BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G68560.1 Length=3106 Score E Sequences producing significant alignments: (Bits) Value Ahg926139 jgi|Araly1|926139|scaffold_201700.1 4473 0.0 Ahg897024 jgi|Araly1|897024|Al_scaffold_0005_990 1978 0.0 Ahg484972 jgi|Araly1|484972|fgenesh2_kg.5__964__AT3G45940.1 1064 0.0 > Ahg926139 jgi|Araly1|926139|scaffold_201700.1 Length=2791 Score = 4473 bits (2422), Expect = 0.0 Identities = 2672/2794 (96%), Gaps = 11/2794 (0%) Strand=Plus/Plus Query 87 AAAGTACCACTCTATAGCCATGGcttc--c-tcttcttcatctctagctttctctctttc 143 ||||| |||||||||||||||||||| | | ||||||||||||||||||||||||||| Sbjct 2 AAAGTTTCACTCTATAGCCATGGCTTCTTCTTGTTCTTCATCTCTAGCTTTCTCTCTTTC 61 Query 144 tcttcttctagctttaatcctctgtttctcACCCACCCAATCCTACAAAACCATCGGCAA 203 |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 62 TCTTTTTCTAGCTTTAATCCTCTGTTTCTCACCCACCCAATCCTCCAAAACCATCGGCAA 121 Query 204 AGGCTACCGTTTGGTCTCCATCGAAGAATCTCCCGACGGTGGTTTCATTGGTTATCTCCA 263 ||||||||||||| ||||||||||||||||||| || ||||| ||||||||||| ||||| Sbjct 122 AGGCTACCGTTTGATCTCCATCGAAGAATCTCCAGATGGTGGCTTCATTGGTTACCTCCA 181 Query 264 AGTCAAACAAAAGAACAAAATCTACGGCTCTGATATCACCACTCTTCGTCTCTTCGTCAA 323 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 182 AGTCAAACAAAAGAACAAAATCTACGGCTCTGATATCACCACTCTTCGTCTCTTCGTCAA 241 Query 324 GCACGAAACTGATTCACGTCTTCGTGTTCACATCACTGACGCGAAACAACAACGATGGGA 383 ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 242 GCACGAAACAGATTCACGTCTTCGTGTTCACATCACAGACGCGAAACAACAACGATGGGA 301 Query 384 AGTTCCATACAATCTCCTCCCACGAGAACAACCACCACAAGTCGGAAAAGTCATCGGAAA 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 302 AGTTCCATACAATCTCCTCCCACGAGAACAACCACCACAAGTCGGAAAAGTCATCGGAAA 361 Query 444 ATCAAGAAAATCTCCAATCACAGTTCAAGAAATCTCCGGATCCGAACTTATCTTCAGTTA 503 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 362 ATCAAGAAAATCTCCAATCACAGTTCAAGAAATCTCCGGATCCGAACTAATCTTCAGTTA 421 Query 504 CACAACAGATCCATTCACTTTCGCCGTGAAACGTAGATCTAACCACGAAACACTCTTCAA 563 ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct 422 CACAACAGATCCATTCACTTTCGCCGTAAAACGTAGATCTAACCATGAAACACTCTTCAA 481 Query 564 CACAACAAGCTCATTAGTGTTCAAAGATCAATACCTAGAGATCTCAACTTCATTACCAAA 623 ||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct 482 CACCTCAAGCTCATTAGTATTCAAAGATCAATACCTAGAGATCTCAACTTCGTTACCAAA 541 Query 624 AGAAGCTTCACTCTATGGTTTAGGTGAAAACTCACAAGCTAATGGTATCAAACTCGTACC 683 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 542 AGAAGCATCACTCTATGGTTTAGGTGAAAACTCACAAGCTAATGGTATCAAACTCGTACC 601 Query 684 TAACGAGCCTTATACTCTTTACACTGAAGATGTTTCAGCTATCAATCTTAACACTGACCT 743 ||||||||||||||||||||||||||||||||||||||| || |||||||||||||| || Sbjct 602 TAACGAGCCTTATACTCTTTACACTGAAGATGTTTCAGCCATTAATCTTAACACTGATCT 661 Query 744 TTATGGTTCGCATCCGATGTATATGGATCTAAGAAACGTTGGAGGTAAAGCTTATGCTCA 803 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 662 TTATGGTTCGCATCCGATGTATATGGATCTAAGAAACGTTGGAGGTAAAGCTTATGCTCA 721 Query 804 TGCTGTTCTTCTT--TTGAATAGTAATGGTATGGATGTTTTCTATAGAGGTGATTCTTTG 861 |||||| || || || |||||||||||||||||||||||||||||||||||||| ||| Sbjct 722 TGCTGTG-TTGTTGCTT-AATAGTAATGGTATGGATGTTTTCTATAGAGGTGATTCGTTG 779 Query 862 ACGTATAAAGTTATCGGAGGTGTTTTCGATTTCTATTTCATCGCCGGACCGTCGCCGTTA 921 |||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||| Sbjct 780 ACGTATAAAGTTATCGGAGGTGTTTTTGACTTCTATTTCATCGCCGGACCTTCGCCGTTA 839 Query 922 AATGTTGTTGATCAGTATACTCAGTTAATCGGAAGACCTGCTCCTATGCCGTACTGGTCT 981 ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct 840 AATGTTGTTGATCAGTATACTCAGTTAATCGGAAGGCCTGCTCCAATGCCGTACTGGTCT 899 Query 982 TTAGGATTTCATCAATGTAGATGGGGATACCATAATCTATCAGTTGTTGAAGATGTGGTG 1041 ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| Sbjct 900 TTAGGATTTCATCAATGTAGATGGGGATATCATAATTTATCAGTTGTTGAAGATGTGGTG 959 Query 1042 GATAATTACAAAAAGGCTAAGATCCCACTTGATGTGATTTGGAACGATGATGATCACATG 1101 ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct 960 GATAATTACAAAAAGGCTAAGATTCCTCTTGATGTGATTTGGAACGATGATGATCACATG 1019 Query 1102 GATGGTCACAAAGATTTCACGTTGAATCCTGTGGCTTATCCTCGTGCTAAGCTATTGGCG 1161 |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct 1020 GATGGTCACAAAGATTTCACTTTGAATCCAGTGGCTTATCCTCGTGCTAAGCTATTGGCG 1079 Query 1162 TTCTTGGACAAAATCCACAAGATTGGAATGAAGTATATTGTGATCAATGATCCTGGTATT 1221 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1080 TTCTTGGACAAAATCCACAAGATTGGAATGAAGTATATTGTGATCAATGATCCTGGTATT 1139 Query 1222 GGTGTCAACGCTAGCTACGGTACATTTCAGAGAGCCATGGCTGCTGATGTGTTTATTAAG 1281 ||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||| Sbjct 1140 GGTGTCAACGCTAGCTACGGTACATATCAAAGAGCCATGGCCGCTGATGTGTTTATTAAG 1199 Query 1282 TATGAAGGAAAGCCATTCTTGGCTCAAGTGTGGCCTGGTCCGGTTTACTTCCCTGATTTC 1341 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1200 TATGAAGGAAAGCCTTTCTTGGCTCAAGTGTGGCCTGGTCCGGTTTACTTCCCTGATTTC 1259 Query 1342 CTTAACCCGAAGACGGTTTCTTGGTGGGGTGATGAAATCAAACGGTTCCATGATTTAGTC 1401 ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct 1260 CTTAACCCGAAGACGGTTTCTTGGTGGGGAGATGAAATCAAACGCTTCCATGATTTAGTC 1319 Query 1402 CCTATTGATGGTTTATGGATTGACATGAACGAGGTGTCGAACTTTTGTTCTGGTTTATGC 1461 |||||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||| Sbjct 1320 CCTATTGATGGTCTATGGATTGACATGAACGAGGTGTCGAACTTTTGCTCTGGTTTGTGC 1379 Query 1462 ACAATCCCTGAAGGAAAGCAGTGTCCAAGTGGGGAAGGTCCTGGTTGGGTTTGTTGCTTG 1521 |||||||| | || ||||| ||||| ||||||||||| ||||||||||||||||||||| Sbjct 1380 ACAATCCCACAGGGGAAGCAATGTCCGAGTGGGGAAGGACCTGGTTGGGTTTGTTGCTTG 1439 Query 1522 GACTGCAAGAATATAACCAAGACTAGATGGGATGATCCTCCTTACAAGATTAATGCTACT 1581 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1440 GACTGCAAGAATATTACCAAGACTAGATGGGATGATCCTCCTTACAAGATTAATGCTACT 1499 Query 1582 GGTGTCGTAGCTCCTGTTGGGTTCAAGACTATTGCTACAAGTGCTACTCATTACAATGGT 1641 || |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct 1500 GGAGTCGTAGCTCCTGTTGGGTTCAAGACTATTGCCACAAGTGCTACACATTACAATGGT 1559 Query 1642 GTTCGAGAGTACGATGCTCACAGTATCTACGGATTCTCTGAGACCATCGCAACTCACAAG 1701 ||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct 1560 GTTCGAGAGTATGATGCTCACAGTATCTACGGGTTCTCTGAGACCATCGCGACTCACAAG 1619 Query 1702 GGCTTACTTAATGTCCAAGGCAAACGTCCCTTCATTTTATCCCGGTCTACTTTCGTTGGT 1761 ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1620 GGCTTACTTGATGTCAAAGGCAAACGTCCCTTCATTTTATCCCGGTCTACTTTCGTGGGT 1679 Query 1762 TCGGGTCAATATGCGGCTCACTGGACCGGAGATAACCAAGGAACATGGCAGAGCTTGCAA 1821 |||||| ||||||| ||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 1680 