BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G66170.1
Length=2495
Score E
Sequences producing significant alignments: (Bits) Value
Ahg925764 jgi|Araly1|925764|scaffold_201325.1 2955 0.0
Ahg941284 jgi|Araly1|941284|scaffold_601828.1 503 3e-141
Ahg923283 jgi|Araly1|923283|scaffold_104564.1 492 6e-138
Ahg931218 jgi|Araly1|931218|scaffold_303675.1 411 2e-113
Ahg923388 jgi|Araly1|923388|scaffold_104669.1 337 3e-91
Ahg484096 jgi|Araly1|484096|fgenesh2_kg.5__88__AT2G01810.1 71.3 3e-11
> Ahg925764 jgi|Araly1|925764|scaffold_201325.1
Length=2159
Score = 2955 bits (1600), Expect = 0.0
Identities = 1982/2167 (91%), Gaps = 24/2167 (1%)
Strand=Plus/Plus
Query 252 GAACTCTATCATCACTCAAAAATGCCAGTCCCAATCATCGAAACGTGTCGTAAGAGAAAA 311
|||||| |||||||||||| |||||||||||||||||||||||| || ||||||||||||
Sbjct 1 GAACTCAATCATCACTCAATAATGCCAGTCCCAATCATCGAAACTTGCCGTAAGAGAAAA 60
Query 312 CGGAAGCCAAAAGTTTACAATCTACAACGATTCGGGGAAGATGGGTTTCCGATACAACGG 371
|| ||||| | |||||||||||| ||||||||||| |||||||||||||||||||| |||
Sbjct 61 CGAAAGCCGAGAGTTTACAATCTTCAACGATTCGGAGAAGATGGGTTTCCGATACACCGG 120
Query 372 AACGGAGCTTTTCGCGATCAAATTAGGGtttttttACGGGACT-GTGCGGAGATTGAAGA 430
|||||| |||| || |||||||||||||||||||||||||| | |||||||| |||||||
Sbjct 121 AACGGAACTTTCCGGGATCAAATTAGGGTTTTTTTACGGGA-TGGTGCGGAGGTTGAAGA 179
Query 431 TTATGATATCCGCGGTATGACTGTGTGGTGTACTCT-TTTAAGCCATGAGACGAAGAGTT 489
||||||| |||| |||||| |||||||||||||||| ||| |||||||||||||||||||
Sbjct 180 TTATGATCTCCGTGGTATGCCTGTGTGGTGTACTCTCTTT-AGCCATGAGACGAAGAGTT 238
Query 490 CTCTGATTCC-GTTGTACATTGTTGAAGAAAATGTGAAACATTCATCGGAACCCTATTGC 548
|||||||||| || |||||||||||||||||||||| || ||| | ||||| || |||
Sbjct 239 CTCTGATTCCACTT-TACATTGTTGAAGAAAATGTGATTCACTCACCAGAACCATACTGC 297
Query 549 GATCACTGTCGTTGCACAGGTTGGAGTAACCATTTTGTGTCGAAGAGAAAATATCACTTC 608
||||||||||| ||||||||||||||||| ||||||||||| |||||||| || ||||||
Sbjct 298 GATCACTGTCGATGCACAGGTTGGAGTAATCATTTTGTGTCCAAGAGAAAGTACCACTTC 357
Query 609 ATTATTCCGATTGATACTGAGTGGAGTTTGCCATTAGAAGATGATGCTTTTGATTCTCAA 668
|||||||||| |||| ||||||||||||||||||||||||| ||||||||||||| ||||
Sbjct 358 ATTATTCCGAATGATTCTGAGTGGAGTTTGCCATTAGAAGAGGATGCTTTTGATTTTCAA 417
Query 669 TCCCATGTTTTACATGGTTTGATTCATTGCAATGGTTTTGGTCATTTGGTATGTGTCAAT 728
| |||| ||||||||||||||||||||| ||||||||||| |||||| |||||||||||
Sbjct 418 ACTCATGCTTTACATGGTTTGATTCATTGTAATGGTTTTGGACATTTGTTATGTGTCAAT 477
Query 729 GGTATGGAAAGTGGTTCTAAGTACTTATGCGGAAGAGAGATTGTGGACTTTTGGGATCGG 788
