BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G69990.1
Length=1776
Score E
Sequences producing significant alignments: (Bits) Value
Ahg926301 jgi|Araly1|926301|scaffold_201862.1 2573 0.0
Ahg921505 jgi|Araly1|921505|scaffold_102786.1 1116 0.0
Ahg480045 jgi|Araly1|480045|fgenesh2_kg.3__2746__AT1G27190.1 377 1e-103
> Ahg926301 jgi|Araly1|926301|scaffold_201862.1
Length=1837
Score = 2573 bits (1393), Expect = 0.0
Identities = 1668/1799 (93%), Gaps = 25/1799 (1%)
Strand=Plus/Plus
Query 1 ATGAAAACGATCTCAATCTTCTTCGTCATCATCTTAATGTCATCTTCTCACGCAGAAGAC 60
|||||||||||||||||||||||| ||||||||||||| ||||||||| || | ||||||
Sbjct 21 ATGAAAACGATCTCAATCTTCTTCTTCATCATCTTAATCTCATCTTCTTACTCCGAAGAC 80
Query 61 GATGTACTCTGTCTCAAAGGCTTTAAATCATCACTCAAAGATCCTTCAAATCAACTCAAC 120
|| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct 81 GACATACTCTGTCTCAAAGGCTTAAAATCTTCACTCAAAGATCCTTCAAATCAACTCAAC 140
Query 121 ACATGGTCTTTCCCT-A---AT--TCATCATCGTCGATTTGCAAACTCACCGGAGTTTCT 174
|| |||||||||||| | || ||||||||| ||||||||||||||||||||||||||
Sbjct 141 ACTTGGTCTTTCCCTAACTCATCATCATCATCGCCGATTTGCAAACTCACCGGAGTTTCT 200
Query 175 TGCTGGAACGCTAAAGAGAATCGAATTCTCTCTCTTCAGCTTCAATCAATGCAACTCTCT 234
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 201 TGCTGGAACGCTAAAGAGAATCGGATTCTCTCTCTTCAGCTTCAATCAATGCAACTCTCT 260
Query 235 GGTCAAATCCCTGAATCTCTTAAACTATGTCGGAGTTTACAATCTTTAGATCTTTCCTTT 294
|||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 261 GGTCAAATTCCTGAATCTCTTAAGTTATGTCGGAGTTTACAATCTTTAGATCTTTCCGAT 320
Query 295 AATGATTTCTCCGGTTTGATTCCTTCACAAATATGTTCTTGGCTTCCTTATCTTGTTACT 354
|| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |
Sbjct 321 AACGATTTCTCCGGTTTGATTCCTTCACAAATCTGTTCATGGCTTCCTTATCTTGTTAGT 380
Query 355 TTAGATCTTTCCGGTAACAAACTCTCCGGTTCGATACCGTCTCAGATCGTTGACTGTAAA 414
|||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 381 TTAGATCTCTCCGGTAACAAACTTTCCGGTTCGATACCGTCTCAGATCGTTGACTGTAAA 440
Query 415 TTCTTAAACAGCTTAGCTCTAAACCAGAACAAGTTAACCGGTTCGATTCCGTCTGAATTA 474
||||||||||| |||| ||| || | ||||| ||||||||||||||||| |||||||||
Sbjct 441 TTCTTAAACAGTTTAGTTCTTAATGACAACAAATTAACCGGTTCGATTCCTTCTGAATTA 500
Query 475 ACCCGG-TTAAACCGTCTCCAACGACTTTCTCTAGCTGATAACGATCTCTCTGGTTCGAT 533
