BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G64920.1
Length=1359
Score E
Sequences producing significant alignments: (Bits) Value
Ahg907745 jgi|Araly1|907745|Al_scaffold_0002_826 1995 0.0
Ahg475492 jgi|Araly1|475492|fgenesh2_kg.2__622__AT1G64910.1 1402 0.0
Ahg950022 jgi|Araly1|950022|scaffold_801909.1 1197 0.0
Ahg489802 jgi|Araly1|489802|fgenesh2_kg.6__2936__AT2G22930.1 865 0.0
Ahg950024 jgi|Araly1|950024|scaffold_801911.1 592 3e-168
> Ahg907745 jgi|Araly1|907745|Al_scaffold_0002_826
Length=1356
Score = 1995 bits (1080), Expect = 0.0
Identities = 1260/1348 (93%), Gaps = 7/1348 (1%)
Strand=Plus/Plus
Query 1 ATGGGCCAAAAGATTCACGCTTTTATGTTCCCCTGGTTTGCTTTTGGTCATATGACTCCG 60
||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct 1 ATGGGCCAAAAGATTCATGCTTTTATGTTCCCGTGGTTTGCTTTTGGTCATATGACTCCG 60
Query 61 TACTTGCATCTAGGCAACAAGTTAGC-C--GAGAAAGGTCATAGGGTTACTTTCTTGCTA 117
||||||||||||| |||| || || | | |||||||||||||||||||||||||||||
Sbjct 61 TACTTGCATCTAGCCAAC-AG-TA-CACAACAGAAAGGTCATAGGGTTACTTTCTTGCTA 117
Query 118 CCTAAGAAAGCTCAGAAACAATTGGAACATCAGAATCTATTTCCACACGGTATCGTCTTT 177
||||||||||||||||||||||||| |||||||||||| || ||||| ||||| ||||||
Sbjct 118 CCTAAGAAAGCTCAGAAACAATTGGGACATCAGAATCTGTTCCCACATGGTATTGTCTTT 177
Query 178 CATCCTCTTGTTATTCCTCATGTTGATGGCCTCCCTGCTGGTGCCGAGACAGCCTCGGAT 237
||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 178 CATCCTCTTACTATACCTCATGTTGATGGCCTCCCTGCTGGTGCCGAGACAGCCTCGGAT 237
Query 238 ATCCCCATCTCGTTGGTGAAGTTCTTGTCTATAGCCATGGATCTTACACGCGATCAGATC 297
||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct 238 ATCCCCATCTCTTTGGTGAAGTTTTTGTCTATAGCCATGGATCTTACACGCGATCAGGTT 297
Query 298 GAAGCCGCGATTGGTGCCTTGAGACCGGACCTAATCTTGTTCGATTTAGCTCACTGGGTT 357
|||||||||||| |||||||||||| ||||| |||||||||||||||||||| ||| ||
Sbjct 298 GAAGCCGCGATTCTTGCCTTGAGACCAGACCTGATCTTGTTCGATTTAGCTCAATGGATT 357
Query 358 CCGGAAATGGCTAAAGCGCTTAAAGTCAAGAGTATGTTGTATAACGTGATGTCAGCTACC 417
|| |||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||
Sbjct 358 CCAGAAATGGCTAAAGCTCATAAAGTCAAGAGTATGTTGTACAACGTGATGTCAGCTACC 417
Query 418 TCTATAGCTCACGACCTTGTCCCAGGTGGTGAACTTGGAGTTGCTCCACCTGGTTATCCT 477
|| || |||||||||||||||||||| |||||||| |||||| |||||||||||||||||
Sbjct 418 TCCATTGCTCACGACCTTGTCCCAGGAGGTGAACTAGGAGTTCCTCCACCTGGTTATCCT 477
Query 478 TCATCAAAGGCGTTGTACCGCGAACACGATGCTCACGCCTTGTTAACCTTCTCCGGCTTC 537
||||||||||||||||||| | |||||||||||||||| ||| | |||||||||||||||
Sbjct 478 TCATCAAAGGCGTTGTACCACAAACACGATGCTCACGCATTGCTGACCTTCTCCGGCTTC 537
Query 538 TACAAGAGGTTTTATCACCGGTTCACCACAGGTCTTATGAATTGCGATTTCATTTCGATT 597
||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct 538 TACAAGAGGTTTTATCATCGGCTCACCACAGGTCTTATGAATTGCGATTTCATTTCGATT 597
Query 598 CGGACATGTGAAGAAATCGAAGGTAAATTTTGTGACTATATTGAGAGTCAATACAAGAAG 657
||||||| ||||||||||||||||||| ||||||||||| ||| |||||||| |||||
Sbjct 598 AGGACATGCAAAGAAATCGAAGGTAAATTCTGTGACTATATCGAGCGTCAATACGAGAAG 657
Query 658 AAGGTTCTTTTAACCGGTCCAATGCTTCCCGAGCCTGACAAGAGTAAACCACTTGAAGAT 717
|||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct 658 AAGGTTCTCTTAACCGGTCCAATGCTTCCTGAGCCAGACAAGAGTAAACCACTTGAAGAT 717
