BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G65340.1 Length=1512 Score E Sequences producing significant alignments: (Bits) Value Ahg495302 jgi|Araly1|495302|fgenesh2_kg.8__1118__AT5G52320.1 1567 0.0 Ahg475591 jgi|Araly1|475591|fgenesh2_kg.2__721__AT1G65340.1 1424 0.0 Ahg907906 jgi|Araly1|907906|Al_scaffold_0002_987 1031 0.0 Ahg338681 jgi|Araly1|338681|fgenesh1_pg.C_scaffold_2000780 950 0.0 Ahg925517 jgi|Araly1|925517|scaffold_201078.1 939 0.0 Ahg932132 jgi|Araly1|932132|scaffold_400120.1 255 5e-67 > Ahg495302 jgi|Araly1|495302|fgenesh2_kg.8__1118__AT5G52320.1 Length=1662 Score = 1567 bits (848), Expect = 0.0 Identities = 1297/1515 (86%), Gaps = 26/1515 (2%) Strand=Plus/Plus Query 11 TCATAGGTTTACTTGAAATCTTCACAGCATTTGTTTTCTTCATTTTCTTCCAATGTTTAT 70 ||||||| |||||||||||||||| | | || |||||||| || || ||| ||||| | Sbjct 73 TCATAGGCTTACTTGAAATCTTCATAACCTTCATTTTCTTCCTTGCCTACCAGTGTTTCT 132 Query 71 TACTCCACAAGAAAACTCCCAAGCCTTTGCTCACGAACTGGCCGGCCCTTGGGATGCTTC 130 ||||||||||||||||| |||| | || | ||||||||||||| |||||||||||||| Sbjct 133 CGCTCCACAAGAAAACTCCAAAGCATATGGTTACGAACTGGCCGGTCCTTGGGATGCTTC 192 Query 131 CGGGTCTACTCCTCCA-AGTGCCTCGTATCTACGAC-TGGATCACCGAGGTTCTTGA-GG 187 ||||| | ||||||| | | |||||| |||| ||| ||| |||| |||| |||||| || Sbjct 193 CGGGTGTGGTCCTCCACA-TCCCTCGTGTCTATGACTTGG-TCACTGAGGCTCTTGAGGG 250 Query 188 CGACAGATATGACGTTTTGTTTCAAAGGTCCAT-GTCTTAGCGGAATGGACATCTTGCTT 246 || | |||||||| |||||||| ||| |||| || |||| |||| ||||| || | Sbjct 251 AGA-AAATATGACGGGTTGTTTCATAGGGCCATGGT-TTAGTGGAACAGACATATTAATC 308 Query 247 ACTGTTGATCCGGTGAATATCCACTACATTCTAAGCTCAAATTTTGCTAACTACCCCAAA 306 |||| ||| |||||||||||||| ||||||||||| ||||| || | ||| ||||| ||| Sbjct 309 ACTGCTGACCCGGTGAATATCCAGTACATTCTAAGTTCAAACTTCGTTAATTACCCTAAA 368 Query 307 -GGAATGGAGTTCAAGAAGATCTTCGAAGTCGTGGGTGATTCAATTTTCAACGTTGACTC 365 |||| | |||| || |||||||| ||| || |||| ||| ||||||||||||||||| Sbjct 369 GGGAA-GAAGTTTAACAAGATCTTTGAATTCTTGGGAGATGGGATTTTCAACGTTGACTC 427 Query 366 GGGTTTGTGGGAGGATATGAGGAA-CTCGTCTCATGCCATTTTTAGTAATCAAGATTTCC 424 |||||||||||||||||||| ||| |||||||||||| ||||| || |||||||||||| Sbjct 428 GGGTTTGTGGGAGGATATGA-GAATCTCGTCTCATGCGATTTTCAGCCATCAAGATTTCC 486 Query 425 AAATG-TTCTGGGTGAGTACAAGTGTAAGAAAATTAAGGCAAGGGCTTGTTCCTATTCTT 483 ||| | || | |||||| ||||| ||||| |||||||||||||||||||||||||||||| Sbjct 487 AAA-GTTTTTCGGTGAGCACAAGCGTAAGCAAATTAAGGCAAGGGCTTGTTCCTATTCTT 545 Query 484 GAAAACGCAGCTGATAAAAATATCCTTGTCGACTTGCAAGATTTGTTCCAGAGATTCTTG 543 || ||||| | ||| ||| | || |||||||||||||||||| ||||||||||||||||| Sbjct 546 GATAACGCTGTTGAGAAACACATTCTTGTCGACTTGCAAGATGTGTTCCAGAGATTCTTG 605 Query 544 TTTGATACATCTTTGATTTTGATGACCGGGTATGATCCAAAATGTTTATCCGTTGAAATG 603 ||||| ||||||| || ||||||||| |||||||||||||||| | | ||| |||||||| Sbjct 606 TTTGACACATCTTCGACTTTGATGACTGGGTATGATCCAAAATCTCTCTCCATTGAAATG 665 Query 604 