BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G66730.1 Length=4724 Score E Sequences producing significant alignments: (Bits) Value Ahg338905 jgi|Araly1|338905|fgenesh1_pg.C_scaffold_2001004 3402 0.0 > Ahg338905 jgi|Araly1|338905|fgenesh1_pg.C_scaffold_2001004 Length=4242 Score = 3402 bits (1842), Expect = 0.0 Identities = 2377/2623 (91%), Gaps = 85/2623 (3%) Strand=Plus/Plus Query 311 ATGGCCTCTGATTCC-GCCGGAGCCACAATCTCCGGCAACTTCTCAAACT-CCGACAACT 368 |||||| | |||||| | ||||| ||||||||||||||||||| |||| | ||| ||| Sbjct 1 ATGGCCACCGATTCCAG-CGGAGTCACAATCTCCGGCAACTTCCCAAA-TGACGAGAACG 58 Query 369 CAGAAACCCTAAATCTCAACACTACGA-AACTCTACTCATCAGCAATTTCCTCTATCTCT 427 ||||||||||||| ||| ||||||| | ||||||||||||||||||| ||||| ||||| Sbjct 59 CAGAAACCCTAAACCTCGACACTAC-AGAACTCTACTCATCAGCAATATCCTCCGTCTCT 117 Query 428 CCACAA-TTCCCCTCACCGAAACCAAC-ATCTTCATGTCCTTCAATCCCT-AATTCAAAA 484 |||||| |||||| ||||||||||| | || |||| || |||||||||| || |||||| Sbjct 118 CCACAATTTCCCC-CACCGAAACCACCGTTC-TCATCTCTTTCAATCCCTCAA-TCAAAA 174 Query 485 CGAATCCCTAATACTAACTTCATCGTCGATCTCTTCCGCCTCCCACACCAATCAT---CC 541 ||||||||||| ||||||||||||||||||||||||||| ||||||| || || | || Sbjct 175 CGAATCCCTAAGACTAACTTCATCGTCGATCTCTTCCGCTTCCCACAACATTCCTCCACC 234 Query 542 TCCGTCGCTTTCTTCCTCTCACATTTCCACTCCGATCACTACTCCGGTCTCTCCTCTTCC 601 ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| | Sbjct 235 TCCGTCGCTTTCTTCCTCTCACATTTCCATTCCGATCACTATTCCGGTCTCTCCTCTACT 294 Query 602 TGGTCCAAAGGAATAATCTACTGCTCACACAAAACCGCTCGTCTCGTTGCAGAAATCCTT 661 ||||| |||||||| |||| ||||||||||||||||||||||||||| | |||||||||| Sbjct 295 TGGTCTAAAGGAATTATCTTCTGCTCACACAAAACCGCTCGTCTCGTCGAAGAAATCCTT 354 Query 662 CAAGTTCCTTCACAATTCGTTTTCGCTTTACCTATGAACCAAATGGTTAAGATCGATGGC 721 |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| Sbjct 355 CAAGTTCCTTCACAATTCGTCTTCGCTTTACCTATGAACCAAATGGTTATGATCGATGGC 414 Query 722 TCTGAAGTTGTGTTGATTGAAGCTAATCATTGTCCAGGAGCGGTACAGTTTTTGTTTAAA 781 ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct 415 TCTGAAGTTGTGTTGATTGAAGCAAATCACTGTCCAGGAGCGGTACAGTTTTTGTTTAAA 474 Query 782 GTCAAATTAGAGAGCAG-TGGATTTGAAAAGTATGTTCATACTGGAGATTTTAGATTCTG 840 ||||||||||||| | | ||||||||| | ||||||||||||||||||||| |||||||| Sbjct 475 GTCAAATTAGAGAAC-GATGGATTTGAGAGGTATGTTCATACTGGAGATTTCAGATTCTG 533 Query 841 TGATGAGATGAGATTTGATCCGTTTCTTAATGGTTTTGTTGGTTGTGATGGTGTTTTTCT 900 ||||||||||||||||||| ||||||||| ||||||| |||| ||||||||||||||||| Sbjct 534 TGATGAGATGAGATTTGATTCGTTTCTTAGTGGTTTTATTGGATGTGATGGTGTTTTTCT 593 Query 901 CGATACTACTTATTGTAATCCTAAGTTTGTTTTTCCGA-GTCAAGAAGAGTCTGTTGGTT 959 ||||||||||||||||||||||||||||||||||||| | ||||| || |||||||||| Sbjct 