| |||| |||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 501 A-CCGGTTTAAACCGTCTCGGGCGACTTTCTCTAGCTGATAATGATCTCTCTGGTTCGAT 559
Query 534 TCCCTCCGAGCTATCTCATTACGGAGAAGATGGTTTTCGCGGTAATGGCGGACTTTGTGG 593
|||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||
Sbjct 560 TCCCTCCGAGCTATCTCATTTCGGAGAAGACGGTTTTCGCGGTAATGGCGGACTTTGCGG 619
Query 594 TAAGCCGTTATC-CAACTGCGGTTCGTTTAACGGTAAAAACTTAACGATCATTGTAACTG 652
|||||||||| | || ||||||||||| |||||||||||||||||||||||||||| ||
Sbjct 620 TAAGCCGTTA-CAGAATTGCGGTTCGTTGAACGGTAAAAACTTAACGATCATTGTAATTG 678
Query 653 CTGGCGTTATTGGAGCTGTTGGTTCATTGTGTGTTGGATTTGGGATGTTTTGGTGGTTCT 712
|||| |||||||| |||||||| || |||||| ||||||||||||||||||||||||| |
Sbjct 679 CTGGAGTTATTGGGGCTGTTGGGTCGTTGTGTATTGGATTTGGGATGTTTTGGTGGTTTT 738
Query 713 TTATTAGAGATAGGAGGAAGATGA---ATAAC---TACGGTTATGGCGCCGGAAAATGTA 766
|||| ||||| |||||||||| || | || |||||||||||||||||||||| ||
Sbjct 739 TTATCAGAGACAGGAGGAAGAAGAGTGGTTACGGTTACGGTTATGGCGCCGGAAAATCTA 798
Query 767 AGGATGATAGTGATTGGATTGGTTTGTTGAGATCACATAAGCTTGTGCAAGTTACTCTGT 826
||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct 799 GGGATGATAGTGATTGGATTGGTTTGTTGAGATCACATAAGCTTGTTCAGGTTACTCTGT 858
Query 827 TTCAGAAACCTATTGTGAAGATCAAATTGGTTGATTTGATTGAAGCTACGAACGGTTTTG 886
||||||| || ||||||||||| || |||| |||| | |||| |||||||||| ||| |
Sbjct 859 TTCAGAAGCCAATTGTGAAGATTAAGTTGGCTGATCTAATTGTAGCTACGAACAATTTCG 918
Query 887 ATTCCGGGAATATCGTTGTTTCGTCGAGAAGTGGTGTCTCGTACAAAGCTGATTTGCCTG 946
|||| | ||||| |||||||||||||| | ||| || || |||||||||||||| ||||
Sbjct 919 ATTCAGATAATATTGTTGTTTCGTCGAGGACTGGGGTTTCTTACAAAGCTGATTTACCTG 978
Query 947 ATGGGTCTACATTGGAGGTTAAGAGGCTTAGTAGTTGTTGTGAGCTTAGTGAGAAACAGT 1006
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 979 ATGGGTCTACATTGGAGGTTAAGAGGCTTAGTAGTGGTTGTGAGCTTAGTGAGAAACAGT 1038
Query 1007 TTAGGTCTGAGATTAACAAGTTAGGTCAGATCAGGCATCCGAATTTGGTTCCGCTTCTCG 1066
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1039 TCAGGTCTGAGATTAACAAGTTAGGTCAGATCAGGCATCCGAATTTGGTTCCGCTTCTCG 1098
Query 1067 GGTTTTGCGTTGTGGAAGACGAGATATTGTTGGTGTATAAGCATATGGCTAATGGGACGT 1126
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1099 GGTTTTGCGTTGTGGAAGACGAGATATTGTTGGTGTATAAGCATATGGCTAATGGGACAT 1158