CCTAAGGTTGAGTTCGGTGACGCGGTCGATGGTGTTTCTGACGGGGTTTTCTATAGACAT 663 |||||||||||||||| ||| ||| | ||||| ||| | || | | | |||||||||||| Sbjct 666 CCTAAGGTTGAGTTCGCTGATGCGATGGATGGAGTTGCAGATGCGATGTTCTATAGACAT 725 Query 664 GTTAAGCCGGTTTTCTTGT-GGAGGCTCCAATATTTGATTGGTGTAGGAGTAGAGAA-AA 721 | ||||||| |||| ||| ||| |||||||| || ||| ||||||||||||||||| || Sbjct 726 CTCAAGCCGGCTTTCCTGTGGGA-GCTCCAATCTTGGATCGGTGTAGGAGTAGAGAAGAA 784 Query 722 GATTGAAAAGAGGTCTAGCGGTATTCGATCAACTACTCGAGAAGATCATAACGGCTAAAC 781 || ||| ||||||||| ||||| ||||||||| | || | |||||||||| ||||||||| Sbjct 785 GA-TGAGAAGAGGTCTCGCGGTTTTCGATCAAATGCTAGGGAAGATCATATCGGCTAAAC 843 Query 782 GAGAGGAGATCAATAGTCATGGGACTCATCATCCCTCAA-GAGGA-GAGGCCATAGACGT 839 ||||||||||||| |||||||||| |||| | | | || || || |||||||| ||||| Sbjct 844 GAGAGGAGATCAAAAGTCATGGGATTCATGA-CTCGAAAGGA-GAGGAGGCCATGGACGT 901 Query 840 GTTGACATACTACATGACTATGGACACGACCAAATATAAGTACTTGGAACCAAGTGATGA 899 || ||||| ||||||||||| ||||||||||||||||| ||||| |||| ||| | || Sbjct 902 TTTAACATATTACATGACTATAGACACGACCAAATATAAACACTTGAAACCGAGTAACGA 961 Query 900 TAGATTCATCAAAGACACTATTTTGGGTTTCTTGATAGCGGCAAGAGATACAACAAGTTC 959 || |||||||| |||||||||||||||||| ||||||||||||||||| |||||||| || Sbjct 962 TAAATTCATCAGAGACACTATTTTGGGTTTTTTGATAGCGGCAAGAGACACAACAAGATC 1021 Query 960 AGCACTCACTTGGTTCTTCTGGCTTATGTCCAAGAACCCTGAGGCAATAAACAAGATCCG 1019 ||| ||||||||||| ||||||||| | || ||||||||||| ||||| | ||||||||| Sbjct 1022 AGCTCTCACTTGGTTATTCTGGCTTCTCTCTAAGAACCCTGAAGCAATGACCAAGATCCG 1081 Query 1020 ACAAGAGGTTAACAAGAAGATGCCGAGGTTTGATCCCGCAGATTTAGAAAAGCTCGTGTA 1079 ||||||| |||||||||||||||| | |||| |||||||||||||||| ||||||||||| Sbjct 1082 ACAAGAGATTAACAAGAAGATGCCAAAGTTTAATCCCGCAGATTTAGACAAGCTCGTGTA 1141 Query 1080 TCTACACGGTGCCGTGTGTGAGACGCTAAGGTTATACCCACCAGTTCCATTTAACCACAA 1139 |||| | |||||||||||||| ||||||||| |||||||| |||| |||||||||||||| Sbjct 1142 TCTAGATGGTGCCGTGTGTGAAACGCTAAGGCTATACCCATCAGTCCCATTTAACCACAA 1201 Query 1140 GTCACCGGCAAAGCCAGACGTACTTCCAAGTGGGCATAGAGTAGATGAGAAATGGAAGAT 1199 |||||||||||||||||| || |||||||||||||||||||| |||||||| |||| | | Sbjct 1202 GTCACCGGCAAAGCCAGATGTTCTTCCAAGTGGGCATAGAGTCGATGAGAATTGGAGGGT 1261 Query 1200 TGTCATATCTATGTATGCATTAGGGAGGATGAAATCTGTTTGGGGAGATGACGCAGAAGA 1259 || || |||| | |||| | |||||||||||||||||||||||||||||||||||||| Sbjct 1262 AGTAATCCCTATTTTTGCAGTGGGGAGGATGAAATCTGTTTGGGGAGATGACGCAGAAGA 1321 Query 1260 TTT-CAGACCAGAGAGATGGATTTCAGACAGTGGAAGGTTAAAACATGAACCTTCATATA 1318 ||| | |||||||||||||||||||||||||||||| ||| | ||| ||| ||||||||| Sbjct 1322 TTTTC-GACCAGAGAGATGGATTTCAGACAGTGGAATGTTGAGACAAGAATCTTCATATA 1380 Query 1319 AGTTCTTGGCGTTTAACGCCGGTCCAAGAGCTTGCTTGGGGAAAAAGTTAACGTTCTTAC 1378 |||| ||||| |||||||| ||||||||| ||||||||||||||| |||||| ||||| | Sbjct 1381 AGTTTTTGGCATTTAACGCTGGTCCAAGAACTTGCTTGGGGAAAAGGTTAACATTCTTGC 1440 Query 1379 AGATGAAGACAGTGGCTG-CGGAAATCATACGAAACTATGACATCAAGGTCGTTGAAGGG 