BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G66780.1 Length=1458 Score E Sequences producing significant alignments: (Bits) Value Ahg951906 jgi|Araly1|951906|scaffold_24700001.1 2100 0.0 Ahg925891 jgi|Araly1|925891|scaffold_201452.1 1953 0.0 Ahg907722 jgi|Araly1|907722|Al_scaffold_0002_803 1234 0.0 Ahg925784 jgi|Araly1|925784|scaffold_201345.1 671 0.0 > Ahg951906 jgi|Araly1|951906|scaffold_24700001.1 Length=1497 Score = 2100 bits (1137), Expect = 0.0 Identities = 1320/1409 (94%), Gaps = 9/1409 (1%) Strand=Plus/Plus Query 1 ATGGAAAATGGTTTCTCGTTGGTGCCCAaagaagaggaagaag-a--agaagaTTATAGT 57 |||||||| || |||||||||||||| |||||||||||||||| | |||||||| ||| Sbjct 23 ATGGAAAAGGGCTTCTCGTTGGTGCCTAAAGAAGAGGAAGAAGAAGGAGAAGATTGTAG- 81 Query 58 A-ATGAGAAATCTGAAGATCAGACGAGTTATTATTTGTCAACAGAGATGATGAAGAAGGT 116 | |||||||||||||||| ||| |||||||||| ||||||| |||||||||||||||||| Sbjct 82 AGATGAGAAATCTGAAGACCAGTCGAGTTATTACTTGTCAATAGAGATGATGAAGAAGGT 141 Query 117 AAGCTTCATGGCTGCACCAATGGTGGCTGTGGCTGCTTCTCAATACCTCCTTCAAGTTAT 176 ||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct 142 AAGCTCCATGGCTGCTCCAATGGTGGCTGTGGCTGCTTCTCAGTACCTCCTTCAAGTTAT 201 Query 177 CTCCATTGTTATGGCTGGTCACTTGGACGAGCTTTCTCTCTCAGCCGTTGCTATTGCCAC 236 ||||||||||||||| ||||||||||||||||| |||||||| ||||||||||| || || Sbjct 202 CTCCATTGTTATGGCCGGTCACTTGGACGAGCTCTCTCTCTCCGCCGTTGCTATCGCTAC 261 Query 237 TTCTCTTACCAATGTCACCGGCTTCAGCCTCATCTTTGGATTGGCAGGTGCGTTAGAGAC 296 |||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct 262 TTCTCTTACCAACGTCACCGGCTTCAGCCTCCTCTTTGGATTGGCAGGTGCATTAGAGAC 321 Query 297 ACTGTGTGGTCAAGCTTTTGGAGCTGGGCAATTTAGGAATA-TCAGTGCATACACTTACG 355 |||||||||||||||||||||||||| |||||||||||| | |||||||||| ||||||| Sbjct 322 ACTGTGTGGTCAAGCTTTTGGAGCTGAGCAATTTAGGAA-AGTCAGTGCATATACTTACG 380 Query 356 GCTCAATGCTATGTCTTCTCTTGGTCTGTTTCCCAATCTCACTTTTGTGGGTTTTTATGG 415 ||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||| Sbjct 381 GCTCAATGCTATGTCTTCTCTTGTTCTGTTTTCCAATCTCACTTTTGTGGGTGTTTATGG 440 Query 416 ACAAACTCTTGGAGCTTTTCCATCAAGATCCTCTTATCTCTCAATTAGCTTGTAGATACT 475 |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| | Sbjct 441 ACAAACTCTTGGAGCTTTTCCATCAAGATCCTCTCATCTCTCAACTAGCTTGTAGATATT 500 Query 476 CAATCTGGCTCATACCGGCTTTATTCGGATACTCTGTTCTTCAATCTATGACTCGATTTT 535 | |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 501 CGATCTGGCTTATACCGGCTTTATTCGGATACTCTGTTCTTCAATCTATGACTCGGTTTT 560 Query 536 TCCAGTCACAAGGATTGGTTCTACCTCTCTTCTTGAGCTCTCTTGGAGCTCTCTTTTTTC 