||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 478 GGTATGGAAGGAGGTTCAAAGTACTTATGCGGAAGAGAGATTGTGGACTTTTGGGATCGG 537
Query 789 CTTTGTAATAGTCTCGGAGCAAGGATGATTACTGTTGAAGATTTGGCTAAGAAGAG-GTC 847
||||||||||||| ||||||||||||||||| |||||||||||| |||||||||| | |
Sbjct 538 ATTTGTAATAGTCTTGGAGCAAGGATGATTACGGTTGAAGATTTGTCTAAGAAGAGAG-C 596
Query 848 TGTGGAACTGAGGTTGTTGTATGGTGTTGCTTATGGTCACTCTTGGTTTGGAAGATGGGG 907
| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 597 TTTGGAATTGAGGTTGTTGTATGGTGTTGCTTATGGTCACTCTTGGTTTGGTCGATGGGG 656
Query 908 ATATAAGTTCTGTTGTGGGAGTTTTGGTGTGACCAAGAATGAGTATGAGAATGCCATTGA 967
||||||||| ||| ||||||||| |||||||| |||| ||| ||||||||||| |||||
Sbjct 657 ATATAAGTTTTGTCGTGGGAGTTATGGTGTGAGTAAGAGTGATTATGAGAATGCTATTGA 716
Query 968 GGC-TCTTGGTTCACTTGAGATTGATCAAATCGAGTTTGATTTCGGTGAGCTTCGACAAT 1026
|| |||||| ||||||||| |||||||||| |||| ||||||| |||||||||||||||
Sbjct 717 -GCTTCTTGGCTCACTTGAGCTTGATCAAATTGAGTGTGATTTCAGTGAGCTTCGACAAT 775
Query 1027 CTAAGGAGATCAATCAGGTTTTTCGATATTACAGAGAAATGAGTGAAGGACACTTGAAGA 1086
||||| |||||| |||||| |||||||||| ||||| ||||||||||| || |||||||
Sbjct 776 TTAAGGTGATCAAACAGGTTATTCGATATTATAGAGATATGAGTGAAGGCCATTTGAAGA 835
Query 1087 CTTTCAGAGATCTTTTGCGTTTTATGCTCATTATAAAGTCTCATGCTTCTCCTCAAAAGC 1146
| | |||||||||||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct 836 CAGTGAGAGATCTTTTGCGGTTTATGCTCATTATTAAGTCTCATGCTTCTCCTCAAAAGC 895
Query 1147 TTCTTCCTGTGACTCCTCCTCTCTTGACAGATTCTCCTCATCAGAAGAGATCAAGCCGAT 1206
||||||||| |||||||||||||||||| |||||||||||||| || ||||||| | |
Sbjct 896 TTCTTCCTGCGACTCCTCCTCTCTTGACTGATTCTCCTCATCAAAAAAGATCAAATAGGT 955
Query 1207 TGCTTTTGAAGAAAAGTGATGTTGCGGATAATGACAAGTCTCCGAAATATAGGAACTATA 1266
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 956 TGCTTTTGAAGAAAAGCGATGTTGCGGATAATGACAAGTCTCCGAAATATAGGAACTATA 1015
Query 1267 G-TACTGTGGCTGCAAATTTGGGTAGTAGATGGCCTGTGAGGAGACTAATATTTGCAGCT 1325
| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1016 GCT-CTGTGGCTGCAAATTTGGGTAGTAGATGGCCTGTGAGGAGACTAATATTTGCAGCT 1074
Query 1326 GAAGTGATAGTAGAGTCACTGAAAGAGATGAAAGCGTTGAAGCAGAACGGTATGACTCGA 1385
||||||||||| ||||||||||||||||||||||| ||||||| ||| |||||||||||
Sbjct 1075 GAAGTGATAGTGGAGTCACTGAAAGAGATGAAAGCATTGAAGCCGAATGGTATGACTCGG 1134
Query 1386 CAAGATGTTAGGGATTCAGCTAGATTGCATATTGGAGATACCGGTCTGCTTGATTACGTG 1445
||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct 1135 CAAGATGTTAGGGATTCAGCTAGATTGCATATTGGAGATACTGGTCTGCTGGATTACGTG 1194
Query 1446 CTGAAGTCAATGAACAATGTGGTTGTTGGGGATGTTTTGGTTCGACGTTATGTTGATCCC 1505