Query 1127 TGTATTCTCAGCTGCAGCAATGGGATATTGATTGGCCAACTCGGGTTAGAGTCGCTGTTG 1186
||||||||||||| |||||| |||| ||||||||||||||||| |||||| |||||||||
Sbjct 1159 TGTATTCTCAGCTTCAGCAACGGGACATTGATTGGCCAACTCGTGTTAGAATCGCTGTTG 1218
Query 1187 GAGCGGCTAGAGGGCTAGCTTGGTTGCACCATGGATGTCAACCGTTGTATATGCATCAAT 1246
||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct 1219 GAGCGGCTAGAGGGCTAGCTTGGTTGCACCATGGATGTCAACCATCGTATATGCATCAAT 1278
Query 1247 ATATCAGCTCAAATGTGATTCTTCTTGACGAAGATTTCGATGCTCGTGTTATTGATTACG 1306
| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1279 ACATTAGCTCAAATGTGATTCTTCTTGACGAAGATTTCGATGCTCGTGTTATTGATTACG 1338
Query 1307 GTTTGGGGAAGTTAGTGAGTTCTCAAGACTCTAAAGATAGCTCGTTTAGTAACGGCAAGT 1366
||||||||||||||||| |||||| || ||||||||||||||||||||||||||| |||
Sbjct 1339 GTTTGGGGAAGTTAGTGTGTTCTCGGGATTCTAAAGATAGCTCGTTTAGTAACGGCGAGT 1398
Query 1367 T-------T-GG-TTACGTTGCGCCTGAGTATTCGAGCACTATGGTTGCGTCTTTGAGTG 1417
| | || |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1399 TAGGGGAGTTGGGTTACGTTGCGCCTGAGTATTCGAGCATTATGGTTGCGTCTTTGAGTG 1458
Query 1418 GAGATGTGTATGGGTTTGGGATTGTGCTTCTTGAGATTGTTACAGGACAAAAGCCTGTTT 1477
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1459 GAGATGTGTATGGGTTTGGGATTGTACTTCTTGAGATTGTTACAGGACAAAAGCCTGTTT 1518
Query 1478 TGATTAACAACGGTGAAGAAGGGTTTAAGGAGAGTTTAGTGGAGTGGGTGAGTAAGCATT 1537
|||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1519 CGATTAACATCGGCGAAGAAGGGTTTAAGGAGAGTTTAGTGGAGTGGGTGAGTAAGCATT 1578
Query 1538 TGAGTAATGGTAGAAGCAAAGATGCTATTGATAGAAGGATTTTTGGTAAAGGATATGATG 1597
||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||
Sbjct 1579 TGAGTAATGGTAGAAGCAAAGATGCTATTGATAGAAGCATTTGTGGTAAAGGATATGATG 1638
Query 1598 ATGAGATAATGCAAGTTTTGAGAATTGCGTGTAGTTGCGTTGTATCGAGGCCTAAAGAAA 1657
|||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct 1639 ATGAGATAGTGCAAGTTTTGAGAATCGCGTGTAGCTGCGTTGTATCGAGGCCTAAAGAAA 1698
Query 1658 GACCGTTGATGATCCAAGTTTATGAATCTTTGAAGAATTTGGGAGATCAACATGGTTTCT 1717
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1699 GACCGTTGATGATCCAAGTTTATGAATCTTTAAAGAATTTGGGAGATCAACATGGTTTCT 1758
Query 1718 TCTCTGAGTATAGCGATGAGTTTCCACTCATCTTTAACAAACAAGAACACTTAAAATGA 1776
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1759 TCTCTGAGTATAGCGATGAGTTTCCACTCATCTTTAACAAACAAGAACACTTAAAATGA 1817
