BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G66520.1
Length=1321
Score E
Sequences producing significant alignments: (Bits) Value
Ahg925692 jgi|Araly1|925692|scaffold_201253.1 1738 0.0
Ahg908162 jgi|Araly1|908162|Al_scaffold_0002_1243 1622 0.0
Ahg908032 jgi|Araly1|908032|Al_scaffold_0002_1113 575 3e-163
Ahg908155 jgi|Araly1|908155|Al_scaffold_0002_1236 507 1e-142
Ahg925834 jgi|Araly1|925834|scaffold_201395.1 353 2e-96
Ahg475684 jgi|Araly1|475684|fgenesh2_kg.2__814__AT1G66510.2 143 4e-33
> Ahg925692 jgi|Araly1|925692|scaffold_201253.1
Length=1109
Score = 1738 bits (941), Expect = 0.0
Identities = 1051/1106 (95%), Gaps = 0/1106 (0%)
Strand=Plus/Plus
Query 31 GAAACCATTGAAGCAGCAGCAATGATACTACGTCGTTTCATCTGCTACAACGCTTCTTCA 90
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1 GAAACCATTGAAGCAGCAACAATGATACTACGTCGTTTCATCTGCTACAACGCTTCTTCA 60
Query 91 ACTGTTTCATCTATAGCTCCATCACCGAAGAAGAAGCCTCTCATCTTCTTAGGCTCTCCT 150
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct 61 ACTGTTTCATCTATAGCTCCGTCTCCGAAGAAGAAGCCTCTCATCTTCTTAGGCTCTCCT 120
Query 151 CAGGTCTCCGTGAGTGTGCTTGAAGCTCTTTTCAATGCATCTAATGCTCCAAACTCTTCC 210
||||| || |||| |||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct 121 CAGGTTTCTGTGACTGTGCTTGAAGCTCTTTTCAATGCATCTGCTGCACCAAACTCTTCC 180
Query 211 TTCGAGGTTGCAGGTATTGTTACACAGCCTCCATCAAGGAGAGATAGGGGTAAAAAAGTG 270
|| ||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||
Sbjct 181 TTTGAGGTTGCAGGCATTGTTACACAGCCTCCATCAAGGAGAGATCGGGGTAGAAAAGTG 240
Query 271 TTGCCTTCACCAGTAGCGCAATACGCTCTTGATAAAGGCTTACCTTCTGATCTCATTTTC 330
|||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 TTGCCTTCGCCTGTAGCGCAATACGCTCTTGATAAAGGCTTACCTTCTGATCTCATTTTC 300
Query 331 TCCCCTGAGAAGGCAGGAGATGAAGCATTTTTATCGGCTTTAAGAGAGTTGCAACCTGAG 390
||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct 301 TCCCCTGAGAAGGCAGGAGATGAAGCATTCTTATCGGCTTTACGAGAGTTGCAACCTGAG 360
Query 391 CTTTGTATTACAGCAGCTTATGGGAATATTTTGCCTACTAAGTTCCTTAAGATTCCGGTA 450
||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||
Sbjct 361 CTTTGTATTACAGCAGCTTATGGGAATATATTGCCTACTAAGTTCCTTAAAATTCCATTA 420
Query 451 CATGGGACAGTGAACATACACCCAAGTTTGCTGCCGCTGTACCGTGGTGCAGCTCCAGTT 510
|||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct 421 CATGGGACAGTGAACATACACCCAAGTTTGTTGCCCCTGTACCGTGGTGCAGCTCCAGTT 480