||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1195 TTGAAGTCGATGCACAATGTGGTCGTTGGGGATGTTTTGGTTCGACGTTATGTTGATCCC 1254
Query 1506 ATTACACGGATCCTGCACTATACAATACAGGATCTTGATGATGCGGTGAAAGCCAAAGAA 1565
|||||||| || |||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct 1255 ATTACACGTATTCTGCACTATACAATACAGGAGCTTGATGATGCGGTGAAAGCCATAGAA 1314
Query 1566 CCGAAGAAAAAAGAAGCTGTTGTGCTAGAGGAGATTACTCCGTTGAGGATTCTTACTCCA 1625
||||||||| |||||||||| |||||||||||||||||||| ||||||||| ||||||||
Sbjct 1315 CCGAAGAAAGAAGAAGCTGTGGTGCTAGAGGAGATTACTCCTTTGAGGATTTTTACTCCA 1374
Query 1626 TTGAAACCTGGAGCTGACGTTTATGGAGATCTGTTGTTACTATACACAAATGTGCTGTTG 1685
|||||| |||||||||| |||||||||||| |||||||||| |||||||||||| |||||
Sbjct 1375 TTGAAAGCTGGAGCTGATGTTTATGGAGATTTGTTGTTACTGTACACAAATGTGTTGTTG 1434
Query 1686 AACTATCCAGAATCTGAGCTAGTGAGATCTGCAACTCAAGCAATCTTAGACT-CTAAACA 1744
||||||||||| ||||||||||||||||||||||||||||||||||||||| | || ||
Sbjct 1435 AACTATCCAGACTCTGAGCTAGTGAGATCTGCAACTCAAGCAATCTTAGACAGC-AAGCA 1493
Query 1745 CTTCATCAAAGAGTGGCCTATATGGGAC-A-A-CAATGACACAGTCTTGCAATTTCTTTG 1801
|||| | || ||||||||| |||||||| | | |||||||| ||| || |||||| ||||
Sbjct 1494 CTTCGTTAAGGAGTGGCCTTTATGGGACGACAACAATGACAAAGTATTACAATTTGTTTG 1553
Query 1802 CCGTATCAATCCAAGTTTGGTTGATGTGAGATCCGAACAGACCACAGAGCTGCCTCCAGG 1861
||||||||||||||||||| ||||| ||||||| ||||||| ||||||||| ||||| ||
Sbjct 1554 CCGTATCAATCCAAGTTTGATTGATTTGAGATCAGAACAGATCACAGAGCTACCTCCTGG 1613
Query 1862 CGAATTAGTCACAGTGCCATTACAAGCTACAGTCTATGATCTAAAGCAAGCCATTGAAGA 1921
|| ||||| ||||| ||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct 1614 TGACTTAGTTACAGTACCATTACAAGCCACAGTCTTTGATCTAAAGCAAGCCATTGAAGA 1673
Query 1922 GACCTTCAGAGATACTTACTGCATCTTGTCAAATTTTGTAGTGACTGAGATTGATGAGGT 1981
|| |||||||||||||||||||||||||||||| |||| |||| ||||||||| |||||
Sbjct 1674 CACTTTCAGAGATACTTACTGCATCTTGTCAAATCTTGTGGTGAGTGAGATTGAAGAGGT 1733
Query 1982 TGAAG-AAGATATGAGTTTGATCG-GTTCTTGTTCTGCTTTAACAGTGA-GAGGTCATGG 2038
| ||| |||| |||||||||| || || ||||||||||||||||||||| | ||||||||
Sbjct 1734 T-AAGGAAGACATGAGTTTGACCGAGT-CTTGTTCTGCTTTAACAGTGACG-GGTCATGG 1790
Query 2039 GATAGATTTGGAATCAAAACTCAAGTGTCAAGGTGGATGTGATACATGGATGGTGAAATG 2098
||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1791 GATTGATTTGGAGTCAAAACTCAAGTGTCAAGGTGGATGTGATACATGGATGGTGAAATG 1850
Query 2099 TATTTGCAGAGCTAGAGATGATGATGGCGAGAGGATGATATCTTGTGATGTTTGTGAGGT 2158
||||||||| |||||||| |||||||||||||| |||||||| |||||||||||||| ||
Sbjct 1851 TATTTGCAGGGCTAGAGACGATGATGGCGAGAGAATGATATCGTGTGATGTTTGTGAAGT 1910