> Ahg921505 jgi|Araly1|921505|scaffold_102786.1
Length=1852
Score = 1116 bits (604), Expect = 0.0
Identities = 1406/1782 (79%), Gaps = 100/1782 (6%)
Strand=Plus/Plus
Query 43 TCTTC-TCACGCAGAAGACGATGTACTCTGTCTCAAAGGCTTT--AAATCATCACTCAAA 99
||||| ||| || |||||||| || || |||||| |||| ||| ||| | |||||||
Sbjct 81 TCTTCTTCA-GCTGAAGACGACGTTCTTTGTCTCCAAGG-TTTGAAAAAC-TCACTCATC 137
Query 100 GATCCTTCAAATC-A-ACTCAACACATGGTCTTTCCCTAA---TTCATCATCGTCGATTT 154
|||||||| || | ||||| | ||||||||||| || |||| | || |||||||
Sbjct 138 GATCCTTC--TTCTAGACTCAGTTCCTGGTCTTTCCCAAACTCTTCAGCTTCTTCGATTT 195
Query 155 GCAAACTCACCGGAGTTTCTTGCTGGAACGCTAAAGAGAATCGAATTCTCTCTCTTCAGC 214
| || ||||| || ||||| |||||||||| ||||||||||| ||| | ||||||||||
Sbjct 196 GTAAGCTCACTGGTGTTTCCTGCTGGAACGAGAAAGAGAATCGGATTATTTCTCTTCAGC 255
Query 215 TTCAATCAATGCAACTCTCTGGTCAAATCCCTGAATCTCTTAAACTATGTCGGAGTTTAC 274
||||||| ||||| ||| | ||| | || ||||| |||||||| || ||||| |||||||
Sbjct 256 TTCAATCGATGCAGCTCGCCGGTGAGATTCCTGAGTCTCTTAAGCTTTGTCGTAGTTTAC 315
Query 275 AATCTTTAGATCTTTCCT-TTAATGATTTCTCCGGTTTGATTCCTTCACAAATATGTTCT 333
||||| | ||||| | || || ||| |||| |||| ||||||||| ||||| ||||||
Sbjct 316 AATCTCTGGATCTCT-CTGGAAACGATCTCTCTGGTTCGATTCCTTCTCAAATCTGTTCT 374
Query 334 TGGCTTCCTTATCTTGTTACTTTAGATCTTTCCGGTAACAAACTCT-CCGGTTCGATACC 392
|||||||||||||| ||||| |||||||| || || || || || | |||||||| ||
Sbjct 375 TGGCTTCCTTATCTAGTTACGTTAGATCTATCTGGGAATAAGCT-TGGTGGTTCGATTCC 433
Query 393 GT-CTCAGATCGTTGACTGTAAATTCTTAAACAGCTTAG-CTCTAAACCAGAACAAG-TT 449
| ||||||||||||| ||||| ||||||||| |||| | | | | | || ||| ||
Sbjct 434 -TACTCAGATCGTTGAGTGTAAGTTCTTAAAC-GCTTTGATTTTGAGTGATAATAAGCTT 491
Query 450 AACCGGTTCGATTCCGTCTGAATTAACCCGGTTAAACCGTCTCCAACGACTTTCTCTAGC 509
| ||||||||||| ||| | || | || ||| | || || | ||| |||||||| ||
Sbjct 492 -TCTGGTTCGATTCCTTCTCAGTTGAGTCGATTAGATCGGCTTCGACGTCTTTCTCTTGC 550
Query 510 TGATAACGATCTCTCTGGTTCGATTCCCTCCGAGCTATCTC-ATTACGGAGAAGATGGTT 568
|| ||| |||||||| ||| ||||||| || ||||| | | || ||||| ||| | ||
Sbjct 551 TGGTAATGATCTCTCCGGTACGATTCCGTCTGAGCTGGCGCGGTT-CGGAGGAGACGATT 609
Query 569 TTCGCGGTAATGGCGGACTTTGTGGTAAGCCGTTATCCA-ACTGCGGTTCGTTTAACGGT 627
|| |||| |||| ||||||||| || ||||||||||| | | || || |||| || ||
