BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G69550.1 Length=5199 Score E Sequences producing significant alignments: (Bits) Value Ahg908535 jgi|Araly1|908535|Al_scaffold_0002_1616 863 0.0 Ahg889979 jgi|Araly1|889979|Al_scaffold_0007_1965 507 4e-142 Ahg476559 jgi|Araly1|476559|fgenesh2_kg.2__1689__AT1G74220.1 357 5e-97 Ahg896915 jgi|Araly1|896915|Al_scaffold_0005_881 161 4e-38 > Ahg908535 jgi|Araly1|908535|Al_scaffold_0002_1616 Length=2394 Score = 863 bits (467), Expect = 0.0 Identities = 735/862 (85%), Gaps = 27/862 (3%) Strand=Plus/Plus Query 1483 TGATGGTTTCGAGAAGCTTGCTACGAAAGTTACAAGACTTGCTGGTAATCTCCCTTTGGG 1542 ||||||||||||| | |||||| |||||| |||||||||||||||| ||||||||||| Sbjct 678 TGATGGTTTCGAGGATCTTGCTTGGAAAGTGACAAGACTTGCTGGTAGGCTCCCTTTGGG 737 Query 1543 ACTTAGGGTTATGGGTTCTCATTTCCGGGGAATGTCCAAGGAAGATTGGAAAGGGGAACT 1602 |||||||||||||||||||| ||| ||||||||||||||||| ||||||| |||||| Sbjct 738 ACTTAGGGTTATGGGTTCTCGTTTAAAAGGAATGTCCAAGGAAGAGTGGAAAGCGGAACT 797 Query 1603 ACCAAGGTTACGGATTCGCCTTGACGGAGAAATAGGGAGCATTTTAAAATTTAGTTACGA 1662 |||||||||| || |||||||| ||||||| ||| ||||||||||||| | |||||| || Sbjct 798 ACCAAGGTTAAGGGTTCGCCTTAACGGAGATATATGGAGCATTTTAAAGTATAGTTATGA 857 Query 1663 TGTCTTGGACGACGAAGACAAAGATTTGTTTCTCCATATAGCATGtttttttAACGACGA 1722 || |||||||||||||||||||||||| |||||| ||||||| || ||||| ||||| || Sbjct 858 TGCCTTGGACGACGAAGACAAAGATTTATTTCTCTATATAGCCTGCTTTTTCAACGATGA 917 Query 1723 AGGCATTGATCATACCTTTGAAGATACTCTTCGTCACAAATTCTCAAACGTGCAGCGAGG 1782 | ||||||||||||||||||| |||||| || | || ||||| |||||||||| ||| Sbjct 918 AAGCATTGATCATACCTTTGAGGATACTTTTAAAAATAATTTCTCGAACGTGCAGCAAGG 977 Query 1783 GCTTCAGGTCTTAGTTCAAAGATCTCTCATATCCGAGGATTTA-ACTCAACCGATGCATA 1841 | ||| ||| ||||||||||||||||||||||||||||| | || ||||||||||||| Sbjct 978 GTTTCGGGTTTTAGTTCAAAGATCTCTCATATCCGAGGAGAGATAC-CAACCGATGCATA 1036 Query 1842 ATCTACTAGTTCAATTGGGTAGAGAAATTGTTCGTAACCAATCCGTTTATGAACCTGGGA 1901 ||||||||||||||||||||||||||||||| ||||| |||||| |||| ||||||| Sbjct 1037 ATCTACTAGTTCAATTGGGTAGAGAAATTGTGCGTAAGCAATCCA---ATGAGCCTGGGA 1093 Query 1902 AACGTCAATTTCTAGTTGATGGAAAGGA-GATTTGTGAAGTACTTACT-AGTCATACAGG 1959 ||||||||||| |||||||| | ||| | ||||||||||||| ||| | ||||||||| Sbjct 1094 AACGTCAATTTTTAGTTGATCCTAGGGATG-TTTGTGAAGTACTCACTGA-TCATACAGG 1151 Query 1960 AAGTGAAAGTGTTATAGGCATAAATTTCGAAGTTTATTG-GAGCATGGACGAACTAAATA 