BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G69290.1
Length=1977
Score E
Sequences producing significant alignments: (Bits) Value
Ahg339164 jgi|Araly1|339164|fgenesh1_pg.C_scaffold_2001263 2966 0.0
Ahg476027 jgi|Araly1|476027|fgenesh2_kg.2__1157__AT1G68980.1 1764 0.0
> Ahg339164 jgi|Araly1|339164|fgenesh1_pg.C_scaffold_2001263
Length=3129
Score = 2966 bits (1606), Expect = 0.0
Identities = 1851/1970 (94%), Gaps = 14/1970 (1%)
Strand=Plus/Plus
Query 1 ATGTTCAGAAAAACTCTAAAT-TCAATCTCAAGAAGACActtctcttcgtcttctcctga 59
||||||||||||||||||| | | ||||||| ||||||| ||||||||||||||||||||
Sbjct 1 ATGTTCAGAAAAACTCTAACTAT-AATCTCACGAAGACATTTCTCTTCGTCTTCTCCTGA 59
Query 60 aagtccttctctttactcattccttaaaccctctctcttctctcACAAGCCAATCACTCT 119
||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 60 AAGTCCTTCCCTTTACTCATTCCTTAAACCCTCTCTCTTCTCTAACAAGCCAATCACTCT 119
Query 120 CTCACCATCACTATCGCCGCCTCAAAACCCCAAAACCCTAACTCC-AGATCAAAAATCCT 178
| |||| |||||||| |||||||||||||||||||||||||| || ||| ||||||||||
Sbjct 120 CACACCTTCACTATCACCGCCTCAAAACCCCAAAACCCTAAC-CCAAGAGCAAAAATCCT 178
Query 179 CCTTTGAATCTACCCTCCACGATTCCTTAAATGCCCATTACACCGATGAAGCATGGAAGG 238
||||||||||||||||||||||||| |||| | |||| |||||||||||||||||||||
Sbjct 179 CCTTTGAATCTACCCTCCACGATTCTTTAACTACCCACAACACCGATGAAGCATGGAAGG 238
Query 239 CTTTTCGGTCTCTCACCGCCGCTTCTTCTCTACCGGAGAAGCGTCTCATCAATTCCCTTA 298
||||||| |||||||||||||| |||||||| ||||||||||||||||||||||| ||||
Sbjct 239 CTTTTCGATCTCTCACCGCCGCCTCTTCTCTCCCGGAGAAGCGTCTCATCAATTCTCTTA 298
Query 299 TTACCCATTTGTCCGGTGTCGAAGGAAGCGGTGAGAGTATA-T-CTCATAGACTTAAACG 356
|||||||||||||| | ||||| ||||||||| | | | | | || ||||| || ||
Sbjct 299 TTACCCATTTGTCCAATACCGAAGAAAGCGGTGA-A-AACACTGCACACAGACTCAAGCG 356
Query 357 AGCTTTTGCTTCTGCTGCTTATGTAATTGAGAAAGATCCGATTTTGCTTGAGTTTGAGAC 416
|||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 357 AGCTTTTGCTTCCGCTGCTTATGTAATAGAGAAAGATCCGATTTTGCTTGAGTTTGAGAC 416
Query 417 TGTTCGTACGCTTTTGGAGTCGATGAAACTTGCGAAAGCTGCAGGGCCTGCTTTGGCTTT 476
||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 417 TGTTCGTACGCTTATGGAGTCGATGAAACTTGCGAAAGCTGCAGGGCCAGCGTTGGCTTT 476
Query 477 AGTGAAGTGTATGTTTAAAAACAGGTACTTTGTTCCTTTTGATCTCTGGGGGCATTTGGT 536
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 477 AGTGAAGTGTATGTTTAAAAACAGGTACTTTGTTCCTTTTGATCTCTGGGGGCATTTGAT 536
Query 537 TATTGATATCTGTCGTGAAAATGGAAGCTTGGCTCCGTTTCTTAAGGTGTTTAAGGAAAG 596