TCGGGTAAATATGCCGCTCACTGGACTGGAGATAATCAAGGAACATGGCAGAGCTTGCAA 1739 Query 1822 GTGTCTATCTCAACTATGTTGAACTTCGGTATATTTGGAGTTCCCATGGTTGGTTCAGAC 1881 |||||||||||||| |||||||| || ||||| ||||||||||||||||||||||||||| Sbjct 1740 GTGTCTATCTCAACCATGTTGAATTTTGGTATCTTTGGAGTTCCCATGGTTGGTTCAGAC 1799 Query 1882 ATTTGTGGATTCTACCCACAACCAACAGAAGAACTCTGCAACCGTTGGATCGAAGTAGGC 1941 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct 1800 ATTTGTGGATTCTACCCTCAACCAACAGAAGAACTCTGCAACCGTTGGATCGAAGTTGGC 1859 Query 1942 GCGTTTTACCCGTTTTCAAGAGATCACGCCAATTACTACTCACCAAGACAAGAGCTTTAC 2001 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1860 GCGTTTTACCCGTTTTCAAGAGATCACGCCAATTACTACTCACCAAGACAAGAGCTTTAC 1919 Query 2002 CAATGGGACACAGTTGCAGACTCAGCTCGTAACGCTCTTGGTATGAGATACAAGATCCTT 2061 |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct 1920 CAATGGGACACAGTTGCAGACTCAGCTCGTAACGCTCTTGGTATGAGATATAAAATCCTT 1979 Query 2062 CCTTTCCTCTACACTCTTAACTACGAAGCGCATATGACTGGTGCACCCATCGCTAGACCG 2121 ||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||| Sbjct 1980 CCTTTCCTCTACACTCTCAACTACGAAGCCCATATGACCGGTGCACCCATCGCTAGACCG 2039 Query 2122 CTCTTCTTCTCATTCCCTGAATACACCGAATGTTACGGCAACAGCAGACAGTTCTTGCTT 2181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2040 CTCTTCTTCTCATTCCCTGAATACACCGAATGTTACGGCAACAGCAGACAGTTCTTGCTT 2099 Query 2182 GGAAGCAGCTTCATGATATCTCCGGTTCTCGAGCAAGGCAAAACCGAAGTAGAAGCATTG 2241 ||||||||||| ||||||||||| ||||| || |||||||||||||||||||||||||| Sbjct 2100 GGAAGCAGCTTAATGATATCTCCCGTTCTTGAAAAAGGCAAAACCGAAGTAGAAGCATTG 2159 Query 2242 TTCCCACCAGGTTCTTGGTACCACATGTTCGACATGACTCAAGC-AGTAGTGTCCAAGAA 2300 |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| Sbjct 2160 TTCCCACCAGGTTCTTGGTACCACATGTTCGACATGACTCAAGCCA-TAGTGTCCAAGAA 2218 Query 2301 CGGGAAACGTGTAACTCTCCCAGCTCCTTTGAACTTTGTGAACGTTCATCTTTACCAAAA 2360 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||||||||| Sbjct 2219 TGGGAAGCGCGTAACTCTCTCAGCTCCTTTGAACTTTGTGAACGTTCACCTTTACCAAAA 2278 Query 2361 CACTATCTTACCAACGCAACAAGGCGGGTTGATTTCCAAGGACGCAAGAACAACACCGTT 2420 |||||| ||||||| ||||||||||||||| |||||||| ||||| ||||| |||||||| Sbjct 2279 CACTATATTACCAATGCAACAAGGCGGGTTAATTTCCAAAGACGCGAGAACCACACCGTT 2338 Query 2421 TAGCCTCGTCATTGCTTTCCCTGCAGGAGCTTCTGAAGGTTACGCCACCGGGAAACTCTA 2480 ||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 2339 TAGCCTCGTCATTACTTTCCCTGCTGGAGCTTCTGAGGGTTACGCCACCGGGAAACTCTA 2398 Query 2481 TCTAGACGAAGACGAGCTTCCGGAAATGAAGCTAGGAAATGGACAGTCCACGTACGTTGA 2540 |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct 2399 TCTAGACGAAGACGAGCTCCCCGAAATGAAGCTAGGAAATGGACAGTCCACGTACGTTGA 2458 Query 2541 CTTCTACGCTTCGGTCGGAAACGGGACAATGAAGATGTGGTCACAAGTTAAAGAAGGTAA 2600 ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| Sbjct 2459 CTTCTACGCTTCGGTTGGAAACGGGACTGTGAAGATGTGGTCACAAGTTAAAGAAGGTAA 2518 Query 2601 GTTTGCATTGAGCAAAGGATGGGTGATTGAGAAAGTGAGTGTTTTGGGACTTAGAGGAGC 2660 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | Sbjct 2519 GTTTGCATTGAGCAAAGGATGGGTGATTGAGAAAGTGAGTGTTTTGGGACTTAAAGGAAC 2578 Query 2661 AGGACAAG-TGTCTGAGATTCAAATCAATGGAAGTCCAATGACAAAGAAGATTGAGGTTA 2719 |||||||| | |||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct 2579 AGGACAAGCT-TCTGAGATTCAAATCAATGGCAGTCCAATGACAAAGAAGATTGAGGTAA 