595 |||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||| Sbjct 561 TCCAGTCACAAGGATTGGTTCTTCCTCTCTTCTTGAGCTCTCTCGGAGCTCTCTGTTTTC 620 Query 596 ACGTTCCCTTTTCG-TGGCTTCTTGTCTATAAACTGAGATTCGGAATCGTCGGCGCCGCT 654 || ||||||||| | |||||||| ||||||||||||||||| |||||||||||||| ||| Sbjct 621 ACATTCCCTTTT-GTTGGCTTCTAGTCTATAAACTGAGATTTGGAATCGTCGGCGCTGCT 679 Query 655 TTGTCCATAGGTTTTTCGTATTGGCTCAACGTAGGTTTGCTTTGGGCTTTCATGAGAGAC 714 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 680 TTGTCCATAGGTTTTTCGTATTGGCTCAACGTAGGTTTGCTTTGGGTTTTCATGAGAAAA 739 Query 715 TCTGCTCTCTATCGAAAAAACTGGAATCTTCGGGCACAAGAAATCTTTTTGAGCATGAAG 774 |||||||| ||||| ||||||||||||||||||| |||||||| ||||||||||||||| Sbjct 740 TCTGCTCTATATCGCGAAAACTGGAATCTTCGGGCGCAAGAAATTTTTTTGAGCATGAAG 799 Query 775 CAGTTCATTACCCTAGCAATTCCCACTGCAATGATGACTTGCCTGGAATGGTGGTCGTTT 834 |||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||| Sbjct 800 CAGTTCATTACCCTCGCAATTCCCTCTGCAATGATGACTTGCCTAGAATGGTGGTCGTTT 859 Query 835 GAGCTTCTTATACTAATGTCAGGACTCTTACCAAACTCAAAGCTCGAAACATCGGTCCTA 894 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 860 GAGCTTCTTATACTAATGTCAGGACTCTTACCAAACTCAAAGCTCGAAACATCAGTCCTA 919 Query 895 TCCATTTGCCTAACAATGTCGTCTCTGCATTACGTTATCGTGAATGCCATAGGAGCAGCA 954 |||||||||||||||||||||||||| ||||||||| | |||||||| ||||||||||| Sbjct 920 TCCATTTGCCTAACAATGTCGTCTCTCCATTACGTTCTGGTGAATGCAATAGGAGCAGCC 979 Query 955 GCGAGCACACATGTCTCAAACAAGCTAGGAGCTGGAAATCCAAAGGCAGCTCGATCTGCG 1014 ||||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||| Sbjct 980 GCGAGCACACACGTCTCAAACAAGCTAGGAGCTGGAAATCCAAAGGCAGCTCGAGCCGCG 1039 Query 1015 GCTAATTCTGCGATTTTTCTTGGCATGATTGATGCAGCCATAGTAAGCATCAGTCTCTAC 1074 |||||||||||||||||||| ||| ||||||||||||| ||||||||||||| |||||| Sbjct 1040 GCTAATTCTGCGATTTTTCTAGGCGTGATTGATGCAGCAATAGTAAGCATCACTCTCTAT 1099 Query 1075 AGCTACAGAAGAAATTGGGCTTATATATTCAGTAATGAGAGTGAAGTCGCTGACTATGTC 1134 ||| ||| ||| |||||||||||||||||||| || ||||||||||||||||||||||| Sbjct 1100 AGCAACAAAAGTAATTGGGCTTATATATTCAGCAACGAGAGTGAAGTCGCTGACTATGTA 1159 Query 1135 ACTCAAATCACACCCTTTCTCTGTCTATCAATTGGTGTTGACAGCTTTCTCGCCGTACTC 1194 |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct 1160 ACTCAAATCACACCCTTTCTATGCCTATCAATTGGTGTTGACAGCTTTCTCGCCGTACTC 1219 Query 1195 TCAGGAGTTGCTAGAGGAACAGGGTGGCAACATATAGGAGCTTATGCAAACATAGGATCG 1254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1220 TCAGGAGTTGCTAGAGGAACAGGGTGGCAACATATAGGAGCTTATGCAAACATAGGATCA 1279 Query 1255 