Sbjct 610 TTAGCGGGAATGACGGACTTTGCGGGAAGCCGTTATCGAGA-TGTGGAGCGTTGAATGGG 668
Query 628 A-AAAACTTAACG-ATCATTGTAACTGCTGGCGTTATTGGAGCTGTTGGTTCATTGTGTG 685
| ||| | | | | || ||| || |||||| ||||||||||||||||| || |||||||
Sbjct 669 AGAAATC-TGA-GTATTATTATAGTTGCTGGAGTTATTGGAGCTGTTGGATCTTTGTGTG 726
Query 686 TTGGATTT-GGGATGTTTTGGTGGTTCTTTATTAGAGATAGG-AGGAAGATGAATAACTA 743
|||| ||| | ||| ||||||||||||||||||||||| ||| || | || ||| || |
Sbjct 727 TTGG-TTTAGTGATATTTTGGTGGTTCTTTATTAGAGA-AGGTAGTAGGAAGAAGAA--A 782
Query 744 CGGTTATGGCGCCGGAAAATGTAAGGATGATAGTGATTGGATTGGTTTGTTGAGATCACA 803
|||||||| || || || | ||||||||||||||||||||||||||||||||| |||||
Sbjct 783 -GGTTATGGTGCTGGGAAGTCTAAGGATGATAGTGATTGGATTGGTTTGTTGAGGTCACA 841
Query 804 TAAGCTTGTGCAAGTTACTCTGTTTCAGAAACCTATTGTGAAGATCAAATTGGTTGATTT 863
||||||||| || || ||| ||||||||||||||||||||||||| ||||||| ||||||
Sbjct 842 TAAGCTTGTTCAGGTGACTTTGTTTCAGAAACCTATTGTGAAGATTAAATTGGGTGATTT 901
Query 864 GATTGAAGCTACGAACGGTTTT-GATTCCGGGAATATCGTTGTTTCGTCGAGAAGTGGTG 922
|| | |||||||| |||| | ||| |||||||||| |||||||||||| | ||| |
Sbjct 902 AATGGCTGCTACGAATAATTTTAG-TTCAGGGAATATCGATGTTTCGTCGAGGACTGGGG 960
Query 923 TCTCGTACAAAGCTGATTTGCCTGATGGGTCTACA-TTGGAGGTTAAGAGGCTTAGTAG- 980
| ||||| ||||| ||||| |||||||| ||| | ||| ||| ||||||||||| |
Sbjct 961 TTTCGTATAAAGCGGATTTACCTGATGGCTCTGCGCTTGC-GGTGAAGAGGCTTAGC-GC 1018
Query 981 TTGTTGTGAGCTTAGTGAGAAACAGTTTAGGTCTGAGATTAACAAGTTAGGTCAGATCAG 1040
|||| | | | || ||||||||||||| ||||| ||||| || | |||||| || | ||
Sbjct 1019 TTGT-G-G-GTTTGGTGAGAAACAGTTCAGGTCGGAGATGAATAGGTTAGGAGAGCTTAG 1075
Query 1041 GCATCCGAATTTGGTTCCGCTTCTCGGGTT-TTGCGTTGTGGAAGACGAGATATTGTTGG 1099
|||||||||||||| |||||| | || || ||| ||||||||||| |||| | ||||||
Sbjct 1076 ACATCCGAATTTGGTGCCGCTTTTAGG-TTATTGTGTTGTGGAAGATGAGAGACTGTTGG 1134
Query 1100 TGTATAAGCATATGGCTAATGGGACGTTGTATTCTCAGCTGCAGCAATGG-G-AT----- 1152
|||||||||||||| ||||||| ||||||| ||||||| |||| |||||| | ||
Sbjct 1135 TGTATAAGCATATGCCTAATGGCACGTTGTTTTCTCAGTTGCA-CAATGGTGGATTGTGT 1193
Query 1153 -AT--TG------ATTGGCCAACTCGGGTTA-GAGTCGCTGTTGGAGCGGCTAGAGGGCT 1202
|| || ||||||| |||||| || || | | ||| ||||| |||| |||| |
Sbjct 1194 GATGCTGTTTTGGATTGGCCTACTCGGCTTGCGATTGG-TGTGGGAGCTGCTAAAGGGTT 1252