2018 |||||||||||||||||| ||| ||| ||||||||| | || | | ||| ||||||||| Sbjct 1152 TAGTGAAAGTGTTATAGGCCTAAGTTTGGAAGTTTAT-GAGAACGTAGACAAACTAAATA 1210 Query 2019 TAAGTGATAGAGTTTTTGAAGGAATGTCTAATCTTCAATTTTTTAGATTCGATGAAAATT 2078 ||||||| |||| ||||||| ||||||||||||||||||||| ||| || | ||| Sbjct 1211 TAAGTGAGAGAGCTTTTGAAAAAATGTCTAATCTTCAATTTTTGAGAATCTTT-AAA--- 1266 Query 2079 CTTATGGAAGATTGCACTTGCCACAAGGTCTAAACTATCTACCTCCAAAACTTAGAATTC 2138 ||||||| |||||| ||||||| ||||||| ||||||||||||| |||||||||| Sbjct 1267 -----GGAAGATGGCACTTACCACAAGTTCTAAACAATCTACCTCCAAATCTTAGAATTC 1321 Query 2139 TACATTGGGATTACTATCCGATGACAAGTTTGCCTTCTAAGTTTAATCTGAAGTTTCTTG 2198 || | |||||| | ||||| ||| || ||||||||||||||||||||| | |||| |||| Sbjct 1322 TAGAATGGGATGATTATCCAATGTCATGTTTGCCTTCTAAGTTTAATCCGGAGTTCCTTG 1381 Query 2199 TCAAGATAATATTGAAACACAGTGAGCTCGAGAAACTGTGGGAAGGAATTCAAC--CG-C 2255 |||||||| |||||||| ||| ||||||||||||||||||||| || ||||| || | Sbjct 1382 TCAAGATATTATTGAAAGGCAGCAAGCTCGAGAAACTGTGGGAAGAAAATCAACAGCGGC 1441 Query 2256 TTGTCAATCTCAAGGTGATGGATTTACGTTATTCTAGTCA-TTTGAAAGAGCTTCCTAAT 2314 || ||||||||||||||||||||||||| ||||| || | |||||| |||||||||||| Sbjct 1442 TTATCAATCTCAAGGTGATGGATTTACGCTATTC-AGAAAATTTGAAGGAGCTTCCTAAT 1500 Query 2315 CTCTCAACAG-CCATTAATCTC 2335 ||||||| || ||| ||||||| Sbjct 1501 CTCTCAA-AGGCCACTAATCTC 1521 Score = 737 bits (399), Expect = 0.0 Identities = 512/564 (91%), Gaps = 17/564 (3%) Strand=Plus/Plus Query 326 TCTTCAACATCTCCTCCATCTACGTTGTCTTCTTCAACA--T-CT-CATC--C---GTCT 376 ||||| |||||||||||||| ||||||||||||| |||| | || | || | |||| Sbjct 121 TCTTCTACATCTCCTCCATCCACGTTGTCTTCTTTAACATCTCCTCCGTCTTCTTTGTCT 180 Query 377 TCTTCAACTTCTCCTCCATCATCTTTGTCTTGCACCGGGACTCACCATGTATTTCCAAGC 436 ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||| | ||| Sbjct 181 TCTTCAACTTCTCCTTCATCTTCTTTGTCTTGCACCGGGACTCACCATGTCTTTGCGAGC 240 Query 437 TTCCGTGGGGATGACGTTCGCAG-AAACTTTCTCAGTCACATTCAAAAGGAGTTTCGGAG 495 ||||||||||| ||||||||||| ||| ||| | ||| |||||||| ||||||||| || Sbjct 241 TTCCGTGGGGAAGACGTTCGCAGAAAAATTT-TAAGTTACATTCAACAGGAGTTTCAAAG 299 Query 496 AAAAGGAATCACTCCGTTCATCGATAATGAGATTAGGAGAGGAGAATCCATCGGTCCTGA 555 ||||||||||| ||||||||| ||||||||||| | | ||||||||||||| |||||||| Sbjct 300 AAAAGGAATCATTCCGTTCATTGATAATGAGATCAAGCGAGGAGAATCCATTGGTCCTGA 359 Query 556 ACTCATTAAGGCCATTAGAGAATCTAAGATCGCAATTGTTC-TGCTCTCGAGGAACTATG 