Query 511 CAAAGAGCATTACAGGATGGTGTCCCGGAAACAGGAGTATCATTAGCATTTACTGTGCGT 570
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 481 CAAAGAGCATTACAGGATGGTGTCCCGGAAACAGGAGTATCATTAGCATTTACGGTGCGA 540
Query 571 AAGTTAGATGCAGGGCCAGTGATTGCCTCTAAGAGGTTCCAAGTGGATGATCTAATAAAG 630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 541 AAGTTAGATGCAGGGCCAGTGATTGCCTCTAAGAGGTTCCAAGTGGATGATCTAATAAAG 600
Query 631 GCACCAGAACTACTCTCGTTCCTATTTTCTGAAGGTTCTAATCTTCTTATCCGTGAACTT 690
||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct 601 GCACCAGAACTGCTCTCGTTCCTATTTTCTGAAGGTTCAAAGCTTCTTATCCGTGAACTT 660
Query 691 CCCTCGATATTTGATGGGTCCGCAAAATCAAAAGCAGCTCCCCAAGATGATTCTAAAGCT 750
||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 661 CCCTCAATATTTGATGGGTCTGCAAAATCAAAAGCAGCTCCCCAAGATGATTCTAAAGCT 720
Query 751 ACCTTAGCTCCAAAGATAGCTCCAGATGAGGCTTGGCTCTCTTTTGACCAGGAAGCTTTT 810
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 721 ACCTTAGCTCCAAAGATAGCTCCAGATGAGGCTTGGCTCTCTTTTGACGAGGAAGCTTTT 780
Query 811 GTTCTACATAACAAGGTTCGTGCATTTGCAGGATGGCCGGGAACACGAGCAAAAGTTGTA 870
|||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||
Sbjct 781 GTTCTACATAACAAGGTTCGTGCATTCGCAGGATGGCCGGGAACAAGAGCTAAAGTTGTA 840
Query 871 GTCCTTGATGAGAAAAGCGGTCAGCAAAATGTGCTAGAGCTTAAAATTATGTCCACTCGA 930
||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 841 GTCCTCGATGACAAAAGCGGTCAGCAAAATGTGCTAGAGCTTAAAATCATGTCCACTCGA 900
Query 931 GTATGCAAAGATCTGGAAATTCAGGATAGTGAACAAGATTATGTAACTTTCAAGAAAGGT 990
|||||||||||||||||||| || ||| ||| ||||||||||||||||||||||||||||
Sbjct 901 GTATGCAAAGATCTGGAAATCCAAGATGGTGGACAAGATTATGTAACTTTCAAGAAAGGT 960
Query 991 TCACTAATATTTCCCTGCAGAGGAGGTACAGCTTTAGAGGTACTGGAAGTCCAGCTTCCT 1050
||| | | |||||||| |||||||||| |||||||||||||| |||||||||||||||
Sbjct 961 TCATTGGTGTTTCCCTGTGGAGGAGGTACTGCTTTAGAGGTACTAGAAGTCCAGCTTCCT 1020
Query 1051 GGTAAGAAAGCCATCAACGCAGCTGCTTTTTGGAATGGCTTGAGAGGTCAAAAGCTGAAG 1110
||||| ||||| |||||||| || || |||||||||||||||||||||||||||||||||
Sbjct 1021 GGTAAAAAAGCTATCAACGCGGCCGCCTTTTGGAATGGCTTGAGAGGTCAAAAGCTGAAG 1080
Query 1111 AAGCTATGAAGACAAAGACTGAAACA 1136
|||||||||||||| |||||||||||
Sbjct 1081 AAGCTATGAAGACAGAGACTGAAACA 1106
> Ahg908162 jgi|Araly1|908162|Al_scaffold_0002_1243
Length=1068
Score = 1622 bits (878), Expect = 0.0
Identities = 980/1031 (95%), Gaps = 0/1031 (0%)
Strand=Plus/Plus
Query 52 ATGATACTACGTCGTTTCATCTGCTACAACGCTTCTTCAACTGTTTCATCTATAGCTCCA 111
