BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G68560.1
Length=3106
Score E
Sequences producing significant alignments: (Bits) Value
Ahg926139 jgi|Araly1|926139|scaffold_201700.1 4473 0.0
Ahg897024 jgi|Araly1|897024|Al_scaffold_0005_990 1978 0.0
Ahg484972 jgi|Araly1|484972|fgenesh2_kg.5__964__AT3G45940.1 1064 0.0
> Ahg926139 jgi|Araly1|926139|scaffold_201700.1
Length=2791
Score = 4473 bits (2422), Expect = 0.0
Identities = 2672/2794 (96%), Gaps = 11/2794 (0%)
Strand=Plus/Plus
Query 87 AAAGTACCACTCTATAGCCATGGcttc--c-tcttcttcatctctagctttctctctttc 143
||||| |||||||||||||||||||| | | |||||||||||||||||||||||||||
Sbjct 2 AAAGTTTCACTCTATAGCCATGGCTTCTTCTTGTTCTTCATCTCTAGCTTTCTCTCTTTC 61
Query 144 tcttcttctagctttaatcctctgtttctcACCCACCCAATCCTACAAAACCATCGGCAA 203
|||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 62 TCTTTTTCTAGCTTTAATCCTCTGTTTCTCACCCACCCAATCCTCCAAAACCATCGGCAA 121
Query 204 AGGCTACCGTTTGGTCTCCATCGAAGAATCTCCCGACGGTGGTTTCATTGGTTATCTCCA 263
||||||||||||| ||||||||||||||||||| || ||||| ||||||||||| |||||
Sbjct 122 AGGCTACCGTTTGATCTCCATCGAAGAATCTCCAGATGGTGGCTTCATTGGTTACCTCCA 181
Query 264 AGTCAAACAAAAGAACAAAATCTACGGCTCTGATATCACCACTCTTCGTCTCTTCGTCAA 323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 182 AGTCAAACAAAAGAACAAAATCTACGGCTCTGATATCACCACTCTTCGTCTCTTCGTCAA 241
Query 324 GCACGAAACTGATTCACGTCTTCGTGTTCACATCACTGACGCGAAACAACAACGATGGGA 383
||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 242 GCACGAAACAGATTCACGTCTTCGTGTTCACATCACAGACGCGAAACAACAACGATGGGA 301
Query 384 AGTTCCATACAATCTCCTCCCACGAGAACAACCACCACAAGTCGGAAAAGTCATCGGAAA 443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 302 AGTTCCATACAATCTCCTCCCACGAGAACAACCACCACAAGTCGGAAAAGTCATCGGAAA 361
Query 444 ATCAAGAAAATCTCCAATCACAGTTCAAGAAATCTCCGGATCCGAACTTATCTTCAGTTA 503
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 362 ATCAAGAAAATCTCCAATCACAGTTCAAGAAATCTCCGGATCCGAACTAATCTTCAGTTA 421
Query 504 CACAACAGATCCATTCACTTTCGCCGTGAAACGTAGATCTAACCACGAAACACTCTTCAA 563
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct 422 CACAACAGATCCATTCACTTTCGCCGTAAAACGTAGATCTAACCATGAAACACTCTTCAA 481
Query 564 CACAACAAGCTCATTAGTGTTCAAAGATCAATACCTAGAGATCTCAACTTCATTACCAAA 623
||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct 482 CACCTCAAGCTCATTAGTATTCAAAGATCAATACCTAGAGATCTCAACTTCGTTACCAAA 541
Query 624 AGAAGCTTCACTCTATGGTTTAGGTGAAAACTCACAAGCTAATGGTATCAAACTCGTACC 683
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 542 AGAAGCATCACTCTATGGTTTAGGTGAAAACTCACAAGCTAATGGTATCAAACTCGTACC 601
Query 684 TAACGAGCCTTATACTCTTTACACTGAAGATGTTTCAGCTATCAATCTTAACACTGACCT 743
||||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||
Sbjct 602 TAACGAGCCTTATACTCTTTACACTGAAGATGTTTCAGCCATTAATCTTAACACTGATCT 661
Query 744 TTATGGTTCGCATCCGATGTATATGGATCTAAGAAACGTTGGAGGTAAAGCTTATGCTCA 803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 662 TTATGGTTCGCATCCGATGTATATGGATCTAAGAAACGTTGGAGGTAAAGCTTATGCTCA 721
Query 804 TGCTGTTCTTCTT--TTGAATAGTAATGGTATGGATGTTTTCTATAGAGGTGATTCTTTG 861
|||||| || || || |||||||||||||||||||||||||||||||||||||| |||
Sbjct 722 TGCTGTG-TTGTTGCTT-AATAGTAATGGTATGGATGTTTTCTATAGAGGTGATTCGTTG 779
Query 862 ACGTATAAAGTTATCGGAGGTGTTTTCGATTTCTATTTCATCGCCGGACCGTCGCCGTTA 921