594 GGATACTACTTATTGTAATCCTAAGTTTGTTTTTCCGACG-CAAGAGGAATCTGTTGGTT 652 Query 960 ATGTTGTTAGTGTGATAGAT-A-A--GAT--T-A----GT---GA-G--G-AGAAGGTTT 1001 |||||||||||||||||||| | | ||| | | || || | | ||||||||| Sbjct 653 ATGTTGTTAGTGTGATAGATAAGATTGATGGTGAGTGTGTGGAGACGAAGAAGAAGGTTT 712 Query 1002 TGTTTCTTGTAGCTACTTATGTTGTTGGTAAAGAGAAGATTTTGGTTGAGATTGCTAGGA 1061 |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 713 TGTTTCTTGTTGCTACTTATGTTATTGGTAAAGAGAAGATTTTGGTTGAGATTGCTAGGA 772 Query 1062 GATGTAAGAGGAAAATCGTTGTCGATGC-GAGAAAGATGTCGATGTTGTCGG-TTTTGGG 1119 |||||||||||||||| ||||| ||| | || ||||||||||| ||| || ||||||| Sbjct 773 GATGTAAGAGGAAAATTGTTGTGGAT-CTCAGGAAGATGTCGATTTTG-GGGATTTTGGG 830 Query 1120 GTGTGGTGAGGAG-GGAATGTTTACTGAAGATGAGAATGAGAGTGATGTTCATGTTGTGG 1178 |||||| || ||| ||||||||||| || |||| ||||| |||||||||||||||||||| Sbjct 831 GTGTGGGGA-GAGTGGAATGTTTACGGAGGATGTGAATGTGAGTGATGTTCATGTTGTGG 889 Query 1179 GGTGGAATGTGTTGGGTGAGACTTGGCCGTATTTTAGGCCGAATTTTGTGAAGATGAATG 1238 |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| Sbjct 890 GGTGGAATGTGTTGGGAGAGACTTGGCCGTATTTTCGGCCGAATTTTGTGAAGATGAATG 949 Query 1239 AGATTATGGTTGAGAAAGGGTATGATAAGGTTGTAGGTTTTGTGCCTACAGGGTGGACTT 1298 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 950 AGATTATGGTCGAGAAAGGGTATGATAAGGTTGTAGGTTTTGTGCCTACAGGGTGGACTT 1009 Query 1299 ATGAAGTGAAGCGGAATAAGTTTGCGGTTAGGTTTAAAGATTCGATGGAGATTCATCTTG 1358 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1010 ATGAAGTGAAGCGGAATAAGTTTGCCGTTAGGTTTAAAGATTCGATGGAGATTCATCTTG 1069 Query 1359 TACCGTATAGTGAGCATTCGAATTATGATGAACTTAGAGAGTTTATAAAGTTCCTGAAAC 1418 |||||||||||||||||||||| |||||||| |||||||||| ||||||||| |||||| Sbjct 1070 TACCGTATAGTGAGCATTCGAACTATGATGAGCTTAGAGAGTACATAAAGTTCTTGAAAC 1129 Query 1419 CTAAAAGAGTTATTCCTACTGTTGGAGTTGATATTGAGAAGTTTGATTGCAAGGAGGTTA 1478 ||||||||||||||||||| |||||||||||||| |||||| ||||| |||||||||||| Sbjct 1130 CTAAAAGAGTTATTCCTACAGTTGGAGTTGATATCGAGAAGCTTGATAGCAAGGAGGTTA 1189 Query 1479 ATAAGATGCAGAAGCATTTCTCTGGATTGGTTGATGAGATGGCAAACAAGAAAGATTTTT 1538 ||||||||||||| ||||| ||||||||||| ||||| |||||||||||||||||||||| Sbjct 1190 ATAAGATGCAGAAACATTTTTCTGGATTGGTAGATGAAATGGCAAACAAGAAAGATTTTT 1249 Query 1539 TATTGGGTTTCTATCGTCAGTCTTACCAGAAGAATGAGAAAAGTGATGTAGATGTTGTGT 1598 |||||||||||||| | ||||||||||||||||||||||||| ||| ||||||||||||| Sbjct 1250 TATTGGGTTTCTATTGCCAGTCTTACCAGAAGAATGAGAAAAATGACGTAGATGTTGTGT 1309 Query 1599 CACACAGTG-CTGAGGTTTACGAAGAGGAAGAGAAAAATGCATGTGAAGACGGTGGAGAG 1657 || | || ||||||| |||| || |||||| |||||||||||||||||||||||||| Sbjct 1310 CAGGCT-TGGCTGAGGTCTACGCAGGGGAAGATAAAAATGCATGTGAAGACGGTGGAGAT 