BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G64960.1 Length=3767 Score E Sequences producing significant alignments: (Bits) Value Ahg475499 jgi|Araly1|475499|fgenesh2_kg.2__629__AT1G64960.1 5446 0.0 Ahg475500 jgi|Araly1|475500|fgenesh2_kg.2__630__AT1G64970.1 115 2e-24 > Ahg475499 jgi|Araly1|475499|fgenesh2_kg.2__629__AT1G64960.1 Length=3747 Score = 5446 bits (2949), Expect = 0.0 Identities = 3514/3783 (93%), Gaps = 53/3783 (1%) Strand=Plus/Plus Query 1 ATGGAGAAAAGGCTCCGGTCATCTCTCAAGACATCCTCCGAAGAATTCCTCTCATCCGCC 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| Sbjct 1 ATGGAGAAAAGGCTCCGGTCATCTCTCAAGACATCCGCCGAAGAATTCCTCTCCTCCGCC 60 Query 61 GTCAAATTAACCCTTAAATCCTCAAAACCCTCACTAAAAACCATCATCAACGCCGTCAAA 120 |||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||| Sbjct 61 GTCAAATTAACCCTAAAATCCTCTAAACCCTCACTAAAAACCATCATCTACGCCGTCAAA 120 Query 121 CCTTCCTCTGACCTCTCATCTTCTCTCCCACTCGCTCTTCACAACTCCATCCTCCACCAC 180 || || || ||||||||||||||||||||||||||||||| |||||||||| |||| || Sbjct 121 CCCTCGTCGGACCTCTCATCTTCTCTCCCACTCGCTCTTCTCAACTCCATCATCCAAAAC 180 Query 181 ACAGAATCCTTCCAAAAACTC-CTCGACGAAGTTAATAACAACAATACCTATATCCCTTC 239 ||||| ||||||||||||||| | || ||||| || | |||||| ||||| ||||||| Sbjct 181 ACAGAGTCCTTCCAAAAACTCGC-CGGCGAAG---ATGATAACAATCCCTATGTCCCTTC 236 Query 240 TCCTTCCAATTCGCCTCCAACGAAACGACACCGTGGTACCACCGGAACCTCACCAGATTC 299 ||||||||||||||||||||||||||| ||||| ||| |||||||| | ||| ||||| Sbjct 237 TCCTTCCAATTCGCCTCCAACGAAACGCCACCGCGGT---ACCGGAACTTTACCCGATTC 293 Query 300 GGATTTGGATCAACGTAAGCATCAGATCCTTGCTTCTCTTCAGATTCTCTCTTATGTTCT 359 |||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||| | Sbjct 294 GGATTTGGATCAGCGTAAGCTTCAGATCCTTGCTTCTCTTCAGATTCTCTCTCATGTTGT 353 Query 360 TCATTTATGTCTTTTAAATCCGAAGAATGCGTTTCCTACTTCCGATTTACTTCCCGCTGC 419 ||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||| Sbjct 354 TCATTTATGTCTTTTAAGTCCGAAGAAAGCGTTTTCTACTTCCGATTTACTTCCCGCTGC 413 Query 420 TCAAGCTTTGCATAATAATCTTAGA-TTGTTCGAATCGGATTCGGTTTTGTGTCTTGAGA 478 ||||| |||||||||| |||||||| || ||||| ||||||||||||||||||||||||| Sbjct 414 TCAAGTTTTGCATAATCATCTTAGACTT-TTCGAGTCGGATTCGGTTTTGTGTCTTGAGA 472 Query 479 TTGCT-GGAGTTTGTGAGTGTTGGTGGAAGGAAGGTTTAGTGGGAAGAGAATCTTTGATT 537 | ||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 473 TCGCTGGGA-TTTGTGAGTGTTGGTGGAAGGAAGGTTTAGTGGAAAGAGAATCTTTGATT 531 Query 538 TCTCAGTCGTTACCGTTTTTGCTATCGAGGTCATTGACATTGAAGAAGAAAGTTGATGTT 