|||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||
Sbjct 780 ACGTATAAAGTTATCGGAGGTGTTTTTGACTTCTATTTCATCGCCGGACCTTCGCCGTTA 839
Query 922 AATGTTGTTGATCAGTATACTCAGTTAATCGGAAGACCTGCTCCTATGCCGTACTGGTCT 981
||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct 840 AATGTTGTTGATCAGTATACTCAGTTAATCGGAAGGCCTGCTCCAATGCCGTACTGGTCT 899
Query 982 TTAGGATTTCATCAATGTAGATGGGGATACCATAATCTATCAGTTGTTGAAGATGTGGTG 1041
||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||
Sbjct 900 TTAGGATTTCATCAATGTAGATGGGGATATCATAATTTATCAGTTGTTGAAGATGTGGTG 959
Query 1042 GATAATTACAAAAAGGCTAAGATCCCACTTGATGTGATTTGGAACGATGATGATCACATG 1101
||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct 960 GATAATTACAAAAAGGCTAAGATTCCTCTTGATGTGATTTGGAACGATGATGATCACATG 1019
Query 1102 GATGGTCACAAAGATTTCACGTTGAATCCTGTGGCTTATCCTCGTGCTAAGCTATTGGCG 1161
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct 1020 GATGGTCACAAAGATTTCACTTTGAATCCAGTGGCTTATCCTCGTGCTAAGCTATTGGCG 1079
Query 1162 TTCTTGGACAAAATCCACAAGATTGGAATGAAGTATATTGTGATCAATGATCCTGGTATT 1221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1080 TTCTTGGACAAAATCCACAAGATTGGAATGAAGTATATTGTGATCAATGATCCTGGTATT 1139
Query 1222 GGTGTCAACGCTAGCTACGGTACATTTCAGAGAGCCATGGCTGCTGATGTGTTTATTAAG 1281
||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||
Sbjct 1140 GGTGTCAACGCTAGCTACGGTACATATCAAAGAGCCATGGCCGCTGATGTGTTTATTAAG 1199
Query 1282 TATGAAGGAAAGCCATTCTTGGCTCAAGTGTGGCCTGGTCCGGTTTACTTCCCTGATTTC 1341
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1200 TATGAAGGAAAGCCTTTCTTGGCTCAAGTGTGGCCTGGTCCGGTTTACTTCCCTGATTTC 1259
Query 1342 CTTAACCCGAAGACGGTTTCTTGGTGGGGTGATGAAATCAAACGGTTCCATGATTTAGTC 1401
||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct 1260 CTTAACCCGAAGACGGTTTCTTGGTGGGGAGATGAAATCAAACGCTTCCATGATTTAGTC 1319
Query 1402 CCTATTGATGGTTTATGGATTGACATGAACGAGGTGTCGAACTTTTGTTCTGGTTTATGC 1461
|||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct 1320 CCTATTGATGGTCTATGGATTGACATGAACGAGGTGTCGAACTTTTGCTCTGGTTTGTGC 1379
Query 1462 ACAATCCCTGAAGGAAAGCAGTGTCCAAGTGGGGAAGGTCCTGGTTGGGTTTGTTGCTTG 1521
|||||||| | || ||||| ||||| ||||||||||| |||||||||||||||||||||
Sbjct 1380 ACAATCCCACAGGGGAAGCAATGTCCGAGTGGGGAAGGACCTGGTTGGGTTTGTTGCTTG 1439
Query 1522 GACTGCAAGAATATAACCAAGACTAGATGGGATGATCCTCCTTACAAGATTAATGCTACT 1581
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1440 GACTGCAAGAATATTACCAAGACTAGATGGGATGATCCTCCTTACAAGATTAATGCTACT 1499
Query 1582 GGTGTCGTAGCTCCTGTTGGGTTCAAGACTATTGCTACAAGTGCTACTCATTACAATGGT 1641
|| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct 1500 GGAGTCGTAGCTCCTGTTGGGTTCAAGACTATTGCCACAAGTGCTACACATTACAATGGT 1559
Query 1642 GTTCGAGAGTACGATGCTCACAGTATCTACGGATTCTCTGAGACCATCGCAACTCACAAG 1701
||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct 1560 GTTCGAGAGTATGATGCTCACAGTATCTACGGGTTCTCTGAGACCATCGCGACTCACAAG 1619
Query 1702 GGCTTACTTAATGTCCAAGGCAAACGTCCCTTCATTTTATCCCGGTCTACTTTCGTTGGT 1761
||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1620 GGCTTACTTGATGTCAAAGGCAAACGTCCCTTCATTTTATCCCGGTCTACTTTCGTGGGT 1679
Query 1762 TCGGGTCAATATGCGGCTCACTGGACCGGAGATAACCAAGGAACATGGCAGAGCTTGCAA 1821
|||||| ||||||| ||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 1680 TCGGGTAAATATGCCGCTCACTGGACTGGAGATAATCAAGGAACATGGCAGAGCTTGCAA 1739