614 ||||||||||||||||||||||||||||||||| |||| || | |||||||||||||||| Sbjct 360 ACTCATTAAGGCCATTAGAGAATCTAAGATCGCGATTG-TCTTACTCTCGAGGAACTATG 418 Query 615 CTTCTTCAAAGTGGTGTCTTGAAGAATTGGTGGAGATTATGAAATGCAAGAAAGAGTTTG 674 |||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||| Sbjct 419 CTTCTTCAAAGTGGTGTCTTGACGAATTGGTGGAGATTATGGAATGCAAGAAAAAGTTTG 478 Query 675 GTCTAACAGTGTTTGCCA-TTTTCTATGAAGTTGATCCATCCCATGTTAAGAAGCTTACC 733 ||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||| Sbjct 479 GTCTAACAGTGTTTG-TAGTTTTCTATGAAGTTGATCCATCCCATGTTAAGAAGCTGACC 537 Query 734 GGAGAATTTGGAGCTGTCTTTCAGAAAACTTGTAAGGGTAGAACAAAGGAGAATATTATG 793 ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| || Sbjct 538 GGAGAATTTGGAGCTGTCTTTCAGAAAACTTGTAAGGGTAGAACAAAGGAGGAGATT-TG 596 Query 794 -AGATGGAGACAAGCTTTTGAGGAGGTTGCTACAATTGCTGGTTACGATTCAAGAAACTG 852 ||||||||||||||||||||||| || ||||||||||||||||||||||||||| |||| Sbjct 597 GAGATGGAGACAAGCTTTTGAGGAAGTGGCTACAATTGCTGGTTACGATTCAAGAGACTG 656 Query 853 GGAAAATGAAGCTGCCATGATTGA 876 ||||||||||||||||||| |||| Sbjct 657 GGAAAATGAAGCTGCCATGGTTGA 680 Score = 455 bits (246), Expect = 2e-126 Identities = 333/375 (89%), Gaps = 5/375 (1%) Strand=Plus/Plus Query 3785 CTCAACAAATGCACGAAGCTGGTATCACTCCCGCAGCTTCCAGATTCCTTATCAGTTTTA 3844 |||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||| Sbjct 1864 CTCAACAAATGCACGAAGTTGGTATCACTCCCGCAGCTTCCAAATTCCTTATCAATTTTA 1923 Query 3845 GTTGCAGAATCATGTGAGTCCTTGGAGACACTTGCTTGCTCCTTTCCGAATCCCCAAGTT 3904 ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| Sbjct 1924 AATGCAGAATCATGTGAGTCCTTGGAGACACTTGCTTGCTCCTTTCCTAATCCCAAAGTT 1983 Query 3905 TGGCTCAAATTTATTGACTGCTGGAAACTGAATGAAAAAGGGAGAGATATCATCGTCCAG 3964 || |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| Sbjct 1984 TGTCTCAAATTTATTGACTGCTGGAAACTGAATGAAAAAGGGAGAGACATCATCATCCAG 2043 Query 3965 ACATCGACAAGTAACTACACGATGTTACCAGGTAGAGAAGTGCCTGCGTTTTTCACTTAC 4024 ||||||||||||| ||| |||| || |||||||||||| | |||||||| ||| ||||| Sbjct 2044 ACATCGACAAGTAGTTACGCGATCTTGCCAGGTAGAGAAATTCCTGCGTTCTTCGCTTAC 2103 Query 4025 CGAGCTACCACTGGAGGTTCTCTGGCAGTGAAGTTGAATGAGAGGCAT-TGTCGTACATC 4083 |||||||| |||||||||||| ||||||||||||| ||| |||||| | | || |||||| Sbjct 2104 CGAGCTACTACTGGAGGTTCTGTGGCAGTGAAGTTTAATCAGAGGCGTCT-TCCTACATC 2162 Query 4084 TTGTAGATTTAAAGCTTGCATCTTGCTGGTT-AGAAAGGGTGACAAAATTGACTGTGAGG 