1368 Query 1658 AATGTTCCATCATCTAGAGGACCCATATTGCATGATACAACTCCAAGTAGTGATTC---- 1713 |||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct 1369 AATGTTCCATCATCTAGAGGACCCTTATTGCATGATACAGCTCCAAGTAGTGATTCTTCG 1428 Query 1714 ---A---A--GATTGCT-GATAAAACTACGTGATTCTTTGCCTGCTTGGGTCACTGAAGA 1764 | | ||||||| | || ||||||||||||||||||||||||||||||||||||| Sbjct 1429 GTGACCGAAAGATTGCTTG-TAGAACTACGTGATTCTTTGCCTGCTTGGGTCACTGAAGA 1487 Query 1765 GCAGATGTTAGAT-CTGATTAAGAAGCATGCTGGTAATCCCGTGGATATAGTAAGTAACT 1823 |||||||||| || |||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct 1488 GCAGATGTTA-ATTCTGATTAAGAAGCATGCTGGTAATCCCGTGGAAATAGTTAGTAACT 1546 Query 1824 TTTATGAATATGAAGCAGAGCTTTACAAGCAAGCCTCTCTTCCCACGCCTTCCTTG-AAT 1882 ||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||| || Sbjct 1547 TTTATGAATGTGAAGCAGAGCTTTACAAGCAATCCTCTCTTCCCACGCTTTCCTTGGAA- 1605 Query 1883 AATCAGGCTGTTTTGTTTGATGACGATGTAACCGACCTCCAACCTAATCCTGTGAA-AGG 1941 |||||| ||||||||||||||||||||||||| ||| | ||||| ||||||||||| || Sbjct 1606 AATCAGCCTGTTTTGTTTGATGACGATGTAACAGACTTGCAACCAAATCCTGTGAAGAG- 1664 Query 1942 CATTTGTCCAGATGTTCAAGCAATTCAAAAAGGTTTTGACTTACCAAGAAAAATGAATTT 2001 || ||||||||||||||||||| ||||| |||||||||||||||||| |||||||||||| Sbjct 1665 CACTTGTCCAGATGTTCAAGCAGTTCAAGAAGGTTTTGACTTACCAAAAAAAATGAATTT 1724 Query 2002 AACAAAGGGTACTATTTCTCCTGGGAAGAGAGGCAAAAGCTCGGGCAGTAAGTCAAACAA 2061 ||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| Sbjct 1725 AACAAAGGGTACTATTTCTCCTGGGAAAAGAGGCAAAAGCTCGGGCAGTAAATCGAACAA 1784 Query 2062 GAAGGCCAAGAAAGATCCAAAATCAAAACCAGTTGGTCCAGGGCAGCCAAC-ACTTTTTA 2120 |||||||||||||||||||||||||| ||||||| ||||| |||||||||| | |||||| Sbjct 1785 GAAGGCCAAGAAAGATCCAAAATCAAGACCAGTTAGTCCAAGGCAGCCAACCA-TTTTTA 1843 Query 2121 AGTTTTTCAATAAGGTCTTAGATGGTGGATCTAATTCTGTTAGTGTTGGTTCAGAGACTG 2180 |||| |||||||||||||| ||| ||||||||||||||||| ||||||| |||||||||| Sbjct 1844 AGTTCTTCAATAAGGTCTTGGATAGTGGATCTAATTCTGTTGGTGTTGGATCAGAGACTG 1903 Query 2181 AAGAATGCAATACAGATAAAAAGATGGTCCACATTGATGCTTCAGAAGCATACAAAGAAG 2240 |||| || ||||||||||||||||||| ||||| ||||||| |||||||||||||||||| Sbjct 1904 AAGAGTGTAATACAGATAAAAAGATGGGCCACAATGATGCTACAGAAGCATACAAAGAAG 1963 Query 2241 TGACAGATCAATTTATTGATATTGTTAACGGTTCTGAATCTTTAAGAGATTATGCTGCTT 2300 |||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||| Sbjct 1964 TGACAGATCAATTTATTGATATTGTTAATGGCTCTGAATCTCTAAGAGATTATGCTGCTT 2023 Query 2301 CCATCATTGATGAGGCTAAAGGAGATATAAGTAGGGCACTGAACATCTATTATAGCAAAC 2360 |||||||||||||||||||||||||||||| ||||||||||||||||||||| || || | Sbjct 2024 CCATCATTGATGAGGCTAAAGGAGATATAAATAGGGCACTGAACATCTATTACAGTAA-C 