Query 1822 GTGTCTATCTCAACTATGTTGAACTTCGGTATATTTGGAGTTCCCATGGTTGGTTCAGAC 1881
|||||||||||||| |||||||| || ||||| |||||||||||||||||||||||||||
Sbjct 1740 GTGTCTATCTCAACCATGTTGAATTTTGGTATCTTTGGAGTTCCCATGGTTGGTTCAGAC 1799
Query 1882 ATTTGTGGATTCTACCCACAACCAACAGAAGAACTCTGCAACCGTTGGATCGAAGTAGGC 1941
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct 1800 ATTTGTGGATTCTACCCTCAACCAACAGAAGAACTCTGCAACCGTTGGATCGAAGTTGGC 1859
Query 1942 GCGTTTTACCCGTTTTCAAGAGATCACGCCAATTACTACTCACCAAGACAAGAGCTTTAC 2001
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1860 GCGTTTTACCCGTTTTCAAGAGATCACGCCAATTACTACTCACCAAGACAAGAGCTTTAC 1919
Query 2002 CAATGGGACACAGTTGCAGACTCAGCTCGTAACGCTCTTGGTATGAGATACAAGATCCTT 2061
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct 1920 CAATGGGACACAGTTGCAGACTCAGCTCGTAACGCTCTTGGTATGAGATATAAAATCCTT 1979
Query 2062 CCTTTCCTCTACACTCTTAACTACGAAGCGCATATGACTGGTGCACCCATCGCTAGACCG 2121
||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||
Sbjct 1980 CCTTTCCTCTACACTCTCAACTACGAAGCCCATATGACCGGTGCACCCATCGCTAGACCG 2039
Query 2122 CTCTTCTTCTCATTCCCTGAATACACCGAATGTTACGGCAACAGCAGACAGTTCTTGCTT 2181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2040 CTCTTCTTCTCATTCCCTGAATACACCGAATGTTACGGCAACAGCAGACAGTTCTTGCTT 2099
Query 2182 GGAAGCAGCTTCATGATATCTCCGGTTCTCGAGCAAGGCAAAACCGAAGTAGAAGCATTG 2241
||||||||||| ||||||||||| ||||| || ||||||||||||||||||||||||||
Sbjct 2100 GGAAGCAGCTTAATGATATCTCCCGTTCTTGAAAAAGGCAAAACCGAAGTAGAAGCATTG 2159
Query 2242 TTCCCACCAGGTTCTTGGTACCACATGTTCGACATGACTCAAGC-AGTAGTGTCCAAGAA 2300
|||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct 2160 TTCCCACCAGGTTCTTGGTACCACATGTTCGACATGACTCAAGCCA-TAGTGTCCAAGAA 2218
Query 2301 CGGGAAACGTGTAACTCTCCCAGCTCCTTTGAACTTTGTGAACGTTCATCTTTACCAAAA 2360
||||| || ||||||||| |||||||||||||||||||||||||||| |||||||||||
Sbjct 2219 TGGGAAGCGCGTAACTCTCTCAGCTCCTTTGAACTTTGTGAACGTTCACCTTTACCAAAA 2278
Query 2361 CACTATCTTACCAACGCAACAAGGCGGGTTGATTTCCAAGGACGCAAGAACAACACCGTT 2420
|||||| ||||||| ||||||||||||||| |||||||| ||||| ||||| ||||||||
Sbjct 2279 CACTATATTACCAATGCAACAAGGCGGGTTAATTTCCAAAGACGCGAGAACCACACCGTT 2338
Query 2421 TAGCCTCGTCATTGCTTTCCCTGCAGGAGCTTCTGAAGGTTACGCCACCGGGAAACTCTA 2480
||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 2339 TAGCCTCGTCATTACTTTCCCTGCTGGAGCTTCTGAGGGTTACGCCACCGGGAAACTCTA 2398
Query 2481 TCTAGACGAAGACGAGCTTCCGGAAATGAAGCTAGGAAATGGACAGTCCACGTACGTTGA 2540
|||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct 2399 TCTAGACGAAGACGAGCTCCCCGAAATGAAGCTAGGAAATGGACAGTCCACGTACGTTGA 2458
Query 2541 CTTCTACGCTTCGGTCGGAAACGGGACAATGAAGATGTGGTCACAAGTTAAAGAAGGTAA 2600
||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2459 CTTCTACGCTTCGGTTGGAAACGGGACTGTGAAGATGTGGTCACAAGTTAAAGAAGGTAA 2518
Query 2601 GTTTGCATTGAGCAAAGGATGGGTGATTGAGAAAGTGAGTGTTTTGGGACTTAGAGGAGC 2660
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct 2519 GTTTGCATTGAGCAAAGGATGGGTGATTGAGAAAGTGAGTGTTTTGGGACTTAAAGGAAC 2578
Query 2661 AGGACAAG-TGTCTGAGATTCAAATCAATGGAAGTCCAATGACAAAGAAGATTGAGGTTA 2719
|||||||| | |||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct 2579 AGGACAAGCT-TCTGAGATTCAAATCAATGGCAGTCCAATGACAAAGAAGATTGAGGTAA 2637