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGATACTACGTCGTTTCATCTGCTACAACGCTTCTTCAACTGTTTCATCTATAGCTCCG 60
Query 112 TCACCGAAGAAGAAGCCTCTCATCTTCTTAGGCTCTCCTCAGGTCTCCGTGAGTGTGCTT 171
|| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 61 TCTCCGAAGAAGAAGCCTCTCATCTTCTTAGGCTCTCCTCAGGTCTCCGTGACTGTGCTT 120
Query 172 GAAGCTCTTTTCAATGCATCTAATGCTCCAAACTCTTCCTTCGAGGTTGCAGGTATTGTT 231
||||||||||||||||||||| ||| |||||||||||||| ||||||||||| ||||||
Sbjct 121 GAAGCTCTTTTCAATGCATCTGCTGCACCAAACTCTTCCTTTGAGGTTGCAGGCATTGTT 180
Query 232 ACACAGCCTCCATCAAGGAGAGATAGGGGTAAAAAAGTGTTGCCTTCACCAGTAGCGCAA 291
|||||||||||||||||||||||| |||||| ||||||||||||||| || |||||||||
Sbjct 181 ACACAGCCTCCATCAAGGAGAGATCGGGGTAGAAAAGTGTTGCCTTCGCCTGTAGCGCAA 240
Query 292 TACGCTCTTGATAAAGGCTTACCTTCTGATCTCATTTTCTCCCCTGAGAAGGCAGGAGAT 351
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 241 TACGCTCTTGATAAAGGCTTACCTTCTGATCTCATTTTCTCCCCGGAGAAGGCAGGAGAT 300
Query 352 GAAGCATTTTTATCGGCTTTAAGAGAGTTGCAACCTGAGCTTTGTATTACAGCAGCTTAT 411
|||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 301 GAAGCATTCTTATCGGCTTTACGAGAGTTGCAACCTGAGCTTTGTATTACAGCAGCTTAT 360
Query 412 GGGAATATTTTGCCTACTAAGTTCCTTAAGATTCCGGTACATGGGACAGTGAACATACAC 471
|||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct 361 GGGAATATATTGCCTACTAAGTTCCTTAAAATTCCATTACATGGGACAGTGAACATACAC 420
Query 472 CCAAGTTTGCTGCCGCTGTACCGTGGTGCAGCTCCAGTTCAAAGAGCATTACAGGATGGT 531
||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 421 CCAAGTTTGTTGCCCCTGTACCGTGGTGCAGCTCCAGTTCAAAGAGCATTACAGGATGGT 480
Query 532 GTCCCGGAAACAGGAGTATCATTAGCATTTACTGTGCGTAAGTTAGATGCAGGGCCAGTG 591
|||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct 481 GTCCCGGAAACAGGAGTATCATTAGCATTTACCGTGCGAAAGTTAGATGCAGGGCCAGTG 540
Query 592 ATTGCCTCTAAGAGGTTCCAAGTGGATGATCTAATAAAGGCACCAGAACTACTCTCGTTC 651
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 541 ATTGCCTCTAAGAGGTTCCAAGTGGATGATCTAATAAAGGCACCAGAACTGCTCTCGTTC 600
Query 652 CTATTTTCTGAAGGTTCTAATCTTCTTATCCGTGAACTTCCCTCGATATTTGATGGGTCC 711
||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||
Sbjct 601 CTATTTTCTGAAGGTTCAAAGCTTCTTATCCGTGAACTTCCCTCAATATTTGATGGGTCT 660
Query 712 GCAAAATCAAAAGCAGCTCCCCAAGATGATTCTAAAGCTACCTTAGCTCCAAAGATAGCT 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 GCAAAATCAAAAGCAGCTCCCCAAGATGATTCTAAAGCTACCTTAGCTCCAAAGATAGCT 720