Query 2159 ATGGCAACATACACGATGTTGTGGGATTGATGATTCAGATACTTTGCCTCCACTTTTTGT 2218
||||||||||||||||||||| || || ||||||||||||||||| ||||||||||||||
Sbjct 1911 ATGGCAACATACACGATGTTGCGGTATCGATGATTCAGATACTTTACCTCCACTTTTTGT 1970
Query 2219 TTGTTCGAATTGCTGTGAAGAATTTGCAGAGCAACAGAGGAAAGTGCTGCAGCCAAAGTA 2278
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1971 TTGTTCGAATTGCTGTGAAGAATTTGCAGAGCAACAGAGGAAAGTGTTGCAGCCAAAGTA 2030
Query 2279 TGAGTTTCCAAGTTCAGAGAATGTGTTTTTGCTTGAATCTGCAGATGATTTCTTTGGAGA 2338
||||||||||||||| ||||| ||||| || ||||||||||||||||||||||||||||
Sbjct 2031 TGAGTTTCCAAGTTCTGAGAACATGTTTCTGATTGAATCTGCAGATGATTTCTTTGGAGA 2090
Query 2339 TCAGAGATGTCTTGGTATGATTTTTCCTGAAGAAAACTATCTTTTGTAAAGTCAGTTTTT 2398
|||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||
Sbjct 2091 TCAGAGATGTCTTGGTATGATTTTTCCTGAAGAAAATTATCTCTTGTAAAGTCA-TTTTT 2149
Query 2399 GGATCAA 2405
||||||
Sbjct 2150 AGATCAA 2156
> Ahg941284 jgi|Araly1|941284|scaffold_601828.1
Length=438
Score = 503 bits (272), Expect = 3e-141
Identities = 381/434 (88%), Gaps = 6/434 (1%)
Strand=Plus/Plus
Query 2025 GTGAGAGGTCATGGGATAGATTTGGAATCAAAACTCAAGTGTCAAGGTGGATGTGATACA 2084
||||| ||||||| ||| ||| ||||||| ||||| |||| ||||||||||||||||| |
Sbjct 1 GTGAGGGGTCATGAGATTGATATGGAATCGAAACTGAAGTTTCAAGGTGGATGTGATATA 60
Query 2085 TGGATGGTGAAATGTATTTGCAGAGCTAGAGATGATGATGGCGAGAGGATGATATCTTGT 2144
|||||||||| |||| ||||||| ||||||||||||||||| ||||| |||||| | |||
Sbjct 61 TGGATGGTGAGATGTGTTTGCAGTGCTAGAGATGATGATGGTGAGAGAATGATAGCATGT 120
Query 2145 GATGTTTGTGAGGTATGGCAACATACACGATGTTGTGGGATTGATGATTCAGATACTTTG 2204
||||| |||||| ||||||| || ||| |||||||||||||||||||| |||||||||||
Sbjct 121 GATGTATGTGAGATATGGCAGCACACAAGATGTTGTGGGATTGATGATACAGATACTTTG 180
Query 2205 CCTCCACTTTTTGTTTGTTCGAATTGCTGTGAAGAATTTGCAGAGCAACAGAGGAAAGTG 2264
|||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||
Sbjct 181 CCTCCACTTTTTGTTTGTTCTAATTGTTGTGAAGAATTTGCAGAGCAACAGAAGAAAGTG 240
Query 2265 CTGCAGCCAAAGTATGAGTTTCCAAGTTCAGAGAATGTGTTTTTGCTTGAATCTGCAGAT 2324
|||||||||||||||||||||||||| |||||||||||||| || ||||||| | |||
Sbjct 241 TTGCAGCCAAAGTATGAGTTTCCAAGTGCAGAGAATGTGTTTCTGATTGAATCAGGTGAT 300
Query 2325 GATTTCTTTGGAG-A--TCAGAGATGTCTTGGTATGATTTTTCCTGAAGAAAACTATCTT 2381
|||| |||||||| | | |||||| ||||||||||||||||||||||||||||| |||
Sbjct 301 GATTACTTTGGAGGAGATGAGAGATCTCTTGGTATGATTTTTCCTGAAGAAAACTTTCTC 360
Query 2382 TTGTAAAGTCAGTTTTTGGATCAAACTTTGTAGATAA-TCAATTCTTTTGTAAACAAAAC 2440
|| ||| | |||||||||||||| |||| ||||| |||||||||||||||| ||||