||| ||||||||| | |||||||||||||||||| |||||||||||||||||||||||||
Sbjct 537 TATCGATATCTGTAGAGAAAATGGAAGCTTGGCTGCGTTTCTTAAGGTGTTTAAGGAAAG 596
Query 597 TTGTAGAATTTCTGTAGATGAGAAGCTTGAGTTTATGAAACCCGATTTGGTAGCTAGTAA 656
|||||||||| | ||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct 597 TTGTAGAATTGCAGTAGATGAGAAGCTTGATTTTATGAAACCGGATTTGGTAGCTAGTAA 656
Query 657 TGCGGCTCTTGAAGCGTGTTGTCGACAGATGGAATCTTTGGCTGATGCTGAAAATGTGAT 716
|||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||
Sbjct 657 TGCGGCTCTTGAAGCGTGTTGTCGGCAGTTGGAATCTTTGGCTGATGCTGAAAATGTGAT 716
Query 717 TGAATCTATGGCTGTTTTAGGTGTGAAGCCTGATGAATTGAGCTTTGGGTTTCTTGCTTA 776
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 717 TGAATCTATGGCTGTTTTGGGTGTGAAGCCTGATGAATTGAGCTTTGGGTTTCTTGCTTA 776
Query 777 TTTGTATGCGAGGAAGGGGCTTCGAGAGAAGATTAGTGAGCTTGAGAATTTGATGGATGG 836
|||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 777 TTTGTATGCGAGTAAGGGGCTTCGAGAGAAGATAAGTGAGCTTGAGAATTTGATGGATGG 836
Query 837 TTTTGGTTTTGCAAGTAGAAGAATCCTTTATTCTAATATGATCAGTGGATATGTTAAGAG 896
|||||| ||||||||||||||||| |||||||| |||||||| ||||| |||||||| ||
Sbjct 837 TTTTGGGTTTGCAAGTAGAAGAATACTTTATTCCAATATGATTAGTGGGTATGTTAAAAG 896
Query 897 TGGTGATTTAGATAGTGTTTCTGATGTTATATTGCATAGTCTTAAAGAAGGT-GGAGAGG 955
| ||||||||||||||||||||||||||||| |||||||||||||||||| | ||| | |
Sbjct 897 TAGTGATTTAGATAGTGTTTCTGATGTTATACTGCATAGTCTTAAAGAAGATGGGA-AAG 955
Query 956 AATCGAGTTTCAGTGTGGAAACGTATTGTGAATTGGTTAAAGGGTTTATAGAGAGTAAAA 1015
||||| ||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 956 AATCGGGTTTCGGTGAGGAAACGTACTGTGAATTGGTTAAAGGGTTTATAGAGAGTAAAA 1015
Query 1016 GCGTTAAGAGTTTAGCGAAAGTGATACTCGAAGCTCAGAAGTTGGAATCTTCTTACGTTG 1075
|||||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||
Sbjct 1016 GCGTTAAGAGTTTAGCGAAAGTGATAATCGAAGCTCAGAAGTTGGAATCTTCTTCCATTG 1075
Query 1076 GTGTTGACAGTTCAGTTGGGTTTGGAATCATAAATGCTTGTGTAAATCTTGGTTTCTCGG 1135
|| ||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||
Sbjct 1076 ATGCTGACAGTTCAGTTGGGTTTGGAATCATTAATGCTTGTGTTAATCTTGGATTCTCGG 1135
Query 1136 ATAAAGCACATAGTATTCTCGAGGAAATGATTGCTCAGGGAGGAGGATCTGTAGGGATTG 1195
||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||
Sbjct 1136 ATAAAGCACATAGTATTCTTGAGGAAATGATTGCTCAAGGAGGAGGATCTGTGGGGATTG 1195
Query 1196 GGGTTTATGTGCCAATCTTAAAAGCTTATTGCAAAGAGTACAGAACAGCTGAAGCTACTC 1255
