BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G68090.1 Length=951 Score E Sequences producing significant alignments: (Bits) Value Ahg315818 jgi|Araly1|315818|fgenesh1_pm.C_scaffold_2000851 1604 0.0 > Ahg315818 jgi|Araly1|315818|fgenesh1_pm.C_scaffold_2000851 Length=951 Score = 1604 bits (868), Expect = 0.0 Identities = 923/950 (97%), Gaps = 2/950 (0%) Strand=Plus/Plus Query 1 ATGGCAACAATGAAAATACCAATGACGGTACCTTCTCCTCGAGTCGATGCTGACCAACTC 60 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1 ATGGCAACAATGAAAATACCAATGACGGTACCTTCTCCTCGAATCGATGCTGACCAACTC 60 Query 61 TTTAAGGCCTTCAAAGGAAGAGGCTGCGATACTTCGGTGATCATCAACATCTTAGCTCAT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 TTTAAGGCCTTCAAAGGAAGAGGCTGCGATACTTCGGTGATCATCAACATCTTAGCTCAT 120 Query 121 CGCAATGCAACACAACGAGCTCTCATCGAACAAGAATACGAAACCAAATTCTCGGATGAC 180 ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 121 CGCAATGCAACGCAACGAGCTCTTATCGAACAAGAATACGAAACCAAATTCTCGGATGAC 180 Query 181 CTCCGAAAACGTCTCCACTCTGAGCTTCATGGTCATCTCAAGAAAGCCGTTCTTTTGTGG 240 || |||||||||||||| || ||||||||||||||||||||||||||||||||| ||||| Sbjct 181 CTTCGAAAACGTCTCCAATCCGAGCTTCATGGTCATCTCAAGAAAGCCGTTCTTCTGTGG 240 Query 241 ATGCCTGAAGCAGTGGAGCGAGACGCTTCAATACTGAAACGCTCCTTAAGAGGAGCCGTG 300 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 241 ATGCCTGAAGCAGTGGAGCGAGACGCTTCAATACTGAAACGCTGCTTAAGAGGAGCCGTG 300 Query 301 ACTGATCATAAAGCGATTGCTGAGATTATATGCACACGATCTGGCTCTCAGCTTCGTCAG 360 |||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct 301 ACTGATCACAAAGCGGTTGCTGAGATTATATGTACACGATCTGGCTCTCAGCTTCGTCAG 360 Query 361 ATCAAACAGGTCTACT-CAAACACTTTCGGTGTGAAACTTGAAGAGGACATCGAATCCGA 419 |||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||| Sbjct 361 ATCAAACAGGTCTACTGC-AACACTTACGGTGTGAAACTTGAAGAGGACATCGAATCCGA 419 Query 420 AGCTTCTGGCAATCACAAAAGAGTTTTGCTCGCGTATTTGAACACTACGCGATATGAAGG 479 ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct 420 AGCTTCTGGCAATCACAAAAGAGTTTTGCTCGCATATTTGAACACTACACGATATGAAGG 479 Query 480 ACCAGAGATCGATAATGCGAGTGTAGAGAACGATGCTAGGACTCTCAAGAGCGCGGTTGC 539 ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct 480 ACCAGAGATCGATAATGCGAGTGTAGAGAACGATGCTAGGACTCTCAAGAGTGCAGTTGC 539 Query 540 AAGGAAGCATAAATCTGATGACCAGACGTTGATTCAGATATTCACTGACCGAAGCAGGAC 599 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 540 GAGGAAGCATAAATCTGATGACCAGACGTTGATTCAGATATTCACTGACCGAAGCAGGAC 599 Query 600 TCATTTGGTCGCTGTAAGATCTACTTACCGTTCCATGTACGGCAAAGAACTTGGAAAGGC 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 600 TCATTTGGTCGCTGTAAGATCTACTTACCGTTCCATGTACGGCAAAGAACTTGGAAAGGC 659 Query 660 CATAAGAGATGAGACTCGCGGGAACTTCGAGCATGTCCTTCTAACAATTTTACAATGTGC 719 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct 660 CATAAGAGATGAGACTCGCGGGAACTTCGAGCACGTCCTTCTAACAATTCTACAATGTGC 719 Query 720 TGAAAACTCTTGTTTCTATTTCGCAAAGGCATTGAGGAAATCAATGAAAGGATTAGGAAC 779 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 720 TGAAAACTCTTGTTTCTATTTCGCAAAGGCACTGAGGAAATCAATGAAAGGATTAGGAAC 779 Query 780 AGATGACACGGCGTTGATAAGAATCGTGGTGACGAGAGCAGAGGTGGATATGCAGTTCAT 839 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 780 AGATGACACGGCGTTGATAAGAATATTGGTGACGAGAGCAGAGGTGGATATGCAGTTCAT 839 Query 840 CATCACAGAATACCGTAAGAGATACAAGAAGACTTTGTACAATGCTGTTCATTCTGATAC 899 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 840 CATCACAGAATACCGCAAGAGATACAAGAAGACTTTGTACAATGCTGTTCATTCTGATAC 899 Query 900 AACTAGTCATTACAGGACTTTTCTCCTCTCTCTTTTAGGCCCCAACGTTT 949 |||| |||||||||||||||||||||||||||||||||| |||||||||| Sbjct 900 AACTGGTCATTACAGGACTTTTCTCCTCTCTCTTTTAGGACCCAACGTTT 949 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 35301821142 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5