Sbjct 361 TTACAAAACCCCTTTTTGGATCAAACATTGTGGATAAATCAATTCTTTTGTAAATGAAAC 420
Query 2441 CAA-ATTGTATATG 2453
| ||||||||||
Sbjct 421 -ATGATTGTATATG 433
> Ahg923283 jgi|Araly1|923283|scaffold_104564.1
Length=438
Score = 492 bits (266), Expect = 6e-138
Identities = 379/434 (87%), Gaps = 6/434 (1%)
Strand=Plus/Plus
Query 2025 GTGAGAGGTCATGGGATAGATTTGGAATCAAAACTCAAGTGTCAAGGTGGATGTGATACA 2084
||||| ||||||| ||| ||| ||||||| ||||| |||| ||||||||||||||||| |
Sbjct 1 GTGAGGGGTCATGAGATTGATATGGAATCGAAACTGAAGTTTCAAGGTGGATGTGATATA 60
Query 2085 TGGATGGTGAAATGTATTTGCAGAGCTAGAGATGATGATGGCGAGAGGATGATATCTTGT 2144
|||||||||| |||| ||||||| ||||||||||||||||| ||||| |||||| | |||
Sbjct 61 TGGATGGTGAGATGTGTTTGCAGTGCTAGAGATGATGATGGTGAGAGAATGATAGCATGT 120
Query 2145 GATGTTTGTGAGGTATGGCAACATACACGATGTTGTGGGATTGATGATTCAGATACTTTG 2204
||||| |||||| ||||||| || ||| |||||||||||||||||||| || ||||||||
Sbjct 121 GATGTATGTGAGATATGGCAGCACACAAGATGTTGTGGGATTGATGATACAAATACTTTG 180
Query 2205 CCTCCACTTTTTGTTTGTTCGAATTGCTGTGAAGAATTTGCAGAGCAACAGAGGAAAGTG 2264
|||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||
Sbjct 181 CCTCCACTTTTTGTTTGTTCTAATTGTTGTGAAGAATTTGCAGAGCAACAGAAGAAAGTG 240
Query 2265 CTGCAGCCAAAGTATGAGTTTCCAAGTTCAGAGAATGTGTTTTTGCTTGAATCTGCAGAT 2324
|||||||||||||||||||||||||| |||||||||||||| || ||||||| | |||
Sbjct 241 TTGCAGCCAAAGTATGAGTTTCCAAGTGCAGAGAATGTGTTTCTGATTGAATCAGGTGAT 300
Query 2325 GATTTCTTTGGAG-A--TCAGAGATGTCTTGGTATGATTTTTCCTGAAGAAAACTATCTT 2381
|||| |||||||| | | |||||| ||||||||||||||||| ||||||||||| |||
Sbjct 301 GATTACTTTGGAGGAGATGAGAGATCTCTTGGTATGATTTTTCTTGAAGAAAACTTTCTC 360
Query 2382 TTGTAAAGTCAGTTTTTGGATCAAACTTTGTAGATAA-TCAATTCTTTTGTAAACAAAAC 2440
|| ||| | |||||||||||||| |||| ||||| |||||||||||||||| ||||
Sbjct 361 TTACAAAACCCCTTTTTGGATCAAACATTGTGGATAAATCAATTCTTTTGTAAATGAAAC 420
Query 2441 CAA-ATTGTATATG 2453
| ||||||||||
Sbjct 421 -ATGATTGTATATG 433
> Ahg931218 jgi|Araly1|931218|scaffold_303675.1
Length=427
Score = 411 bits (222), Expect = 2e-113
Identities = 309/351 (88%), Gaps = 6/351 (2%)
Strand=Plus/Plus
Query 2108 AGCTAGAGATGATGATGGCGAGAGGATGATATCTTGTGATGTTTGTGAGGTATGGCAACA 2167
|||||||||||||||||| ||||| |||||| | |||||||| |||||| ||||||| ||
Sbjct 73 AGCTAGAGATGATGATGGTGAGAGAATGATAGCATGTGATGTATGTGAGATATGGCAGCA 132
Query 2168 TACACGATGTTGTGGGATTGATGATTCAGATACTTTGCCTCCACTTTTTGTTTGTTCGAA 2227
||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||
Sbjct 133 CACAAGATGTTGTGGGATTGATGATACAGATACTTTGCCTCCACTTTTTGTTTGTTCTAA 192