2082 Query 2361 CCCGTGAAATACCTGGTGACCATGCAGGTGAGAGAGGACTCTCTAGCAAAACAATTCAGT 2420 ||| | |||||||||| | || || || ||||| |||||| ||||||||| Sbjct 2083 CCC---A--TACCTGGTGA----G--GG--AG-GA---CTCTCCAGCAAATCAATTCAGT 2125 Query 2421 ATCCGAAATGTTCAGAAGCATGCTCCTCTCAGGAGGACAAAAAGGCTTCAGAAAATTCAG 2480 | || | ||| ||||||| || ||||||||||||| ||| |||| |||||||| |||| Sbjct 2126 TTTCGCATTGTCCAGAAGCGTGTTCCTCTCAGGAGGGGAAACAGGCGTCAGAAAAGTCAG 2185 Query 2481 GACATGCAGTCAACATATGCGTGCAGACATCAGCAGAGGAAAGTGTAGACAAGAATTATG 2540 ||||||||||||||||||| |||||| ||||||||||||||| ||| ||||| ||||||| Sbjct 2186 GACATGCAGTCAACATATGTGTGCAGTCATCAGCAGAGGAAATTGTGGACAAAAATTATG 2245 Query 2541 TATCTCTACCTCCTGAAAAATATCAACCTAAAGAGCACGCTTGTTGGAGGGAGGGACAGC 2600 ||||||||||||||||| ||||| |||||||||| ||||| ||||||||||| ||||||| Sbjct 2246 TATCTCTACCTCCTGAACAATATAAACCTAAAGAACACGCCTGTTGGAGGGATGGACAGC 2305 Query 2601 CTGCTCCATATATCCACCTTGTCCGAACATTTGCTTCTGTTGAAAGTGAAAAGGGAAAGA 2660 ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct 2306 CTGCTCCATATATCCACCTAGTCCGAACATTTGCTTCCGTTGAAAGTGAAAAGGGAAAGA 2365 Query 2661 TCAAAGCTATGTCTATGCTTTGCAACATGTTTAGAAGCTTGTTTGCTCTCTCTCCAGAAG 2720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2366 TCAAAGCTATGTCTATGCTTTGCAACATGTTTAGAAGCTTGTTTGCTCTCTCTCCAGAAG 2425 Query 2721 ATGTTCTGCCCGCTGTTTATCTTTGCACAAATAAGATTGCCGCTGACCATGAGAATATTG 2780 |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct 2426 ATGTTCTGCCCGCTGTTTATCTTTGCACAAATAAGATTTCGGCTGACCATGAGAATATTG 2485 Query 2781 AGCTTAACATTGGTGGAAGTCTAATCTCTTCTGCATTGGAAGAAGCATGTGGAATAAGTC 2840 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2486 ATCTTAACATTGGTGGAAGTCTAATCTCTTCTGCATTGGAAGAAGCATGTGGAATAAGTC 2545 Query 2841 GGTCTACTGTGAGAGATATGTATAATAGCTTGGGGGATCTTGG 2883 || |||||||||| ||||||||||||||| || |||||||| Sbjct 2546 GGCCTACTGTGAGGGATATGTATAATAGCACCGGAGATCTTGG 2588 Score = 2407 bits (1303), Expect = 0.0 Identities = 1521/1627 (93%), Gaps = 12/1627 (1%) Strand=Plus/Plus Query 2881 TGGGGATGTTGCTCAGCTATGTCGACAAACGCAAAAGCTACTGGTTCCTCCACCTCCACT 2940 ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2622 TGGAGATGTTGCGCAGCTATGTCGACAAACGCAAAAGCTACTGGTTCCTCCACCTCCACT 2681 Query 2941 TCTAGTTAGAGATGTGTTTTCAACTCTACGAAAGATAAGTGTGCAGACAGGTACTGGAAG 3000 |||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 2682 TCTAATCAGAGATGTGTTTTCAACTCTACGAAAGATAAGTGTGCAGTCAGGTACTGGAAG 2741 Query 3001 TACTAGGCTAAAGAAAAATCTCATCGTGAAGCTAATGCGCTCTTGTAGAGAGAAAGAGAT 3060 |||||||| ||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct 2742 TACTAGGCAAAAGAAAAACCTTATCGTGAAGCTAATGCGCTCTTGTAGAGAGAAAGAGAT 2801 Query 3061 