Query 1203 AGCTTGGTTGCACCATGGATGTCAACCGTTGTATATGCATCAATAT-ATCAGCTCAAATG 1261
||||||| |||| |||||||||||||| |||| ||||||| | | || ||||| ||||
Sbjct 1253 AGCTTGGCTGCATCATGGATGTCAACCACCGTATTTGCATCAGT-TCATTAGCTCCAATG 1311
Query 1262 TGATTCTTCTTGACGAAGATTTCGATGCTCGTGTTATT-GATTACGGTTTGGGGAAGT-T 1319
| || |||||||| || ||||| |||||||| | || ||||||||||||| ||| |
Sbjct 1312 TTATACTTCTTGATGATGATTTTGATGCTCG-GATAACCGATTACGGTTTGGC-AAGGCT 1369
Query 1320 AGT-GAGTTCTCAAGACTCTAAAGATAGCTCGTTTAGTAACGGC-A--------AGTTTG 1369
||| | | |||| || || || ||||||||||| | ||| || | |||| |
Sbjct 1370 AGTTG-GATCTCGTGATTCGAACGATAGCTCGTTCAATAATGGGGATTTGGGGGAGTTAG 1428
Query 1370 GTTACGTTGCGCCTGAGTATTCGAGCACTATGGTTGCGTCTTTGAGTGGAGATGTGTATG 1429
|||| || |||||||||||||||||||| |||||||| ||||||| |||||||||||||
Sbjct 1429 GTTATGTGGCGCCTGAGTATTCGAGCACCATGGTTGCATCTTTGAAAGGAGATGTGTATG 1488
Query 1430 GGTTTGGGATTGTGCTTCTTGAGATTG-TTACAGGACAAAAGCCTGTT-T-TGATTAACA 1486
|||||||||||||||||||||| |||| ||||||| ||||||||| || | || ||| |
Sbjct 1489 GGTTTGGGATTGTGCTTCTTGA-ATTGGTTACAGGGCAAAAGCCT-TTGTCTG-TTATTA 1545
Query 1487 ACGGTGAAGAAGGGTTTAA-GGAGAGTTTAGTGGAGTGGGTGAGTAAGCATTTGAGTAAT 1545
|||||| ||||||||||| || ||||||||| || ||||||||| || ||||| | | |
Sbjct 1546 ACGGTGTGGAAGGGTTTAAAGG-GAGTTTAGTTGACTGGGTGAGTCAGTATTTGGGGACT 1604
Query 1546 GGTAGAAGCAAAGATGCTATTGATAGAAGGATTTTTGGTAAAGGATATGATGATGAGATA 1605
|||||||| ||||| |||||||||||||| || | || ||||||| | ||||| ||||||
Sbjct 1605 GGTAGAAGTAAAGACGCTATTGATAGAAGCATATGTGATAAAGGACACGATGAGGAGATA 1664
Query 1606 ATGCAAGTT-TTGAGAATTGCGTGTAGTTGCGTTGTATCGAGGCCTAAAGAAAGACCGTT 1664
|||| ||| |||| ||| || ||||| || ||||| || |||||||||||||| ||
Sbjct 1665 TTGCA-GTTCTTGAAAATCGCATGTAGCTGTGTTGTGTCCAGGCCTAAAGAAAGGCCAAC 1723
Query 1665 GATGATCCAAGTTTATGAATCTTTGAAGAATTTGGGAGATCAACATGGTTTCTTCTCTGA 1724
|||||| || || |||||||||||||||| ||| |||| |||| ||| | |||| ||
Sbjct 1724 GATGATTCAGGTGTATGAATCTTTGAAGAGCATGGCAGATAAACACGGTGT-TTCT--GA 1780
Query 1725 GTAT-AGCGATGAGTTTCCACTCATCTTTAACAAACAAGAAC 1765
| || | |||||| |||||||| |||| |||||||||||||
Sbjct 1781 GCATTA-CGATGAATTTCCACTGGTCTTCAACAAACAAGAAC 1821
> Ahg480045 jgi|Araly1|480045|fgenesh2_kg.3__2746__AT1G27190.1
Length=1937
Score = 377 bits (204), Expect = 1e-103
Identities = 461/582 (79%), Gaps = 29/582 (5%)