Query 718 CAATGGAGTCATTGGCTGAGTGGGTTTGGACAAGGCTCTGTAGTGTTCTGTGCATTGGGA 777
||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct 718 CAATGGAGTCACTGGCTGAGTGGGTTTAGACAAGGCTCTGTACTGTTCTGTGCATTGGGA 777
Query 778 AGTCAAACCATTCTAGAGAAAAACCAATTCCAAGAACTCTGTTTAGGAATAGAGCTTACG 837
|| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 778 AGCCAAACCACTCTAGAGAAAAACCAATTCCAAGAACTCTGTTTAGGAATAGAGCTTACA 837
Query 838 GGTTTACCATTTCTTGTCGCGGTTAAGCCACCAAAAGGCGCAAACACAATTCATGAAGCG 897
|||||||| |||||||||||||| ||||||||||||||| |||| |||||||| ||||||
Sbjct 838 GGTTTACCGTTTCTTGTCGCGGTAAAGCCACCAAAAGGCACAAAGACAATTCAAGAAGCG 897
Query 898 TTACCAGAAGGGTTCGAGGAAAGGGTGAAGGGTCGTGGAATAGTTTGGGGAGAATGGGTG 957
|||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct 898 TTACCAGAAGGGTTCGAGGAAAGGGTGACCGGTCGTGGAATGGTTTGGGGAGAATGGGTG 957
Query 958 CAGCAACCATCCTGGCAACCATTGATATTGGCTCATCCATCAGTAGGTTGCTTTGTGAGC 1017
|| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 958 CAACAACCATACTGGCAACCATTGATATTGGCTCATCCATCAGTAGGCTGCTTTGTGAGC 1017
Query 1018 CATTGCGGATTCGGGTCAATGTGGGAATCTTTAATGAGTGATTGTCAAATAGTCTTTATT 1077
|| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1018 CACTGCGGATTCGGGTCAATGTGGGAATCTCTAATGAGTGATTGTCAAATAGTCTTTATT 1077
Query 1078 CCAGTTTTGAATGATCAAGTTCTCACCACGAGAGTAATGACGGAGGAACTCGAGGTCTCC 1137
||||||||||||||||||||||||||||| ||| || |||| || |||||||||||||||
Sbjct 1078 CCAGTTTTGAATGATCAAGTTCTCACCACTAGATTATTGACTGAAGAACTCGAGGTCTCC 1137
Query 1138 GTTGAGGTACAGAGAGAAGAAACAGGATGGTTCTCAAAAGAAAACTTGAGTGGTGCAATC 1197
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1138 GTTGAGGTACAAAGAGAAGAAACAGGATGGTTCTCAAAAGAAAACTTGAGTGGTGCAATC 1197
Query 1198 ATGTCTTTGATGGACCAAGACAGCGAGATAGGGAACCAAGTGAGGAGGAACCATTCTAAA 1257
||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||| |||
Sbjct 1198 ATGTCTTTGATGGACAAAGATAGCGAGATAGGGAACCAAGTGAGAAGGAACCATTCCAAA 1257
Query 1258 TTGAAGGAGACTTTGGCTAGTCCTGGATTATTAACCGGTTACACCGATAAATTTGTTGAC 1317
|||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1258 TTGAAGGAAACTTTGGGTAGTCCTGGATTATTAACCGGTTACACCGATAAGTTTGTTGAC 1317
Query 1318 ACTTTGGAGAATCTAGTCAACGA-ACAA 1344
||||||| ||||||||||||||| ||||
Sbjct 1318 ACTTTGGCGAATCTAGTCAACGAGACAA 1345
> Ahg475492 jgi|Araly1|475492|fgenesh2_kg.2__622__AT1G64910.1
Length=1459
Score = 1402 bits (759), Expect = 0.0
Identities = 1164/1357 (86%), Gaps = 37/1357 (3%)
Strand=Plus/Plus
Query 1 ATGGGCCAAAAGATTCACGCTTTTATGTTCCCCTGGTTTGCTTTTGGTCATATGACTCCG 60
|||||||||||| ||||||| ||||||||||| ||||| ||||||||||||||||||||
Sbjct 61 ATGGGCCAAAAGTTTCACGCCTTTATGTTCCCTTGGTTCGCTTTTGGTCATATGACTCCA 120
Query 61 TACTTGCATCTAGGCAACAAGTTAGCCGAGAAAGGTCATAGGGTTACTTTCTTGCTACCT 120
||||||||| ||| |||||||||||| ||||||||||| || || ||||||||||| ||
Sbjct 121 TACTTGCATTTAGCCAACAAGTTAGCTGAGAAAGGTCACAGAGTCACTTTCTTGCTCCCC 180
Query 121 AAGAAAGCTCAGAAACA-ATTGGAACATCAGAATCTATTTCCACACGGTATCGTCTTTCA 179
|||||||||||||| || || ||||||| ||||| |||||| || | |||||||||||
Sbjct 181 AAGAAAGCTCAGAAGCAGCTT-GAACATCTCAATCTGTTTCCAGACAGCATCGTCTTTCA 239
Query 180 TCCTCTTGTTATTCCTCATGTTGATGGCCTCCCTGCTGGTGCCGAGACAGCCTCGGATAT 239
|||||| ||| |||||||||||||| ||||| ||||| |||||||| |||||||||