4142 || ||||||||| |||||||||||||||||| | || |||||| || ||| | | || Sbjct 2163 TTTTAGATTTAAGGCTTGCATCTTGCTGGTTTACAA-GGGTGATGAAGCTGATTACGCGG 2221 Query 4143 AATGGGGGTCCGTAT 4157 ||||||| ||| ||| Sbjct 2222 AATGGGG-TCCATAT 2235 Score = 147 bits (79), Expect = 1e-33 Identities = 137/164 (84%), Gaps = 8/164 (5%) Strand=Plus/Plus Query 4225 TTTAACTGAGCATCTGTACACATTCGAAATCGAAG-CAAAAGGTGTGAAATCC-GTAGAG 4282 |||||| ||||||||||||| ||||||||| |||| |||| |||| ||||| | |||| Sbjct 2235 TTTAACGGAGCATCTGTACATATTCGAAATGGAAGTTAAAA-ATGTGGAATCCAG-AGAG 2292 Query 4283 CTTGTCATT-AAGTTC-CAATTCGGCAGGAAAAAATGGGAGATAGGTGAATGCGGGATAC 4340 || || || |||||| || | ||| | | ||||||||||||| |||||||||||| Sbjct 2293 ATTTTC-TTAAAGTTCGGAA-CCCACAGTAGCATATGGGAGATAGGTAAATGCGGGATAC 2350 Query 4341 GCCCACTCTTGGAGGAGGACACTCACGTCGAAAGTTCTATATAA 4384 |||||||||||||||| ||||||||||||||| ||||||||||| Sbjct 2351 GCCCACTCTTGGAGGACGACACTCACGTCGAAGGTTCTATATAA 2394 > Ahg889979 jgi|Araly1|889979|Al_scaffold_0007_1965 Length=1731 Score = 507 bits (274), Expect = 4e-142 Identities = 685/875 (78%), Gaps = 61/875 (7%) Strand=Plus/Plus Query 389 CCTCCATCATCTTTGTCTTGCACCG-GGACTCACCATGTATTTCCAAGCTTCCGTGG-GG 446 |||||||| |||||||||| || | ||| ||| | || ||||||||||||||||| | Sbjct 115 CCTCCATCTTCTTTGTCTTACA-AGTGGAAACACGACGTCTTTCCAAGCTTCCGTGGTGT 173 Query 447 ATGACGTTCG-CAGAAACTTTCTCAGTCACATTCAAAAGGAGTTTCGGAGAAAAGGAATC 505 | || || || | | ||||||||||||| ||||| |||||||| | |||||||||||| Sbjct 174 A-GATGTCCGTC-GGGACTTTCTCAGTCATATTCAGAAGGAGTTCCAAAGAAAAGGAATC 231 Query 506 ACTCCGTTCATCGATAATGAGATTAGGAGAGGAGAATCCATCGGTCCTGAACTCATTA-A 564 || |||||||||||||||||||| | ||||||||||||||| ||||||||||| | || | Sbjct 232 ACACCGTTCATCGATAATGAGATCAAGAGAGGAGAATCCATTGGTCCTGAACTTA-TACA 290 Query 565 GGCCATTAGAGAATCTAAGATCGCAATTGTTC-TGCTCTCGAGGAACTATGCTTCTTCAA 623 ||||||||||| ||||||||||| | | || ||||||| | ||||||||||||||||| Sbjct 291 GGCCATTAGAGGGTCTAAGATCGCGA-TCATCTTGCTCTCAAAGAACTATGCTTCTTCAA 349 Query 624 AGTGGTGTCTTGAAGAATTGGTGGAGATTATGAAATGCA-AGAAAGAGTTTGGTCTAACA 682 ||||||||||||| |||||||||||||||||||| || | |||| ||||| |||| ||| Sbjct 350 AGTGGTGTCTTGACGAATTGGTGGAGATTATGAAGTGTAGAGAA-GAGTTAGGTCAAACT 408 Query 683 GTGTTTGCCATTTTCTATGAAGTTGATCCATCCCATGTTAAGAAGCTTACCGGAGAATTT 742 ||| | |||||||||||| |||| ||||||| |||| ||||||| |||||||||| Sbjct 409 GTGATGGCCATTTTCTATAAAGTAGATCCATATGATGTAAAGAAGCAGGTCGGAGAATTT 