Query 2720 GCTCGAAGGAGCATACCTATGTGATTGGTTTGGAAGATGAAGAAGAGAACAAGAGTGTGA 2779
|||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2638 GCTCGAAGGAACATACATATGTGATTGGTTTGGAAGATGAAGAAGAGAACAAGAGTGTGA 2697
Query 2780 TGGTTGAGGTTAGAGGACTTGAGATGCTTGTTGGAAAGGATTTTAACATGTCCTGGAAAA 2839
|||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||
Sbjct 2698 TGGTTGAGGTTAGAGGTCTTGAGATGCTTGTTGGTAAGGACTTTAACATGTCCTGGAAAA 2757
Query 2840 TGGGTATCAATTAATTTACATGTGAGAGTTGGTA 2873
||||||||||||||||||||||||||||||||||
Sbjct 2758 TGGGTATCAATTAATTTACATGTGAGAGTTGGTA 2791
> Ahg897024 jgi|Araly1|897024|Al_scaffold_0005_990
Length=2241
Score = 1978 bits (1071), Expect = 0.0
Identities = 1695/1993 (85%), Gaps = 55/1993 (3%)
Strand=Plus/Plus
Query 589 GATCAATACCTAGAGATCTCAACTTCATTACCAAAAGAAGCTTCACTCTATGG-TTTAGG 647
||||| ||||| ||||||||||||||| |||| ||||| | || || ||||| ||| ||
Sbjct 1 GATCAGTACCTTGAGATCTCAACTTCACTACCCAAAGACTCGTCTCTGTATGGATTT-GG 59
Query 648 TGAAAACTCACAAGCTAATGGTATCAAACTCGTACCTAACGAGCCTTATACTCTTTACAC 707
||||||||||||| | ||||| ||||| || || ||||| |||||||| ||||||| |||
Sbjct 60 TGAAAACTCACAACCCAATGGAATCAAGCTTGTTCCTAATGAGCCTTACACTCTTTTCAC 119
Query 708 TGAAGATGTTTCAGC-TATCAATCTTAACACTGACCTTTATGGTTCGCATCC-GATGTAT 765
|||||| || || || | | || || ||||| || ||||| || || || || | | ||
Sbjct 120 TGAAGACGTCTCGGCGT-TTAAACTCAACACCGATCTTTACGGGTCACACCCTG-TTTAC 177
Query 766 ATGGATCTAAGAAACGTTGGAGGTAAAGCTTATGCTCA-TGCTGTTCTTCTTTTGAATAG 824
|||||| | ||||||||| |||||||| | || || || | ||||||| ||| | || ||
Sbjct 178 ATGGATTTGAGAAACGTTAGAGGTAAATCCTACGCACACT-CTGTTCTGCTTCTCAACAG 236
Query 825 TAATGGTATGGATGT-TTTCTATAGAGGTGATTCTTTGACGTATAAAGTTATCGGAGGTG 883
||||||||||||||| || || ||||| | ||| |||||||| || || || |||||||
Sbjct 237 TAATGGTATGGATGTGCTT-TACAGAGGCGGTTCCTTGACGTACAAGGTAATTGGAGGTG 295
Query 884 TTTTCGATTTCTATTTCATCGCCGGACCGTCGCCGT-TAAATGTTGTTGATCAGTATAC- 941
||||||||||||||||| | || ||||||||||| | | ||||| |||||||| || ||
Sbjct 296 TTTTCGATTTCTATTTCTTTGCTGGACCGTCGCC-TCTCAATGTCGTTGATCAATACACT 354
Query 942 TCAGTTAATCGGAAGACCTGCTCCTATGCCGTACTGGTCTTTAGGATTTCATCAATGTAG 1001
|| |||||||||||| || || || ||||||||||||||| | |||||||||||||||
Sbjct 355 TC-GTTAATCGGAAGGCCAGCACCAATGCCGTACTGGTCTCT---ATTTCATCAATGTAG 410
Query 1002 ATGGGGATACCATAATCTATCAGTTGTTGAAGATGTGGTGGATAATTA-CAAAAAGGCTA 1060
||||||||||| |||| |||||||| ||||||| |||||||||||||| | |||||||||
Sbjct 411 ATGGGGATACCGTAATGTATCAGTTCTTGAAGAAGTGGTGGATAATTATC-AAAAGGCTA 469
Query 1061 AGATCCCACTTGATGTGATTTGGAACGATGATGATCACATGGATGGTCACAAAGATTTCA 1120
||||||| |||||||||||||||||||||| |||| ||||||||||| |||| || ||||
Sbjct 470 AGATCCCTCTTGATGTGATTTGGAACGATGCTGATTACATGGATGGTTACAAGGACTTCA 529
Query 1121 CGTTGAATCCTGTG-GCTTATCCTCGTGCTAAGCTATTGGCGTTCTTGGACAAAATCCAC 1179
| ||| ||| |||| ||| ||||| ||||||||||||||| |||||||| | |||||||
Sbjct 530 CATTGGATCTTGTGAACTT-TCCTCATGCTAAGCTATTGGCTTTCTTGGATAGAATCCAC 588
Query 1180 AAGATTGGAATGAAGTATATTGTGATCAATGATCCTGGTATTGGTGTCAACGCTAGCTAC 1239
||||| |||||||||||| ||||||| |||||||||||||||||||||||||| ||||||
Sbjct 589 AAGATGGGAATGAAGTATGTTGTGATAAATGATCCTGGTATTGGTGTCAACGCGAGCTAC 648
Query 1240 GGTACATTT--CAGAGAGCCATGGCTGCTGATGTGTTTATTAAGTATGAAGGAAAGCCAT 1297
||| ||| || |||| ||||||| ||||||||| ||||| |||||||||||||| |
