BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G69670.1 Length=2337 Score E Sequences producing significant alignments: (Bits) Value Ahg476100 jgi|Araly1|476100|fgenesh2_kg.2__1230__AT1G69670.1 2121 0.0 Ahg472710 jgi|Araly1|472710|fgenesh2_kg.1__2664__AT1G26830.1 2078 0.0 > Ahg476100 jgi|Araly1|476100|fgenesh2_kg.2__1230__AT1G69670.1 Length=2049 Score = 2121 bits (1148), Expect = 0.0 Identities = 1338/1427 (94%), Gaps = 24/1427 (2%) Strand=Plus/Plus Query 59 TTGATCCAAAATACGCCGATAAAACTTGGAAGATCCTTGAACATGCGATTCATGAGATTT 118 |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| Sbjct 32 TTGATCCAAAATACGCCGATAAAACTTGGAAGATTCTGGAACATGCGATTCATGAGATTT 91 Query 119 ACAATCACAACGCTAGTGGTCTCAGTTTCGAAGAGCTTTACAGAAACGCATACAACATGG 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 92 ACAATCACAACGCTAGTGGTCTCAGTTTCGAAGAGCTTTACAGAAACGCATACAACATGG 151 Query 179 TTCTACATAAGTATGGTGATAAGCTTTATACTGGACTTGTTACCACTATGACATTTCATC 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 152 TTCTACATAAGTATGGTGATAAGCTTTATACTGGACTTGTTACCACTATGACATTTCATC 211 Query 239 TCAAAGAGATATGTAAGTCTATTGAAGAAGCTCAAGGAGGAGCATTT-TTAGAATTGCTT 297 |||||||||||||||||||||||||||||||||| ||||| || ||| |||||||||||| Sbjct 212 TCAAAGAGATATGTAAGTCTATTGAAGAAGCTCATGGAGGTGC-TTTCTTAGAATTGCTT 270 Query 298 AATAGGAAATGGAATGATCATAACAAAGCGTTGCAAATGATTAGGGATATTCTCATGTAT 357 |||||||||||||| |||| ||||||||||||| || | | | | | | Sbjct 271 GATAGGAAATGGAATCATCACAACAAAGCGTTGC-AA--A-T---G--------A--T-T 312 Query 358 ATGGATCGTACTTACGTTTCTACTACTAAGAAAACTCATGTTCATGAGCTTGGACTTCAT 417 |||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||| Sbjct 313 ATGGATCGGACTTACGTTTCTAGTACTAAGAAAAGGCATGTTCATGAGCTTGGACTTCAT 372 Query 418 CTCTGGAGAGATAATGTTGTGTATTCGAGTAAGATTCAGACTAGGCTATTGAATACGCTT 477 || ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 373 CTTTGGAGGGATAATGTTGTGTATTCGAGTAAGATTCAGACTAGGCTTTTGAATACGCTT 432 Query 478 CTTGATTTAGTTCATAAGGAACGGACTGGTGAAGTTATAGATAGGGTGTTGATGAGGAAT 537 |||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||| Sbjct 433 CTTGATTTAGTTTATAAGGAACGGACCGGTGAAGTTATAGATAGGTTGTTGATGAGGAAT 492 Query 538 GTGATTAAGATGTTTATGGATTTAGGTGAATCTGTTTATCAAGATGATTTTGAGAAGCCG 597 ||||||||||||||||||||||| ||||||||||| ||||| |||||||| ||||||||| Sbjct 493 GTGATTAAGATGTTTATGGATTTGGGTGAATCTGTGTATCAGGATGATTTCGAGAAGCCG 