468 Query 743 GG-A-GCTGTCTTTCAGAAAA-CTTGTAAGGGTAGA-ACAAAGGAGAATATTATGAGATG 798 || | | || |||||||||| ||||| |||| | || |||||| | |||| ||||| Sbjct 469 GGCAAG--GT-TTTCAGAAAAACTTGTGCTGGTA-ACACTAAGGAGGACATTAAAAGATG 524 Query 799 GAGACAAGCTTTTG-AGGAGGTTGCTACAATTGCTGGTTACGATTCAAGAAACTGGGAAA 857 |||||||||||| | | || | || |||||||| |||||| ||||||| || ||||| | Sbjct 525 GAGACAAGCTTTAGGAAAAG-TGGCCACAATTGCGGGTTACCATTCAAGCAATTGGGATA 583 Query 858 ATGAAGCTGCCATGATTGAAGAAATT-GCCATTGAAATTTCCAAA-AGATTGATTAATTC 915 ||||||| |||||||| ||| | | | |||||||| ||||||| || | ||||| ||| Sbjct 584 ATGAAGCGGCCATGATCGAA-AGACTCGCCATTGATGTTTCCAATGAGCT-GATTAGTTC 641 Query 916 CT-CACCGT-TCAGTGGGTTTGAAGGTTT-GATTGGGATGAAAGCTCATATAGAAAAGAT 972 | | || | | |||| ||||| ||||| | |||| |||||||||||||| ||||| || Sbjct 642 -TGCGCCATCT-AGTGATTTTGACGGTTTTG-TTGGAATGAAAGCTCATATGGAAAATAT 698 Query 973 -GAAACAGTTGCTTT-GCCTCGATTCAACAGATGAAAGG-AGGACGGTTGGTATTTCAGG 1029 ||| || || ||| |||| || || |||||| | | | | | || |||| || Sbjct 699 AGAACCA-TT-CTTCCGCCTAGACTCG---GATGAA-GTCAAAATGATAGGGATTTGTGG 752 Query 1030 TCCTTCTGGAATTGGTAAGAGCACTATTGCTAGAGTTCTACATAATCAA-ATCTCTGATG 1088 |||||||||||||||||||||||| ||||| ||| || || | | || | |||| ||| Sbjct 753 TCCTTCTGGAATTGGTAAGAGCACCATTGCCAGATTTATATTTGGTGAATA-CTCTCATG 811 Query 1089 -GTTTTCAAA-TGAGTGTTTTCATG-AAA-T-TCAAACCAAGTTATACAAGACCAATTTG 1143 ||| | | | ||||| |||||| ||| | ||||| | ||||| ||||||| || | Sbjct 812 AGTT--CGAGCTAAGTGTCTTCATGGAAAATATCAAAAGACGTTATCCAAGACC--TT-G 866 Query 1144 TT-CTGATGA-T-CACGATGTGAAGTTGCAATTAGAGCAGCAATTTCTAG-CTCAATTGA 1199 || | ||||| | || | | |||| ||||||||| | || | ||| | | ||||| | | Sbjct 867 TTAC-GATGAGTACA-G-TATGAAATTGCAATTACAAAAGGAGTTTTT-GTCTCAAATAA 922 Query 1200 TTAACCAAGAGGATATCAAGATTCATCAGTTAGGA 1234 | ||||| |||||||| ||||||||||| |||||| Sbjct 923 TGAACCAGGAGGATATAAAGATTCATCATTTAGGA 957 > Ahg476559 jgi|Araly1|476559|fgenesh2_kg.2__1689__AT1G74220.1 Length=975 Score = 357 bits (193), Expect = 5e-97 Identities = 273/308 (89%), Gaps = 20/308 (6%) Strand=Plus/Minus Query 4487 CGTGAAGCTATTATTACCAATATGGATACTGAAAAGAGATTCATTGGAGACAATGCTCCA 4546 |||||||||||| ||||| || ||||| |||||||||||||||||||| | | ||||||| Sbjct 378 CGTGAAGCTATTGTTACCCATGTGGATGCTGAAAAGAGATTCATTGGACATAGTGCTCCA 319 Query 4547 TTCAACTGGAGCTGTAGAGGTTGTTCTTGCGAAAACATGTGAAGGGATTCTGTAAGGAGG 4606 