1437 || |||||||||| || | || |||||||| ||||||||||||| ||||||||||||||| Sbjct 1441 AGGTGAAGACAGTAGCGGTCG-AAATCATAAGAAACTATGACATTAAGGTCGTTGAAGGG 1499 Query 1438 CACAAAACCGAACCAGTTCCTTCTGTTCTTTTTCGTATGCAACATGGTCTCAAAGTTAAT 1497 |||||| || ||||||||||||| |||||| |||| |||||||||||||||||||||| | Sbjct 1500 CACAAACCCAAACCAGTTCCTTCCGTTCTTCTTCGCATGCAACATGGTCTCAAAGTTAGT 1559 Query 1498 ATCACTAGGATCTAG 1512 |||||| ||| ||| Sbjct 1560 GTCACTAAGATTTAG 1574 > Ahg475591 jgi|Araly1|475591|fgenesh2_kg.2__721__AT1G65340.1 Length=1380 Score = 1424 bits (771), Expect = 0.0 Identities = 897/959 (94%), Gaps = 4/959 (0%) Strand=Plus/Plus Query 315 GTTCAAGAAGATCTTCGAAGTCGTGGGTGATTCAATTTTCAACGTTGACTCGGGTTTGTG 374 ||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct 258 GTTTAAGAAGATCTTTGAAGTCGTGGGTGATTCCATTTTCAACGTTGACTCGGGTTTGTG 317 Query 375 GGAGGATATGAGGAACTCGTCTCATGCCATTTTTAGTAATCAAGATTTCCAAATGTTCTG 434 |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct 318 GGAGGATATGAGGAACTCGTCTCATGCCATTTTTAGCCATCAAGATTTCCAAAGGTTCTG 377 Query 435 GGTGAGTA-CAAGTGTAAGA-AAATTAAGGCAAGGGCTTGTTCCTATTCTTGAAAACGCA 492 |||||| | ||||||||| | |||||||||||||||||||||||||||||||| ||| | Sbjct 378 GGTGAG-AGCAAGTGTAA-ACAAATTAAGGCAAGGGCTTGTTCCTATTCTTGAGAACACT 435 Query 493 GCTGATAAAAATATCCTTGTCGACTTGCAAGATTTGTTCCAGAGATTCTTGTTTGATACA 552 |||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct 436 GCTGATAAAAATATTCTTGTAGACTTCCAAGATTTGTTCCAGAGATTCTTGTTTGATACA 495 Query 553 TCTTTGATTTTGATGACCGGGTATGATCCAAAATGTTTATCCGTTGAAATGCCTAAGGTT 612 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || Sbjct 496 TCTTTGATTTTGATGACCGGGTATGATCCAAAATGTTTATCCATTGAAATGCCTAAAGTC 555 Query 613 GAGTTCGGTGACGCGGTCGATGGTGTTTCTGACGGGGTTTTCTATAGACATGTTAAGCCG 672 ||||| ||||||||||| ||||||||||| ||||||||||||||||| |||||||||||| Sbjct 556 GAGTTTGGTGACGCGGTTGATGGTGTTTCAGACGGGGTTTTCTATAGGCATGTTAAGCCG 615 Query 673 GTTTTCTTGTGGAGGCTCCAATATTTGATTGGTGTAGGAGTAGAGAAAAGATTGAAAAGA 732 |||||| |||||||| ||||||||| ||||||||||||||| ||||| ||||||||||| Sbjct 616 GTTTTCCTGTGGAGGTTCCAATATTGGATTGGTGTAGGAGTCGAGAAGCGATTGAAAAGA 675 Query 733 GGTCTAGCGGTATTCGATCAACTACTCGAGAAGATCATAACGGCTAAACGAGAGGAGATC 792 ||||| ||||| ||||||||||| || ||||||||||||||| | ||| ||||||||||| Sbjct 676 GGTCTTGCGGTTTTCGATCAACTTCTTGAGAAGATCATAACGACCAAAAGAGAGGAGATC 735 Query 793 AATAGTCATGGGACTCATCATCCCTCAAGAGGAGAGGCCATAGACGTGTTGACATACTAC 852 || |||||||||||| |||||| |||||||||||||||||||||||| |||||||||||| Sbjct 736 AAAAGTCATGGGACTGATCATCACTCAAGAGGAGAGGCCATAGACGTTTTGACATACTAC 795 Query 853 ATGACTATGGACACGACCAAATATAAGTACTTGGAACCAAGTGATGATAGATTCATCAAA 912 |||||| ||||||||||||| |||||| ||||| |||| |||||||||| |||||||||| Sbjct 796 ATGACTGTGGACACGACCAAGTATAAGAACTTGAAACCGAGTGATGATAAATTCATCAAA 855 Query 913 GACACTATTTTGGGTTTCTTGATAGCGGCAAGAGATACAACAAGTTCAGCACTCACTTGG 972 ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct 856 GACACTATTTTGGGTTTCTTGATAGCGGCAAGAGACACAACAAGTTCAGCTCTCACTTGG 915 Query 973 TTCTTCTGGCTTATGTCCAAGAACCCTGAGGCAATAAACAAGATCCGACAAGAGGTTAAC 1032 |||||||||||| |||||||||||||||| ||||| |||||||| ||||||||||||||| Sbjct 916 TTCTTCTGGCTTCTGTCCAAGAACCCTGAAGCAATGAACAAGATTCGACAAGAGGTTAAC 975 Query 1033 AAGAAGATGCCGAGGTTTGATCCCGCAGATTTAGAAAAGCTCGTGTATCTACACGGTGCC 1092 |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| Sbjct 976 AAGAAGATGCCGAGGTTTAATCCCGCAGATTTAGACAAGCTCGTGTATCTACACGGTGCC 1035 Query 1093 GTGTGTGAGACGCTAAGGTTATACCCACCAGTTCCATTTAACCACAAGTCACCGGCAAAG 1152 ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| | Sbjct 1036 GTGTGTGAGACGCTAAGGTTATATCCACCAGTCCCATTTAACCACAAGTCACCGGCAATG 1095 Query 1153 CCAGACGTACTTCCAAGTGGGCATAGAGTAGATGAGAAATGGAAGATTGTCATATCTATG 1212 |||||||| |||||||||||||||| ||| |||||||| ||||||||||||||||||||| Sbjct 1096 CCAGACGTGCTTCCAAGTGGGCATAAAGTCGATGAGAATTGGAAGATTGTCATATCTATG 1155 Query 1213 TATGCATTAGGGAGGATGAAATCTGTTTGGGGAGATGACGCAGAAGATTTCAGACCAGA 1271 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1156 TATGCATTAGGGAGGATGAAATCTGTTTGGGGAGATGACGCGGAAGATTTCAGACCAGA 1214 Score = 405 bits (219), Expect = 5e-112 Identities = 245/258 (95%), Gaps = 0/258 (0%) Strand=Plus/Plus Query 1 ATGGCGATAGTCATAGGTTTACTTGAAATCTTCACAGCATTTGTTTTCTTCATTTTCTTC 60 ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| Sbjct 1 ATGGCGATAGTCATAGGCTTACTTGAAATCTTCATAGCATTTGTTTTCTTCATTTTCTTC 60 Query 61 CAATGTTTATTACTCCACAAGAAAACTCCCAAGCCTTTGCTCACGAACTGGCCGGCCCTT 120 |||| |||||| |||||||||||| |||||||||||||||||||||||||||||| ||| Sbjct 61 CAATATTTATTGCTCCACAAGAAATCTCCCAAGCCTTTGCTCACGAACTGGCCGGTCCTA 120 Query 121 GGGATGCTTCCGGGTCTACTCCTCCAAGTGCCTCGTATCTACGACTGGATCACCGAGGTT 180 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 121 GGGATGCTTCCGGGTCTGCTCCTCCAAGTGCCTCGTATCTACGACTGGATCACCGAGGTT 180 Query 181 CTTGAGGCGACAGATATGACGTTTTGTTTCAAAGGTCCATGTCTTAGCGGAATGGACATC 240 |||||||| || |||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct 181 CTTGAGGCCACCGATATGACGTTTTGTTTCAAAGGTCCATATCTTAGTGGAATGGACATC 240 Query 241 TTGCTTACTGTTGATCCG 258 ||||| |||||||||||| Sbjct 241 TTGCTCACTGTTGATCCG 258 Score = 274 bits (148), Expect = 1e-72 Identities = 160/166 (96%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 1347 AGCTTGCTTGGGGAAAAAGTTAACGTTCTTACAGATGAAGACAGTGGCTGCGGAAATCAT 1406 |||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct 1215 AGCTTGCTTGGGAAAAAAGTTAACGTTCTTGCAGATGAAGACCGTGGCTGCGGAAATCAT 1274 Query 1407 ACGAAACTATGACATCAAGGTCGTTGAAGGGCACAAAACCGAACCAGTTCCTTCTGTTCT 1466 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1275 ACGAAACTATGACATCAAGGTCGTTGAAGGGCACAAAACCGAACCTGTTCCTTCTGTTCT 1334 Query 1467 TTTTCGTATGCAACATGGTCTCAAAGTTAATATCACTAGGATCTAG 1512 |||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct 1335 TTTTCGCATGCAACATGGTCTCAAAGTTAATATCACTAAGATCTAG 