Query 2228 TTGCTGTGAAGAATTTGCAGAGCAACAGAGGAAAGTGCTGCAGCCAAAGTATGAGTTTCC 2287
||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||
Sbjct 193 TTGTTGTGAAGAATTTGCAGAGCAACAGAAGAAAGTGTTGCAGCCAAAGTATGAGTTTCC 252
Query 2288 AAGTTCAGAGAATGTGTTTTTGCTTGAATCTGCAGATGATTTCTTTGGAG-A--TCAGAG 2344
|||| |||||||||||||| || ||||||| | ||||||| |||||||| | | ||||
Sbjct 253 AAGTGCAGAGAATGTGTTTCTGATTGAATCAGGTGATGATTACTTTGGAGGAGATGAGAG 312
Query 2345 ATGTCTTGGTATGATTTTTCCTGAAGAAAACTATCTTTTGTAAAGTCAGTTTTTGGATCA 2404
|| ||||||||||||||||||||||||||||| ||| || ||| | |||||||||||
Sbjct 313 ATCTCTTGGTATGATTTTTCCTGAAGAAAACTTTCTCTTACAAAACCCCTTTTTGGATCA 372
Query 2405 AACTTTGTAGATAA-TCAATTCTTTTGTAAACAAAACCAA-ATTGTATATG 2453
||| |||| ||||| |||||||||||||||| |||| | ||||||||||
Sbjct 373 AACATTGTGGATAAATCAATTCTTTTGTAAATGAAAC-ATGATTGTATATG 422
> Ahg923388 jgi|Araly1|923388|scaffold_104669.1
Length=576
Score = 337 bits (182), Expect = 3e-91
Identities = 255/290 (88%), Gaps = 6/290 (2%)
Strand=Plus/Plus
Query 2169 ACACGATGTTGTGGGATTGATGATTCAGATACTTTGCCTCCACTTTTTGTTTGTTCGAAT 2228
||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||
Sbjct 283 ACAAGATGTTGTGGGATTGATGATACAGATACTTTGCCTCCACTTTTTGTTTGTTCTAAT 342
Query 2229 TGCTGTGAAGAATTTGCAGAGCAACAGAGGAAAGTGCTGCAGCCAAAGTATGAGTTTCCA 2288
|| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct 343 TGTTGTGAAGAATTTGCAGAGCAACAGAAGAAAGTGTTGCAGCCAAAGTATGAGTTTCCA 402
Query 2289 AGTTCAGAGAATGTGTTTTTGCTTGAATCTGCAGATGATTTCTTTGGAG-A--TCAGAGA 2345
||| |||||||||||||| || ||||||| | ||||||| |||||||| | | |||||
Sbjct 403 AGTGCAGAGAATGTGTTTCTGATTGAATCAGGTGATGATTACTTTGGAGGAGATGAGAGA 462
Query 2346 TGTCTTGGTATGATTTTTCCTGAAGAAAACTATCTTTTGTAAAGTCAGTTTTTGGATCAA 2405
| ||||||||||||||||| ||||||||||| ||| || ||| | ||||||||||||
Sbjct 463 TCTCTTGGTATGATTTTTCTTGAAGAAAACTTTCTCTTACAAAACCCCTTTTTGGATCAA 522
Query 2406 ACTTTGTAGATAA-TCAATTCTTTTGTAAACAAAACCAA-ATTGTATATG 2453
|| |||| ||||| |||||||||||||||| |||| | ||||||||||
Sbjct 523 ACATTGTGGATAAATCAATTCTTTTGTAAATGAAAC-ATGATTGTATATG 571
> Ahg484096 jgi|Araly1|484096|fgenesh2_kg.5__88__AT2G01810.1
Length=2254
Score = 71.3 bits (38), Expect = 3e-11
Identities = 44/47 (94%), Gaps = 0/47 (0%)
Strand=Plus/Plus
Query 681 CATGGTTTGATTCATTGCAATGGTTTTGGTCATTTGGTATGTGTCAA 727
|||||||||||||||||||||||||||||||||||| | ||| ||||
Sbjct 433 CATGGTTTGATTCATTGCAATGGTTTTGGTCATTTGCTTTGTATCAA 479
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 94044814905
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5