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 318 TT---CTGGAGCTGTAGAGGTTGTTCTTGCGAAAACATGTGAAGGGATTCTGTAAGGAGG 262 Query 4607 TTTATTAGGGCTCGAGGTC-TT-T-GTTGTTGT-GTTGTTA-GT-G---G---ATCTTTC 4654 | ||||||||||||| ||| || | |||||||| |||||| || | | ||||||| Sbjct 261 TGTATTAGGGCTCGAAGTCGTTGTTGTTGTTGTTGTTGTTGTGTTGTTTGTGGATCTTTC 202 Query 4655 CATGACTTGTGTCGGAAGATATTGCTCTACATTGTT-TT-AGAATCTGATCAGGTCTTGG 4712 |||||| ||||||||| || |||||||||||||||| || ||| |||||||||||||||| Sbjct 201 CATGACCTGTGTCGGAGGAGATTGCTCTACATTGTTGTTTAGATTCTGATCAGGTCTTGG 142 Query 4713 TTCGCGGCTTCTATGgaagaataagaagaggaagaagaagaagaaagTCTTGAGATTGGA 4772 |||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 141 TTCG-G-CTTCTATGGAAGAACAAGAAGAGGAAGAAGAAGAAGAAAGTCTTGAGATTGGA 84 Query 4773 TCTTGCTG 4780 |||| ||| Sbjct 83 TCTT-CTG 77 > Ahg896915 jgi|Araly1|896915|Al_scaffold_0005_881 Length=3243 Score = 161 bits (87), Expect = 4e-38 Identities = 270/355 (76%), Gaps = 25/355 (7%) Strand=Plus/Plus Query 3785 CTCAACAAATGCACGAAGCTGGTATCACTCCCGCAGCTTCCAGATTCCTTATCAGTTT-T 3843 |||||| ||||| |||||| ||||||||||| ||||||||||||||||||||| | | Sbjct 2668 CTCAACGGATGCAAGAAGCTAGTATCACTCCCACAGCTTCCAGATTCCTTATCA-TACCT 2726 Query 3844 AGTTGCAG-AATCAT-GTGAGTCCTTGGAGACACTTGCTTGCTCCTTTC-CGAATCCCCA 3900 || |||| || || ||||||| ||||||| ||||| || ||||||| | ||||| | Sbjct 2727 AGAGGCAGTAA--ATTGTGAGTCATTGGAGAGACTTGATTTCTCCTTTTAC-AATCCA-A 2782 Query 3901 AGTT-TGGCTCAAATTTATTGACTGCTGGAAACTGAATGAAA-AAGGGAGAGATA-TCAT 3957 || | | ||||| ||| || |||||| ||| ||||| ||| ||| || || | |||| Sbjct 2783 AGATATATCTCAACTTTGTTAACTGCTTCAAATTGAAT-AAAGAAGCCAGGGA-ACTCAT 2840 Query 3958 CGTCCAGACATCG-ACAAGTAACTACACGATGTTACCAGGTAGAGAAGTGCCTGCGTTTT 4016 | ||||||| | | || | | ||| || | ||||| ||| ||||||||||||| | Sbjct 2841 CATCCAGAC-TAGTACT-G-A-CTATGCGGTCTTACCTGGTGGAGAAGTGCCTGCAAAAT 2896 Query 4017 TCACTTACCGAGCTACCACTGGAGGTTCTC-TGGCAGTGAAGTTGAATGAGAGGCAT-TG 4074 ||||||||||||||| | ||| ||| | || ||| || |||||| | |||| | | Sbjct 2897 TCACTTACCGAGCTAATAGAGGAAATTC-CATGATAGTAAACTTGAATCATAGGCCTCTT 2955 Query 4075 TCGTACATCTTGTAGATTTAAAGCTTGCATCTTGCTGGTTAG-AAAGGGTGACAA 4128 || ||| | | |||||||||||||||||||||||||||| |||||| ||||| Sbjct 2956 TCA-ACAACCTCAAGATTTAAAGCTTGCATCTTGCTGGTTAATAAAGGG-GACAA 3008 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 196833767556 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5