TATTATCTAGTCGGGATCCCGGTAGGTTCAATCTTGTGTTTTGTAGTGAAATTGAGAGGG 1314 |||||||| |||||||||||||||||||| ||||||||||| || ||||||||||||||| Sbjct 1280 TATTATCTGGTCGGGATCCCGGTAGGTTCGATCTTGTGTTTCGTTGTGAAATTGAGAGGG 1339 Query 1315 AAAGGACTTTGGATCGGTATATTGGTAGGTTCCACTCTACAAACGATTGTTCTTGCTCTT 1374 |||||||||||||||||||||||| | || || ||| ||||||||||||||||||||||| Sbjct 1340 AAAGGACTTTGGATCGGTATATTGATTGGCTCTACTTTACAAACGATTGTTCTTGCTCTT 1399 Query 1375 GTCACTTTCTTCACCAATTGGGAACAAGA 1403 ||||||||||||||||||||||||||||| Sbjct 1400 GTCACTTTCTTCACCAATTGGGAACAAGA 1428 > Ahg925891 jgi|Araly1|925891|scaffold_201452.1 Length=1524 Score = 1953 bits (1057), Expect = 0.0 Identities = 1262/1361 (93%), Gaps = 13/1361 (1%) Strand=Plus/Plus Query 97 ACAGAGATGATGAAGAAGGTAAGCTTCATGGCTGCACCAATGGTGGCTGTGGCTGCTTCT 156 |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 85 ACAGAGATGATGAAGAAGGTAAGCTTTATGGCTGCTCCAATGGTGGCTGTGGCTGCTTCT 144 Query 157 CAATACCTCCTTCAAGTTATCTCCATTGTTATGGCTGGTCACTTGGACGAGCT-T-TCTC 214 || |||||||||||||||||||||||||||||||| ||||||||||||||||| | |||| Sbjct 145 CAGTACCTCCTTCAAGTTATCTCCATTGTTATGGCCGGTCACTTGGACGAGCTCTCTCTC 204 Query 215 TCTCAGCCGTTGCTATTGCCACTTCTCTTACCAATGTCACCGGCTTCAGCCTCATCTTTG 274 |||| ||||||||||| || |||||||||||||| ||||||||| | ||| |||| Sbjct 205 TCTCCGCCGTTGCTATCGCTACTTCTCTTACCAACGTCACCGGC-T-----TCA--TTTG 256 Query 275 GATTGGCAGGTGCGTTAGAGACACTGTGTGGTCAAGCTTTTGGAGCTGGGCAATTTAGGA 334 |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct 257 GATTGGCAGGTGCGTTAGAGACACTGTGTGGTCAAGCTTTTGGAGCAGAGCAATTTAGGA 316 Query 335 ATATCAGTGCATACACTTACGGCTCAATGCTATGTCTTCTCTTGGTCTGTTTCCCAATCT 394 | ||| ||||||||||||| ||||||||||||||||||||||| | ||||||||||||| Sbjct 317 AAATCGGTGCATACACTTATAGCTCAATGCTATGTCTTCTCTTGTTTTGTTTCCCAATCT 376 Query 395 CACTTTTGTGGGTTTTTATGGACAAACTCTTGGAGCTTTTCCATCAAGATCCTCTTATCT 454 |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| Sbjct 377 CACTTTTGTGGGTTTTTATGGACAAACTATTGGAGCTTTTCCATCAAGATCCTCTCATCT 436 Query 455 CTCAATTAGCTTGTAGATACTCAATCTGGCTCATACCGGCTTTATTCGGATACTCTGTTC 514 |||| ||||| |||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct 437 CTCATTTAGCGTGTAGATATTCGATCTGGCTTATACCGGCTTTATTCGGATACTCTGTTC 496 Query 515 TTCAATCTATGACTCGATTTTTCCAGTCACAAGGATTGGTTCTACCTCTCTTCTTGAGCT 574 |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| Sbjct 497 TTCAATCTATGACTCGGTTTTCCCAGTCACAAGGATTGGTTCTACCTCTCTTCTTGAGCT 556 Query 575 CTCTTGGAGCTCTCTTTTTTCACGTTCCCTTTTCGTGGCTTCTTGTCTATAAACTGAGAT 634 |||| ||||||||| ||||||| |||||||||||||||||||||| ||||||||||||| Sbjct 557 CTCTCGGAGCTCTCAGTTTTCACATTCCCTTTTCGTGGCTTCTTGTTTATAAACTGAGAT 616 Query 635 TCGGAATCGTCGGCGCCGCTTTGTCCATAGGTTTTTCGTATTGGCTCAACGTAGGTTTGC 694 | |||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct 617 TTGGAATCTTCGGCTCTGCTTTGTCCATAGGTTTTTCGTATTGGCTCAACGTAGGTTTGC 676 Query 695 TTTGGGCTTTCATGAGAGACTCTGCTCTCTATCGAAAAAACTGGAATCTTCGGGCACAAG 754 |||||| |||||||||||| | || ||| ||||| ||||| ||||||||||||| |||| Sbjct 677 TTTGGGTTTTCATGAGAGATTTTGATCTGTATCGCGAAAACAGGAATCTTCGGGCGCAAG 736 Query 755 AAATCTTTTTGAGCATGAAGCAGTTCATTACCCTAGCAATTCCCACTGCAATGATGACTT 814 |||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||| Sbjct 737 AAATCTTTTTGAGCATGAAGCAGTTCATTACCCTCGCAATTCCCTCTGCGATGATGACTT 796 Query 815 GCCTGGAATGGTGGTCGTTTGAGCTTCTTATACTAATGTCAGGACTCTTACCAAACTCAA 874 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 797 GCCTGGAATGGTGGTCGTTTGAGCTTCTTATACTAATGTCCGGACTCTTACCAAACTCAA 856 Query 875 AGCTCGAAACATCGGTCCTATCCATTTGCCTAACAATGTCGTCTCTGCATTACGTTATCG 934 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct 857 AGCTCGAAACATCGGTATTATCCATTTGCCTAACAATGTCGTCTCTGCATTACGTTATTG 916 Query 935 TGAATGCCATAGGAGCAGCAGCGAGCACACATGTCTCAAACAAGCTAGGAGCTGGAAATC 994 ||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct 917 TGAATGCAATAGGAGCAGCCGCGAGCACACACGTCTCAAACAAGCTAGGAGCTGGAAATC 976 Query 995 CAAAGGCAGCTCGATCTGCGGCTAATTCTGCGATTTTTCTTGGCATGATTGATGCAGCCA 1054 | |||||||||||| | | ||| |||||||||||||||| || ||||||||||||||| Sbjct 977 CGAAGGCAGCTCGAGCCGTTGCTGATTCTGCGATTTTTCTCAGCGTGATTGATGCAGCCA 1036 Query 1055 TAGTAAGCATCAGTCTCTACAG-CTACAGAAGAAATTGGGCTTATATATTCAGTAATGAG 1113 |||||||||||| |||||| | |||| |||||||||||||||||||||||||||||||| Sbjct 1037 TAGTAAGCATCACTCTCTA-TGCCTACCGAAGAAATTGGGCTTATATATTCAGTAATGAG 1095 Query 1114 AGTGAAGTCGCTGACTATGTCACTCAAATCACACCCTTTCTCTGTCTATCAATTGGTGTT 1173 |||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||| Sbjct 1096 AGTGAAGTCGCTGACTATGTAACTCAAATCACACCCTTTCTATGCCTATCAATTGGTGTT 1155 Query 1174 GACAGCTTTCTCGCCGTACTCTCAGGAGTTGCTAGAGGAACAGGGTGGCAACATATAGGA 1233 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1156 GACAGCTTTCTCGCCGTACTCTCAGGAGTTGCTAGAGGAACAGGGTGGCAACATATAGGA 1215 Query 1234 GCTTATGCAAACATAGGATCGTATTATCTAGTCGGGATCCCGGTAGGTTCAATCTTGTGT 1293 ||||||||||||||||| || |||||||| ||||| |||||||||||||| ||||||||| Sbjct 1216 GCTTATGCAAACATAGGGTCATATTATCTGGTCGGTATCCCGGTAGGTTCGATCTTGTGT 1275 Query 1294 TTTGTAGTGAAATTGAGAGGGAAAGGACTTTGGATCGGTATATTGGTAGGTTCCACTCTA 