CAAATTTCTTGTTAGAACATTGGCCCGTAATTTAAGGATTGGCGCTATGTTGAGAACTGT 3120 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2802 CAAATTTCTTGTAAGAACATTGGCCCGTAATTTAAGGATTGGCGCTATGTTGAGAACTGT 2861 Query 3121 TCTACCTGCACTTGGGCGAGCAATCGTTATGAATTCTTTCTGGA-ATGACCATAATAAAG 3179 ||| ||||||||||||||||||||||||||||||||||| |||| || |||||| |||| Sbjct 2862 TCTTCCTGCACTTGGGCGAGCAATCGTTATGAATTCTTTTTGGAGTTG-CCATAACAAAG 2920 Query 3180 AACTATCAGAAAGCTGTTTCAGGGAGAAACTTGAGGGTGTTTCTGCTGCAGTAGTTGAGG 3239 |||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 2921 AACTGTCAGAAAACTGTTTCAGGGAGAAACTTGAGGGAGTTTCTGCTGCAGTAGTTGAGG 2980 Query 3240 CTTACAACATTCTTCCATCTCTGGACGTGGTTGTTCCTTCTCTCATGGACAAAGACATTG 3299 ||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 2981 CTTACAATATACTTCCTTCTCTGGACGTGGTTGTTCCTTCTCTCATGGACAAAGACATTG 3040 Query 3300 AGTTTTCAACGTCAACTCTGTCAATGGTCCCAGGGATACCTATAAAACCCATGCTTGCAA 3359 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| | Sbjct 3041 AGTTTTCAACGTCAACTCTATCAATGGTTCCAGGGATACCTATAAAACCCATGCTTGCTA 3100 Query 3360 AAATTGCTAAGGGGGTTCAAGAATTTTTTAACCTCTCCCAAGAAAAGGCCTTTACTTGTG 3419 ||||||||||||| || ||||||||| || | |||| |||||| ||||| |||||||||| Sbjct 3101 AAATTGCTAAGGGCGTCCAAGAATTTGTTGAGCTCTTCCAAGACAAGGCGTTTACTTGTG 3160 Query 3420 AATACAAATATGATGGCCAGCGCGCCCAGATCCATAAGTTACTTGATGGTACTGTGTGTA 3479 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| Sbjct 3161 AATACAAATATGATGGTCAGCGCGCCCAGATCCATAAGTTACTTGATGGTACTGTGCGTA 3220 Query 3480 TCTTTTCTCGGAATGGGGACGAAACAAC-GTCCAGATTTCCGGATCTGGTTGATGTCATA 3538 |||| ||||||||||||||||||||||| | | |||||||||||||| |||||||||||| Sbjct 3221 TCTTCTCTCGGAATGGGGACGAAACAACAG-CGAGATTTCCGGATCTTGTTGATGTCATA 3279 Query 3539 AAACAGTTTTCTTGCCCTGCCGCTGAGACATTCATGTTGGACGCAGAGGTGGTTGCCACT 3598 |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct 3280 AAACAGTTTTCTTGCCCTATAGCTGAGACATTCATGTTGGACGCAGAGGTGGTTGCAACT 3339 Query 3599 GATAGAATAAATGGAAACAAACTCATGTCATTCCAAGAGTTATCAACAAGAGAGAGAGGG 3658 ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 3340 GATAGAAAAAATGGAAGCAAACTCATGTCATTCCAAGAGTTATCAACAAGAGAGAGAGGA 3399 Query 3659 AGCAAAGATGCTTTGATAACTACAGAAAGTATTAAGGTTGAAGTCTGCGTCTTCGTGTTT 3718 ||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 3400 AGCAAAGATGCTTTGGTAACTACCGAAAGTATTAAGGTTGAAGTCTGCGTCTTTGTGTTT 3459 Query 3719 GATATTATGTTTGTCAATGGAGAACAGCTGTTGGCTCTTCCCCTCCGTGAGAGACGAAGA 3778 ||||||||||| | ||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct 3460 GATATTATGTTCGGCAATGGAGAACAGCTGTTGGCTCTTCCTCTCCGTGAGAGAAGAAGA 3519 Query 3779 CGTCTAAAGGAGGTCTTCCCTGAGACTAGGCCAGGTTATCTTGAGTATGCTAAGGAAATA 3838 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 