597 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 532 TCTCAGTCGTTACCGTTTTTGCTTTCGAGGTCATTGACATTGAAGAAGAAAGTAGATGTT 591 Query 598 CATAGAGTTTATATGCTT-AGAGAAGCTTTTACATTGTTTGATTTTGAGGATGAGAGTAT 656 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct 592 CATAGAGTTTATATG-TTGAGAGAAGCTTTTACATTGTTTGATTTTGAGGATGAGAGTAT 650 Query 657 AGAAGATCTTAGGATGTTGCTT-ATGCGGTGTGTTGTTTCGCCGTTGTATGTGAAGACTG 715 |||||||| ||||||||| || ||||| ||||| ||||||||||||||||||||||| | Sbjct 651 TGAAGATCTGAGGATGTTG-TTGATGCGATGTGTGGTTTCGCCGTTGTATGTGAAGACCG 709 Query 716 AAGATGGTCAGAGATTTGTTTCTTTTGCTTTCGGGCTTAGTCGACAGTTGATGAAATCTG 775 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 710 AAGATGGTCAGAGATTTGTTTCTTTTGCTTTCGGGCTTAGTCGACAGTTGATGAAAGCTG 769 Query 776 GTCTTGCTGTTGTTAAGGCTCAGATTCCTTTGGGGAGCAAATCTGTGCTTGAAGGTTTTG 835 | ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct 770 GCCTTGCTGTTGTTAAGGCTCAGATTCCTTTGGGGAGGAAATCTGTGCTTGAAGGCTTTG 829 Query 836 GTGGGATTTTGTTTAGAGCTTGGAAAGAAGTGGAGTTAGATTTAAAAGGTGAGATTGAAG 895 ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| Sbjct 830 GTGGGATTTTGTTTAGAGCTTGGAAAGAAGTGGAGCTAGATTTGAAAGGTGAGATTGAAG 889 Query 896 ATGGGTTTTTGCAGGGGATTATTGATAGTGCTATTCACGCTAGTTCGTCCGCCTTTGCTG 955 |||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||| Sbjct 890 ATGGGTTTTTGCAGGGGATTATCGATAGTGCTATTCACGCCAGTTCGTGCGCCTTTGCTG 949 Query 956 CCTCGTTAAGGAGGGTTTTAGGCG-GGTTT-ATTAGTCAGCGGACCTCTCAAGGTGTTGA 1013 ||||||||||||||||||| || | ||||| || ||||||||||| ||||||| ||||| Sbjct 950 CCTCGTTAAGGAGGGTTTT-GG-GAGGTTTCATCAGTCAGCGGACAACTCAAGGAGTTGA 1007 Query 1014 GAAGCTTCTCTTTA-CTCTTGCTGAGCCTATGATATTTCGCTCGTTACAGGTTGCAAATT 1072 |||||||||||||| | ||||||||||||||||||||||| || || ||||||||||||| Sbjct 1008 GAAGCTTCTCTTTAGC-CTTGCTGAGCCTATGATATTTCGATCATTGCAGGTTGCAAATT 1066 Query 1073 CAAATGTTCGTTTAAATGCTTTACATTTGCTTCTGGATCTTTTCCCCATGGAGGATCCAG 1132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1067 CAAATGTTCGTTTAAATGCTTTACATTTGCTTCTGGATCTTTTCCCCATGGAGGATCCCG 1126 Query 1133 ATGCAACAAAAGAAGCAAAAGATACTCTGCTTGACAAACAGTTCTACTTGTTGGAAAAAT 1192 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1127 ATGCAACAAAAGAAGCAAAAGATACCCTGCTTGACAAACAGTTCTACTTGTTGGAAAAAT 1186 Query 1193 T-ATTGAGTGATGAATGCCCAGATGTGAGGTCTGTTGCTGTGGAAGGTCTCTCTCGAGTT 1251 | | |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1187 TGA-TGAGTGATGAATACCCAGATGTGAGGTCTGTTGCTGTGGAAGGTCTCTGTCGAGTT 