1380 > Ahg907906 jgi|Araly1|907906|Al_scaffold_0002_987 Length=1059 Score = 1031 bits (558), Expect = 0.0 Identities = 608/633 (96%), Gaps = 0/633 (0%) Strand=Plus/Plus Query 880 TACTTGGAACCAAGTGATGATAGATTCATCAAAGACACTATTTTGGGTTTCTTGATAGCG 939 |||||| ||||||||||||||| |||||| |||||||||||||||||||||||||||| | Sbjct 427 TACTTGAAACCAAGTGATGATAAATTCATTAAAGACACTATTTTGGGTTTCTTGATAGTG 486 Query 940 GCAAGAGATACAACAAGTTCAGCACTCACTTGGTTCTTCTGGCTTATGTCCAAGAACCCT 999 |||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||| Sbjct 487 GCAAGAGACACAACAAGTTCAGCTCTCACTTGGTTCTTCTGGCTTCTGTCCAAGAACCCT 546 Query 1000 GAGGCAATAAACAAGATCCGACAAGAGGTTAACAAGAAGATGCCGAGGTTTGATCCCGCA 1059 || ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 547 GAAGCAATGAACAAGATTCGACAAGAGGTTAACAAGAAGATGCCGAGGTTTGATCCCGCA 606 Query 1060 GATTTAGAAAAGCTCGTGTATCTACACGGTGCCGTGTGTGAGACGCTAAGGTTATACCCA 1119 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 607 GATTTAGACAAGCTCGTGTATCTACACGGTGCCGTGTGTGAGACGCTAAGGTTATACCCA 666 Query 1120 CCAGTTCCATTTAACCACAAGTCACCGGCAAAGCCAGACGTACTTCCAAGTGGGCATAGA 1179 ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| | Sbjct 667 CCAGTCCCATTTAACCACAAGTCACCGGCAAAGCCAGACGTGCTTCCAAGTGGGCATAAA 726 Query 1180 GTAGATGAGAAATGGAAGATTGTCATATCTATGTATGCATTAGGGAGGATGAAATCTGTT 1239 || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 727 GTCGATGAGAATTGGAAGATTGTCATATCTATGTATGCATTAGGGAGGATGAAATCTGTT 786 Query 1240 TGGGGAGATGACGCAGAAGATTTCAGACCAGAGAGATGGATTTCAGACAGTGGAAGGTTA 1299 |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| Sbjct 787 TGGGGAGATGACGCGGAAGATTTCAGACCAGAGAGATGGATTTCATACAGTGGAAGGTTA 846 Query 1300 AAACATGAACCTTCATATAAGTTCTTGGCGTTTAACGCCGGTCCAAGAGCTTGCTTGGGG 1359 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 847 AAACATGAACCTTCATATAAGTTCTTGGCGTTTAACGCTGGTCCAAGAGCTTGCTTGGGA 906 Query 1360 AAAAAGTTAACGTTCTTACAGATGAAGACAGTGGCTGCGGAAATCATACGAAACTATGAC 1419 ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| Sbjct 907 AAAAAGTTAACGTTCTTGCAGATGAAGACAGTGGCTGTGGAAATCATACGAAACTATGAC 966 Query 1420 ATCAAGGTCGTTGAAGGGCACAAAACCGAACCAGTTCCTTCTGTTCTTTTTCGTATGCAA 1479 |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct 967 ATCAAGGTCGTTGAAGGGCACAAAACCGAACCTGTTCCTTCTGTTCTTTTTCGCATGCAA 1026 Query 1480 CATGGTCTCAAAGTTAATATCACTAGGATCTAG 1512 ||||||||||||||||||||||||| ||||||| Sbjct 1027 CATGGTCTCAAAGTTAATATCACTAAGATCTAG 1059 Score = 588 bits (318), Expect = 4e-167 Identities = 373/400 (93%), Gaps = 2/400 (1%) Strand=Plus/Plus Query 439 AGTACAAGTGTAAGA-AAATTAAGGCAAGGGCTTGTTCCTATTCTTGAAAACGCAGCTGA 497 ||||||||||||| | |||||||||||||||||||||||||||||||| ||||| | ||| Sbjct 28 AGTACAAGTGTAA-ACAAATTAAGGCAAGGGCTTGTTCCTATTCTTGAGAACGCTGTTGA 86 Query 498 TAAAAATATCCTTGTCGACTTGCAAGATTTGTTCCAGAGATTCTTGTTTGATACATCTTT 557 |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| Sbjct 