Sbjct 240 CCCTCTTACTATGCCTCATGTTGATGGTCTCCCGGCTGGAGCCGAGACTTTCTCGGATAT 299
Query 240 CCCCAT-CTCGTTGGT-GAAGTTCTTGTCTATAGCCATGGATCTTACACGCGATCAGATC 297
||| || | |||| || |||||||||| | ||| || ||||| |||||||||||| |
Sbjct 300 CCCTATGC-CGTT-GTGGAAGTTCTTGCCCCCAGCTATAGATCTCACACGCGATCAGGTA 357
Query 298 GAAGCCGCGATTGGTGCCTTGAGACCGGACCTAATCTTGTTCGAT-TTAGC-TCACTGGG 355
||||||||| || |||||||||||||||||| || ||||||||| || || ||| ||||
Sbjct 358 GAAGCCGCGGTTCATGCCTTGAGACCGGACCTGATATTGTTCGATCTT-GCTTCA-TGGG 415
Query 356 TTCCGGAAATGGCTAAAGCGCT-TAAAGTCAAGAGTATGTTGTATAACGTGATGTCAGCT 414
|||| ||||||||||||| | | || |||||||||||||||||| ||| | || ||||||
Sbjct 416 TTCCAGAAATGGCTAAAGAG-TATAGAGTCAAGAGTATGTTGTACAACATCATATCAGCT 474
Query 415 ACCTCTATAGCTCACGACCTTGTCCCAGGTGGTGAACTTGGAGTTGCTCCACCTGGTTAT 474
|| ||||||||||| ||| ||||||||||||||||||| |||||| ||||||||||||||
Sbjct 475 ACATCTATAGCTCATGACTTTGTCCCAGGTGGTGAACTAGGAGTTCCTCCACCTGGTTAT 534
Query 475 CCTTCATCAAAGGCGTTGTACCGCGA-ACACGATGCTCACGCCTTGTTAACCTTCTCCGG 533
|| ||||||||| |||||||||| | ||||||||||||||||||||| ||||||||||
Sbjct 535 CCATCATCAAAGTTGTTGTACCGC-AGACACGATGCTCACGCCTTGTTGACCTTCTCCGT 593
Query 534 CTTCTACAAGAGGTTTTATCACCGGTTCACCACAGGTCTTATGAATTGCGATTTCATTTC 593
|| |||||||||||||| ||| || ||| |||||||||||||||||| |||||||||||
Sbjct 594 CTACTACAAGAGGTTTTCTCAGAGGCTCATCACAGGTCTTATGAATTGTGATTTCATTTC 653
Query 594 GATTCGGACATGTGAAGAAATCGAAGGTAAATTTTGTGACTATATTGAGAGTCAATACAA 653
|| ||||||||| |||||||||| |||||||| || || ||||||||| |||||||| |
Sbjct 654 AATCCGGACATGTAAAGAAATCGAGGGTAAATTCTGCGAGTATATTGAGCGTCAATACCA 713
Query 654 GAAGAAGGTTCTT-TTAACCGGTCCAATGCTTCCCGAGCCT-GACAAGAGTAAACCACTT 711
|| |||||| || || || |||||||||||||| | | || || || ||||||||||||
Sbjct 714 TAAAAAGGTT-TTCTTGACAGGTCCAATGCTTCCTGTG-CTAGAAAAAAGTAAACCACTT 771
Query 712 GAAGATCAATGGAGTCATTGGCTGAGTGGGTTTGGACAAGGCT-CTGTAGTGTTCTGTGC 770
||||||| ||||||||||||||||| |||||||||||||||| | ||||||||||||||
Sbjct 772 GAAGATCGATGGAGTCATTGGCTGAACGGGTTTGGACAAGGCTAC-GTAGTGTTCTGTGC 830
Query 771 ATTGGGAAGTCAAACCAT-TCTAGAGAAAAACCAATTCCAAGAACTCTGTTTAGGAATAG 829
|||||||||||||| | | |||||||||| |||||||||||||||| |||||||||||||
Sbjct 831 ATTGGGAAGTCAAATC-TCTCTAGAGAAAGACCAATTCCAAGAACTTTGTTTAGGAATAG 889
Query 830 AGCTTACGGGTTTACCATTTCTTGTCGCGGTTAAG-CCACCAAAAGGCGCAAACACAATT 888
| ||||| |||||||| |||||||| ||||| || ||||||||||||||||| || |||
Sbjct 890 AACTTACAGGTTTACCGTTTCTTGTAGCGGT-AACTCCACCAAAAGGCGCAAAGACGATT 948
Query 889 CATGAAGCGTTACCAGAAGGGTTCGAGGAAAGGGTGAAGGGTCGTGGAATAGTTTGGGGA 948
|| |||||||||||||||||||||||||| ||||| || | ||||||| | |||||||||
Sbjct 949 CAAGAAGCGTTACCAGAAGGGTTCGAGGAGAGGGTAAAAGATCGTGGAGTGGTTTGGGGA 1008
Query 949 GAATGGGTGCAGCAACCATCCTGGCAACCATTGATATTGGCTCATCCATCAGTAGGTTGC 1008
||||||||||| ||||||| | || | || | |||||||||||||||||| ||
Sbjct 1009 GAATGGGTGCAACAACCAT--T---AA---T--AT-T-GGCTCATCCATCAGTAGGCTGT 1056
Query 1009 TTTGTGAGCCATTGCGGATTCGGGTCAATGTGGGAATCTTTAATGAGTGATTGTCAAATA 1068
||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||
Sbjct 1057 TTTGTGAGCCATTGCGGATTCGGGTCAATGTGGGAATCTCTAATGGGTGATTGCCAAATA 1116
Query 1069 GTCTTTATTCCAGTTTTGAATGATCAAGTTCTCACCACGAGAGTAATGACGGAGGAACTC 1128
||||| ||||| ||||| |||||||||||||| ||| ||| | ||||| || ||||||