1353 || || ||||||||||||||||||||||||||||||||||||||| | || || ||| || Sbjct 1276 TTCGTTGTGAAATTGAGAGGGAAAGGACTTTGGATCGGTATATTGATTGGCTCTACTTTA 1335 Query 1354 CAAACGATTGTTCTTGCTCTTGTCACTTTCTTCACCAATTGGGAACAAGAGGTAGCGAAG 1413 |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| Sbjct 1336 CAAACGATTGTTCTTGCTCTTGTCACTTTCTTCACCAATTGGGAACAAGAGGCAGTGAAG 1395 Query 1414 GCTAGAGACAGAGTAATCGAGATGATACCACAAGA-AATCA 1453 |||||||||||||||| |||||||| | |||||| ||||| Sbjct 1396 GCTAGAGACAGAGTAACCGAGATGACATCACAAGGCAATCA 1436 > Ahg907722 jgi|Araly1|907722|Al_scaffold_0002_803 Length=1503 Score = 1234 bits (668), Expect = 0.0 Identities = 1151/1382 (83%), Gaps = 42/1382 (3%) Strand=Plus/Plus Query 87 TTATTTGTCAACAGAGATGATGAAGAAGGTAAGCTT-CATGGCTGCACCAATGGTGGCTG 145 |||||||||| ||||||||||||||||| || || |||||| || ||||||||||| | Sbjct 63 TTATTTGTCAGTGGAGATGATGAAGAAGGTGAG-TTCCATGGCAGCTCCAATGGTGGCAG 121 Query 146 TGGCTGCTTCTCAATACCTCCTTCAAGTTATCTCCATTGTTATGGCTGGTCACTTGGACG 205 | | | |||||| | |||||| ||||| |||||||| |||||||||||||||||||||| Sbjct 122 TTTCGGTTTCTCAGTTCCTCCTGCAAGTCATCTCCATGGTTATGGCTGGTCACTTGGACG 181 Query 206 AGCTTTCTCTCTCAGCCGTTGCTATTGCCACTTCTCTTACCAATGTCACCGGCTTCAGCC 265 |||| || |||||||| ||||| || |||||||| || || ||||||||||| || |||| Sbjct 182 AGCTCTCACTCTCAGCTGTTGCAATCGCCACTTCCCTCACTAATGTCACCGGTTTTAGCC 241 Query 266 TCATCTTTGGATTGGCAGGTGCGTTAGAGACACTGTGTGGTCAAGCTTTTGGAGCTGGGC 325 ||||| |||| || ||||||||||||||||| ||||||||||||||||||||||| | | Sbjct 242 TCATCGTTGGGTTTGCAGGTGCGTTAGAGACTCTGTGTGGTCAAGCTTTTGGAGCAGAAC 301 Query 326 AATTTAGG-AATATCAGTGCATACACTTACGGCTCAATGCTATGTCTTCTCT-TGGTCTG 383 ||||| || || || | |||||||| ||| |||||||||| |||||||| | | |||| Sbjct 302 AATTT-GGAAAAATTGGGGCATACACGTACAGCTCAATGCTTTGTCTTCT-TGTCTTCTG 359 Query 384 TTTCCCAATCTCACTTTTGTGGGTTTTTATGGACAAACTCTTGGAGCTTTTCCATCAAGA 443 ||| ||| |||| ||| | ||| | || |||||||||||||||||||| ||||||||||| Sbjct 360 TTTTCCAGTCTCTCTTGTATGGATCTTCATGGACAAACTCTTGGAGCTCTTCCATCAAGA 419 Query 444 TCCTCTTATCTCTCAATTAGCTTGTAGATACTCAATCTGGCTCATACCGGCTTTATTCGG 503 |||||| |||||||| |||||||| ||||||||||||||||| ||||||||||||||||| Sbjct 420 TCCTCTAATCTCTCAGTTAGCTTGCAGATACTCAATCTGGCTAATACCGGCTTTATTCGG 479 Query 504 ATACT-CTGTTCTTCAATCTATGACTCGATTTTTCCAGTCACAAGGATTGGTTCTACCTC 562 || | || |||||||| |||||||| | | |||||||||||||||||| |||| |||| Sbjct 480 AT-TTGCTCTTCTTCAACCTATGACTTGCTATTTCCAGTCACAAGGATTAATTCTTCCTC 538 Query 563 TCTTCTTGAGCTCTCTTGGAGCTCTCTTTTTTCACGTTCCCTTTTC-G-TGGCTTCTTGT 620 ||||| ||||||||||||||||| ||| ||||||| || || |||| | ||||||||||| Sbjct 539 TCTTCGTGAGCTCTCTTGGAGCTATCTGTTTTCACATT-CC-TTTCTGTTGGCTTCTTGT 596 Query 621 CTATAAACTGAGATTCGGAATCGTCGGCGCCGCTTTGTCCATAGGTTTTTCGTATTGGCT 680 ||||||||||||||| |||||||| ||||||||||||||||| || ||||| |||||||| Sbjct 597 CTATAAACTGAGATTTGGAATCGTTGGCGCCGCTTTGTCCATCGGGTTTTCATATTGGCT 656 Query 681 CAACGTAG-GTTTGCTTTGGGCTTTCATGAG-AGACTCTGCTCT-CTATCGAAAAAACTG 737 |||||| | ||||||| || ||||||||| | |||||||| | | |||| ||| || Sbjct 657 CAACGT-GTTTTTGCTTCGGATTTTCATGAGTA-ACTCTGCTTTGC-ATCG-TGAAA-TG 711 Query 738 --GAATCTTCGG-GCACAAGAAATCTTTTTGAGCATGAAGCAGTTCATTACCCTAGCAAT 794 || ||| || |||||| || | | |||||||||||||||||| |||| || || Sbjct 712 AAAAACCTT-GGTTTGCAAGAACTCATCTCGAGCATGAAGCAGTTCATCGCCCTCGCTAT 770 Query 795 TCCCACTGCAATGATGACT-TGCCTGGAATGGTGGTCGTTTGAGCTTCTTA-TACTAATG 852 ||| |||||||||||| | |||||||||||||||||||||||| ||| || |||||||| Sbjct 771 CCCCTCTGCAATGATGA-TATGCCTGGAATGGTGGTCGTTTGAGATTC-TACTACTAATG 828 Query 853 TCAGGACTCTTACCAAACTCAAAGCTCGAAACATCGGTCCTATCCATTTGCCTAACAATG 912 || ||||||||||||||||||||||||||||||||||| ||||||||||||| |||| Sbjct 829 TCTGGACTCTTACCAAACTCAAAGCTCGAAACATCGGTGATATCCATTTGCCTCACAACA 888 Query 913 TCGTCTCTGCATTACGTTATCGTGAATGCCATAGGAGCAGCAGCGAGCACACATGTCTCA 972 ||| || |||||| |||| | |||||||| ||||||||| | || |||||| |||| ||| Sbjct 889 TCGGCTTTGCATTTCGTTCTGGTGAATGCGATAGGAGCATCCGCAAGCACATATGTTTCA 948 Query 973 AACAAGCTAGGAGCTGGAAATCCAAAGG-CAGCTCGATCTGCGGCTAATTCTGCGATTTT 1031 ||| |||||||||||||||||| | ||| |||||||| | |||| || ||| || ||||| Sbjct 949 AACGAGCTAGGAGCTGGAAATC-ACAGGGCAGCTCGAGCGGCGGTTAGTTCGGCTATTTT 1007 Query 1032 TCTTGGCA-TGATTGATGCAGCCATAGTAAGCATCAGTCTCTACAGCTACAGAAGAAA-T 1089 || || || |||||||| | |||| |||||||| || ||||| ||| ||| | | | Sbjct 1008 CCTGGGTGGTG-TTGATGCAACAATAGCAAGCATCACACTTTACAGTTACCGAA-ATAGT 1065 Query 1090 TGGGCTTATATATTCAGTAATGAGAGTGAAGTCGCTGACTATGTCACTCAAATCACACCC 1149 |||| |||||||||||| || |||| ||||| ||| |||| || || |||||||||||| Sbjct 1066 TGGGGTTATATATTCAGCAACGAGAAAGAAGTGGCTCACTACGTAACCCAAATCACACCC 1125 Query 1150 TTTCTCTGTCTATCAATTGGT-GTTGACAGCTTTCTCGCCGTACTCTCAGGAGTTGCTAG 1208 ||||||| |||| ||| | ||| |||| ||||| ||||| || ||||| ||||| || Sbjct 1126 ATTCTCTGCCTATTTATTT-TCGTTAACAGTTTTCTTGCCGTGCTATCAGGGGTTGCCAG 1184 Query 1209 AGGAACAGGGTGGCAACATATAGGAGCTTATGCAAACATAGGATCGTATTATCTAGTCGG 1268 ||||||||| ||||||| |||||||| |||||||| ||||||| |||||||| ||||| Sbjct 1185 AGGAACAGGCTGGCAACGTATAGGAGGTTATGCAAGTTTAGGATCATATTATCTTGTCGG 1244 Query 1269 