Sbjct 649 GGT--GTTTACCAAAGAGGCATGGCTAATGATGTGTTCATTAAATATGAAGGAAAGCCTT 706
Query 1298 TCTTGGCTCAAGTGTGGCCTGGTCCGGTTTACTTCCCTGATTTCCTTAACCCGAAGACGG 1357
||||||||||| |||||||||||||||||||||||||||||||||| ||||| || ||||
Sbjct 707 TCTTGGCTCAAATGTGGCCTGGTCCGGTTTACTTCCCTGATTTCCTCAACCCAAAAACGG 766
Query 1358 TTTCTTGGTGGGGTGATGAAATCAAACGGTTCCATGATTTAGTCCCTATTGATGGT-TTA 1416
| ||||||||||||||||||||| ||| |||||||| |||||||| ||||||||| ||
Sbjct 767 TGTCTTGGTGGGGTGATGAAATCCGACGTTTCCATGAATTAGTCCCCATTGATGGTCTT- 825
Query 1417 TGGATTGACATGAACGAGGTGTCGAACTTT-TGTTCTGGTTTATGCACAATCCCTGAAGG 1475
||||| |||||||| ||||| || || ||| || ||||| || ||||||||||| || ||
Sbjct 826 TGGATCGACATGAATGAGGTCTCCAA-TTTCTGCTCTGGATTGTGCACAATCCCGGAGGG 884
Query 1476 -AAAGCAGTGTCCAAGTGGGGAAGGTCCTGGT-TGG-GTTTGTTGCTTGGACTGCAAGAA 1532
||| |||||||| ||||||| || |||||| || || |||||||||||||||||||
Sbjct 885 GAAA-CAGTGTCCGAGTGGGGGAGAACCTGGTGTGACGT--GTTGCTTGGACTGCAAGAA 941
Query 1533 TATAACCAAGACTAGATGGGATGATCCTCCTTACAAGATTAATGCTACTGGTGTCGTAGC 1592
||||||||| || |||||||||||||| ||||||||||| ||||||||||| | |||
Sbjct 942 TATAACCAATACGAGATGGGATGATCCACCTTACAAGATCAATGCTACTGGAAACAAAGC 1001
Query 1593 TCCTGTTGGGTTCAAGACTATTGCTACAAGTGCT-ACTCATTACAATGGTGTTCGAGAGT 1651
|||| |||| |||||||||||| | ||||||||| | ||| |||||||||||||| ||||
Sbjct 1002 TCCTCTTGGATTCAAGACTATTCCCACAAGTGCTTA-TCACTACAATGGTGTTCGTGAGT 1060
Query 1652 ACGATGCTCACAGTATCTACGGATTCTCTGAGACCATCGCAACTCAC-AAGGGCTTACTT 1710
|||| |||||||| |||||||| ||||||||| ||||| | || || |||| |||||||
Sbjct 1061 ACGACGCTCACAGCATCTACGGGTTCTCTGAGGCCATCTCGAC-CAATAAGGCCTTACTT 1119
Query 1711 AATGTCCAAGGCAAACGTCCCTTCATTTTATCCCGGTCTACTTTCGTTGGTTCGGGTCAA 1770
||||||||||||||||||||||||| || || ||||| ||||| |||||||| ||||||
Sbjct 1120 GATGTCCAAGGCAAACGTCCCTTCATATTGTCACGGTCCACTTTTGTTGGTTCAGGTCAA 1179
Query 1771 TATGCGGCTCACTGGACCGGAGATAACCAAGGAACATGGCAGAGCTTGCAAGTGTCTATC 1830
||||| ||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 1180 TATGCTGCTCACTGGACTGGAGATAACCAGGGAACATGGCAGAGCTTGCAAGTATCTATC 1239
Query 1831 TCAACTATGTTGAACTTCGGTATATTTGGAGTTCCCATGGTTGGTTCAGACATTTGTGGA 1890
||||| |||||||||||||| || ||||||||||| ||||||||||||||||| ||||||
Sbjct 1240 TCAACGATGTTGAACTTCGGAATTTTTGGAGTTCCTATGGTTGGTTCAGACATATGTGGA 1299
Query 1891 TTCTACCCAC-AACCAACAGAAGAACTCTGCAACCGTTGGATCGAAGTAGGCGCGTTTTA 1949
|||| || | ||| | ||||||||||||||||||||||||| ||||| || ||||||||
Sbjct 1300 TTCTTTCCTCCAAC-ACCAGAAGAACTCTGCAACCGTTGGATTGAAGTCGGTGCGTTTTA 1358
Query 1950 CCCGTTTTCAAGAGATCACGCCAATTACTACT-CACCAAGACAAGAGCTTTACCAATGGG 2008
||| |||||||||||||| ||| ||||||| | | |||||| ||||||||||||||||||
Sbjct 1359 CCCCTTTTCAAGAGATCATGCCGATTACTA-TGCGCCAAGAAAAGAGCTTTACCAATGGG 1417
Query 2009 -ACACAGTTGCAGACTCAGCTCGTAACGCTCTTGGTATGAGATACAAGA-TCCTTCCTTT 2066
| ||||| ||||| |||||||||||||||||||| ||||||||||| | ||||||||||
Sbjct 1418 GA-ACAGTAGCAGAGTCAGCTCGTAACGCTCTTGGGATGAGATACAA-ACTCCTTCCTTT 1475
Query 2067 CCTCTACACTCTTAACTACGAAGCGCATATGACTGGTGCACCCATCGCTAGACCGCTCTT 2126
||||||||||| ||||||||||| |||||||| |||||||| || ||||||||||||||
Sbjct 1476 TCTCTACACTCTCAACTACGAAGCCCATATGACGGGTGCACCAATTGCTAGACCGCTCTT 1535
Query 2127 CTTCTCATTCCCTGAATACACCGAATGTTACGGCAACAGCAGACAGTTCTTGCTTGGAAG 2186
|||||| |||||||| |||||||| || ||||| |||| |||||||||||| |||||