||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1196 GGGCTTATGTGCCAATCTTGAAAGCTTATTGCAAAGAGTACAGAACAGCTGAAGCTACTC 1255
Query 1256 AGCTGGTTACAGAGATCAGCAGCTCTGGGCTTCAATTAGACGTCGAGATCTCTAACGCTT 1315
|||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||
Sbjct 1256 AGCTGGTTACAGAGATCAACAGCTCTGGGCTTCAATTAGATGTCGAGATCTATAACGCTT 1315
Query 1316 TGATCGAAGCTTCCATGACGAATCAGGATTTTATATCTGCGTTTACATTGTTTAGGGATA 1375
|||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||
Sbjct 1316 TGATCGAAGCTTCCATGACGAACCAGGATTTCATATCTGCGTTTACATTATTTAGGGATA 1375
Query 1376 TGAGAGAAA-ATAGAGTGGTGGATTTGAAGGGGAGTTACTTAACAATAATGACAGGTCTT 1434
||||||||| | ||||||| ||||||||| ||||| |||||||||||||||||||||||
Sbjct 1376 TGAGAGAAACA-AGAGTGGGGGATTTGAAAGGGAGCTACTTAACAATAATGACAGGTCTC 1434
Query 1435 CTTGAGAACCAGAGACCTGAGTTAATGGCAGCGTTTCTAGACGAAGTTGTTGAAGACCCT 1494
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1435 CTTGAGAACCAGAGACCTGAGTTAATGGCAGCGTTTCTAGACGAAGTTGTCGAAGACCCA 1494
Query 1495 CGTGTTGAAGTGAATTCCCATGATTGGAATTCGATTATTCATGCCTTTTGTAAATCCGGG 1554
||||| ||||| |||||||||||||||||||||||||||||||| || |||||||| |||
Sbjct 1495 CGTGTCGAAGTAAATTCCCATGATTGGAATTCGATTATTCATGCGTTCTGTAAATCTGGG 1554
Query 1555 CGTCTGGAAGATGCACGGAGGACATTCAGAAGGATGGTTTTCCTAC-GTTATGAGCCAAA 1613
||||||||||||||| |||||||||||||||||||||||||||| | | |||||||| ||
Sbjct 1555 CGTCTGGAAGATGCAAGGAGGACATTCAGAAGGATGGTTTTCCT-CAGGTATGAGCCGAA 1613
Query 1614 CAACCAGACATACTTATCTTTGATTAATGGATATGTGAGCGGGGAAAAGTACTTTAACGT 1673
|||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||
Sbjct 1614 CAACCAGACATACTTATCCTTGATTAATGGATATGTGAGCGGCGAAAAGTACTTCAACGT 1673
Query 1674 CCTGCTCTTGTGGAACGAGATTAAAGGTAAGATATCGTCGGTGGAGGCAGAGAAGAGGTC 1733
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1674 CCTGCTCTTGTGGAACGAGATTAAAGGTAAGATATCGTCGATGGAGGCAGAGAAGAGGTC 1733
Query 1734 CAGACTAGATCATGCTCTAGTCGATGCATTCTTGTACGCATTGGTGAAAGGAGGATTCTT 1793
|| |||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct 1734 CAAACTAGACCATGCTCTAGTCGATGCGTTCTTGTACGCATTGGTGAAAGGAGGGTTCTT 1793
Query 1794 TGATGCAGCGATGCAAGTGGTAGAGAAATCTCAGGAGATGAAGATATTTGTGGATAAGTG 1853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1794 TGATGCAGCGATGCAAGTGGTAGAGAAATCTCAGGAGATGAAGATATTTGTGGATAAGTG 1853
Query 1854 GAGGTATAAGCAAGCGTTCATGGAGACTCACAAGAAACTCAGATTGCCAAAGCTGAGGAA 1913
||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1854 GAGGTATAAGCAAGCATTCATGGAGACTCACAAGAAACTTAGATTGCCAAAGCTGAGGAA 1913