552 Query 598 TTTTTGGAAGCTTCTGCTGAGTTTTATAAGGTTGAGTCA-ATGGAGTTTATTGAGTCTTG 656 |||||||||||||||||||||||||| |||||||||||| | || ||||||||||||||| Sbjct 553 TTTTTGGAAGCTTCTGCTGAGTTTTACAAGGTTGAGTCACA-GGGGTTTATTGAGTCTTG 611 Query 657 TGATTGTGGTGAGTATTTGAAGAAAGCTGAGAAGCCTTTAGTGGAAGAAGTCGAAAGGGT 716 |||||||||||| |||||||||||||| ||||| ||||| |||||||||||||||||||| Sbjct 612 TGATTGTGGTGATTATTTGAAGAAAGCGGAGAAACCTTTTGTGGAAGAAGTCGAAAGGGT 671 Query 717 TG-TGAATTATTTGGATGCTAAGAGCGAAGCGAAGATTACTAGTGTGGTTGAAAGAGAGA 775 || | | ||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct 672 TGCT-CACTATTTGGATGCCAAGAGCGAAGCGAAGATTACTAGTGTGGTTGAAAGAGAAA 730 Query 776 TGATTGCTAACCATGTGCAGAGACTAGTTCATATGGAGAATTCAGGTTTGGTTAATATGC 835 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 731 TGATTGCTAACCATGTGCAGAGACTAGTTCATATGGAGAATTCAGGTTTGGTTAATATGC 790 Query 836 TTTTGAATGATAAGTATGAGGATATGGGTAGAATGTATAGTTTGTTCCGTAGGGTTGCTA 895 ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| | Sbjct 791 TTTTGAATGATAAGTATGAGGATATGGGTAGAATGTACAGTTTGTTCCGCAGGGTTGCCA 850 Query 896 ATGGTCTTGTAACGGTTAGAGATGTTATGACTTTGCATCTTAGGGAAATGGGAAAACAGT 955 |||||||||| || ||||||||||||||||||||||||||||||| |||||||||||| Sbjct 851 ATGGTCTTGTTACTATTAGAGATGTTATGACTTTGCATCTTAGGGAGATGGGAAAACAGC 910 Query 956 TGGTTACTGATCCAGAGAAATCAAAGGATCCGGTTGAATTTGTGCAGCGTCTATTGGATG 1015 ||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||| |||| Sbjct 911 TGGTTACCGATCCAGAGAAATCAAAGGTTCCCGTTGAATTTGTGCAGCGTCTATTAGATG 970 Query 1016 AGCGGGATAAGTATGACAGAATTATCAACATGGCATTTAACAACGATAAGACGTTCCAGA 1075 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 971 AGCGGGATAAGTATGACAAAATTATCAACATGGCATTTAACAACGATAAGACGTTCCAGA 1030 Query 1076 ATGCGCTAAATTCTTCGTTTGAGTATTTCGTCAACTTGAACACACGTTCTCCTGAGTTTA 1135 ||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 1031 ATGCGCTGAATTCTTCGTTTGAGTATTTCCTCAACTTGAACACCCGTTCTCCTGAGTTTA 1090 Query 1136 TCTCCCTGTTTGTTGATGATAAGCTACGAAAAGGACTAAAAGGTGTGGGAGAGGAGGATG 1195 ||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct 1091 TCTCCTTGTTTGTTGATGATAAACTACGAAAAGGACTAAAAGGTGTGGGGGAGGAGGATG 1150 Query 1196 TCGATCTTATTCTTGATAAGGTGATGATGTTGTTTCGCTACTTACAGGAGAAAGACGTTT 1255 | |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct 1151 TGGATCTTATTCTTGATACGGTGATGATGTTGTTTCGCTATTTACAGGAGAAAGACGTTT 