2637 Query 2720 GCTCGAAGGAGCATACCTATGTGATTGGTTTGGAAGATGAAGAAGAGAACAAGAGTGTGA 2779 |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 2638 GCTCGAAGGAACATACATATGTGATTGGTTTGGAAGATGAAGAAGAGAACAAGAGTGTGA 2697 Query 2780 TGGTTGAGGTTAGAGGACTTGAGATGCTTGTTGGAAAGGATTTTAACATGTCCTGGAAAA 2839 |||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||| Sbjct 2698 TGGTTGAGGTTAGAGGTCTTGAGATGCTTGTTGGTAAGGACTTTAACATGTCCTGGAAAA 2757 Query 2840 TGGGTATCAATTAATTTACATGTGAGAGTTGGTA 2873 |||||||||||||||||||||||||||||||||| Sbjct 2758 TGGGTATCAATTAATTTACATGTGAGAGTTGGTA 2791 > Ahg897024 jgi|Araly1|897024|Al_scaffold_0005_990 Length=2241 Score = 1978 bits (1071), Expect = 0.0 Identities = 1695/1993 (85%), Gaps = 55/1993 (3%) Strand=Plus/Plus Query 589 GATCAATACCTAGAGATCTCAACTTCATTACCAAAAGAAGCTTCACTCTATGG-TTTAGG 647 ||||| ||||| ||||||||||||||| |||| ||||| | || || ||||| ||| || Sbjct 1 GATCAGTACCTTGAGATCTCAACTTCACTACCCAAAGACTCGTCTCTGTATGGATTT-GG 59 Query 648 TGAAAACTCACAAGCTAATGGTATCAAACTCGTACCTAACGAGCCTTATACTCTTTACAC 707 ||||||||||||| | ||||| ||||| || || ||||| |||||||| ||||||| ||| Sbjct 60 TGAAAACTCACAACCCAATGGAATCAAGCTTGTTCCTAATGAGCCTTACACTCTTTTCAC 119 Query 708 TGAAGATGTTTCAGC-TATCAATCTTAACACTGACCTTTATGGTTCGCATCC-GATGTAT 765 |||||| || || || | | || || ||||| || ||||| || || || || | | || Sbjct 120 TGAAGACGTCTCGGCGT-TTAAACTCAACACCGATCTTTACGGGTCACACCCTG-TTTAC 177 Query 766 ATGGATCTAAGAAACGTTGGAGGTAAAGCTTATGCTCA-TGCTGTTCTTCTTTTGAATAG 824 |||||| | ||||||||| |||||||| | || || || | ||||||| ||| | || || Sbjct 178 ATGGATTTGAGAAACGTTAGAGGTAAATCCTACGCACACT-CTGTTCTGCTTCTCAACAG 236 Query 825 TAATGGTATGGATGT-TTTCTATAGAGGTGATTCTTTGACGTATAAAGTTATCGGAGGTG 883 ||||||||||||||| || || ||||| | ||| |||||||| || || || ||||||| Sbjct 237 TAATGGTATGGATGTGCTT-TACAGAGGCGGTTCCTTGACGTACAAGGTAATTGGAGGTG 295 Query 884 TTTTCGATTTCTATTTCATCGCCGGACCGTCGCCGT-TAAATGTTGTTGATCAGTATAC- 941 ||||||||||||||||| | || ||||||||||| | | ||||| |||||||| || || Sbjct 296 TTTTCGATTTCTATTTCTTTGCTGGACCGTCGCC-TCTCAATGTCGTTGATCAATACACT 354 Query 942 TCAGTTAATCGGAAGACCTGCTCCTATGCCGTACTGGTCTTTAGGATTTCATCAATGTAG 1001 || |||||||||||| || || || ||||||||||||||| | ||||||||||||||| Sbjct 355 TC-GTTAATCGGAAGGCCAGCACCAATGCCGTACTGGTCTCT---ATTTCATCAATGTAG 410 Query 1002 ATGGGGATACCATAATCTATCAGTTGTTGAAGATGTGGTGGATAATTA-CAAAAAGGCTA 1060 ||||||||||| |||| |||||||| ||||||| |||||||||||||| | ||||||||| Sbjct 411 ATGGGGATACCGTAATGTATCAGTTCTTGAAGAAGTGGTGGATAATTATC-AAAAGGCTA 469 Query 1061 AGATCCCACTTGATGTGATTTGGAACGATGATGATCACATGGATGGTCACAAAGATTTCA 1120 ||||||| |||||||||||||||||||||| |||| ||||||||||| |||| || |||| Sbjct 470 AGATCCCTCTTGATGTGATTTGGAACGATGCTGATTACATGGATGGTTACAAGGACTTCA 529 Query 1121 CGTTGAATCCTGTG-GCTTATCCTCGTGCTAAGCTATTGGCGTTCTTGGACAAAATCCAC 1179 | ||| ||| |||| ||| ||||| ||||||||||||||| |||||||| | ||||||| Sbjct 530 CATTGGATCTTGTGAACTT-TCCTCATGCTAAGCTATTGGCTTTCTTGGATAGAATCCAC 588 Query 1180 AAGATTGGAATGAAGTATATTGTGATCAATGATCCTGGTATTGGTGTCAACGCTAGCTAC 1239 ||||| |||||||||||| ||||||| |||||||||||||||||||||||||| |||||| Sbjct 589 AAGATGGGAATGAAGTATGTTGTGATAAATGATCCTGGTATTGGTGTCAACGCGAGCTAC 648 Query 1240 GGTACATTT--CAGAGAGCCATGGCTGCTGATGTGTTTATTAAGTATGAAGGAAAGCCAT 1297 ||| ||| || |||| ||||||| ||||||||| ||||| |||||||||||||| | Sbjct 