Sbjct 1117 GTCTTGCTTCCATTTTTGGCTGATCAAGTTCTCAACACAAGATTGATGACCGAAGAACTC 1176
Query 1129 GAGGTCTCCGTTGAGGTACAGAGAGAAGAAACAGGATGGTTCTCAAAAGAAAACTTGAGT 1188
||||| || ||||| || || ||||||||||||||||||||||| || || | |||||||
Sbjct 1177 GAGGTTTCGGTTGAAGTGCAAAGAGAAGAAACAGGATGGTTCTCGAAGGAGAGCTTGAGT 1236
Query 1189 GGTGCAATCATGTCTTTGATGGACCAAGACAGCGAGATAGGGAACCAAGTGAGGAGGAAC 1248
| ||| |||| ||| |||||||||||| |||||||| ||||| | ||||||||||||
Sbjct 1237 GTTGCGATCACATCTGTGATGGACCAAGGTAGCGAGATCGGGAATCTGGTGAGGAGGAAC 1296
Query 1249 CATTCTAAATTGAAGGAGACTTTGGCTAGTCCTGGATTATTAACCGGTTACACCGATAAA 1308
|| || |||||||||||| ||| | |||| ||||||||| |||||||| |||||||||
Sbjct 1297 CACTCCAAATTGAAGGAGGTTTTTGTTAGTGATGGATTATTGACCGGTTATACCGATAAA 1356
Query 1309 TTTGTTGACACTTTGGAGAATCTAGTCAACGA-ACAA 1344
||||||||||| |||||||||||||||| ||| ||||
Sbjct 1357 TTTGTTGACACATTGGAGAATCTAGTCAGCGATACAA 1393
> Ahg950022 jgi|Araly1|950022|scaffold_801909.1
Length=1384
Score = 1197 bits (648), Expect = 0.0
Identities = 1130/1360 (83%), Gaps = 43/1360 (3%)
Strand=Plus/Plus
Query 1 ATGGGCCAAAAGATTCACGCTTTTATGTTCCCCTGGTTTGCTTTTGGTCATATGACTCCG 60
|||||||||||| ||||||||||||||||||| ||||| |||| ||||||||||||||||
Sbjct 21 ATGGGCCAAAAGTTTCACGCTTTTATGTTCCCATGGTTCGCTTATGGTCATATGACTCCG 80
Query 61 TACTTGCATCTAGGCAACAAGTTAGCCGAGAAAGGTCATAGGGTTACTTTCTTGCTACCT 120
||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||| |||
Sbjct 81 TACTTGCATCTAGCCAACAAGCTAGCTGAGAAAGGTCATAGGGTTACTTTCTTGCTGCCT 140
Query 121 AAGAAAGCTCAGAAACAATTGGAACATCAGAATCTATTTCCACACGGTATCGTCTTTCAT 180
||||||||||| ||||| ||||||||||| ||||| |||||| || | ||||||||| ||
Sbjct 141 AAGAAAGCTCAAAAACAGTTGGAACATCACAATCTGTTTCCAGACAGCATCGTCTTTTAT 200
Query 181 CCTCTTGTTATTCCTCATGTTGATGGCCTCCCTGCTGGTGCCGAGACAGCCTCGGATATC 240
|||||| |||||||||||||||||| ||||||| ||| |||||||| ||||||||||||
Sbjct 201 CCTCTTACTATTCCTCATGTTGATGGTCTCCCTGATGGCGCCGAGACCGCCTCGGATATC 260
Query 241 CCCATCTCGTTGGTGAAGTT-CTTGTCTATAGCCATGGATCTTACACGCGATCAGATCGA 299
||||||||||||| |||||| || | | |||||||||||| |||||||||||| ||||
Sbjct 261 CCCATCTCGTTGGGGAAGTTTCT-GACCGCAGCCATGGATCTCACACGCGATCAGGTCGA 319
Query 300 AGCCGCGATTGGTGCCTTGAGACCGGACCTAATCTTGTTCGATTTAGCTCACTGGGTTCC 359
||||||| || |||| || | ||| ||||| || || || ||||| ||| | ||||||||
Sbjct 320 AGCCGCGGTTCGTGCTTTAAAACCAGACCTGATATTTTTTGATTTTGCTTATTGGGTTCC 379
Query 360 GGAAATGGCTAAAGCGCTTAAAGTCAAGAGTATGTTGTA-TAACGTGATGTCAGCTACCT 418
||||||||| | || | ||| ||||||||| || | || | ||| | || |||| ||
Sbjct 380 GGAAATGGCGAGAGAACATAACGTCAAGAGTGTGCTCTACTTT-GTGGTATCGGCTAACT 438
Query 419 CTATAGCTCACGACCTTGTCCCAGGTGGTGAACTT-GGAGTTGCTCCACCTGGTTATCCT 477
| |||||||| || |||||||||||||||||| || |||||| |||||||||||||||||
Sbjct 439 CCATAGCTCATGAACTTGTCCCAGGTGGTGAA-TTAGGAGTTCCTCCACCTGGTTATCCT 497
Query 478 TC-ATCAAAGGCGTTGTACCGCGAACACGATGCTCACGCCTTGTTAACCTTCT-CCGGCT 535
|| | |||| | ||||||||| | ||||||||||||||| ||||| || || | || ||
Sbjct 498 TCGA-CAAAAGTGTTGTACCGTGGACACGATGCTCACGCTTTGTTGACTTT-TGCCATCT 555
Query 536 TCTACAAGAGGTTTTATCACCGGTTCACCACAGGTCTTATGAATTGCGATTTCATTTCGA 595
||||| ||||| || || ||||| | || |||||||| | |||||| ||||| || || |
Sbjct 556 TCTACGAGAGGCTTCATTACCGGATAACAACAGGTCTAAAGAATTGTGATTTTATCTCAA 615