Sbjct 1536 CTTCTCTTTCCCTGATTACACCGAGTGCTACGGTTTGAGCAAACAGTTCTTGCTCGGAAG 1595
Query 2187 CAGCTTCATGATATCTCCGGTTCTCGAGCAAGGCAAAACCGAAGTAGAAGCAT-TGTTCC 2245
|||||| |||||||| || ||||| || ||||| |||||| |||| ||||| | ||||||
Sbjct 1596 CAGCTTAATGATATCACCAGTTCTTGAACAAGGTAAAACCCAAGTTGAAGC-TCTGTTCC 1654
Query 2246 CACCAGGTTCTTGGTACCACATGTTCGACATGACTCAAG-CAGTAGTGT-CCAAGAACGG 2303
|| ||||||||||||||||||| || ||||||||||| | | || | | ||||||||||
Sbjct 1655 CATCAGGTTCTTGGTACCACATTTTTGACATGACTCAGGTC-GTT-TATTCCAAGAACGG 1712
Query 2304 GAAACGTGTAACTCTCCCAGCTCCTTTGAACTTTGTGAACGTTCATCTTTACCAAAACAC 2363
||| || || ||||||| |||||| |||||| |||||||||| ||||||||||| |||||
Sbjct 1713 GAAGCGCGTGACTCTCCTAGCTCCGTTGAACGTTGTGAACGTGCATCTTTACCAGAACAC 1772
Query 2364 TATCTTACCAACGCAACAAGGCGGGTTGATTTCCAAGGACGCAAGAACAACACCGTTTAG 2423
|| ||||| | ||||||||| ||||| | |||||| || || |||||||| ||||||||
Sbjct 1773 GATATTACCGATGCAACAAGGTGGGTTAAATTCCAAAGAGGCGAGAACAACTCCGTTTAG 1832
Query 2424 CCTCGTCATTGCTTTCCCTGC-AGGAGCTTCTGAAGGTTACGCCACCGGGAAACTCTATC 2482
|| ||| | ||||||| || || ||| || || || ||||||||||||||||||| ||
Sbjct 1833 TCTGGTCGTCACTTTCCCGGCTAG-AGCATCAGAGGGATACGCCACCGGGAAACTCTTTC 1891
Query 2483 TAGACGAAGACGAGCTTCCGGAAATGAAGCTAGGAAATGGACAGTCCACGTACGTTGACT 2542
| ||||| || |||||||| || ||||| || ||||| |||||||| || ||||||||||
Sbjct 1892 TTGACGATGATGAGCTTCCAGAGATGAAACTTGGAAACGGACAGTCAACATACGTTGACT 1951
Query 2543 TCTACGCTTCGGT 2555
||||||| |||||
Sbjct 1952 TCTACGCATCGGT 1964
> Ahg484972 jgi|Araly1|484972|fgenesh2_kg.5__964__AT3G45940.1
Length=2508
Score = 1064 bits (576), Expect = 0.0
Identities = 1106/1350 (82%), Gaps = 83/1350 (6%)
Strand=Plus/Plus
Query 133 ttc-tctctttctcttcttctagct-ttaatcctctgtttctcACCCAC-CCAATCCTAC 189
||| ||||||||||||||| | ||| || |||||||| |||||| | | || | | |
Sbjct 6 TTCTTCTCTTTCTCTTCTTGTGGCTATT-ATCCTCTGCTTCTCA-TCTCTCCGGTGTTCC 63
Query 190 AAAACCATCGGCAAAGGCTACCGTTTGGTCTCCATCGAAGAA-TCTCCC---GACGGTGG 245
|| |||||||||||||||||||| | ||||||| | |||| |||||| || |||||
Sbjct 64 AACGCCATCGGCAAAGGCTACCGTCTAATCTCCATTG-AGAAGTCTCCCGATGATGGTGG 122
Query 246 TTTCATTGG-TTATCTCCAAGTCAAACAAAAG-AACAAAATCTACGGCTCTGATATCACC 303
|||||||| || ||||||||| || | | || ||||||||||| ||||||||||| |||
Sbjct 123 CTTCATTGGCTT-TCTCCAAGTGAAGC-AGAGTAACAAAATCTATGGCTCTGATATAACC 180
Query 304 ACT-CTTCGTCTCTTCGTCAAGCACGAAACTGATTCA-CGTCTTCGTGTTCACATCACTG 361
| | ||||| |||||| ||||||||||||| || ||| || |||||||||||||| || |
Sbjct 181 A-TCCTTCGACTCTTCATCAAGCACGAAACGGA-TCATCGCCTTCGTGTTCACATAACAG 238
Query 362 ACGCGAAACA-ACAACGATGGGAAGTTCCATACAATCTCCTCC-CACGAGAACAACCACC 419
|||| ||| | |||||||||||||||||| ||||||||||||| | ||||||| | |||
Sbjct 239 ACGC-AAAGAGACAACGATGGGAAGTTCCGTACAATCTCCTCCGC-CGAGAAC-A--ACC 293
Query 420 ACAAGTCGGAAAAGTCATCGGAAAATCAAGAAAATCTCCAATCACAGTTCAAGAAATCTC 479
|| | | | ||| ||||||||||||||||||||||| | || || || ||||| ||
Sbjct 294 AC----C-G-AGAGTAATCGGAAAATCAAGAAAATCTCCGGTTACGGTACAGGAAATATC 347
Query 480 CGGATCCGAACTT-ATCTTCAG-TTACACAACAGATCCATTCA-CTTTCGCCGTGA-AAC 535
|||| ||| | || || || || || ||| |||||||| |||| | |||||||||| ||
Sbjct 348 CGGA-CCGGAGTTGATATTGAGCTT-CACCACAGATCCTTTCAGC-TTCGCCGTGAGAA- 403
Query 536 GTAGATCTAACCACGAAAC-ACTCTTCAACAC-A--A---C--A--AG--C-TC----A- 576
| ||||| |||| ||| || | | |||||||| | | | | || | || |