1210 Query 1256 TTGAGAAATATTACAAACAGCATCTGGCGAAAAGGCTTTTATCTGGAAAAACTGTGTCGG 1315 |||||||||| |||||||| | |||||| ||||||||||||||||||||||||||||||| Sbjct 1211 TTGAGAAATACTACAAACAACGTCTGGCAAAAAGGCTTTTATCTGGAAAAACTGTGTCGG 1270 Query 1316 ATGATGCAGAGAGGAATCTGATAGTGAAACTGAAGACGGAATGTGGGTATCAATTCACTT 1375 ||||||| ||||||||||||||||| ||||||||||| |||||||||||||| ||||||| Sbjct 1271 ATGATGCTGAGAGGAATCTGATAGTTAAACTGAAGACAGAATGTGGGTATCAGTTCACTT 1330 Query 1376 CGAAACTTGAAGGTATGTTCACTGACATGAAGACCTCACACGACACGCTGCTAGGATTTT 1435 ||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||| Sbjct 1331 CGAAACTGGAAGGTATGTTCACTGACATGAAGACCTCACACGATACACTGCTAGGATTTT 1390 Query 1436 ATAATAGCCATCCCGAGCTTTCAGAAGGACCTACACTTGTTGTTCAG 1482 ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1391 ATAATAGCCATCCCGAGCTTTCAGAAGGACCGACACTTGTTGTTCAG 1437 Score = 568 bits (307), Expect = 9e-161 Identities = 331/343 (97%), Gaps = 0/343 (0%) Strand=Plus/Plus Query 1510 CAGCCAACCATACAATGTAACCTACCTGCAGAAGTTTCTGTTCTGTGTGAGAAGTTCAGG 1569 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1435 CAGCCAACCATACAGTGTAACCTACCTGCAGAAGTTTCTGTTCTGTGTGAGAAGTTCAGG 1494 Query 1570 TCATATTACCTCGGGACTCACACCGGTAGGAGATTGTCTTGGCAAACGAATATGGGAACA 1629 |||||||||||||||||||||||||| | || ||||||||||||||| ||||||| |||| Sbjct 1495 TCATATTACCTCGGGACTCACACCGGCATGAAATTGTCTTGGCAAACCAATATGGAAACA 1554 Query 1630 GCAGATATCAAAGCAGTGTTTGGAAAGGGTCAGAAGCATGAACTAAACGTTTCGACTTTC 1689 ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| Sbjct 1555 GCAGATATCAAAGCAGTGTTTGGAAAGGGTCAGAAGCTTGAACTAAATGTTTCGACTTTT 1614 Query 1690 CAAATGTGTGTCCTTATGTTGTTCAACAACTCTGATCGACTAAGCTACAAAGAGATCGAA 1749 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1615 CAAATGTGTGTCCTTATGTTGTTCAACAACTCTGATCGACTGAGCTACAAAGAGATCGAA 1674 Query 1750 CAGGCAACTGAAATCCCCACCCCAGACCTAAAGCGTTGCTTGCAGTCAATGGCGTGTGTA 1809 ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| Sbjct 1675 CAGGCAACTGAAATCCCCACCTCAGACCTAAAGCGTTGCTTGCATTCAATGGCGTGTGTA 1734 Query 1810 AAAGGTAAAAACGTGCTAAGAAAAGAACCAATGAGCAAGGAGA 1852 ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1735 AAAGGTAAAAACGTGCTAAGAAAAGAACCAATGAGCAAGGAGA 1777 Score = 300 bits (162), Expect = 4e-80 Identities = 180/189 (95%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 2014 