649 GGT--GTTTACCAAAGAGGCATGGCTAATGATGTGTTCATTAAATATGAAGGAAAGCCTT 706 Query 1298 TCTTGGCTCAAGTGTGGCCTGGTCCGGTTTACTTCCCTGATTTCCTTAACCCGAAGACGG 1357 ||||||||||| |||||||||||||||||||||||||||||||||| ||||| || |||| Sbjct 707 TCTTGGCTCAAATGTGGCCTGGTCCGGTTTACTTCCCTGATTTCCTCAACCCAAAAACGG 766 Query 1358 TTTCTTGGTGGGGTGATGAAATCAAACGGTTCCATGATTTAGTCCCTATTGATGGT-TTA 1416 | ||||||||||||||||||||| ||| |||||||| |||||||| ||||||||| || Sbjct 767 TGTCTTGGTGGGGTGATGAAATCCGACGTTTCCATGAATTAGTCCCCATTGATGGTCTT- 825 Query 1417 TGGATTGACATGAACGAGGTGTCGAACTTT-TGTTCTGGTTTATGCACAATCCCTGAAGG 1475 ||||| |||||||| ||||| || || ||| || ||||| || ||||||||||| || || Sbjct 826 TGGATCGACATGAATGAGGTCTCCAA-TTTCTGCTCTGGATTGTGCACAATCCCGGAGGG 884 Query 1476 -AAAGCAGTGTCCAAGTGGGGAAGGTCCTGGT-TGG-GTTTGTTGCTTGGACTGCAAGAA 1532 ||| |||||||| ||||||| || |||||| || || ||||||||||||||||||| Sbjct 885 GAAA-CAGTGTCCGAGTGGGGGAGAACCTGGTGTGACGT--GTTGCTTGGACTGCAAGAA 941 Query 1533 TATAACCAAGACTAGATGGGATGATCCTCCTTACAAGATTAATGCTACTGGTGTCGTAGC 1592 ||||||||| || |||||||||||||| ||||||||||| ||||||||||| | ||| Sbjct 942 TATAACCAATACGAGATGGGATGATCCACCTTACAAGATCAATGCTACTGGAAACAAAGC 1001 Query 1593 TCCTGTTGGGTTCAAGACTATTGCTACAAGTGCT-ACTCATTACAATGGTGTTCGAGAGT 1651 |||| |||| |||||||||||| | ||||||||| | ||| |||||||||||||| |||| Sbjct 1002 TCCTCTTGGATTCAAGACTATTCCCACAAGTGCTTA-TCACTACAATGGTGTTCGTGAGT 1060 Query 1652 ACGATGCTCACAGTATCTACGGATTCTCTGAGACCATCGCAACTCAC-AAGGGCTTACTT 1710 |||| |||||||| |||||||| ||||||||| ||||| | || || |||| ||||||| Sbjct 1061 ACGACGCTCACAGCATCTACGGGTTCTCTGAGGCCATCTCGAC-CAATAAGGCCTTACTT 1119 Query 1711 AATGTCCAAGGCAAACGTCCCTTCATTTTATCCCGGTCTACTTTCGTTGGTTCGGGTCAA 1770 ||||||||||||||||||||||||| || || ||||| ||||| |||||||| |||||| Sbjct 1120 GATGTCCAAGGCAAACGTCCCTTCATATTGTCACGGTCCACTTTTGTTGGTTCAGGTCAA 1179 Query 1771 TATGCGGCTCACTGGACCGGAGATAACCAAGGAACATGGCAGAGCTTGCAAGTGTCTATC 1830 ||||| ||||||||||| ||||||||||| ||||||||||||||||||||||| |||||| Sbjct 1180 TATGCTGCTCACTGGACTGGAGATAACCAGGGAACATGGCAGAGCTTGCAAGTATCTATC 1239 Query 1831 TCAACTATGTTGAACTTCGGTATATTTGGAGTTCCCATGGTTGGTTCAGACATTTGTGGA 1890 ||||| |||||||||||||| || ||||||||||| ||||||||||||||||| |||||| Sbjct 1240 TCAACGATGTTGAACTTCGGAATTTTTGGAGTTCCTATGGTTGGTTCAGACATATGTGGA 1299 Query 1891 TTCTACCCAC-AACCAACAGAAGAACTCTGCAACCGTTGGATCGAAGTAGGCGCGTTTTA 1949 |||| || | ||| | ||||||||||||||||||||||||| ||||| || |||||||| Sbjct 1300 TTCTTTCCTCCAAC-ACCAGAAGAACTCTGCAACCGTTGGATTGAAGTCGGTGCGTTTTA 1358 Query 1950 CCCGTTTTCAAGAGATCACGCCAATTACTACT-CACCAAGACAAGAGCTTTACCAATGGG 2008 ||| |||||||||||||| ||| ||||||| | | |||||| |||||||||||||||||| Sbjct 1359 CCCCTTTTCAAGAGATCATGCCGATTACTA-TGCGCCAAGAAAAGAGCTTTACCAATGGG 1417 Query 2009 -ACACAGTTGCAGACTCAGCTCGTAACGCTCTTGGTATGAGATACAAGA-TCCTTCCTTT 2066 | ||||| ||||| |||||||||||||||||||| ||||||||||| | |||||||||| Sbjct 1418 GA-ACAGTAGCAGAGTCAGCTCGTAACGCTCTTGGGATGAGATACAA-ACTCCTTCCTTT 1475 Query 2067 CCTCTACACTCTTAACTACGAAGCGCATATGACTGGTGCACCCATCGCTAGACCGCTCTT 2126 ||||||||||| ||||||||||| |||||||| |||||||| || |||||||||||||| Sbjct 1476 TCTCTACACTCTCAACTACGAAGCCCATATGACGGGTGCACCAATTGCTAGACCGCTCTT 1535 Query 2127 CTTCTCATTCCCTGAATACACCGAATGTTACGGCAACAGCAGACAGTTCTTGCTTGGAAG 2186 |||||| |||||||| |||||||| || ||||| |||| |||||||||||| ||||| Sbjct 