87 TAAAAATATCCTTGTCGACTTGCAAGATGTGTTCCAGAGATTCTTGTTTGACACATCTTT 146 Query 558 GATTTTGATGACCGGGTATGATCCAAAATGTTTATCCGTTGAAATGCCTAAGGTTGAGTT 617 |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 147 GATTTTGATGTCCGGGTATGATCCAAAATGTTTATCTATTGAAATGCCTAAGGTTGAGTT 206 Query 618 CGGTGACGCGGTCGATGGTGTTTCTGACGGGGTTTTCTATAGACATGTTAAGCCGGTTTT 677 ||||||||| || |||||||| |||||| | ||||||||||||||||| ||||||||||| Sbjct 207 CGGTGACGCAGTAGATGGTGTCTCTGACAGAGTTTTCTATAGACATGTCAAGCCGGTTTT 266 Query 678 CTTGTGGAGGCTCCAATATTTGATTGGTGTAGGAGTAGAGAAAAGATTGAAAAGAGGTCT 737 |||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||| Sbjct 267 CTTGTGGAGGCTCCAATATTGGATTGGTGTAGGACTCGAGAAAAGATTGAAAAGAGGTCT 326 Query 738 AGCGGTATTCGATCAACTACTCGAGAAGATCATAACGGCTAAACGAGAGGAGATCAATAG 797 ||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||| || Sbjct 327 TGCGGTTTTCGATCAACTTCTCGAGAAGATCATAACGGCTAAAAGAGAGGAGATCAAAAG 386 Query 798 TCATGGGACTCATCATCCCTCAAGAGGAGAGGCCATAGAC 837 || ||||||||| |||| |||||||||||||||||||||| Sbjct 387 TCTTGGGACTCAACATCACTCAAGAGGAGAGGCCATAGAC 426 > Ahg338681 jgi|Araly1|338681|fgenesh1_pg.C_scaffold_2000780 Length=771 Score = 950 bits (514), Expect = 0.0 Identities = 554/574 (97%), Gaps = 0/574 (0%) Strand=Plus/Plus Query 939 GGCAAGAGATACAACAAGTTCAGCACTCACTTGGTTCTTCTGGCTTATGTCCAAGAACCC 998 ||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 198 GGCAAGAGACACAACAAGTTCAGCTCTCACTTGGTTCTTCTGGCTTCTGTCCAAGAACCC 257 Query 999 TGAGGCAATAAACAAGATCCGACAAGAGGTTAACAAGAAGATGCCGAGGTTTGATCCCGC 1058 ||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 258 TGAAGCAATGAACAAGATTCGACAAGAGGTTAACAAGAAGATGCCGAGGTTTGATCCCGC 317 Query 1059 AGATTTAGAAAAGCTCGTGTATCTACACGGTGCCGTGTGTGAGACGCTAAGGTTATACCC 1118 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 318 AGATTTAGACAAGCTCGTGTATCTACACGGTGCCGTGTGTGAGACGCTAAGGTTATACCC 377 Query 1119 ACCAGTTCCATTTAACCACAAGTCACCGGCAAAGCCAGACGTACTTCCAAGTGGGCATAG 1178 |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 378 ACCAGTCCCATTTAACCACAAGTCACCGGCAAAGCCAGACGTGCTTCCAAGTGGGCATAA 437 Query 1179 AGTAGATGAGAAATGGAAGATTGTCATATCTATGTATGCATTAGGGAGGATGAAATCTGT 1238 ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 438 AGTCGATGAGAATTGGAAGATTGTCATATCTATGTATGCATTAGGGAGGATGAAATCTGT 497 Query 1239 TTGGGGAGATGACGCAGAAGATTTCAGACCAGAGAGATGGATTTCAGACAGTGGAAGGTT 1298 ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| Sbjct 498 TTGGGGAGATGACGCGGAAGATTTCAGACCAGAGAGATGGATTTCATACAGTGGAAGGTT 557 Query 1299 AAAACATGAACCTTCATATAAGTTCTTGGCGTTTAACGCCGGTCCAAGAGCTTGCTTGGG 1358 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 558 AAAACATGAACCTTCATATAAGTTCTTGGCGTTTAACGCTGGTCCAAGAGCTTGCTTGGG 617 Query 1359 GAAAAAGTTAACGTTCTTACAGATGAAGACAGTGGCTGCGGAAATCATACGAAACTATGA 1418 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 618 AAAAAAGTTAACGTTCTTGCAGATGAAGACAGTGGCTGCGGAAATCATACGAAACTATGA 