Query 596 TTCGGACATGTGAAGAAATCGAAGGTAAATTTTGTGACTATATTGAGA-GTCAATACAAG 654
|| |||| ||| ||||| | ||||||||||| || |||||||| |||| | |||||| ||
Sbjct 616 TTAGGACTTGTAAAGAAGTTGAAGGTAAATTCTGCGACTATATCGAGAAG-CAATACCAG 674
Query 655 AAGAAGGTTCTTTTAACCGGTCCAATGCTTCCCGAGCCTGACAAGAGTAAACCACTTGAA 714
| |||||||||||| || |||||||||||||| ||||| ||||| |||| ||||||||||
Sbjct 675 AGGAAGGTTCTTTTGACAGGTCCAATGCTTCCAGAGCCAGACAACAGTAGACCACTTGAA 734
Query 715 GATCAATGG-AGTCATTGGCTGAGTGGGTTTGGA-CAAGGCTCTGTAGTGT-TCTGTGCA 771
|||| |||| | ||||||||| | | ||| || | || || ||| | | | ||||||
Sbjct 735 GATCGATGGGA-TCATTGGCTAAATCA-TTTCGAACCCGGTTCGGTAATATAT-TGTGCA 791
Query 772 TTGGGAAGTCAAACCA-TTCTAGAGAAAAACCAATTCCAAGAACTCTGTTTAGGAATAGA 830
||||||||||||| || || ||||||| | |||||||||||||||||||||||||| ||
Sbjct 792 TTGGGAAGTCAAATCACTT-TAGAGAAGGATCAATTCCAAGAACTCTGTTTAGGAATGGA 850
Query 831 GCTTACGGGTTTACCATTTCTTGTCGCGGTTAAGCCACCAAAAGGCGCAAACACAATTCA 890
||| || |||||||| |||||||| ||||| |||||||||||||||||||| || || ||
Sbjct 851 GCTCACTGGTTTACCGTTTCTTGTAGCGGTAAAGCCACCAAAAGGCGCAAAGACGATCCA 910
Query 891 TGAAGCGTTACCAGAAGGGTTCGAGGAAAGGGTGAAGGGTCGTGGAATAGTTTGGGGAGA 950
|||||||| ||||||||||| | ||| ||||||||| || |||| | |||||||||||
Sbjct 911 AGAAGCGTTGCCAGAAGGGTTTGCGGAGAGGGTGAAGAATCATGGAGTGGTTTGGGGAGA 970
Query 951 ATGGGTGCAGCAACCATCCTGGCAACCATTGATATTGGCTCATCCATCAGTAGGTTGCTT 1010
||||||||||||||||| || | | || | |||||||||||||||||| |||||
Sbjct 971 ATGGGTGCAGCAACCAT--TG--A----T--AT-T-GGCTCATCCATCAGTAGGATGCTT 1018
Query 1011 TGTGAGCCATTGCGGATTCGGGTCAATGTGGGAATCTTTAATGAGTGATTGTCAAATAGT 1070
||||| ||||| || || || ||||||||||| ||| || |||||||||| ||||||||
Sbjct 1019 TGTGAATCATTGTGGGTTTGGATCAATGTGGGAGTCTCTAGTGAGTGATTGCCAAATAGT 1078
Query 1071 CTTTATTCCAGT-TTTGAATGATCAAGTTCTCACCACGAGAGTAATGACG-GAGGAACTC 1128
|| ||||| | |||| |||||||||||||| ||| ||| | |||| | ||||||||
Sbjct 1079 ATTGCTTCCA-TATTTGTGTGATCAAGTTCTCAACACTAGATTGATGA-GTGAGGAACTT 1136
Query 1129 GAGGTCTCCGTTGAGGTACAGAGAGAAGAAACAGGATGGTTCTCAAAAGAAAACTTGA-G 1187
||||| || || || || | ||||||||||||||||||||||| ||||| | ||| | |
Sbjct 1137 GAGGTTTCTGTGGAAGTGGAAAGAGAAGAAACAGGATGGTTCTCGAAAGAGAGCTT-ATG 1195
Query 1188 TGGTGCAATCATGTCTTTG-A-TGGACCAAGACAGCGAGATAGGGAACCAAGTGAGGAGG 1245
|| ||| |||| ||| | | ||||| |||| || ||| ||||||| | ||||||| |
Sbjct 1196 TGTTGCGATCAC--CTTGGTAATGGACAAAGATAGTGAGTTAGGGAATCTGGTGAGGACG 1253
Query 1246 AACCATTCTAAATTGAAGGAGACTTTGGCTAGTCCTGGATTATTAACCGGTTACACCGAT 1305
||||| |||||||||| ||| |||||| ||||| |||||||||||||| ||||||||||
Sbjct 1254 AACCACGCTAAATTGAAAGAGGCTTTGGTTAGTCATGGATTATTAACCGATTACACCGAT 1313
Query 1306 AAATTTGTTGACACTTTGGAGAATCTAGTCAACGA-ACAA 1344
||||||||||| |||||| || ||||||||||||| ||||
Sbjct 1314 AAATTTGTTGAAACTTTGCAGGATCTAGTCAACGATACAA 1353
> Ahg489802 jgi|Araly1|489802|fgenesh2_kg.6__2936__AT2G22930.1
Length=1405
Score = 865 bits (468), Expect = 0.0
Identities = 1054/1331 (79%), Gaps = 64/1331 (5%)
Strand=Plus/Plus
Query 9 AAAGATT-CACGCTTTTATGTTCCCCTGGTTTGCTTTTGGTCATATGACTCCGTA-CTTG 66
|||| || || ||||||||||||||||||||||||||||||||||||| ||| | ||
Sbjct 85 AAAG-TTCCATGCTTTTATGTTCCCCTGGTTTGCTTTTGGTCATATGATTCCTTTTCTA- 142
Query 67 CATCTAGGCAA-CAAGTTAGCCGAGAAAGGTCATAGGGTTACTTTCTTGCTACCTAAGAA 125