Query 1914 GAGGAACTACAAGAAAATGGAATCTCTTGTTGCCTTCAAGAACTGGGCTG 1963
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1914 GAGGAACTACAAGAAAATGGAATCTCTTGTTGCCTTCAAGAACTGGGCTG 1963
> Ahg476027 jgi|Araly1|476027|fgenesh2_kg.2__1157__AT1G68980.1
Length=1894
Score = 1764 bits (955), Expect = 0.0
Identities = 1570/1856 (85%), Gaps = 85/1856 (5%)
Strand=Plus/Plus
Query 151 AAAACCCTAACTCCAGATCAAAAATCCTCCTTTGAATCTACCCTCCACGATTC-CTTAAA 209
||||||||||| ||| | ||||| ||||||||||||||||| |||||| |||| | | ||
Sbjct 95 AAAACCCTAACCCCACACCAAAAGTCCTCCTTTGAATCTACTCTCCACCATTCAC-T-AA 152
Query 210 T-GCCCATTACACCGATGAAGCATGGAAGGCT-TTTCGGT-CTCTCACCGCCGCTTCTTC 266
| |||| |||| ||| |||||||||||| | || || | || || |||||||||||||
Sbjct 153 TCACCCACGACACTGATCAAGCATGGAAGG-TCTTCCGATCCT-TCGCCGCCGCTTCTTC 210
Query 267 TCTACCGGAGAAGCGTCTCATCAATTCCCTTATTACCCATTTGTCC-GGTGTCGAAGGAA 325
||| || || ||||||||| ||||||| || || ||||| |||||| | || | |
Sbjct 211 TCTCCCCGACAAGCGTCTCCTCAATTCTCTCATCACCCACTTGTCCTCCT-TC-CACCAC 268
Query 326 GC-GGTGAGAGTA--T--ATC--TCATAGACTTAAACGAGCTTTTGCTTCTGCTG-CTTA 377
|| | | | | | | || || ||||| || || || |||| ||| | | ||||
Sbjct 269 GCAGATCAAAACACCTCCCTCAGGCACAGACTCAAGCGTGCCTTTGTTTCCAC-GACTTA 327
Query 378 TGTAATTGAGAAAGATCCGATTTTGCTTGAGTTTGAGACTGTTCGTACGCTTTTGGAGTC 437
|| || |||||||||||||||||||||||||||||||| | |||||| ||||||||||
Sbjct 328 CGTCATCGAGAAAGATCCGATTTTGCTTGAGTTTGAGACCATCCGTACGGTTTTGGAGTC 387
Query 438 GATGAAACTTGCGAAAGCTGCAGGGCCTGCTTTGGCTTTAGTGAAGTGTATGTTTAAAAA 497
|||||||| |||||| || | ||||| || |||||||| ||| ||||||||||||||||
Sbjct 388 AATGAAACTAGCGAAAACTTCCGGGCCAGCGTTGGCTTTGGTGGAGTGTATGTTTAAAAA 447
Query 498 CAGGTACTTTGTTCCTTTTGATCTCTGGGGGCATTTGGTTATTGATATCTGTCGTGAAAA 557
||||||||||| |||||||||||||||||||| |||| |||||||||||||| ||||||
Sbjct 448 CAGGTACTTTGCTCCTTTTGATCTCTGGGGGCGTTTGATTATTGATATCTGTAGTGAAAC 507
Query 558 TGGAAGCTTGGCTCCGTTTCTTAAGGTGTTTAAGGAAAGTTGTAGAATTTCTGTAGATGA 617
||||||| ||||| ||||||||||||| |||| |||||||||||||||| | ||| ||||
Sbjct 508 TGGAAGCCTGGCTGCGTTTCTTAAGGTTTTTAGGGAAAGTTGTAGAATTGCAGTATATGA 567
Query 618 GAAGCTTGAGTTTATGAAACCCGATTTGGTAGCTAGTAATGCGGCTCTTGAAGCGTGTTG 677
||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 568 GAAGCTTGATTTTATGAAACCGGATTTGGTAGCTAGTAATGCGGCTCTTGAAGCGTGTTG 627
Query 678 TCGACAGATGGAATCTTTGGCTGATGCTGAAAATGTGATTGAATCTATGGCTGTTTTAGG 737