1245 Query 1252 TTCTATCTTTTCTGGGAAGTGATCCCATCAGCAACAATTACCAAGGTCCTCACGAAAATT 1311 |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| Sbjct 1246 TTCTATCTTTTCTGGGAAGTGATCCCATCAACAACAATTACCAAGGTCCTCACAAAAATT 1305 Query 1312 TTCGATGATATGTCACATGAATCGTGCAGTGAGGTTAGACTTTCAACGGTTAATGGTATA 1371 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1306 TTCGATGATATGTCACATGAATCGTGCAGTGAGGTTAGACTTTCAACCGTTAATGGTATA 1365 Query 1372 ACTTATCTCCTCGCGAACCCACAATCCCATGGCATTCTTAAAGTGATTCTGCCAAGACTG 1431 |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| Sbjct 1366 ACTTATCTCCTCGCGAACCCACAATCCCATGGAATTCTTAAAGTGGTTCTGCCAAGACTG 1425 Query 1432 GGGCATTTGATGCTAGATAGTGTTACTTCAGTACGCGTTGCAATGGTAGATCTACTGCTT 1491 |||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||| Sbjct 1426 GGGCATTTGATGCTAGATAGTGTTACTTCAATACGTGTTGCGATGGTAGATCTACTGCTT 1485 Query 1492 CTTATACGAGATGTTCGCGCTTTCCAGTTTAACACGGTAGTGAGCTTGGATGTGTTATTA 1551 ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1486 CTTTTACGAGATGTTCGCGCTTTCCAGTTCAACACGGTAGTGAGCTTGGATGTGTTATTA 1545 Query 1552 TCTGTGCTTGCCTCTGATCAGACTCATGTTGCTAAGGGAATCGCTCGACTGCTAATACCA 1611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1546 TCTGTGCTTGCCTCTGATCAGACTCATGTTGCTAAGGGAATCGCTCGACTGCTAATACCA 1605 Query 1612 TCATACTTTCCATCACGAAAGAGAGCTGAGGAGGCATGCCAGCGATGTAGGACACTCATA 1671 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1606 TCATACTTTCCATCAAGAAAGAGAGCTGAGGAGGCATGCCAGCGATGTAGGACACTCATA 1665 Query 1672 AACAGAAACCCAAAGGCTGGTGCAAGATTTTGCGAATTTTTAGTATCTCTAGGAGCAACC 1731 ||||||||||||| |||||||||||| |||| ||||||||| |||||| ||||||||||| Sbjct 1666 AACAGAAACCCAATGGCTGGTGCAAGGTTTTCCGAATTTTTGGTATCTTTAGGAGCAACC 1725 Query 1732 GTTAAATCTGTACTGCACCTTGTTGGATTCTTCTTGAATTCAGTTTTGTCAGGTGATAAG 1791 ||| |||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||| Sbjct 1726 GTTCAATCTGTACTGCACCTCGTTGGGTTCTTCTTGAATTCAGTCTTGTCAGGTGATAAG 1785 Query 1792 CTATTGGAGAATCAGACTGAAGGCTTGCTTCGTGCTGCGTACTATCTCTGTAAAGATTTG 1851 ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1786 CTAGACGAGAATCAGACTGAAGGCTTGCTTCGTGCTGCGTACCATCTCTGTAAAGATTTG 1845 Query 1852 GTTGCTGATTCTGGGTGTATGGCCTCCCTGAAAGAGTTGTTACCTGGAGAAAAATTGAAA 1911 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1846 GTTGCTGATTCTGGGTGTATGGCCTCCCTGAAAGAGTTGTTACCTGGAGAAAAAATGAAA 1905 Query 1912 AGCTTGCTAGCTTTCGCACCCACTGCACAGGCTCAGTCATCTGTCATTGATATAATCACT 1971 |||||||| ||||| |||||||||||||||||| |||| ||||| |||||||||| || Sbjct 1906 AGCTTGCTTGCTTTTGCACCCACTGCACAGGCTGTGTCAGCTGTCTTTGATATAATTGCT 1965 Query 1972 ATGGTCTCCCCTGATATTGTCTCTGAAGTCCTTGAAGATTGCATGAATTTAGTTGTTAAT 2031 ||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||| ||| Sbjct 1966 ATGGTCTCCCCTGATATCGTCTCTGAAGTCCTAGAAGATTGCATGAATTTAGCTGTAAAT 2025 Query 2032 TGTGGTGGTTTGCCTAGTGATGCAGGACGACAGACGGAGTTGAGATCTGTACACAAGTTA 2091 ||||||||||| ||| | ||||||||||||||||| |||||||||||||||||||||||| Sbjct 2026 TGTGGTGGTTTACCTGGGGATGCAGGACGACAGACCGAGTTGAGATCTGTACACAAGTTA 2085 Query 2092 CTCCTGTCTTCTAATGCCTTTTGTGACCTCATTGGAACTTTTACCAGTATCATGCAGAAG 2151 ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct 2086 CTCCTGTCTTCTAATGCCTTTCGTGACCTCATTGGAACTTTTACCAGTATCGTGCAGAAG 2145 Query 2152 ACTGCGTACCGTTGTCAAATCAATTTTGGCTATGAAGTAGAAAGAAAGAATTTACAGTCC 2211 |||||||||||||||||||||||||||||||| |||||||||||||||||| | || ||| Sbjct 2146 ACTGCGTACCGTTGTCAAATCAATTTTGGCTACGAAGTAGAAAGAAAGAATGTGCATTCC 2205 Query 2212 ATGAAGAGGAAGAAATCAAAATCCTCTGGAAAATCTTCGGTAAGGTGGAAACATGTTAGC 2271 ||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||| Sbjct 2206 ATGAAGAGGAAAAAATCAAAGTCCTCTGGAAAATCTTCGGCAAGGTGGAAACATGTTAGC 2265 Query 2272 GGAAAAAATGCAATCAGTTTCGAGGAAGATTATTTGGTTGCTGTAGGAATAGCATGGCAA 2331 ||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||| Sbjct 2266 GGAAAAAATGCAATCCGTTTCGAGGAAGATTATTCGGTTTCTGTAGGAATAGCATGGCAG 2325 Query 2332 ATAAAGGATTTACTCACTACCGAAGATGCACGTAAATCTATACTGGAGTCTGATATTGAG 2391 ||||||||||||||||||| ||||| |||||||||| |||||||||||||||| ||||| Sbjct 2326 ATAAAGGATTTACTCACTATCGAAGCTGCACGTAAAGCTATACTGGAGTCTGACATTGAA 2385 Query 2392 GAGCTGCTCCTTTCCTTAAAAGTCGTCTCACACACTAGCATTTTGCAAGCCACTTGTTGT 2451 ||||| |||||| |||| ||||||||||| || ||||||||| |||||||||||||||| Sbjct 2386 GAGCTACTCCTTGCCTTGAAAGTCGTCTCCCAGACTAGCATTCTGCAAGCCACTTGTTGC 2445 Query 2452 GAATACATGGACGTGAATCCAGATATTATGGACCAAACAATGGATCACATCCTAGTCTGT 2511 ||||||||||||||| | |||||||| ||||||| |||||||||||||||||||| |||| Sbjct 2446 GAATACATGGACGTGTACCCAGATATCATGGACCGAACAATGGATCACATCCTAGGCTGT 2505 Query 2512 ACAGATGAACTATTTCAGGCAGGTGACATTGGAACGCCAGGCACCACATCTCCAGAGGCT 2571 |||||||||||||||||| |||| |||| |||||||||||||| |||||||||||||||| Sbjct 2506 ACAGATGAACTATTTCAGACAGGGGACAGTGGAACGCCAGGCATCACATCTCCAGAGGCT 2565 Query 2572 AACCTTAGCAAGAAACCGACTACAAGTAACGGCAACCAACCAAAACGAAGAAATAGAAAT 2631 ||||||||||| ||||| |||||||||||||||| |||||||||| ||||| || | | Sbjct 