||||| | ||| ||| |||| |||||||||||| |||||||||||||||||||||||||
Sbjct 143 CATCTTG-CAAACAAACTAGCTGAGAAAGGTCATCGGGTTACTTTCTTGCTACCTAAGAA 201
Query 126 AGCTCAGAAACAATTGGAACATCAGAATCTA-TTTCCACACGGTATCGTCTTTCATCCTC 184
|||||| ||||| ||||||||||| || || ||||| || |||| |||||||| ||||
Sbjct 202 AGCTCAAAAACAGTTGGAACATCACAA-CTTGTTTCCGGACAGTATTGTCTTTCACCCTC 260
Query 185 TTGTTATTCCTCATGTTGATGGCCTCCCTGCTGGTGCCGAGACAGCCTCGGATATCCCCA 244
| || |||| ||| ||||||||||||||||||| |||||| ||||||||||||| |
Sbjct 261 TCACAATACCTCCTGTCAATGGCCTCCCTGCTGGTGCGGAGACAACCTCGGATATCCCAA 320
Query 245 TCTCGTTGGTGAAGTTCTTGTCT-ATAGCCAT-GGATCTTACACGCGATCAGATCGAAGC 302
|||| ||| || |||||||| | ||| || |||||| || | ||||||| | |||||
Sbjct 321 TCTCAATGGACAACTTCTTGTCCGA-AGC-ATTGGATCTCACTCACGATCAGGTTGAAGC 378
Query 303 CGCGATTGGTGCCTTGAGACCGGACCTAATCTTGTTCGATTTAGCTCACTGGGTTCCGGA 362
||| || |||| |||||||||||| | ||||| || ||||| ||||| |||||||| ||
Sbjct 379 TGCGGTTCGTGCTTTGAGACCGGACTTGATCTTCTTTGATTTTGCTCAATGGGTTCCAGA 438
Query 363 AATGGCTAAAGCGCTTAA-AGTCAAGAGTATGTTGTATAACGTGAT-GT--CAGCTACCT 418
||||||||||| || || | |||||||| || || || | | || || | |||||
Sbjct 439 AATGGCTAAAGAGCATATGA-TCAAGAGTGTGA-GT-TA-CATCATAGTATCTGCTACAA 494
Query 419 CTATAGCTCACGAC-CTTGTCCCAGGTGGTGAACTT-GGAGTTGCTCCACCTGGTTATCC 476
|||||||||| || | |||||| |||||| || || || ||| ||||| | |||||||
Sbjct 495 CTATAGCTCAT-ACACATGTCCCTGGTGGTAAA-TTAGGTGTTCCTCCATCAAGTTATCC 552
Query 477 TTCATCAAAGGCGTTGTACCGCGAACACGATGCTCACGCCTT-GTTAACCTTCTCCGG-C 534
|||||| |||| ||||| ||| ||| |||||||||| ||||| | |||||| || | |
Sbjct 553 TTCATCGAAGGTGTTGTTCCGTGAAAACGATGCTCATGCCTTAGC-AACCTTGTC-GATC 610
Query 535 TTCTACAAGAGGTTTTATCACCGGTTCACCACAGGTCTTATGAATTGCGATTTCATTTCG 594
|| |||||||| ||||||| | | |||| ||| |||||| ||| || ||| ||||| |
Sbjct 611 TTTTACAAGAGACTTTATCATCAGCTCACTACAAGTCTTAAGAACTGTGATGTCATTGCA 670
Query 595 ATTCGGACATGTGAAGAAATCGAAGGTAAATTTTGTGACTATAT-TGAGAGTCAATACAA 653
|| |||| || ||||||| |||||||| || || |||||||| | | |||||||| |
Sbjct 671 ATGAGGACCTGCAAAGAAATAGAAGGTAAGTTCTGCGACTATATATC-GCGTCAATACCA 729
Query 654 GAAGAAGGTTCTTTTAACCGGTCCAATGCTTCCC-GAGCCTGACA-AGAGTAAACCACTT 711
||||||||||| || || ||||||||| ||||| ||||| |||| | | |||||||||
Sbjct 730 TAAGAAGGTTCTCTTGACTGGTCCAATG-TTCCCTGAGCCAGACACA-ACTAAACCACTA 787
Query 712 GAAGATCAATGGAGTCATTGGCTGAGTGGGTTTG-GAC-AAGGCTCTGTAGTGTTCTGTG 769
||||| || |||||||||| || || || || | | ||| || |||||||| |||
Sbjct 788 GAAGAACACTGGAGTCATTTTCTAAGCGGATTCACGCCGAAG--TCAGTAGTGTTTTGTT 845
Query 770 CATTGGGAAGTCAAACCATTCTAGAGAAAA-ACCAATTCCAAGAACTCTGTTTAGGAATA 828
|||| || || |||| |||||| || |||| | ||||||||||||||||||||||| ||
Sbjct 846 CATTTGGCAGCCAAATCATTCTTGA-AAAAGATCAATTCCAAGAACTCTGTTTAGGGATG 904
Query 829 GAGCTTACGGGTTTACCATTTCTTGTCGCGGTTAAGCCACCAAAAGGCGCAAACA-CAAT 887
||||| || |||||||| |||||||| |||||||||||||||| ||| || || | |
Sbjct 905 GAGCTGACAGGTTTACCGTTTCTTGTAGCGGTTAAGCCACCAAGAGGATCAT-CAACGGT 963
Query 888 TCATGAAGCGTTACCAGAAGGGTTCGAGGAAAGGGTGAAGGGTCGTGGAATAGTTTGGGG 947
|| |||| ||||||| ||||||||||||| | || || |||||||| | ||||||||
Sbjct 964 CCAAGAAGGGTTACCACAAGGGTTCGAGGAGCGAGTAAAAGGTCGTGGTGTGGTTTGGGG 1023