1536 CTTCTCTTTCCCTGATTACACCGAGTGCTACGGTTTGAGCAAACAGTTCTTGCTCGGAAG 1595 Query 2187 CAGCTTCATGATATCTCCGGTTCTCGAGCAAGGCAAAACCGAAGTAGAAGCAT-TGTTCC 2245 |||||| |||||||| || ||||| || ||||| |||||| |||| ||||| | |||||| Sbjct 1596 CAGCTTAATGATATCACCAGTTCTTGAACAAGGTAAAACCCAAGTTGAAGC-TCTGTTCC 1654 Query 2246 CACCAGGTTCTTGGTACCACATGTTCGACATGACTCAAG-CAGTAGTGT-CCAAGAACGG 2303 || ||||||||||||||||||| || ||||||||||| | | || | | |||||||||| Sbjct 1655 CATCAGGTTCTTGGTACCACATTTTTGACATGACTCAGGTC-GTT-TATTCCAAGAACGG 1712 Query 2304 GAAACGTGTAACTCTCCCAGCTCCTTTGAACTTTGTGAACGTTCATCTTTACCAAAACAC 2363 ||| || || ||||||| |||||| |||||| |||||||||| ||||||||||| ||||| Sbjct 1713 GAAGCGCGTGACTCTCCTAGCTCCGTTGAACGTTGTGAACGTGCATCTTTACCAGAACAC 1772 Query 2364 TATCTTACCAACGCAACAAGGCGGGTTGATTTCCAAGGACGCAAGAACAACACCGTTTAG 2423 || ||||| | ||||||||| ||||| | |||||| || || |||||||| |||||||| Sbjct 1773 GATATTACCGATGCAACAAGGTGGGTTAAATTCCAAAGAGGCGAGAACAACTCCGTTTAG 1832 Query 2424 CCTCGTCATTGCTTTCCCTGC-AGGAGCTTCTGAAGGTTACGCCACCGGGAAACTCTATC 2482 || ||| | ||||||| || || ||| || || || ||||||||||||||||||| || Sbjct 1833 TCTGGTCGTCACTTTCCCGGCTAG-AGCATCAGAGGGATACGCCACCGGGAAACTCTTTC 1891 Query 2483 TAGACGAAGACGAGCTTCCGGAAATGAAGCTAGGAAATGGACAGTCCACGTACGTTGACT 2542 | ||||| || |||||||| || ||||| || ||||| |||||||| || |||||||||| Sbjct 1892 TTGACGATGATGAGCTTCCAGAGATGAAACTTGGAAACGGACAGTCAACATACGTTGACT 1951 Query 2543 TCTACGCTTCGGT 2555 ||||||| ||||| Sbjct 1952 TCTACGCATCGGT 1964 > Ahg484972 jgi|Araly1|484972|fgenesh2_kg.5__964__AT3G45940.1 Length=2508 Score = 1064 bits (576), Expect = 0.0 Identities = 1106/1350 (82%), Gaps = 83/1350 (6%) Strand=Plus/Plus Query 133 ttc-tctctttctcttcttctagct-ttaatcctctgtttctcACCCAC-CCAATCCTAC 189 ||| ||||||||||||||| | ||| || |||||||| |||||| | | || | | | Sbjct 6 TTCTTCTCTTTCTCTTCTTGTGGCTATT-ATCCTCTGCTTCTCA-TCTCTCCGGTGTTCC 63 Query 190 AAAACCATCGGCAAAGGCTACCGTTTGGTCTCCATCGAAGAA-TCTCCC---GACGGTGG 245 || |||||||||||||||||||| | ||||||| | |||| |||||| || ||||| Sbjct 64 AACGCCATCGGCAAAGGCTACCGTCTAATCTCCATTG-AGAAGTCTCCCGATGATGGTGG 122 Query 246 TTTCATTGG-TTATCTCCAAGTCAAACAAAAG-AACAAAATCTACGGCTCTGATATCACC 303 |||||||| || ||||||||| || | | || ||||||||||| ||||||||||| ||| Sbjct 123 CTTCATTGGCTT-TCTCCAAGTGAAGC-AGAGTAACAAAATCTATGGCTCTGATATAACC 180 Query 304 ACT-CTTCGTCTCTTCGTCAAGCACGAAACTGATTCA-CGTCTTCGTGTTCACATCACTG 361 | | ||||| |||||| ||||||||||||| || ||| || |||||||||||||| || | Sbjct 181 A-TCCTTCGACTCTTCATCAAGCACGAAACGGA-TCATCGCCTTCGTGTTCACATAACAG 238 Query 362 ACGCGAAACA-ACAACGATGGGAAGTTCCATACAATCTCCTCC-CACGAGAACAACCACC 419 |||| ||| | |||||||||||||||||| ||||||||||||| | ||||||| | ||| Sbjct 239 ACGC-AAAGAGACAACGATGGGAAGTTCCGTACAATCTCCTCCGC-CGAGAAC-A--ACC 293 Query 420 ACAAGTCGGAAAAGTCATCGGAAAATCAAGAAAATCTCCAATCACAGTTCAAGAAATCTC 479 || | | | ||| ||||||||||||||||||||||| | || || || ||||| || Sbjct 294 AC----C-G-AGAGTAATCGGAAAATCAAGAAAATCTCCGGTTACGGTACAGGAAATATC 347 Query 480 CGGATCCGAACTT-ATCTTCAG-TTACACAACAGATCCATTCA-CTTTCGCCGTGA-AAC 535 |||| ||| | || || || || || ||| |||||||| |||| | |||||||||| || Sbjct 348 CGGA-CCGGAGTTGATATTGAGCTT-CACCACAGATCCTTTCAGC-TTCGCCGTGAGAA- 403 Query 536 GTAGATCTAACCACGAAAC-ACTCTTCAACAC-A--A---C--A--AG--C-TC----A- 576 | ||||| |||| ||| || | | |||||||| | | | | || | || | Sbjct 404 GAAGATCCAACCGCGAGACGA-TTTTCAACACTAGTAGCTCTGATGAGAACTTCGGAGAG 462 Query 577 TTAGTGTTCAAAGATCAATACCTAGAGATCTCAACTTCATTACCAAAAGAAGCTTCACTC 636 | |||||||| ||||| ||||| ||||||||||||||| |||| ||||| | || || Sbjct 463 ATGGTGTTCAAGGATCAGTACCTTGAGATCTCAACTTCACTACCCAAAGACTCGTCTCTG 522 Query 637 TATGG-TTTAGGTGAAAACTCACAAGCTAATGGTATCAAACTCGTACCTAACGAGCCTTA 695 ||||| ||| ||||||||||||||| | ||||| ||||| || || ||||| |||||||| Sbjct 523 TATGGATTT-GGTGAAAACTCACAACCCAATGGAATCAAGCTTGTTCCTAATGAGCCTTA 581 Query 696 TACTCTTTACACTGAAGATGTTTCAGC-TATCAATCTTAACACTGACCTTTATGGTTCGC 754 ||||||| ||||||||| || || || | | || || ||||| || ||||| || || | Sbjct 582 CACTCTTTTCACTGAAGACGTCTCGGCGT-TTAAACTCAACACCGATCTTTACGGGTCAC 640 Query 755 ATCC-GATGTATATGGATCTAAGAAACGTTGGAGGTAAAGCTTATGCTCA-TGCTGTTCT 812 | || | | || |||||| | ||||||||| |||||||| | || || || | ||||||| Sbjct 641 ACCCTG-TTTACATGGATTTGAGAAACGTTAGAGGTAAATCCTACGCACACT-CTGTTCT 698 Query 813 TCTTTTGAATAGTAATGGTATGGATGT-TTTCTATAGAGGTGATTCTTTGACGTATAAAG 871 ||| | || ||||||||||||||||| || || ||||| | ||| |||||||| || | Sbjct 699 GCTTCTCAACAGTAATGGTATGGATGTGCTT-TACAGAGGCGGTTCCTTGACGTACAAGG 757 Query 872 TTATCGGAGGTGTTTTCGATTTCTATTTCATCGCCGGACCGTCGCCGT-TAAATGTTGTT 930 | || |||||||||||||||||||||||| | || ||||||||||| | | ||||| ||| Sbjct 758 TAATTGGAGGTGTTTTCGATTTCTATTTCTTTGCTGGACCGTCGCC-TCTCAATGTCGTT 816 Query 931 GATCAGTATAC-TCAGTTAATCGGAAGACCTGCTCCTATGCCGTACTGGTCTTTAGGATT 989 ||||| || || || |||||||||||| || || || ||||||||||||||| |||| || Sbjct 817 GATCAATACACTTC-GTTAATCGGAAGGCCAGCACCAATGCCGTACTGGTCTCTAGGGTT 875 Query 990 TCATCAATGTAGATGGGGATACCATAATCTATCAGTTGTTGAAGATGTGGTGGATAATTA 1049 ||||||||||||||||||||||| |||| |||||||| ||||||| |||||||||||||| Sbjct 876 TCATCAATGTAGATGGGGATACCGTAATGTATCAGTTCTTGAAGAAGTGGTGGATAATTA 935 Query 1050 -CAAAAAGGCTAAGATCCCACTTGATGTGATTTGGAACGATGATGATCACATGGATGGTC 1108 | |||||||||||||||| |||||||||||||||||||||| |||| ||||||||||| Sbjct 936 TC-AAAAGGCTAAGATCCCTCTTGATGTGATTTGGAACGATGCTGATTACATGGATGGTT 994 Query 1109 ACAAAGATTTCACGTTGAATCCTGTG-GCTTATCCTCGTGCTAAGCTATTGGCGTTCTTG 1167 |||| || ||||| ||| ||| |||| ||| ||||| ||||||||||||||| |||||| Sbjct 995 ACAAGGACTTCACATTGGATCTTGTGAACTT-TCCTCATGCTAAGCTATTGGCTTTCTTG 1053 Query 1168 GACAAAATCCACAAGATTGGAATGAAGTATATTGTGATCAATGATCCTGGTATTGGTGTC 1227 || | |||||||||||| |||||||||||| ||||||| ||||||||||||||||||||| Sbjct 1054 GATAGAATCCACAAGATGGGAATGAAGTATGTTGTGATAAATGATCCTGGTATTGGTGTC 1113 Query 1228 AACGCTAGCTACGGTACATTT--CAGAGAGCCATGGCTGCTGATGTGTTTATTAAGTATG 1285 ||||| ||||||||| ||| || |||| ||||||| ||||||||| ||||| |||| Sbjct 1114 AACGCGAGCTACGGT--GTTTACCAAAGAGGCATGGCTAATGATGTGTTCATTAAATATG 1171 Query 1286 AAGGAAAGCCATTCTTGGCTCAAGTGTGGCCTGGTCCGGTTTACTTCCCTGATTTCCTTA 1345 |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct 1172 AAGGAAAGCCTTTCTTGGCTCAAATGTGGCCTGGTCCGGTTTACTTCCCTGATTTCCTCA 1231 Query 1346 ACCCGAAGACGGTTTCTTGGTGGGGTGATGAAATCAAACGGTTCCATGATTTAGTCCCTA 1405 |||| || ||||| ||||||||||||||||||||| ||| |||||||| |||||||| | Sbjct 1232 ACCCAAAAACGGTGTCTTGGTGGGGTGATGAAATCCGACGTTTCCATGAATTAGTCCCCA 1291 Query 1406 TTGATGGT-TTATGGATTGACATGAACGAG 1434 |||||||| || ||||| |||||||| ||| Sbjct 1292 TTGATGGTCTT-TGGATCGACATGAATGAG 