Query 772 CCAGATGAGGCTTGGCTCTCTTTTGACCAGGAAGCTTTTGTTCTACATAACAAGGTTCGT 831
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 721 CCAGATGAGGCTTGGCTCTCTTTTGACGAGGAAGCTTTTGTTCTACATAACAAGGTTCGT 780
Query 832 GCATTTGCAGGATGGCCGGGAACACGAGCAAAAGTTGTAGTCCTTGATGAGAAAAGCGGT 891
|||||||||||||||||||||||| |||| |||||||||||||| ||||| |||||||||
Sbjct 781 GCATTTGCAGGATGGCCGGGAACAAGAGCTAAAGTTGTAGTCCTCGATGATAAAAGCGGT 840
Query 892 CAGCAAAATGTGCTAGAGCTTAAAATTATGTCCACTCGAGTATGCAAAGATCTGGAAATT 951
||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 841 CAGCAAAATGTACTAGAGCTTAAAATCATGTCCACTCGAGTATGCAAAGATCTGGAAATC 900
Query 952 CAGGATAGTGAACAAGATTATGTAACTTTCAAGAAAGGTTCACTAATATTTCCCTGCAGA 1011
|||||| ||| ||||||||||||||||||||||||||||||| | | |||||||| ||
Sbjct 901 CAGGATGGTGGACAAGATTATGTAACTTTCAAGAAAGGTTCATTGGTGTTTCCCTGTGGA 960
Query 1012 GGAGGTACAGCTTTAGAGGTACTGGAAGTCCAGCTTCCTGGTAAGAAAGCCATCAACGCA 1071
|||||||| |||||||||||||| |||||||||||||||||||| ||||| ||||||||
Sbjct 961 GGAGGTACTGCTTTAGAGGTACTAGAAGTCCAGCTTCCTGGTAAAAAAGCTATCAACGCG 1020
Query 1072 GCTGCTTTTTG 1082
|| || |||||
Sbjct 1021 GCCGCCTTTTG 1031
> Ahg908032 jgi|Araly1|908032|Al_scaffold_0002_1113
Length=510
Score = 575 bits (311), Expect = 3e-163
Identities = 408/452 (90%), Gaps = 18/452 (4%)
Strand=Plus/Plus
Query 304 AAAGGCTTACCTTCTGATCTCATTTTCTCCCCTGAGAAGGCAGGAGATGAAGCATTTTTA 363
||||| ||||||||| |||||| ||||| ||||||||||||||||||||||||||| |||
Sbjct 62 AAAGGTTTACCTTCTCATCTCAGTTTCT-CCCTGAGAAGGCAGGAGATGAAGCATTCTTA 120
Query 364 TCGGCTTTAAGAGAGTTGCAACCTGAGCTTTGTATTACAGCAGCTTATGGGAATATTTTG 423
|||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||
Sbjct 121 ACGGCTTTAAGAGAGTTGCAATCTGCGCTTTGTATTACAGCAGGTTATGGGAATATTTTG 180
Query 424 CCTACTAAGTTCCTTAAGATTCCG---GTA---CA-----T-GGGACAGTGAACATACAC 471
|||||||||||||||||||||||| || | | |||||||||||||| |||
Sbjct 181 CCTACTAAGTTCCTTAAGATTCCGCCATTATTTAATGGTTTAGGGACAGTGAACATGCAC 240
Query 472 CCAAGTTTGCTGCCGCTGTACCGTGGTGCAGCTCCAGTTCAAAGAGCATTACAGGATGGT 531
||||||||| |||| || ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 241 CCAAGTTTGTTGCCCCTTTACCGTGGTGCTGCTCCAGTTCAAAGAGCATTACAGGATGGT 300
Query 532 GTCCCGGAAACAGGAGTATCATTAGCATTTAC--T-GTGCGTAAGTTAGATGCAGGGCCA 588
||||| |||||||||||| ||||||||||||| | ||||||||||||||| ||||||||
Sbjct 301 GTCCCTGAAACAGGAGTAACATTAGCATTTACGGTGGTGCGTAAGTTAGATTCAGGGCCA 360
