTTTTT-ATGGACAAACTATTGGAGCTTTTCCATCAAGATCCTCTCATC 435 Query 436 TCTCAATTAGCTTGCAGATACTCAATCTGGCTCATACCGGCTTTATTCGGATTCACTCTT 495 ||||| ||||| || ||||| || |||||||| ||||||||||||||||||| | || || Sbjct 436 TCTCATTTAGCGTGTAGATATTCGATCTGGCTTATACCGGCTTTATTCGGATACTCTGTT 495 Query 496 CTTCAACCTATGACTCGGTATTT-CCAGTCACAAGGAATAACTCTTCCTCTCTTCGTGAG 554 |||||| |||||||||||| ||| ||||||||||||| | ||| ||||||||| |||| Sbjct 496 CTTCAATCTATGACTCGGT-TTTCCCAGTCACAAGGATTGGTTCTACCTCTCTTCTTGAG 554 Query 555 CTCTCTTGGAGCTCTTTGTTTTCACATT-CC-TTTCTGTTGGCTTCTTGTCTATAAACTG 612 |||||| |||||||| ||||||||||| || |||| | ||||||||||| ||||||||| Sbjct 555 CTCTCTCGGAGCTCTCAGTTTTCACATTCCCTTTTC-G-TGGCTTCTTGTTTATAAACTG 612 Query 613 AAATTTGGAATAGTT-GGCGCCGCTTTGTCCATCGGTTTTTCATATTGGCTCAACGTATT 671 | ||||||||| || ||| | ||||||||||| |||||||| ||||||||||||||| Sbjct 613 AGATTTGGAAT-CTTCGGCTCTGCTTTGTCCATAGGTTTTTCGTATTGGCTCAACGTAGG 671 Query 672 TTTGCTTTGGATTTTCATGAGATACTCTGCTTTGCATCGTGAAATGAAGAATCTT-GGTT 730 |||||||||| ||||||||||| | | || | || |||| |||| | ||||||| || Sbjct 672 TTTGCTTTGGGTTTTCATGAGAGATTTTGATCTGTATCGCGAAAACAGGAATCTTCGG-G 730 Query 731 TGCAAGAACTCATCTCGAGCATGAAGCAGTTCATCGCCCTCGCGATCCCCTCTGCAATGA 790 ||||||| || | | |||||||||||||||||| ||||||| || |||||||| |||| Sbjct 731 CGCAAGAAATCTTTTTGAGCATGAAGCAGTTCATTACCCTCGCAATTCCCTCTGCGATGA 790 Query 791 TGA-TATGCCTGGAATGGTGGTCGTTTGAGATTC-TACTACTAATGTCTGGACTCTTACC 848 ||| | |||||||||||||||||||||||| ||| || |||||||||| ||||||||||| Sbjct 791 TGACT-TGCCTGGAATGGTGGTCGTTTGAGCTTCTTA-TACTAATGTCCGGACTCTTACC 848 Query 849 AAACTCAAAGCTCGAAACATCGGTGAT-ATCCATTTGCCTCACAACATCGGCTGTGCATT 907 |||||||||||||||||||||||| || |||||||||||| |||| ||| || |||||| Sbjct 849 AAACTCAAAGCTCGAAACATCGGT-ATTATCCATTTGCCTAACAATGTCGTCTCTGCATT 907 Query 908 TCGTTCTGGTGAATGCGATAGGAGCATCCGCAAGCACACATGTCTCAAACGAGCTAGGAG 967 |||| | |||||||| ||||||||| |||| |||||||| ||||||||| ||||||||| Sbjct 908 ACGTTATTGTGAATGCAATAGGAGCAGCCGCGAGCACACACGTCTCAAACAAGCTAGGAG 967 Query 968 CTGGAAATCATAGGGCAGCTCGAGCCGCGGTTAATTCTGCCATTTTCCTTGGTGGTG-TT 1026 ||||||||| | |||||||||||||| | | ||||||| ||||| || | | || || Sbjct 968 CTGGAAATCCGAAGGCAGCTCGAGCCGTTGCTGATTCTGCGATTTTTCTCAGCG-TGATT 1026 Query 1027 GGTGCATTAATAACAACCATCACACTTTACAGT-TACCGAA-AAAGTTGGGGTTATGTAT 1084 | |||| ||| || |||||| || || | ||||||| ||| ||||| |||| ||| Sbjct 1027 GATGCAGCCATAGTAAGCATCACTCTCTAT-GCCTACCGAAGAAA-TTGGGCTTATATAT 1084 Query 1085 TCAGCAACGAGAGAGAAGTGGTTCG-CTACGCAACCCAAATCACACCCATTCTCTGCCTA 1143 |||| || ||||| ||||| | | | ||| | ||| |||||||||||| |||| |||||| Sbjct 1085 TCAGTAATGAGAGTGAAGTCGCT-GACTATGTAACTCAAATCACACCCTTTCTATGCCTA 1143 Query 1144 TCCATTT-TCGTTAACAGCTTTCTCGCCGTGCTCTCAGGGGTTGCCAGAGGATCAGGGTG 1202 || ||| | ||| |||||||||||||||| |||||||| ||||| |||||| ||||||| Sbjct 1144 TCAATTGGT-GTTGACAGCTTTCTCGCCGTACTCTCAGGAGTTGCTAGAGGAACAGGGTG 1202 Query 1203 GCAACGTATAGGAGGTTATGCAAGCTTAGGATCATATTATCTTGTCGGAATCCCGTTAGG 