Sbjct 404 GAAGATCCAACCGCGAGACGA-TTTTCAACACTAGTAGCTCTGATGAGAACTTCGGAGAG 462
Query 577 TTAGTGTTCAAAGATCAATACCTAGAGATCTCAACTTCATTACCAAAAGAAGCTTCACTC 636
| |||||||| ||||| ||||| ||||||||||||||| |||| ||||| | || ||
Sbjct 463 ATGGTGTTCAAGGATCAGTACCTTGAGATCTCAACTTCACTACCCAAAGACTCGTCTCTG 522
Query 637 TATGG-TTTAGGTGAAAACTCACAAGCTAATGGTATCAAACTCGTACCTAACGAGCCTTA 695
||||| ||| ||||||||||||||| | ||||| ||||| || || ||||| ||||||||
Sbjct 523 TATGGATTT-GGTGAAAACTCACAACCCAATGGAATCAAGCTTGTTCCTAATGAGCCTTA 581
Query 696 TACTCTTTACACTGAAGATGTTTCAGC-TATCAATCTTAACACTGACCTTTATGGTTCGC 754
||||||| ||||||||| || || || | | || || ||||| || ||||| || || |
Sbjct 582 CACTCTTTTCACTGAAGACGTCTCGGCGT-TTAAACTCAACACCGATCTTTACGGGTCAC 640
Query 755 ATCC-GATGTATATGGATCTAAGAAACGTTGGAGGTAAAGCTTATGCTCA-TGCTGTTCT 812
| || | | || |||||| | ||||||||| |||||||| | || || || | |||||||
Sbjct 641 ACCCTG-TTTACATGGATTTGAGAAACGTTAGAGGTAAATCCTACGCACACT-CTGTTCT 698
Query 813 TCTTTTGAATAGTAATGGTATGGATGT-TTTCTATAGAGGTGATTCTTTGACGTATAAAG 871
||| | || ||||||||||||||||| || || ||||| | ||| |||||||| || |
Sbjct 699 GCTTCTCAACAGTAATGGTATGGATGTGCTT-TACAGAGGCGGTTCCTTGACGTACAAGG 757
Query 872 TTATCGGAGGTGTTTTCGATTTCTATTTCATCGCCGGACCGTCGCCGT-TAAATGTTGTT 930
| || |||||||||||||||||||||||| | || ||||||||||| | | ||||| |||
Sbjct 758 TAATTGGAGGTGTTTTCGATTTCTATTTCTTTGCTGGACCGTCGCC-TCTCAATGTCGTT 816
Query 931 GATCAGTATAC-TCAGTTAATCGGAAGACCTGCTCCTATGCCGTACTGGTCTTTAGGATT 989
||||| || || || |||||||||||| || || || ||||||||||||||| |||| ||
Sbjct 817 GATCAATACACTTC-GTTAATCGGAAGGCCAGCACCAATGCCGTACTGGTCTCTAGGGTT 875
Query 990 TCATCAATGTAGATGGGGATACCATAATCTATCAGTTGTTGAAGATGTGGTGGATAATTA 1049
||||||||||||||||||||||| |||| |||||||| ||||||| ||||||||||||||
Sbjct 876 TCATCAATGTAGATGGGGATACCGTAATGTATCAGTTCTTGAAGAAGTGGTGGATAATTA 935
Query 1050 -CAAAAAGGCTAAGATCCCACTTGATGTGATTTGGAACGATGATGATCACATGGATGGTC 1108
| |||||||||||||||| |||||||||||||||||||||| |||| |||||||||||
Sbjct 936 TC-AAAAGGCTAAGATCCCTCTTGATGTGATTTGGAACGATGCTGATTACATGGATGGTT 994
Query 1109 ACAAAGATTTCACGTTGAATCCTGTG-GCTTATCCTCGTGCTAAGCTATTGGCGTTCTTG 1167
|||| || ||||| ||| ||| |||| ||| ||||| ||||||||||||||| ||||||
Sbjct 995 ACAAGGACTTCACATTGGATCTTGTGAACTT-TCCTCATGCTAAGCTATTGGCTTTCTTG 1053
Query 1168 GACAAAATCCACAAGATTGGAATGAAGTATATTGTGATCAATGATCCTGGTATTGGTGTC 1227
|| | |||||||||||| |||||||||||| ||||||| |||||||||||||||||||||
Sbjct 1054 GATAGAATCCACAAGATGGGAATGAAGTATGTTGTGATAAATGATCCTGGTATTGGTGTC 1113
Query 1228 AACGCTAGCTACGGTACATTT--CAGAGAGCCATGGCTGCTGATGTGTTTATTAAGTATG 1285
||||| ||||||||| ||| || |||| ||||||| ||||||||| ||||| ||||
Sbjct 1114 AACGCGAGCTACGGT--GTTTACCAAAGAGGCATGGCTAATGATGTGTTCATTAAATATG 1171
Query 1286 AAGGAAAGCCATTCTTGGCTCAAGTGTGGCCTGGTCCGGTTTACTTCCCTGATTTCCTTA 1345
|||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |
Sbjct 1172 AAGGAAAGCCTTTCTTGGCTCAAATGTGGCCTGGTCCGGTTTACTTCCCTGATTTCCTCA 1231
Query 1346 ACCCGAAGACGGTTTCTTGGTGGGGTGATGAAATCAAACGGTTCCATGATTTAGTCCCTA 1405
|||| || ||||| ||||||||||||||||||||| ||| |||||||| |||||||| |
Sbjct 1232 ACCCAAAAACGGTGTCTTGGTGGGGTGATGAAATCCGACGTTTCCATGAATTAGTCCCCA 1291
Query 1406 TTGATGGT-TTATGGATTGACATGAACGAG 1434
|||||||| || ||||| |||||||| |||
Sbjct 1292 TTGATGGTCTT-TGGATCGACATGAATGAG 1320