677 Query 1419 CATCAAGGTCGTTGAAGGGCACAAAACCGAACCAGTTCCTTCTGTTCTTTTTCGTATGCA 1478 ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct 678 CATCAAGGTCGTTGAAGGGCACAAAACCGAACCTGTTCCTTCTGTTCTTTTTCGCATGCA 737 Query 1479 ACATGGTCTCAAAGTTAATATCACTAGGATCTAG 1512 |||||||||||||||||||||||||| ||||||| Sbjct 738 ACATGGTCTCAAAGTTAATATCACTAAGATCTAG 771 Score = 281 bits (152), Expect = 8e-75 Identities = 180/194 (93%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 601 ATGCCTAAGGTTGAGTTCGGTGACGCGGTCGATGGTGTTTCTGACGGGGTTTTCTATAGA 660 |||||||||||||||||||||||||| || |||||||| |||||| | |||||||||||| Sbjct 1 ATGCCTAAGGTTGAGTTCGGTGACGCAGTAGATGGTGTCTCTGACAGAGTTTTCTATAGA 60 Query 661 CATGTTAAGCCGGTTTTCTTGTGGAGGCTCCAATATTTGATTGGTGTAGGAGTAGAGAAA 720 ||||| ||||||||||||||||||||||||||||||| ||||||||||||| | |||||| Sbjct 61 CATGTCAAGCCGGTTTTCTTGTGGAGGCTCCAATATTGGATTGGTGTAGGACTCGAGAAA 120 Query 721 AGATTGAAAAGAGGTCTAGCGGTATTCGATCAACTACTCGAGAAGATCATAACGGCTAAA 780 ||||||||||||||||| ||||| || |||||||| |||||||||||||||||||||||| Sbjct 121 AGATTGAAAAGAGGTCTTGCGGTTTTTGATCAACTTCTCGAGAAGATCATAACGGCTAAA 180 Query 781 CGAGAGGAGATCAA 794 ||||||||||||| Sbjct 181 AGAGAGGAGATCAA 194 > Ahg925517 jgi|Araly1|925517|scaffold_201078.1 Length=671 Score = 939 bits (508), Expect = 0.0 Identities = 562/588 (96%), Gaps = 3/588 (1%) Strand=Plus/Plus Query 927 TTTCTTGAT--AGCGGCAAGAGATACAACAAGTTCAGCACTCACTTGGTTCTTCTGGCTT 984 ||||||| | || ||||||||| |||| ||||||||| ||||||||||||||||||||| Sbjct 65 TTTCTTG-TGGAGTGGCAAGAGACACAATAAGTTCAGCTCTCACTTGGTTCTTCTGGCTT 123 Query 985 ATGTCCAAGAACCCTGAGGCAATAAACAAGATCCGACAAGAGGTTAACAAGAAGATGCCG 1044 |||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||| Sbjct 124 CTGTCCAAGAACCCTGAAGCAATGAACAAGATTCGACAAGAGGTTAACAAGAAGATGCCG 183 Query 1045 AGGTTTGATCCCGCAGATTTAGAAAAGCTCGTGTATCTACACGGTGCCGTGTGTGAGACG 1104 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 184 AGGTTTGATCCCGCAGATTTAGACAAGCTCGTGTATCTACACGGTGCCGTGTGTGAGACG 243 Query 1105 CTAAGGTTATACCCACCAGTTCCATTTAACCACAAGTCACCGGCAAAGCCAGACGTACTT 1164 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct 244 CTAAGGTTATACCCACCAGTCCCATTTAACCACAAGTCACCGGCAAAGCCAGACGTGCTT 303 Query 1165 CCAAGTGGGCATAGAGTAGATGAGAAATGGAAGATTGTCATATCTATGTATGCATTAGGG 1224 ||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct 304 CCAAGTGGGCATAAAGTCGATGAGAATTGGAAGATTGTCATATCTATGTATGCATTAGGG 363 Query 1225 AGGATGAAATCTGTTTGGGGAGATGACGCAGAAGATTTCAGACCAGAGAGATGGATTTCA 1284 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 364 AGGATGAAATCTGTTTGGGGAGATGACGCGGAAGATTTCAGACCAGAGAGATGGATTTCA 423 Query 1285 GACAGTGGAAGGTTAAAACATGAACCTTCATATAAGTTCTTGGCGTTTAACGCCGGTCCA 1344 ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct 424 TACAGTGGAAGGTTAAAACAAGAACCTTCATATAAGTTCTTGGCGTTTAACGCTGGTCCA 483 Query 1345 AGAGCTTGCTTGGGGAAAAAGTTAACGTTCTTACAGATGAAGACAGTGGCTGCGGAAATC 