GTGAGGATAATGAAGTCTAGACGAGTGTTGGATCACAACAACATAATCGCAGAGGTCACC 2073 |||||||| |||||| | |||||||||||||||||||||||||| ||||||||||||||| Sbjct 1861 GTGAGGATTATGAAGGCAAGACGAGTGTTGGATCACAACAACATTATCGCAGAGGTCACC 1920 Query 2074 AAACAGTTGCAGACGCGGTTCTTGGCAAACCCAACAGAGATAAAGAAGAGAATTGAATCA 2133 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1921 AAACAGTTGCAGTCGCGGTTCTTGGCAAACCCAACAGAGATAAAGAAGAGAATTGAATCG 1980 Query 2134 CTCATTGAGCGTGATTTCTTGGAGAGGGATAATACAGACCGGAAACTTTACCGCTATCTA 2193 |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| || Sbjct 1981 CTCATTGAGCGTGATTTCTTGGGGAGGGATAATACAGACCGAAAACTTTACCGCTATTTA 2040 Query 2194 GCGTAAAAA 2202 ||||||||| Sbjct 2041 GCGTAAAAA 2049 Score = 65.8 bits (35), Expect = 1e-09 Identities = 35/35 (100%), Gaps = 0/35 (0%) Strand=Plus/Plus Query 1 ATGAGTAATCAGAAGAAGAGAAATTTCCAGATTGA 35 ||||||||||||||||||||||||||||||||||| Sbjct 1 ATGAGTAATCAGAAGAAGAGAAATTTCCAGATTGA 35 > Ahg472710 jgi|Araly1|472710|fgenesh2_kg.1__2664__AT1G26830.1 Length=2555 Score = 2078 bits (1125), Expect = 0.0 Identities = 1871/2231 (84%), Gaps = 52/2231 (2%) Strand=Plus/Plus Query 1 ATGAGTAATCAGAAGAAGAGAAATTTCCAGATTGAAGCGTTTAAGCAACGAGTCGTCGTT 60 |||||||||||||||||||| ||||| ||||| || ||||||||||| || ||||| || Sbjct 212 ATGAGTAATCAGAAGAAGAGGAATTTTCAGATAGAGGCGTTTAAGCATCGCGTCGTTGTA 271 Query 61 GATCCAAAATACGCCGATAAAACTTGGAAGATCCTTGAACATGCGATTCATGAGATTTAC 120 ||||| |||||||| |||||||||||| |||| ||||| | |||||| ||| ||||||| Sbjct 272 GATCCCAAATACGCTGATAAAACTTGGCAGATTCTTGAGCGTGCGATCCATCAGATTTAT 331 Query 121 AATCACA-ACGCTAGTGGTCTCAGTTTCGAAGAGCTTTACAGAAACGCATACAACATGGT 179 ||||| | | ||||| ||||||||||||||||| ||||||||||| || ||||||||||| Sbjct 332 AATCA-AGATGCTAGCGGTCTCAGTTTCGAAGAACTTTACAGAAATGCGTACAACATGGT 390 Query 180 TCTACATAAGTATGGTGATAAGCTTTATACTGGACTTGTTACCACTATGACATT-TCATC 238 || || |||| |||||| |||||||||||||| || || | |||||||| || ||||| Sbjct 391 CCTGCACAAGTTTGGTGAGAAGCTTTATACTGGGTTTATTGCTACTATGAC-TTCTCATC 449 Query 239 TCAAAGAGATATGT--AAGTC-TATTGAAGAAGCTCAAGGAGGAG-CATT-TTTAGAATT 293 ||||||| | | || ||| | ||| || | |||||||||||| | |||| || ||| Sbjct 450 TCAAAGA-A-AAGTCCAAG-CTTATCGAGGCAGCTCAAGGAGG-GTCATTCCTT-GAAGA 504 Query 294 GCTTAATAGGAAATGGAATGATCATAACAAAGCGTT-GCAAATGATTAGGGATATTCTCA 352 |||||||| |||||||||||| || ||||||||||| | | |||||| | || ||||||| Sbjct 505 