Query 948 AGAATGGGTGCAGCAACCATCCTGGCAACCATTGATATTGGCTCATCCATCAGTAGGTTG 1007
|| ||||| | |||| | | |||||||||||||||||||||||| |||||||
Sbjct 1024 AGGGTGGGT--A-CAAC-A-------A-CCATTGATATTGGCTCATCCATCAATAGGTTG 1071
Query 1008 CTTTGTGAGCCATTGCGGATTCGGGT-CAATGTGGGAATCTTTAATGAGTGATTGTCAAA 1066
|||||||| |||||| || | | || |||| ||||| ||||| |||||||||| ||||
Sbjct 1072 CTTTGTGAACCATTGTGG-TCCCGGAACAATATGGGAGTCTTTGGTGAGTGATTGCCAAA 1130
Query 1067 TAGTCTTT-ATTCCAGTTTTGAA-TGATCAAGTTCTCACCACGAGAGTAATGACGGAGGA 1124
| || ||| |||||| |||| || ||||||||||||| ||| ||| | ||||| |||||
Sbjct 1131 TGGT-TTTGATTCCATTTTT-AAGTGATCAAGTTCTCTTCACAAGATTGATGACCGAGGA 1188
Query 1125 ACTCGAGGTCTCCGTTGA-G-GTACAGAGAGAAGAAACAGGATGGTTCTCAAAAGAAAAC 1182
| |||||||||| || || | ||| || || || ||||||||||||| ||||| || | |
Sbjct 1189 ATTCGAGGTCTCTGTAGAAGTGTATAGGGA-AA-AAACAGGATGGTTTTCAAAGGAGAGC 1246
Query 1183 TTGAGTGGTGCAATCATGTCTTTGATGGACCAAGACAGCGAGATAGGGAACCAAGTGAGG 1242
||||| ||| |||| |||| ||||||| |||| || || | ||||| | |||||||
Sbjct 1247 TTGAGCAATGCGATCAAGTCTGTGATGGATAAAGAAAGTGACCTCGGGAAGCTAGTGAGG 1306
Query 1243 AGGAACCATTCTAAATTGAAGGAGACTTTGGCTAGTCCTGGATTATTAACCGGTTACACC 1302
|| ||||| | ||||||||||||| ||||| ||||||||||||||| ||| |||||
Sbjct 1307 AGTAACCACACCAAATTGAAGGAGATTTTGGTTAGTCCTGGATTATTGACCAGTTACGTG 1366
Query 1303 GATAAATTTGT 1313
||||| |||||
Sbjct 1367 GATAACTTTGT 1377
> Ahg950024 jgi|Araly1|950024|scaffold_801911.1
Length=1381
Score = 592 bits (320), Expect = 3e-168
Identities = 1011/1330 (76%), Gaps = 105/1330 (8%)
Strand=Plus/Plus
Query 9 AAAGATTCACGCTTTTATGTTCCCCTGGTTTGCTTTTGGTCATATGACTCCGTACTTGCA 68
|||| |||| |||||||||||||| ||||| ||||||||||| |||||| | | |||||
Sbjct 29 AAAGTTTCATGCTTTTATGTTCCCTTGGTTCGCTTTTGGTCACATGACTGCATTTTTGCA 88
Query 69 TCTAGGC-AACAAGTTAGCCGAGAAAGGTCATAGGGTTACTTTCTTGCTACCTAAGAAAG 127
||| ||| ||||| |||| ||||||||||| | | ||||||||||| || |||||||
Sbjct 89 TCT-GGCTAACAAACTAGCTGAGAAAGGTCACAAAATAACTTTCTTGCTCCCCAAGAAAG 147
Query 128 C-TCAGAAACAA-TTGGAACATCAGAATCTATTTCCACACGGTATCGTCTTTCATC-CTC 184
| | ||| ||| || |||| || ||||| || |||||| | ||||||||||| | |||
Sbjct 148 CAT-TGAAGCAACTT-GAACCTCTCAATCTCTTCCCACACTGCATCGTCTTTCA-CACTC 204
Query 185 TTGTTATTCC-TCATGTTGATGGCCTCCCTGCTGGTGCCGAGACAGCCTCGGATATCCCC 243
|| || || || ||| ||||||||||||||||| || |||||| |||||||||||||
Sbjct 205 TTACCATCCCTTC-TGTCGATGGCCTCCCTGCTGGCGCGGAGACAACCTCGGATATCCCG 263
Query 244 ATCTCGTT-GGTGAAG--TTCTTGTCTATAGCCATGGATCTTACACGCGATC-AGATCGA 299
||||| || || | || |||| | || || ||||||| ||||| ||| || ||||
Sbjct 264 ATCTCCTTAGG-G-AGTTTTCTCGCCT-CGGCTATGGATCGGACACGAAATCAAG-TCGA 319
Query 300 AGCCGC-GATT-GGTGCCTTGAGACCGGACCTAATCTTGTTCGATTTAGCTCACTGGGTT 357
|| || | || | | | | |||||| | || || || ||||| ||||||||| ||
Sbjct 320 AGAAGCGGTTTCAAT-ACGTCA-ACCGGATATGATTTTCTTTGATTTTGCTCACTGGATT 377
Query 358 CCGGAAATGGCTAAAGCGCT-TAAAGTCAAGAGTATG--TTGT-ATAACGTGATGTCAGC 413
|||||||| |||| || | | | || ||||||| || || | ||||| ||| || ||
Sbjct 378 CCGGAAATAGCTAGAGAG-TATGGAGCCAAGAGTGTGAATT-TCATAAC--GATTTCTGC 433
Query 414 TA-CCTCTATAGCTCA-CGACCTT-GTCCCAGG-TG--GT---GA--ACTT-GG-AGTTG 460
| | | | ||||| | | | || ||||| || || || || |||| || | ||
Sbjct 434 -AGCATGTGTAGCT-ATC-TCATTCGTCCCTGGTTGTAGTCAAGATGACTTGGGTA-TTC 489