1404 |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 484 AGAGCTTGCTTGGGAAAAAAGTTAACGTTCTTGCAGATGAAGACAGTGGCTGCGGAAATC 543 Query 1405 ATACGAAACTATGACATCAAGGTCGTTGAAGGGCACAAAACCGAACCAGTTCCTTCTGTT 1464 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 544 ATACGAAACTATGACATCAAGGTCGTTGAAGGGCACAAAACCGAACCTGTTCCTTCTGTT 603 Query 1465 CTTTTTCGTATGCAACATGGTCTCAAAGTTAATATCACTAGGATCTAG 1512 |||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct 604 CTTTTTCGCATGCAACATGGTCTCAAAGTTAATATCACTAAGATCTAG 651 > Ahg932132 jgi|Araly1|932132|scaffold_400120.1 Length=1574 Score = 255 bits (138), Expect = 5e-67 Identities = 424/557 (76%), Gaps = 39/557 (7%) Strand=Plus/Plus Query 964 CTCACTTGGTTCT-TCTGGCTTATGTCCAAGAACCCTGAGGCAATAAACAAGATCCGACA 1022 ||||||||||||| | |||||| | |||||||||||||| || | | ||||||||| || Sbjct 978 CTCACTTGGTTCTGT-TGGCTTCTCTCCAAGAACCCTGAAGCTGTGACCAAGATCCGCCA 1036 Query 1023 AGAGGT-TA-AC-AA--GA--A-GATGCC-G-A-G-GTTT-GATCCCGCAGAT-TTAGAA 1068 |||| | | || || | | ||| || | | | |||| ||| | | | || ||| || Sbjct 1037 AGAGATCAACACAAATCTACCAGGAT-CCGGAATGAGTTTAGATGCAG-ACATGTTA-AA 1093 Query 1069 -AAGCTCGTGTATCTACACGGTGCCGTGTGTGAGA-CGCTAAGGTTATACCCACCAGTTC 1126 ||| | |||||| |||| ||||| ||||||| | | ||| | | ||| | ||| | | Sbjct 1094 CAAGATGGTGTATTTACATGGTGCATTGTGTGA-ATCACTACGCCTCTACGCTCCAATCC 1152 Query 1127 CATT-TAACCACAAGTCACCGGCAAAGCCAGACGTACTTCCAAGTGGGCATAGAGTAGAT 1185 |||| | | | ||| | || ||| | ||| || ||||||||||| || | ||| ||| Sbjct 1153 CATTCGAGCGA-AAGACTCCCATAAAACAAGATGTGCTTCCAAGTGGACACAAAGTCGAT 1211 Query 1186 GAGAAA-TGGAAGATTGTCATATCTATGTATGCATTAGGGAGGATGAAATCTGTTTGGGG 1244 | ||| ||||||||| | | ||| | |||||||| ||||||||||| |||| ||||| Sbjct 1212 G-CAAATTGGAAGATTTTGTTCTCTGTCTATGCATTGGGGAGGATGAAGGCTGTGTGGGG 1270 Query 1245 AGATGACGCA-GAAGATTTCAGACCAGAGAGATGGATTTC--AGA-CAGTGGAAGG-TTA 1299 ||| |||||| | || |||| |||||||||||||||||| ||| | ||| ||| ||| Sbjct 1271 AGAAGACGCATG-TGAATTCAAACCAGAGAGATGGATTTCTGAGAGAAATGG-AGGCTTA 1328 Query 1300 AAACATGAACCTTCATAT-AAGTTCTTGGCGTTTAACGCCGGTCCAAGAGCTTGCTTGGG 1358 || |||||||| || | | |||||||| | |||||| | ||||||||| ||||||||| Sbjct 1329 AAGCATGAACCATC-TTTCAAGTTCTTCGTGTTTAATTCTGGTCCAAGAAATTGCTTGGG 1387 Query 1359 GAAAAAG-TTAACGTTCTTACAGATGAAGACAGTGGCTGCGGAAATCATACGAAACTATG 1417 | ||||| ||| | ||||| |||||||||||||||||| || || |||||||| |||| Sbjct 1388 G-AAAAGTTTATCTTTCTTGCAGATGAAGACAGTGGCTATTGAGATTATACGAAATTATG 1446 Query 1418 ACATCAAGGTCGTTGAAGGGCACAAAACCGAACCAG-TTCCTTCTGTTCTTTTTCGTATG 1476 ||||||||||||||||||||||||| | ||| |||| ||| ||| | | ||| ||| Sbjct 1447 ACATCAAGGTCGTTGAAGGGCACAAGATCGAGCCAGCTTC-TTCCATAGTCCTTCACATG 1505 Query 1477 CAACATGGTCTCAAAGT 1493 ||||||| |||||||| Sbjct 1506 AAACATGGCCTCAAAGT 1522 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 56602104070 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5