1320 Score = 944 bits (511), Expect = 0.0 Identities = 723/825 (88%), Gaps = 16/825 (2%) Strand=Plus/Plus Query 1568 AGATTAATGCTACTGGTGTCGTAGCTCCTGTTGGGTTCAAGACTATTGCTACAAGTGC-T 1626 |||| ||||||||||| | ||||||| |||| |||||||||||| | |||||||| | Sbjct 1319 AGATCAATGCTACTGGAAACAAAGCTCCTCTTGGATTCAAGACTATTCCCACAAGTGCTT 1378 Query 1627 ACTCATTACAATGGTGTTCGAGAGTACGATGCTCACAGTATCTACGGATTCTCTGAGACC 1686 | ||| |||||||||||||| |||||||| |||||||| |||||||| ||||||||| || Sbjct 1379 A-TCACTACAATGGTGTTCGTGAGTACGACGCTCACAGCATCTACGGGTTCTCTGAGGCC 1437 Query 1687 ATCGCAACTCACAAGGGCTTACTTAATGTCCAAGGCAAACGTCCCTTCATTTTATCCCGG 1746 ||| | || || |||| ||||||| ||||||||||||||||||||||||| || || ||| Sbjct 1438 ATCTCGACCCATAAGGCCTTACTTGATGTCCAAGGCAAACGTCCCTTCATATTGTCACGG 1497 Query 1747 TCTACTTTCGTTGGTTCGGGTCAATATGCGGCTCACTGGACCGGAGATAACCAAGGAACA 1806 || ||||| |||||||| ||||||||||| ||||||||||| ||||||||||| |||||| Sbjct 1498 TCCACTTTTGTTGGTTCAGGTCAATATGCTGCTCACTGGACTGGAGATAACCAGGGAACA 1557 Query 1807 TGGCAGAGCTTGCAAGTGTCTATCTCAACTATGTTGAACTTCGGTATATTTGGAGTTCCC 1866 ||||||||||||||||| ||||||||||| |||||||||||||| || ||||||||||| Sbjct 1558 TGGCAGAGCTTGCAAGTATCTATCTCAACGATGTTGAACTTCGGAATTTTTGGAGTTCCT 1617 Query 1867 ATGGTTGGTTCAGACATTTGTGGATTC-TACC-CACAACCAACAGAAGAACTCTGCAACC 1924 ||||||||||||||||| ||||||||| | || | ||| || |||||||||||||||||| Sbjct 1618 ATGGTTGGTTCAGACATATGTGGATTCTTTCCTC-CAA-CACCAGAAGAACTCTGCAACC 1675 Query 1925 GTTGGATCGAAGTAGGCGCGTTTTACCCGTTTTCAAGAGATCACGCCAATTACTACT-CA 1983 ||||||| ||||| || ||||||||||| |||||||||||||| ||| ||||||| | | Sbjct 1676 GTTGGATTGAAGTCGGTGCGTTTTACCCCTTTTCAAGAGATCATGCCGATTACTA-TGCG 1734 Query 1984 CCAAGACAAGAGCTTTACCAAT-GGGACACAGTTGCAGACTCAGCTCGTAACGCTCTTGG 2042 |||||| ||||||||||||||| |||| ||||| ||||| |||||||||||||||||||| Sbjct 1735 CCAAGAAAAGAGCTTTACCAATGGGGA-ACAGTAGCAGAGTCAGCTCGTAACGCTCTTGG 1793 Query 2043 TATGAGATACAAGA-TCCTTCCTTTCCTCTACACTCTTAACTACGAAGCGCATATGACTG 2101 ||||||||||| | |||||||||| ||||||||||| ||||||||||| |||||||| | Sbjct 1794 GATGAGATACAA-ACTCCTTCCTTTTCTCTACACTCTCAACTACGAAGCCCATATGACCG 1852 Query 2102 GTGCACCCATCGCTAGACCGCTCTTCTTCTCATTCCCTGAATACACCGAATGTTACGGCA 2161 |||||||||||||||||||||||||||||||||||||||| |||||||| || ||||| Sbjct 1853 GTGCACCCATCGCTAGACCGCTCTTCTTCTCATTCCCTGATTACACCGAGTGCTACGGTT 1912 Query 2162 ACAGCAGACAGTTCTTGCTTGGAAGCAGCTTCATGATATCTCCGGTTCTCGAGCAAGGCA 2221 |||| |||||||||||| ||||||||||| |||||||| || ||||| || ||||| | Sbjct 1913 TGAGCAAACAGTTCTTGCTCGGAAGCAGCTTAATGATATCACCAGTTCTTGAACAAGGTA 1972 Query 2222 AAACCGAAGTAGAAGCAT-TGTTCCCACCAGGTTCTTGGTACCACATGTTCGACATGACT 2280 ||||| |||| ||||| | |||||||||||||||||||||||||||| || ||||||||| Sbjct 1973 AAACCCAAGTTGAAGC-TCTGTTCCCACCAGGTTCTTGGTACCACATTTTTGACATGACT 2031 Query 2281 CAAG-CAGTAGTGTCCAAGAACGGGAAACGTGTAACTCTCCCAGCTCCTTTGAACTTTGT 2339 || | | || || |||||||||||||| || || |||||||||||||| |||||| |||| Sbjct 2032 CAGGTC-GTTGTTTCCAAGAACGGGAAGCGCGTGACTCTCCCAGCTCCGTTGAACGTTGT 2090 Query 2340 GAACGTTCATCTTTACCAAAACACTATCTTACCAACGCAACAAGG 2384 |||||| ||||||||||| ||||| || ||||||| ||||||||| Sbjct 2091 GAACGTGCATCTTTACCAGAACACGATATTACCAATGCAACAAGG 2135 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 117317954600 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5