GCTTAATAAGAAATGGAATGAGCACAACAAAGCGTTAG-AGATGATTCGAGACATTCTCA 563 Query 353 TGTATATGGATCGTACTTACGTTTCTA-CTACTAAGAAA-ACTCATGTTCATGAGCTTGG 410 ||||||||||| | |||||| || | | || || ||| |||||||||||| | | || Sbjct 564 TGTATATGGATAGGACTTACATTGAGAGC-ACCAA-AAAGACTCATGTTCATCCGATGGG 621 Query 411 ACTTCATC-TCTGGAGAGATAATGTTGTGTA-TTCGAGTAAGATTCAGACTAGGCTAT-T 467 ||| | | | ||||| |||||||||||| | ||| | |||||| || || ||||| | | Sbjct 622 GCTT-AACTTGTGGAGGGATAATGTTGTGCATTTC-ACTAAGATACATACAAGGCT-TCT 678 Query 468 GAATACGCTTCTTGATTTAGTTCATAAGGAACGGACTGGTGAAGTTATAGATAGGGTGTT 527 || || ||||||||| |||| || ||||||||||||||||||||||| || |||| ||| Sbjct 679 AAACACTCTTCTTGATCTAGTGCAGAAGGAACGGACTGGTGAAGTTATTGACAGGGGGTT 738 Query 528 GATGAGGAATGTGATTAAGATGTTTATGGATTTAGGTGAATCTGTTTATCAAGATGATTT 587 |||||||||||| ||||||||||||||||| || ||||||||||| ||||| || ||||| Sbjct 739 GATGAGGAATGTCATTAAGATGTTTATGGACTTGGGTGAATCTGTGTATCAGGAGGATTT 798 Query 588 TGAGAAGCCGTTTTTGGAAGCTTCTGCTGAGTTTTATAAGGTTGAGTC-AATGGAGTTTA 646 |||||||||||||||||| || ||| |||||||||||||||||||||| | |||||||| Sbjct 799 TGAGAAGCCGTTTTTGGATGCGTCTTCTGAGTTTTATAAGGTTGAGTCTCA-GGAGTTTA 857 Query 647 TTGAGTCTTGTGATTGTGGTGAGTATTTGAAGAAAGCTGAG-AA-GCCTTTAGTGGAAGA 704 |||| |||||||||||||| || || | |||||||| ||| || ||| | | | ||||| Sbjct 858 TTGAATCTTGTGATTGTGGGGATTACCTAAAGAAAGCAGAGAAACGCC-TAACT-GAAGA 915 Query 705 AGTCGAAAGGGTTGTGA-ATTATTTGGATGCTAAGAGCGAAGCGAAGATTACTAGTGTGG 763 | | || ||||| | | | || |||||||| |||||||||| ||||||||||||||||| Sbjct 916 AATAGAGAGGGTAG-CACACTACTTGGATGCCAAGAGCGAAGAGAAGATTACTAGTGTGG 974 Query 764 TTGA-AAGAGAGATGATTGCTAACCATGTGCAGAGACTAGTTCATATGGAGAATTCAGGT 822 |||| || |||||||||||| ||||| |||||||||| ||||| |||||||| |||||| Sbjct 975 TTGAGAA-AGAGATGATTGCCAACCACATGCAGAGACTGGTTCACATGGAGAACTCAGGT 1033 Query 823 TTGGTTAATATGCTTTTGAATGATAAGTATGAGGATATGGGTAGAATGTATAGTTTGTTC 882 |||||||||||||| ||||||| |||||||| ||| ||||||||||||| | ||||| Sbjct 1034 CTGGTTAATATGCTTCTGAATGACAAGTATGATGATTTGGGTAGAATGTACAACTTGTTT 1093 Query 883 CGTAGGGTTGCTAATGGTCTTGTAACGGTTAGAGATGTTATGACTT-TGCATCTTAGGGA 941 || |||||| ||||||||||||| || || ||||| |||||||||| | ||||||||||| Sbjct 1094 CGCAGGGTTACTAATGGTCTTGTTACTGTCAGAGACGTTATGACTTCT-CATCTTAGGGA 1152 Query 942 AATGGGAAAACAGTTGGTTACTGATCCAGAGAAA-TCAAAGGATCCGGTTGAATTTGTGC 1000 ||||||||||| ||||||||||||| || ||| ||||||||||| || |||||||| | Sbjct 