2566 AACCTTAGCAAAAAACCCACTACAAGTAACGGCAGCCAACCAAAAAGAAGACATTCCATT 2625 Query 2632 GCTCGTGATGATGCTTCTGAAGGATCAAAGGAAGGAGGTGTACTGAACAAGGTCAAAATG 2691 ||| |||||||||||||||| |||||||||||||||||||| || ||||| ||||||||| Sbjct 2626 GCTGGTGATGATGCTTCTGAGGGATCAAAGGAAGGAGGTGTGCTTAACAATGTCAAAATG 2685 Query 2692 CTAACTGCGATTTTCAAGTTTTTTGTTGAGTCTACAGAGATGGGTCTAGCTTCCAACTTT 2751 ||||||| |||| ||||||||||||||||||||||||| ||||||||||||||| |||| Sbjct 2686 CTAACTGTGATTCTCAAGTTTTTTGTTGAGTCTACAGATATGGGTCTAGCTTCCCACTTC 2745 Query 2752 CAAGCAAGTATGTTTAAGTTTTCATCTGCGTATCTAAAGTATGTCATCTCCATTTTCAAC 2811 |||||||| ||||| ||||| ||||||| ||||||||||||| ||||| |||||||| Sbjct 2746 CAAGCAAGGATGTTGAAGTTCACATCTGCATATCTAAAGTATGCCATCTTGATTTTCAAT 2805 Query 2812 GACCATTCAACCGGTAAGTTAGAATTTGAGGACGCTGATATGAAGGAAATGATTCTGTGT 2871 ||||||||||||||||||||| |||||||||| || ||||||||||| |||||||||||| Sbjct 2806 GACCATTCAACCGGTAAGTTACAATTTGAGGATGCAGATATGAAGGACATGATTCTGTGT 2865 Query 2872 ACAAAAAGCTCCACCAGTTATGCCGGAAAGTTCATAAACCTAGTGATGAGACATGCAACC 2931 ||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||| Sbjct 2866 ACAAAAAGCTCCACCAGTTATGCTGGAAAATTCATAAACCTAGTGCTGAGACATGCAACC 2925 Query 2932 GAAGCTTCACGCCCTTTGTTTGAATCATTTGACCTTGCAAATGACCTGCTTGATCTCTTC 2991 |||||||| | |||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct 2926 GAAGCTTCTCATCCTTTGTTTGAAGCTTTTGACCTTGCAAATGACCTGCTTGATCTCTTC 2985 Query 2992 ACCATGGTTGAGAAATCGT-TAGGCTCGGCTTATGCATCAAGAATTGTGTCAGCTTTAAA 3050 ||||||||||||| ||| | ||||||| ||||||||||||||| ||||| | |||||||| Sbjct 2986 ACCATGGTTGAGATATC-TCTAGGCTCAGCTTATGCATCAAGACTTGTGACCGCTTTAAA 3044 Query 3051 CCCTTGGATTCCAGATTTGGTTCTTGCACTAGGACCTTGTTTCATCAACAACGACA---- 3106 ||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 3045 CCCCTGGATACCAGATTTGGTTCTTGCACTAGGACCCTGTTTCATCAACAACGACAACTT 3104 Query 3107 -G-CGAAGAAAGTTCATACACCAGCTCATTCAACCACATCAAACTCTGCTTTCCTTCATG 3164 | |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| Sbjct 3105 CGACGAAGAAAGTTCATACACCAGCTCATTCAACCACATCAAACTCTGCGTTCCATCATG 3164 Query 3165 GCTTCTTACATGTGCGAAGATCGAACTACATGAAATTAACAAAGAAGATGTGACTGAGAC 3224 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 3165 GCTTCTTACATGTGCGAAGATCGAACTACATGAAATTAACAAAGAAGATGAGACTGAGAC 3224 Query 3225 CTCGGGTTTCCTGGCATTaaaaaaaCTGAGAAACACTATATTTACATTGGTGAAAGGTAA 3284 | ||| ||||| ||||||||||| |||||||||||| ||||||||||||||||||||||| Sbjct 3225 