Score = 944 bits (511), Expect = 0.0
Identities = 723/825 (88%), Gaps = 16/825 (2%)
Strand=Plus/Plus
Query 1568 AGATTAATGCTACTGGTGTCGTAGCTCCTGTTGGGTTCAAGACTATTGCTACAAGTGC-T 1626
|||| ||||||||||| | ||||||| |||| |||||||||||| | |||||||| |
Sbjct 1319 AGATCAATGCTACTGGAAACAAAGCTCCTCTTGGATTCAAGACTATTCCCACAAGTGCTT 1378
Query 1627 ACTCATTACAATGGTGTTCGAGAGTACGATGCTCACAGTATCTACGGATTCTCTGAGACC 1686
| ||| |||||||||||||| |||||||| |||||||| |||||||| ||||||||| ||
Sbjct 1379 A-TCACTACAATGGTGTTCGTGAGTACGACGCTCACAGCATCTACGGGTTCTCTGAGGCC 1437
Query 1687 ATCGCAACTCACAAGGGCTTACTTAATGTCCAAGGCAAACGTCCCTTCATTTTATCCCGG 1746
||| | || || |||| ||||||| ||||||||||||||||||||||||| || || |||
Sbjct 1438 ATCTCGACCCATAAGGCCTTACTTGATGTCCAAGGCAAACGTCCCTTCATATTGTCACGG 1497
Query 1747 TCTACTTTCGTTGGTTCGGGTCAATATGCGGCTCACTGGACCGGAGATAACCAAGGAACA 1806
|| ||||| |||||||| ||||||||||| ||||||||||| ||||||||||| ||||||
Sbjct 1498 TCCACTTTTGTTGGTTCAGGTCAATATGCTGCTCACTGGACTGGAGATAACCAGGGAACA 1557
Query 1807 TGGCAGAGCTTGCAAGTGTCTATCTCAACTATGTTGAACTTCGGTATATTTGGAGTTCCC 1866
||||||||||||||||| ||||||||||| |||||||||||||| || |||||||||||
Sbjct 1558 TGGCAGAGCTTGCAAGTATCTATCTCAACGATGTTGAACTTCGGAATTTTTGGAGTTCCT 1617
Query 1867 ATGGTTGGTTCAGACATTTGTGGATTC-TACC-CACAACCAACAGAAGAACTCTGCAACC 1924
||||||||||||||||| ||||||||| | || | ||| || ||||||||||||||||||
Sbjct 1618 ATGGTTGGTTCAGACATATGTGGATTCTTTCCTC-CAA-CACCAGAAGAACTCTGCAACC 1675
Query 1925 GTTGGATCGAAGTAGGCGCGTTTTACCCGTTTTCAAGAGATCACGCCAATTACTACT-CA 1983
||||||| ||||| || ||||||||||| |||||||||||||| ||| ||||||| | |
Sbjct 1676 GTTGGATTGAAGTCGGTGCGTTTTACCCCTTTTCAAGAGATCATGCCGATTACTA-TGCG 1734
Query 1984 CCAAGACAAGAGCTTTACCAAT-GGGACACAGTTGCAGACTCAGCTCGTAACGCTCTTGG 2042
|||||| ||||||||||||||| |||| ||||| ||||| ||||||||||||||||||||
Sbjct 1735 CCAAGAAAAGAGCTTTACCAATGGGGA-ACAGTAGCAGAGTCAGCTCGTAACGCTCTTGG 1793
Query 2043 TATGAGATACAAGA-TCCTTCCTTTCCTCTACACTCTTAACTACGAAGCGCATATGACTG 2101
||||||||||| | |||||||||| ||||||||||| ||||||||||| |||||||| |
Sbjct 1794 GATGAGATACAA-ACTCCTTCCTTTTCTCTACACTCTCAACTACGAAGCCCATATGACCG 1852
Query 2102 GTGCACCCATCGCTAGACCGCTCTTCTTCTCATTCCCTGAATACACCGAATGTTACGGCA 2161
|||||||||||||||||||||||||||||||||||||||| |||||||| || |||||
Sbjct 1853 GTGCACCCATCGCTAGACCGCTCTTCTTCTCATTCCCTGATTACACCGAGTGCTACGGTT 1912
Query 2162 ACAGCAGACAGTTCTTGCTTGGAAGCAGCTTCATGATATCTCCGGTTCTCGAGCAAGGCA 2221
|||| |||||||||||| ||||||||||| |||||||| || ||||| || ||||| |
Sbjct 1913 TGAGCAAACAGTTCTTGCTCGGAAGCAGCTTAATGATATCACCAGTTCTTGAACAAGGTA 1972
Query 2222 AAACCGAAGTAGAAGCAT-TGTTCCCACCAGGTTCTTGGTACCACATGTTCGACATGACT 2280
||||| |||| ||||| | |||||||||||||||||||||||||||| || |||||||||
Sbjct 1973 AAACCCAAGTTGAAGC-TCTGTTCCCACCAGGTTCTTGGTACCACATTTTTGACATGACT 2031
Query 2281 CAAG-CAGTAGTGTCCAAGAACGGGAAACGTGTAACTCTCCCAGCTCCTTTGAACTTTGT 2339
|| | | || || |||||||||||||| || || |||||||||||||| |||||| ||||
Sbjct 2032 CAGGTC-GTTGTTTCCAAGAACGGGAAGCGCGTGACTCTCCCAGCTCCGTTGAACGTTGT 2090
Query 2340 GAACGTTCATCTTTACCAAAACACTATCTTACCAACGCAACAAGG 2384
|||||| ||||||||||| ||||| || ||||||| |||||||||
Sbjct 2091 GAACGTGCATCTTTACCAGAACACGATATTACCAATGCAACAAGG 2135
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 117317954600
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5