1153 GATGGGAAAACAACTGGTTACTGATCCGGA-AAAGTCAAAGGATCCAGTGGAATTTGTAC 1211 Query 1001 AGCGTCTATTGGATGAGCGGGATAAGTATGACAGAATTATCAACATGGCATTTAACAACG 1060 ||||||||||||||||||||||||| ||||||| ||| |||| || |||||| ||| | Sbjct 1212 AGCGTCTATTGGATGAGCGGGATAAATATGACAAAATCATCAGCACCGCATTTGGCAATG 1271 Query 1061 ATAAGACGTTCCAGAATGCGCTAAATTCTTCGTTTGAGTATTTCGTCAACTTGAACACAC 1120 |||| || || ||||||||||| |||||||| |||||||||||| |||||||||| | | Sbjct 1272 ATAAAACCTTTCAGAATGCGCTGAATTCTTCATTTGAGTATTTCATCAACTTGAATGCTC 1331 Query 1121 GTTCTCCTGAGTTTATCTCCCTGTTTGTTGATGATAAGCTACGAAAAGGACTAAAAGGTG 1180 ||||||||||||| ||||| |||||||||||||| |||||||| |||||||| || ||| Sbjct 1332 GTTCTCCTGAGTTCATCTCACTGTTTGTTGATGACAAGCTACGGAAAGGACTTAAGGGTA 1391 Query 1181 TGGGAGAGGAGGATGTCGATCTTATTCTTGATAAGGTGATGATGTTGTTTCGCTACTTAC 1240 | | || | |||||| || |||| |||||||| || |||||| |||| || || |||| Sbjct 1392 TCGCCGATGTGGATGTGGAGGTTATCCTTGATAAAGTTATGATGCTGTTCCGTTATTTAC 1451 Query 1241 AGGAGAAAGACGTTTTTGAGAAATATTACAAACAGCATCTGGCGAAAAGGCTTTTATCTG 1300 | |||||||| || |||||||| || ||||| |||||| |||| ||||||||| | || | Sbjct 1452 AAGAGAAAGATGTCTTTGAGAAGTACTACAAGCAGCATTTGGCTAAAAGGCTTCTCTCAG 1511 Query 1301 GAAAAACTGTGTCGGATGATGCAGAGAGGAATCTGATAGTGAAACTGAAGACGGAATGTG 1360 | ||||||||||| ||||| |||||||||| | | ||||||||||| ||||| ||||||| Sbjct 1512 GCAAAACTGTGTCAGATGAAGCAGAGAGGAGTTTAATAGTGAAACTAAAGACAGAATGTG 1571 Query 1361 GGTATCAATTCACTTCGAAACTT-GAAGGTATGTTCACTGACATGAAGACCTCACACGAC 1419 | ||||| |||||||| ||| || ||||| ||||||||||||||||| || ||| | ||| Sbjct 1572 GCTATCAGTTCACTTC-AAAATTGGAAGGCATGTTCACTGACATGAAAACTTCAGAGGAC 1630 Query 1420 ACGCTGCTAGGATTTTATAATAGCCATCCCGAGCTTTCAGAAGGACCTACACTTGTTGTT 1479 || ||| || |||||| || || |||||||||||||||||||| |||||| ||||| Sbjct 1631 ACAATGCGCGGGTTTTATGGCAGTCACCCCGAGCTTTCAGAAGGACCAACACTTATTGTT 1690 Query 1480 CAGGTTCTCACAACCGGTTCTTGGCCCACACAGCCAACCA-TACAATGTAACCTACCTGC 1538 ||||| || ||||| ||||||||||| |||||||| || ||| ||||| || || || Sbjct 1691 CAGGTACTTACAACTGGTTCTTGGCCAACACAGCC-TGCAGTACCTTGTAATCTCCCAGC 1749 Query 1539 AGAAGTTTCTGTTCTGTGTGAGAAGTTCAGGTCATATTACCTCGGGACTCACACCGGTAG 1598 |||||||| ||||| |||||||||||| | || || ||||| ||||| ||||| ||||| Sbjct 1750 TGAAGTTTCAGTTCTCTGTGAGAAGTTCCGTTCCTACTACCTTGGGACCCACACGGGTAG 1809 Query 1599 GAGATTGTCTTGGCAAACGAATATGGGAACAGCAGATATCAAAG-CAGTGTTTGGAAAGG 