GATCCCGGTAGGTTCAATCTTGTGTTTTGT-AGTGAAATTGAGAGGGAAAGGACTTTGGA 1327 |||||| |||||| |||||||||||||| | |||| |||||||| ||||||||||||| Sbjct 1245 AATCCCGTTAGGTTGGATCTTGTGTTTTGTCA-TGAAGTTGAGAGGAAAAGGACTTTGGA 1303 Query 1328 TCGGTATATTGGTAGGTTCCACTCTACAAACGAT-TGTTCTTGCTCTTGTCACTTTCTTC 1386 | |||||| | ||| |||||| | ||| | | |||| || | |||||||| |||||| Sbjct 1304 TTGGTATACTCATAGCCTCCACTATCCAA-CTAAGTGTTTTTACCCTTGTCACCTTCTTC 1362 Query 1387 ACCAATTGGGAACAAGAGGTAGCGA-AGGCTAGAGACAGAGTAATCGAGATGATACCACA 1445 ||||||||||||||||||| | ||| || | |||||||||||| ||||||||| |||||| Sbjct 1363 ACCAATTGGGAACAAGAGGCAACGAGAGCC-AGAGACAGAGTATTCGAGATGACACCACA 1421 Query 1446 AG 1447 || Sbjct 1422 AG 1423 > Ahg925784 jgi|Araly1|925784|scaffold_201345.1 Length=635 Score = 671 bits (363), Expect = 0.0 Identities = 411/435 (94%), Gaps = 0/435 (0%) Strand=Plus/Plus Query 220 GCCGTTGCTATTGCCACTTCTCTTACCAATGTCACCGGCTTCAGCCTCATCTTTGGATTG 279 ||||||||||| || |||||||||||||| |||||||||||||||||| ||||||||||| Sbjct 132 GCCGTTGCTATCGCTACTTCTCTTACCAACGTCACCGGCTTCAGCCTCCTCTTTGGATTG 191 Query 280 GCAGGTGCGTTAGAGACACTGTGTGGTCAAGCTTTTGGAGCTGGGCAATTTAGGAATATC 339 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct 192 GCAGGTGCGTTAGAGACACTGTGTGGTCAAGCTTTTGGAGCTGAGCAATTTAGGAAAATC 251 Query 340 AGTGCATACACTTACGGCTCAATGCTATGTCTTCTCTTGGTCTGTTTCCCAATCTCACTT 399 ||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||| Sbjct 252 GGTGCATACACTTATAGCTCAATGCTATGTCTTCTCTTGTTTTGTTTCCCAATCTCACTT 311 Query 400 TTGTGGGTTTTTATGGACAAACTCTTGGAGCTTTTCCATCAAGATCCTCTTATCTCTCAA 459 ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct 312 TTGTGGGTTTTTATGGACAAACTATTGGAGCTTTTCCATCAAGATCCTCTCATCTCTCAT 371 Query 460 TTAGCTTGTAGATACTCAATCTGGCTCATACCGGCTTTATTCGGATACTCTGTTCTTCAA 519 |||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||| Sbjct 372 TTAGCTTGTAGATATTCGATCTGGCTTATACCGGCTTTATTCGGATACTCTGTTCTTCAA 431 Query 520 TCTATGACTCGATTTTTCCAGTCACAAGGATTGGTTCTACCTCTCTTCTTGAGCTCTCTT 579 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 432 TCTATGACTCGGTTTTTCCAGTCACAAGGATTGGTTCTACCTCTCTTCTTGAGCTCTCTC 491 Query 580 GGAGCTCTCTTTTTTCACGTTCCCTTTTCGTGGCTTCTTGTCTATAAACTGAGATTCGGA 639 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct 492 GGAGCTCTCTGTTTTCACATTCCCTTTTCGTGGCTTCTTGTCTATAAACTGAGATTTGGA 551 Query 640 ATCGTCGGCGCCGCT 654 |||||| |||| ||| Sbjct 552 ATCGTCAGCGCTGCT 566 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 54545230840 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5