Query 589 GTGATTGCCTCTAAGAGGTTCCAAGTGGATGATCTAATAAAGGCACCAGAACTACTCTCG 648
|||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||
Sbjct 361 GTGATTGCCTCTAAGAGGTTTCAAGTGGATGATCTAATTAAGGCACCAGAACTGCTCTCG 420
Query 649 TTCCTATTTTCTGAAGGTTCTAATCTTCTTATCCGTGAACTTCCCTCGATATTTGATGGG 708
|||||| |||||| | ||||||| |||||||||||| ||||||||| |||||||||||||
Sbjct 421 TTCCTAGTTTCTGTA-GTTCTAAGCTTCTTATCCGT-AACTTCCCTTGATATTTGATGGG 478
Query 709 TCCGCAAAATCAAAAGCAGCTCCCCAAGATGA 740
||||||||||||||||||| ||||||||||||
Sbjct 479 TCCGCAAAATCAAAAGCAGTTCCCCAAGATGA 510
> Ahg908155 jgi|Araly1|908155|Al_scaffold_0002_1236
Length=615
Score = 507 bits (274), Expect = 1e-142
Identities = 360/401 (90%), Gaps = 8/401 (2%)
Strand=Plus/Plus
Query 723 AGCAGCTCCCCAAGATGATTCTAAAGCTACCTTAGCTCCAAAGATAGCTCCAGATGAGGC 782
||||| ||||||||||||| ||||||||||||||||||||||| | ||||||||||||||
Sbjct 219 AGCAGTTCCCCAAGATGATCCTAAAGCTACCTTAGCTCCAAAGTTGGCTCCAGATGAGGC 278
Query 783 TTGGCTCTCTTTTGACCAGGAAGCTTTTGTTCTACATAACAAGGTTCGTGCATTTGCAGG 842
||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct 279 TTGGCTCTCTTTTGACCAGGAAGCTTTTGTTCTGCATAACAAGGTTCGTGCATTCGCAGG 338
Query 843 ATGGCCGGGAACACGAGCAAAAGTTGTAGTCCTT-GATGAGAAAAGCGGTCAGCAAAATG 901
|||||| |||||| | || ||| |||||||| || ||||| |||||| ||||| |||| |
Sbjct 339 ATGGCCAGGAACATGCGCTAAATTTGTAGTC-TTCGATGACAAAAGCAGTCAGGAAAAGG 397
Query 902 TGCTAGAGCTTAAAATTATGTCCACTCGAGTATG-CAAAGATCTGGAAATTCAGG-ATAG 959
|||| ||||||||||| || ||||||||||||| ||| | | ||||||| | || || |
Sbjct 398 TGCTCGAGCTTAAAATCATCACCACTCGAGTATGTCAA-GCTTTGGAAAT-CTGGGATGG 455
Query 960 TGAACAAGATTATGTAACTTTCAAGAAAGGTTCACTAATATTTCCCTGCAGAGGAGGTAC 1019
||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||
Sbjct 456 TGAACAAGATTATGTAACTTTCAAGAAAGGTTCACTAATGTTTCCCTGCAAAGGAGATAC 515
Query 1020 AGCTTTAGAGGTACTGGAAGTCCAGC-TTCCTGGTAAGAAAGCCATCAACGCAGCTGCTT 1078
||||||||||||||| ||||||| || ||| |||||||||||| ||||| ||||| || |
Sbjct 516 AGCTTTAGAGGTACTAGAAGTCCGGCCTTC-TGGTAAGAAAGCGATCAAGGCAGCCGCAT 574
Query 1079 TTTGGAATGGCTTGAGAGGTCAAAAGCTGAAGAAGCTATGA 1119
||||||||||||||||||||||||||||| |||||||||||
Sbjct 575 TTTGGAATGGCTTGAGAGGTCAAAAGCTGCAGAAGCTATGA 615
Score = 296 bits (160), Expect = 3e-79
Identities = 192/207 (93%), Gaps = 3/207 (1%)
Strand=Plus/Plus
Query 457 ACAGTGAACATACACCCAAGTTTGCTGCCGCTGTACCGTGGTGCAGCTCCAGTTCAAAGA 516