Strand=Plus/Plus
Query 495 ACGACTTTCTCTAGCTGATAACGATCTCTCTGGTTCGATTCCCTCCGAGCT--ATC--T- 549
||| |||||||| |||| || |||||||| ||| ||||||| |||||||| | |
Sbjct 619 ACGTCTTTCTCTTGCTGGGAATGATCTCTCCGGTGCGATTCCTTCCGAGCTGGCGCGGTG 678
Query 550 CATTACGGAGAAGATGGTTTTCGCGGTAATGGCGGACTTTGTGGTAAGCCGTTATCCA-A 608
||| ||||| ||| | |||| |||| ||| ||||||||| || ||||| ||||| | |
Sbjct 679 GATT-CGGAGGAGACGATTTTAGCGGGAATAACGGACTTTGCGGGAAGCCTTTATCGAGA 737
Query 609 CTGCGGTTCGTTTAACGGTAAAAACTTAACG-ATCATTGTAACTGCTGGCGTTATTGGAG 667
|| ||| |||| || || | ||| || | | || ||| | ||||||| |||||||| |
Sbjct 738 -TGTGGTGCGTTGAATGGGAGAAATTTGA-GTATTATTATTGCTGCTGGAGTTATTGGTG 795
Query 668 CT-GTTGGTTCATTGTGTGTTGGATTT-GGGATGTTTTGGTGGTTCTTTATTAGAGATAG 725
| ||||| || ||||||||||| ||| | ||| ||||||||||||||||||||||| ||
Sbjct 796 -TCGTTGGATCTTTGTGTGTTGG-TTTAGTGATATTTTGGTGGTTCTTTATTAGAGA-AG 852
Query 726 G-AGGAAGATGAATAACTACGGTTATGGCGCCGGAAAATGTAAGGATGATAGTGATTGGA 784
| || | || ||| || | |||||||| || || || | ||||||||||||||||||||
Sbjct 853 GTAGTAGGAAGAAGAA--A-GGTTATGGTGCTGGGAAGTCTAAGGATGATAGTGATTGGA 909
Query 785 TTGGTTTGTTGAGATCACATAAGCTTGTGCAAGTTACTCTGTTTCAGAAACCTATTGTGA 844
||||||||||||| |||||||||||||| || || ||| |||||||||| || |||||||
Sbjct 910 TTGGTTTGTTGAGGTCACATAAGCTTGTTCAGGTGACTTTGTTTCAGAAGCCCATTGTGA 969
Query 845 AGATCAAATTGGTTGATTTGATTGAAGCTACGAACGGTTTT-GATTCCGGGAATATCGTT 903
|||| ||||||| |||||| || | |||||||| |||| | ||| |||||||||| |
Sbjct 970 AGATTAAATTGGGTGATTTAATGGCTGCTACGAATAATTTTAG-TTCAGGGAATATCGAT 1028
Query 904 GTTTCGTCGAGAAGTGGTGTCTCGTACAAAGCTGATTTGCCTGATGGGTCTACA-TTGGA 962
||||||||||| | ||| || ||||| ||||| ||||| |||||||||||| | |||
Sbjct 1029 GTTTCGTCGAGGACTGGGGTTTCGTATAAAGCGGATTTACCTGATGGGTCTGCGCTTGC- 1087
Query 963 GGTTAAGAGGCTTAGTAG-TTGTTGTGAGCTTAGTGAGAAACAGTTTAGGTCTGAGATTA 1021
||| ||||||||||| | |||| | | | || ||||||||||||| ||||| ||||| |
Sbjct 1088 GGTGAAGAGGCTTAGC-GCTTGT-G-G-GTTTGGTGAGAAACAGTTCAGGTCGGAGATGA 1143
Query 1022 ACAAGTTAGGTCAGATCAGGCATCCGAATTT-GGTTCCGCTT 1062
| | |||||| || | || ||||||||||| ||| ||||||
Sbjct 1144 ATAGGTTAGGAGAGCTTAGACATCCGAATTTTGGTGCCGCTT 1185
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 66657928750
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5