1657 |||||||| |||||||| || ||||| |||||||||||||||| || | |||||||||| Sbjct 1810 AAGATTGTCCTGGCAAACAAACATGGGCACAGCAGATATCAAAGCCA-TCTTTGGAAAGG 1868 Query 1658 GTCAGAAGCATGAACTAAACGTTTCGACTTTCCAAATGTGTGTCCTTATGTTGTTCAACA 1717 ||||||| |||||||| || || ||||||||||| |||||||| || ||||||||||||| Sbjct 1869 GTCAGAAACATGAACTGAATGTGTCGACTTTCCAGATGTGTGTTCTCATGTTGTTCAACA 1928 Query 1718 ACTCTGATCGACTAAGCTACAAAGAGATCGAACAGGCAACTGAAATCCCCACCCCAGA-C 1776 ||||||||||||| ||||||||||| ||||||||||| ||||||||||| | |||| | Sbjct 1929 ACTCTGATCGACTCAGCTACAAAGAAATCGAACAGGCTACTGAAATCCCGGCAGCAGATC 1988 Query 1777 CTAAAGCGTTGCTTGCAGTCAATGGCGTGTGTAAAAGGTAAAAACGTGCT-AAGAAAAGA 1835 |||| || || |||||||| | ||||||||||| || ||||||||| | ||| ||||| Sbjct 1989 TTAAA-CGCTGTTTGCAGTCGCTAGCGTGTGTAAAGGGCAAAAACGTGATAAAG-AAAGA 2046 Query 1836 ACCAATGAGCAAGGAGATAGCAGAGGAGGACTGGTTTGTTGTGAACGACAGGTTCGCAAG 1895 ||| |||||||| || |||| ||||||||| | ||||||||||||||||| ||| | || Sbjct 2047 ACCCATGAGCAAAGACATAGGAGAGGAGGATTCGTTTGTTGTGAACGACAAATTCACCAG 2106 Query 1896 CAAGTTCTACAAAGTGAAGATAGGAACTGTGGTGGCACAAAAGgagacagaaccagagaa 1955 |||||| |||||||||||||| ||||| ||||| || ||||| ||||||||||| ||||| Sbjct 2107 CAAGTTTTACAAAGTGAAGATCGGAACCGTGGTAGCCCAAAAAGAGACAGAACCGGAGAA 2166 Query 1956 gcaagagacaagacagagagtagaagaagacagaaAACCTCAGATCGAAGCAGCCATCGT 2015 ||||||||| ||||||||||| || |||||||||||||||||||| ||||||||||| || Sbjct 2167 GCAAGAGACGAGACAGAGAGTGGAGGAAGACAGAAAACCTCAGATTGAAGCAGCCATTGT 2226 Query 2016 GAGGATAATGAAGTCTAGACGAGTGTTGGATCACAACAACATAATCGCAGAGGTCACCAA 2075 ||||| |||||||| ||| | | | || ||||||||||||||||||||||| || || Sbjct 2227 TAGGATCATGAAGTCCAGAAAAATACTAGACCACAACAACATAATCGCAGAGGTGACGAA 2286 Query 2076 ACAGTTGCAGACGCGGTTCTTGGC-AAACCCAACAGAGATAAAGAAGAGAATTGAATCAC 2134 |||||||||| | |||||| |||| || ||| |||||||||||||||||||| || || | Sbjct 2287 ACAGTTGCAGCCACGGTTCCTGGCTAATCCC-ACAGAGATAAAGAAGAGAATCGAGTCGC 2345 Query 2135 TCATTGAGCGTGATTTCTTGGAGAGGGATAATACAGACCGGAAACTTTACCGCTATCTAG 2194 ||||||| || ||||||||||| || |||| ||||||||||||||||||||||||||||| Sbjct 2346 TCATTGAACGAGATTTCTTGGAAAGAGATAGTACAGACCGGAAACTTTACCGCTATCTAG 2405 Query 2195 CGTAAAAAAGT 2205 | |||| |||| Sbjct 2406 CCTAAATAAGT 2416 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 88026556195 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5