||||||||||| |||||||||||| |||| || ||||||||||| |||||||||||||||
Sbjct 10 ACAGTGAACATGCACCCAAGTTTGTTGCCCCTTTACCGTGGTGCTGCTCCAGTTCAAAGA 69
Query 517 GCATTACAGGATGGTGTCCCGGAAACAGGAGTATCATTAGCATTTAC--T-GTGCGTAAG 573
|||||||||||||||||||| |||||||||||| ||||||||||||| | |||||||||
Sbjct 70 GCATTACAGGATGGTGTCCCTGAAACAGGAGTAACATTAGCATTTACGGTGGTGCGTAAG 129
Query 574 TTAGATGCAGGGCCAGTGATTGCCTCTAAGAGGTTCCAAGTGGATGATCTAATAAAGGCA 633
|||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct 130 TTAGATTCAGGGCCAGTGATTGCCTCTAAGAGGTTTCAAGTGGATGATCTAATTAAGGCA 189
Query 634 CCAGAACTACTCTCGTTCCTATTTTCT 660
|||||||| |||||||||||| |||||
Sbjct 190 CCAGAACTGCTCTCGTTCCTAGTTTCT 216
> Ahg925834 jgi|Araly1|925834|scaffold_201395.1
Length=328
Score = 353 bits (191), Expect = 2e-96
Identities = 224/240 (93%), Gaps = 2/240 (1%)
Strand=Plus/Plus
Query 217 GTTGCAGGTATTGTTACACA-GCCTCCATCAAGGAGAGATAGGGGTAAAAAAGTGTTGCC 275
||||||| ||||||||||| | |||||||||| |||||||| || |||||||| |||||
Sbjct 36 GTTGCAGCCATTGTTACACATG-CTCCATCAAGTAGAGATAGTGGAAAAAAAGTTTTGCC 94
Query 276 TTCACCAGTAGCGCAATACGCTCTTGATAAAGGCTTACCTTCTGATCTCATTTTCTCCCC 335
||| || ||||||||||| |||||||||||||||||||||||| ||||||||||||||||
Sbjct 95 TTCTCCCGTAGCGCAATATGCTCTTGATAAAGGCTTACCTTCTCATCTCATTTTCTCCCC 154
Query 336 TGAGAAGGCAGGAGATGAAGCATTTTTATCGGCTTTAAGAGAGTTGCAACCTGAGCTTTG 395
|||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||
Sbjct 155 TGAGAAGGCAGGAGATGAAGCATTCTTATCGGCTTTAAGAGAGTTGCAACCTGCGCTTTG 214
Query 396 TATTACAGCAGCTTATGGGAATATTTTGCCTACTAAGTTCCTTAAGATTCCGGTACATGG 455
||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 215 TATTACAGCAGGTTATGGGAATATTTTGCCTACTAAGTTCCTTAAGATTCTGGTACATGG 274
> Ahg475684 jgi|Araly1|475684|fgenesh2_kg.2__814__AT1G66510.2
Length=1483
Score = 143 bits (77), Expect = 4e-33
Identities = 96/105 (91%), Gaps = 2/105 (2%)
Strand=Plus/Minus
Query 1028 AGGTACTGGAAGTCCAG-CTTCCTGGTAAGAAAGCCATCAACGCAGCTGCTTTTTGGAAT 1086
||||||| ||||||| | ||| ||||||||||||| ||||| ||||| || |||||||||
Sbjct 1331 AGGTACTAGAAGTCCGGCCTT-CTGGTAAGAAAGCGATCAAGGCAGCCGCATTTTGGAAT 1273
Query 1087 GGCTTGAGAGGTCAAAAGCTGAAGAAGCTATGAAGACAAAGACTG 1131
|||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1272 GGCTTGAGAGGTCAAAAGCTGAAGAAGCTATGAAGACAGAGACTG 1228
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 49407300432
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5