Query 461 CTCCACCTGGTTATCCTTCATCAAAGGCGTTG-TACCGCGAACACGATGCTC-AC-GCCT 517
||||||| || |||||||| || |||| |||| | || | ||| || | | || | |
Sbjct 490 CTCCACCGGGATATCCTTCGTCGAAGGTGTTGCT-TCGTGGACAAGAAAC-CAACAG-TT 546
Query 518 TGT--TAACCT-T-C--TCCGGCTT----CTACAA-GAGGTTTTATC-ACCGGTTCACCA 565
||| | ||| | | ||| | || | || | |||||| | | ||| ||| |
Sbjct 547 TGTCGT-TCCTCTCCTATCC-GTTTGGAGATGGAACTACGTTTTA-CGAACGGATCATGA 603
Query 566 CAGGTCTTATGAATTGCGATTTCATTTCGATTCGGACATGTGAAGAAATCGAAGGTAAAT 625
||| |||| || || ||| |||||||||| ||||||| ||||||| ||||| ||||
Sbjct 604 TAGGACTTAAAAACTGTGATGTCATTTCGATAAGGACATGCCAAGAAATAGAAGGAAAAT 663
Query 626 TTTGTGACTATATTGAGAGTCAA-TAC-AAGAAGAAGGTTCTTTTAACCGGTCCAATGCT 683
| || || || || || || ||| | | ||| |||| |||||||| || |||||||||||
Sbjct 664 TCTGCGATTACATCGAAAGACAATTTCAAAG-AGAA-GTTCTTTTGACGGGTCCAATGCT 721
Query 684 TCCCGAGCCTGACAAGAGTAAACCACTTGAAGATCAATGGAGTCAT-TGGCTGAGTGGGT 742
||| || || ||| |||||||| || |||||||||||| ||| | |||||||| ||
Sbjct 722 TCCTGATCCAGAC---AGTAAACCGCTAGAAGATCAATGGCGTC-TCTGGCTGAGCCAGT 777
Query 743 TTGGACAAGGCTCTGTAGTGT-TCTGTGCATTGGGAAGTCAAACCATTCTAGAGAAAA-- 799
| | || || || ||| | | | |||||||||||||| |||| |||||| | |||||
Sbjct 778 TCGAACCAGAATCAGTAATATAT-TGTGCATTGGGAAGCCAAATCATTCT-G-GAAAAGG 834
Query 800 ACCAATTCCAAGAACTCTGTTTAGGAATAGAGCTTACGGGTTTACCATTTCTTGTCGCGG 859
| |||||||||||||||||||||||||| ||||| || |||||||||||||| || ||||
Sbjct 835 ATCAATTCCAAGAACTCTGTTTAGGAATGGAGCTCACTGGTTTACCATTTCTCGTAGCGG 894
Query 860 TTAAGCCACCAAAAGGCGCAAACACAATTCATGAAGCGTTACCAG-AAGGGTTCGAGGAA 918
| || ||||||||||||||||| || || || ||||| ||||| | |||||||||| ||
Sbjct 895 TAAAACCACCAAAAGGCGCAAAGACGATCCAAGAAGCCTTACC-GAAAGGGTTCGAAGAG 953
Query 919 AGGGTGAAGGGTCGTGGAATAGTTTGGGGAGAATGGGTGCAGCAACCATCCTGGCAACCA 978
|||| ||||| |||||| | |||||||||| |||||| | | | |||||||
Sbjct 954 CGGGTTAAGGGGCGTGGAGTGGTTTGGGGAGGATGGGT---G--A--A-----GCAACCA 1001
Query 979 TTGATATTGGCTCATCCATCAGTAGGTTGCTTTGTGAGCCATTGCGGATTCGGGTCAATG 1038
||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||
Sbjct 1002 TTGATATTGGCTCATCCATCAATAGGCTGCTTTGTGAGCCATTGCGGTTTCGGGTCAATG 1061
Query 1039 TGGGAATCTTTAATGAGTGATTGTCAAATAGTCTTTATTCCAGTTTTGAATGATCAAGT- 1097
||||| || || ||| ||| || |||||||| ||||||||| |||| ||| ||| |
Sbjct 1062 TGGGAGGCTATAGTGAATGACTGCCAAATAGTGTTTATTCCACATTTGGGTGAGCAAATA 1121
Query 1098 TCTCACCACGAGAGTAATGA-CGGAGGAACTCGAGGTCTCCGTTGAGGT-ACAGAGAGAA 1155
| | | ||| ||| | |||| || |||||||||||||||| || ||||| | | |||||
Sbjct 1122 T-TAAACACCAGACTGATGAGCG-AGGAACTCGAGGTCTCGGTAGAGGTGAAA-AGAGA- 1177
Query 1156 GAAA-CAGGATGGTTCTCAAAAGAAAACTTGAGTGGTGCAATCATGTCTTTGATGGACCA 1214
|||| | |||||||| ||||| || | |||||| || || | | |||| |||||||| |
Sbjct 1178 GAAAGCTGGATGGTTTTCAAAGGAGAGCTTGAGCGGCGCGGTTAGGTCTGTGATGGACAA 1237
Query 1215 AGACAGCGAGATAGGGAACCAAGTGAGGAGGAACCATTCTAAATTGAAGGAGACTTTGGC 1274
||| |||||| ||||||||| |||||||||||||||| |||||| ||| ||| || | |
Sbjct 1238 AGATAGCGAGCTAGGGAACCTAGTGAGGAGGAACCATGCTAAATGGAAAGAGTCTCTAGT 1297
Query 1275 TAGTCCTGGA 1284
|||| |||||
Sbjct 1298 TAGTACTGGA 1307
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 50855971278
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5