3520 CGTCTAAAGGAGGTCTTCCCTGAGACTAGGCCAGGTTATCTTGAATATGCTAAGGAAATT 3579 Query 3839 ACTGTGGGAGCAGAAGAAGCGTCTCTGAATAATCATGACACATTGAGTAGGATAAATGCT 3898 || |||| |||||||||||| ||| |||||||||| ||||| |||||||| ||||||||| Sbjct 3580 ACAGTGGAAGCAGAAGAAGCTTCTTTGAATAATCAGGACACTTTGAGTAGAATAAATGCT 3639 Query 3899 TTTCTTGA-AGAAGCATTTCAGTCATCTTGTGAAGGAATCATGGTCAAGTCTTTAGATGT 3957 ||| ||| ||||||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct 3640 TTT-TTGGGAGAAGCATTTCAGTCATCTTGCGAAGGAATCATGGTTAAGTCTTTAGATGT 3698 Query 3958 AAATGCTGGATACTGCCCCACAAAGCGCTCTGATTCATGGCTCAAGGTTAAGCGAGATTA 4017 |||| ||||||| |||||||||||| | |||||||||||||||||||||||||||||| Sbjct 3699 TGATGCAGGATACTTCCCCACAAAGCGTTATGATTCATGGCTCAAGGTTAAGCGAGATTA 3758 Query 4018 TGTAGATGGATTGGGCGATACATTGGATTTAGTTCCTATTGGTGCTTGGTATGGCAATGG 4077 |||||||||||||||||| ||||| |||||||||||||| ||||||||| ||||||| || Sbjct 3759 TGTAGATGGATTGGGCGACACATTAGATTTAGTTCCTATAGGTGCTTGGCATGGCAACGG 3818 Query 4078 GAGAAAAGCAGGATGGTATAGTCCATTCCTTATGGCCTGCTTCAACCCTGAGACTGAAGA 4137 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 3819 GAGAAAAGCGGGATGGTATAGTCCATTCCTTATGGCCTGCTTCAACCCTGAGACTGAGGA 3878 Query 4138 ATTCCAGAGTGTCTGCCGTGTCATGTCTGGTTTTTCTGATGCCTTTTACATCGAGATGAA 4197 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 3879 ATTCCAGAGTGTCTGCCGTGTCATGTCTGGGTTTTCTGATGCCTTTTACATCGAGATGAA 3938 Query 4198 AGAATTCTACTC-GGAGGATAAGATCCTTGCGAAAAAGCCGCCTTACTACAGAACAGGGG 4256 |||| ||||||| || ||||||||||||| |||||||||||||||||||||||||||||| Sbjct 3939 AGAACTCTACTCAGG-GGATAAGATCCTTACGAAAAAGCCGCCTTACTACAGAACAGGGG 3997 Query 4257 AGACACCTGACATGTGGTTTTCCGCAGAGGTAGTTTGGGAAATCAGAGGTGCTGATTTCA 4316 | ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct 3998 AAACACCTGACATGTGGTTTTCCGCAGAGGTTGTTTGGGAAATCAGAGGTGCAGATTTCA 4057 Query 4317 CAGTCTCGCCTGTTCACAGTGCCAG-TTTAGGTCTCGTCCATCCATCGCGAGGCATCTCT 4375 | ||||||||||||||||||||| | ||||||||||||||||||||| ||||| ||||| Sbjct 4058 CGGTCTCGCCTGTTCACAGTGCC-GCTTTAGGTCTCGTCCATCCATCCCGAGGTATCTCC 4116 Query 4376 GTTAGGTTTCCGAGATTTAT-CAGTAAAGTGACAGATAGAAATCCTGAAGAATGTAGTAC 4434 |||||||||||||||||||| | ||||||| ||||| |||||||| || ||||| || || Sbjct 4117 GTTAGGTTTCCGAGATTTATTC-GTAAAGTAACAGACAGAAATCCGGAGGAATGCAGCAC 4175 Query 4435 GGCTACAGATATCGCAGAGATGTTTCATGCTCAAACCAGAAAAATGAACATCACTTCTCA 4494 ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 4176 AGCTGCAGATATCGCAGAGATGTTTCATGCTCAAACCAGAAAAATGAACATCACCTCTCA 4235 Query 4495 ACATTAA 4501 ||| ||| Sbjct 4236 ACAATAA 4242 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 178756420381 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5