CCCGGATTTCCCGGCATTAAAAAGACTGAGAAACACCATATTTACATTGGTGAAAGGTAA 3284 Query 3285 CACCAAGGTGTTAGATGCAATTGGTTATGTTCTTTTGTTATGTTTGGCAGTCTGTATAGA 3344 |||||||||| |||||| ||||||||||||||||||| | ||||||||||| |||||||| Sbjct 3285 CACCAAGGTGATAGATGGAATTGGTTATGTTCTTTTGATGTGTTTGGCAGTGTGTATAGA 3344 Query 3345 GAAGAGGGATTACAGTACGGCTCTCGGGTTGCTACACTTGGTATGTGTGAAGTTGGTAGG 3404 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 3345 GAAGAGGGATTACAGTACGGCTCTCGGGTTGCTACACTTTGTATGTGTGAAGTTGGTAGG 3404 Query 3405 TAGTGAAGATAGAGAGTGGAAAGAGCTGGACACAATGTTGGTCTTACTTCCGAGAATTTA 3464 ||||||||||||||| |||||||||||||||||||||||||||| |||||| ||||| || Sbjct 3405 TAGTGAAGATAGAGAATGGAAAGAGCTGGACACAATGTTGGTCTCACTTCCAAGAATATA 3464 Query 3465 CCCGATAATAGAGCGAGAGATTGGTGAAGGAAGAGATGAAGATGAAGTGAAGACGCTGGA 3524 |||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||| Sbjct 3465 CCCGATAATAGAGCAAGAGATTGGTGAAGAAAGAGATGAAGATGAAGTGAAGAAGCTGGA 3524 Query 3525 GGCTGCAAGAGAACTGCTTCAACCTGTGTGGATGTACCATGTCTACGAAACCGGAAGGTT 3584 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3525 GGCTGCAAGAGAATTGCTTCAACCTGTGTGGATGTACCATGTCTACGAAACCGGAAGGTT 3584 Query 3585 CCACATGATGGATGAGGAAGAAGAATAGATAAGAATGTAACATTATTCGAGAGCAGTACT 3644 ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| Sbjct 3585 CCACATGATGGATGAAGAAGAAGAATAGATAAGAAAGTAACATTATTCGAGAGCAGTACC 3644 Query 3645 GTATTATGAGTTACTGCTGAAGCATGTAAATATGAGTTAATCCATGACAATCACTTCCGA 3704 |||| ||| | | || | | | ||| |||||| |||||||||||| || Sbjct 3645 GTAT-ATG--T-A------AA---T--A--T--GAGCTAATCCGTGACAATCACTTTTGA 3685 Query 3705 GAGTTTACCAGATAACATGAGCTAATTCATGGTATTTATTGTTTATA-GAAACTACCTTA 3763 || |||||||||||| |||||||||||||||||||||||||||| || |||||||||||| Sbjct 3686 GAATTTACCAGATAATATGAGCTAATTCATGGTATTTATTGTTT-TAAGAAACTACCTTA 3744 Query 3764 GAC 3766 ||| Sbjct 3745 GAC 3747 > Ahg475500 jgi|Araly1|475500|fgenesh2_kg.2__630__AT1G64970.1 Length=1314 Score = 115 bits (62), Expect = 2e-24 Identities = 77/84 (92%), Gaps = 2/84 (2%) Strand=Plus/Minus Query 3685 TCCATGACAATCACTTCCGAGAGTTTACCAGATAACATGAGCTAATTCATGGTATTTATT 3744 ||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||| Sbjct 1314 TCCGTGACAATCACTTTTGAGAATTTACCAGATAATATGAGCTAATTCATGGTATTTATT 1255 Query 3745 GTTTATA-GAAACTACCTTAGACA 3767 |||| || |||||||||||||||| Sbjct 1254 GTTT-TAAGAAACTACCTTAGACA 1232 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 142335323020 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5