1262 ||||| |||||||| |||||||| | |||| ||||||||||| ||||| |||||| |||| Sbjct 1203 GCAACATATAGGAGCTTATGCAAACATAGGGTCATATTATCTGGTCGGTATCCCGGTAGG 1262 Query 1263 ATGGTTCTTGTGTTTTGTCATGAAATTGAGAGGGAAAGGACTTTGGATTGGTATACTCAT 1322 | | |||||||||| || |||||||||||||||||||||||||||| |||||| | || Sbjct 1263 TTCGATCTTGTGTTTCGTTGTGAAATTGAGAGGGAAAGGACTTTGGATCGGTATATTGAT 1322 Query 1323 AGCCTCCACTATCCAA-CTCATTGTTTTTGCTCTTGTCACCTTCTTCACCAATTGGGAAC 1381 | ||| ||| | ||| | |||||| ||||||||||||| ||||||||||||||||||| Sbjct 1323 TGGCTCTACTTTACAAACG-ATTGTTCTTGCTCTTGTCACTTTCTTCACCAATTGGGAAC 1381 Query 1382 AAGAGGCAACGAAAGCTAGAGACAGAGTATTCGAGATGACACCTCAAGTCAAAGGCAACC 1441 |||||||| ||| ||||||||||||||| |||||||||| ||| ||| ||||| | Sbjct 1382 AAGAGGCAGTGAAGGCTAGAGACAGAGTAACCGAGATGACA--TCA---CAA-GGCAATC 1435 Query 1442 AAAAAACACAAATTATAGTAGAAGAGGATACACAAGTTTTACTTAATC-ATAT-TGCAGA 1499 || |||| |||| ||| || |||||||| ||||| |||| |||| |||| | |||| Sbjct 1436 AAGTAACAGAAATGATATTAAAAGAGGATGTACAAGGTTTA-TTAAAAGATATCT-CAGA 1493 Query 1500 AACTGTGTAA 1509 || ||||||| Sbjct 1494 AAATGTGTAA 1503 > Ahg925784 jgi|Araly1|925784|scaffold_201345.1 Length=635 Score = 433 bits (234), Expect = 2e-120 Identities = 364/426 (85%), Gaps = 12/426 (3%) Strand=Plus/Plus Query 217 ACTTCCCTCACCAATGTCACTGGTTTCAGCCTCATCGTTGGGTTTGCAGGTGCGTTAGAC 276 ||||| || ||||| ||||| || ||||||||| || |||| || |||||||||||||| Sbjct 147 ACTTCTCTTACCAACGTCACCGGCTTCAGCCTCCTCTTTGGATTGGCAGGTGCGTTAGAG 206 Query 277 ACTCTTTGCGGTCAAGCTTTTGGAGCAGAACAATTT-GGAAAAATTGGTGCATACACTTA 335 || || || ||||||||||||||||| || |||||| || ||||| |||||||||||||| Sbjct 207 ACACTGTGTGGTCAAGCTTTTGGAGCTGAGCAATTTAGG-AAAATCGGTGCATACACTTA 265 Query 336 CAGCTCAATGCTCTGTCTTCTCGTT-TTCTGTTTTTCAATCT--CTATCGTATGGTTTTT 392 ||||||||||| ||||||||| || || ||||| |||||| || | || ||||||| Sbjct 266 TAGCTCAATGCTATGTCTTCTC-TTGTTTTGTTTCCCAATCTCACTTTTGT-GGGTTTTT 323 Query 393 CATGGACAAGCTCTTGGAGATTTTCCATCAAGATCCTCTCATCTCTCAATTAGCTTGCAG 452 |||||||| || |||||| |||||||||||||||||||||||||||| |||||||| || Sbjct 324 -ATGGACAAACTATTGGAGCTTTTCCATCAAGATCCTCTCATCTCTCATTTAGCTTGTAG 382 Query 453 ATACTCAATCTGGCTCATACCGGCTTTATTCGGATTCACTCTTCTTCAACCTATGACTCG 512 ||| || |||||||| ||||||||||||||||||| | || |||||||| |||||||||| Sbjct 383 ATATTCGATCTGGCTTATACCGGCTTTATTCGGATACTCTGTTCTTCAATCTATGACTCG 442 Query 513 GTATTTCCAGTCACAAGGAATAACTCTTCCTCTCTTCGTGAGCTCTCTTGGAGCTCTTTG 572 || |||||||||||||||| | ||| ||||||||| |||||||||| |||||||| || Sbjct 443 GTTTTTCCAGTCACAAGGATTGGTTCTACCTCTCTTCTTGAGCTCTCTCGGAGCTCTCTG 502 Query 573 TTTTCACATT-CC-TTTCTGTTGGCTTCTTGTCTATAAACTGAAATTTGGAATAGTTGGC 630 |||||||||| || |||| | |||||||||||||||||||||| ||||||||| || || Sbjct 503 TTTTCACATTCCCTTTTC-G-TGGCTTCTTGTCTATAAACTGAGATTTGGAATCGTCAGC 560 Query 631 GCCGCT 636 || ||| Sbjct 561 GCTGCT 566 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 56487833335 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5