|| ||| |||||||| |||||||||||||| |||||||||||||||||||||| || ||
Sbjct 628 CCGGCAGTTGGAATCTCTGGCTGATGCTGAAGATGTGATTGAATCTATGGCTGTGTTGGG 687
Query 738 TGTGAAGCCTGATGAATTGAGCTTTGGGTTTCTTGCTTATTTGTATGCGAGGAAGGGGCT 797
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 688 TGTGAAGCCTGATGAATTGAGCTTTGGGTTTCTTGCTTATTTGTATGCGAGAAAGGGGCT 747
Query 798 TCGAGAGAAGATTAGTGAGCTTGAGAATTTGATGGATGGTTTTGGTTTTGCAAGTAGAAG 857
|||||||||||| |||||| ||||||||| |||||||||||||| ||||||||||||||
Sbjct 748 TCGAGAGAAGATAAGTGAGATTGAGAATTCAATGGATGGTTTTGGGTTTGCAAGTAGAAG 807
Query 858 AATCCTTTATTCTAATATGATCAGTGGATATGTTAAGAGTGGTGATTTAGATAGTGTTTC 917
|||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct 808 AATCTTTTATTCTAGTGTGATCAGTGGATATGTTAAGAGTGGTGATTTAGATAGTGTTTC 867
Query 918 TGATGTTATATTGCATAGTCTTAAAGAAGGTGGAGAGGAATCGAGTTTCAGTGTGGAAAC 977
|||||||||| ||||||||||||||| ||||||||| || ||||||||| ||| ||||||
Sbjct 868 TGATGTTATACTGCATAGTCTTAAAGGAGGTGGAGAAGACTCGAGTTTCGGTGAGGAAAC 927
Query 978 GTATTGTGAATTGGTTAAAGGGTTTATAGAGAGTAAAAGCGTTAAGAGTTTAGCGAAAGT 1037
||| ||||||||||| |||||||||||||||||||||||||||||| ||||||| ||| |
Sbjct 928 GTACTGTGAATTGGTGAAAGGGTTTATAGAGAGTAAAAGCGTTAAGTGTTTAGCCAAACT 987
Query 1038 GATACTCGAAGCTCAGAAG-TTGGAATCTTCT-TACGTTGGTGTTGACAGTTCAGTTGGG 1095
|||| |||||||||||||| || ||||| ||| | ||||| |||||| ||||| |||||
Sbjct 988 GATAATCGAAGCTCAGAAGCTT-GAATC-TCTGTCCGTTGACGTTGACGGTTCAATTGGG 1045
Query 1096 TTTGGAATCATAAATGCTTGTGTAAATCTTGGTTTCTCGGATAAAGCACATAGTATTCTC 1155
||||||||| |||||||||||| || || ||||| |||| | | | | |||||||||
Sbjct 1046 TTTGGAATCGTAAATGCTTGTGCCAAGCTCGGTTTTTCGGGT--A--A-A-AGTATTCTC 1099
Query 1156 GAGGAAATGATTGCTCAGGGAGGAGGATCT-GTAGGGATTGGGGTTTATGTGCCAATCTT 1214
| ||||||| |||||| | ||||||||| || ||||||||||| |||||||| |||||
Sbjct 1100 AATGAAATGAATGCTCA--G-GGAGGATCTGGT-GGGATTGGGGTGTATGTGCCGATCTT 1155
Query 1215 AAAAGCTTATTGCAAAG-AGTACAGAACAGCTGAAGCTACTCAGCTGGTTACAGAGATCA 1273
|| || |||||||||| || |||||||| |||||||||||||||||||||||||||||
Sbjct 1156 GAAGGCCTATTGCAAAGAAG-GCAGAACAGATGAAGCTACTCAGCTGGTTACAGAGATCA 1214
Query 1274 GCAGCTCTGGGCTTCAATTAGACGTCGAGATCTCTAACGCTTTGATCGAAGCTTCCATGA 1333
||||||||||||||||||||||||| |||| || |||| || ||||||||||||||||||
Sbjct 1215 GCAGCTCTGGGCTTCAATTAGACGTTGAGACCTATAACACTATGATCGAAGCTTCCATGA 1274
Query 1334 CGAATCAGGATTTTATATCTGCGTTTACATTGTTTAGGGATATGAGAGAAA-ATAGAGTG 1392
|||| |||||||| |||||||| ||||| |||||||||||||| |||||| | | |||
Sbjct 1275 CGAAACAGGATTTCCTATCTGCGCTTACACTGTTTAGGGATATGCGAGAAACAAA-AGTA 1333
Query 1393 GTG-GATTTGAAGGGGA-GTTACTTAACAATAATGACAGGTCTTCTTGAGAACCAGAGAC 1450
| |||||||| | | | ||||||||||||||||||||||| |||||||| |||||||
Sbjct 1334 -TCAGATTTGAAAAG-ATGCTACTTAACAATAATGACAGGTCTCCTTGAGAATCAGAGAC 1391
Query 1451 CTGAGTTAATGGCAGCGTTTCTAGACGAAGTTGTTGAAGACCCTCGTGTTGAAGTGAATT 1510
|||||||||||| || |||| | || |||||||| ||||| ||||| || |||||||| |
Sbjct 1392 CTGAGTTAATGGGAGAGTTTGTGGAGGAAGTTGTGGAAGATCCTCGCGTAGAAGTGAAGT 1451
Query 1511 CCCATGATTGGAATTCGATTATTCATGCCTTTTGTAAATCCGGGCGTCTGGAAGATGCAC 1570
|||||||||||||||||||||| |||||||| || ||||| |||||||| |||||||||
Sbjct 1452 CCCATGATTGGAATTCGATTATCCATGCCTTCTGCAAATCTGGGCGTCTAGAAGATGCAA 1511
Query 1571 GGAGGACATTCAGAAGGATGGTTTTCCTAC-GTTATGAGCCAAACAACCAGACATACTTA 1629
||| |||||||||||||||| |||||| | || | |||||||| ||||||||||||||
Sbjct 1512 AGAGTACATTCAGAAGGATGGCTTTCCTTCAGT-ACGAGCCAAATAACCAGACATACTTG 1570
Query 1630 TCTTTGATTAATGGATATGTGAGCGGGGAAAAGTACTTTAACGTCCTGCTCTTGTGGAAC 1689
|| ||||| ||||||||||||||| | || |||||||| | || || | ||||||||
Sbjct 1571 TCGTTGATCAATGGATATGTGAGCTGCGAGAAGTACTTCGAGGTGGTGGTTTTGTGGAAA 1630
Query 1690 GAGATT-AAAGGTAAGATATCGTCGGTGGAGGCAGAGAAGAGGTCCAGACTAGATCATGC 1748
||| || |||| |||| || | | | | | | | ||| | |||||
Sbjct 1631 GAG-TTCAAAGACAAGA-AT-G-C-----A---A-A-AC----T--AGA---G--CATGC 1665
Query 1749 TCTAGTC-GATGCATTCTTGTACGCATTGGTGAAAGGAGGATTCTTTGATGCA-G-CGAT 1805
||| | | ||||| |||||| | ||||| || |||||||| ||||||| ||| | | ||
Sbjct 1666 TCTTG-CAGATGCGTTCTTGAATGCATTAGTCAAAGGAGGGTTCTTTG--GCACGGC-AT 1721
Query 1806 -GCAAGTGGTAGAGAAATCTCAGGAGATGAAGATATTTGTGGATAAGTGGAGGTATAAG- 1863
||||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||
Sbjct 1722 TGCAAGTGATAGAGAAATGTCAGGAGATGAAGATATTTGTGGATAAGTGGAGGTACAAGG 1781
Query 1864 CAAGCGTTCATGGAGACTCACAAGAAACTCAGATTGCCAAAGCTGAGGAAGAGGAAC-TA 1922
||| |||||||||||||||| ||||| ||||||||||||||| ||||||||||||| ||
Sbjct 1782 CAA-CGTTCATGGAGACTCAGAAGAACCTCAGATTGCCAAAGTTGAGGAAGAGGAAGATA 1840
Query 1923 CAAGAAAATGGAATCT-CTTGTTGCCTTCAAGAACTGGGCTGGTCTCAACACATGA 1977
||||||||||| | | |||| |||||| |||||||||| |||||| | |||||||
Sbjct 1841 -AAGAAAATGGAGT-TGCTTGATGCCTTTAAGAACTGGGTTGGTCTTACCACATGA 1894
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 74314067995
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5