BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G70890.1
Length=818
Score E
Sequences producing significant alignments: (Bits) Value
Ahg476224 jgi|Araly1|476224|fgenesh2_kg.2__1354__AT1G70890.1 843 0.0
Ahg908681 jgi|Araly1|908681|Al_scaffold_0002_1762 460 5e-129
Ahg926418 jgi|Araly1|926418|scaffold_201979.1 455 2e-127
Ahg926415 jgi|Araly1|926415|scaffold_201976.1 455 2e-127
Ahg918683 jgi|Araly1|918683|Al_scaffold_0173_1 442 2e-123
Ahg926422 jgi|Araly1|926422|scaffold_201983.1 416 1e-115
Ahg497302 jgi|Araly1|497302|fgenesh2_kg.173__2__AT1G70850.3 385 3e-106
Ahg476218 jgi|Araly1|476218|fgenesh2_kg.2__1348__AT1G70840.1 326 2e-88
Ahg497301 jgi|Araly1|497301|fgenesh2_kg.173__1__AT1G70840.1 276 2e-73
> Ahg476224 jgi|Araly1|476224|fgenesh2_kg.2__1354__AT1G70890.1
Length=668
Score = 843 bits (456), Expect = 0.0
Identities = 536/574 (93%), Gaps = 8/574 (1%)
Strand=Plus/Plus
Query 1 ACACTCATCTCCTAAATTCCTTACATAATATTTTCTTAAGATAAGCaaaaaaaTCATGGC 60
|||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct 1 ACACTCATCTCCTAAATTCCTTACCTAATATTTTCTTAAGATAAGC-GAAAAATCATGGC 59
Query 61 AGAAGCGTCTAGTTTGGTGGGGAAACTTGAGACAGAAGTGGAGATCAAAGCTTCGGCCAA 120
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 60 AGAAGCGTCTAGTTTGGTGGGGAAACTTGAGACCGAAGTGGAGATCAAAGCTTCGGCTGG 119
Query 121 AAAGTTCCATCACATGTTTACCGAGAGACCACACCATGTCTCCAAAGCAACTCCAGATAA 180
|||||| |||||||||||| ||| ||||||||||| ||||||||||||||||||||||||
Sbjct 120 AAAGTTTCATCACATGTTTGCCG-GAGACCACACCGTGTCTCCAAAGCAACTCCAGATAA 178
Query 181 AATTCATGGATGTGAGCTGCACGAAGGCGACTGGGGCAAAGTCGGCTCTATCGTCATCTG 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 179 AATTCATGGATGTGAGCTGCACGAAGGCGACTGGGGCAAAGTCGGCTCTATCGTCATCTG 238
Query 241 GAAATACGTTCATG--A--TGGAAAGTTAACAGTGGGGAAGAATAAGATCGAGGCGGTGG 296
|||||||||||||| | ||||||| || |||||| |||| ||| | ||||||||||||
Sbjct 239 GAAATACGTTCATGGCAAATGGAAAGGTATCAGTGGCGAAGGATAGGGTCGAGGCGGTGG 298
Query 297 ATCCGGAGAAGAACCTGATCACGTTCAAGGTTTTAGAAGGTGATCTGATGAATGAGTACA 356
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 299 ATCCGGAGAAGAACCTGATCACGTTCAAGGTTTTAGAAGGTGATCTGATGAAAGAGTATA 358
Query 357 AGAGCTTCGCATTTACACTCCAAGTGACCCCTAAGCAAGG-GGAGTCAGGGAGTATTGCG 415
||||||||||||| ||| |||||||||||||||||||||| || | |||||||||||| |
Sbjct 359 AGAGCTTCGCATTCACAATCCAAGTGACCCCTAAGCAAGGAGG-GCCAGGGAGTATTGTG 417
Query 416 CACTGGCACCTGGAGTATGAGAAAATTAGCGAGGAGGTAGCTCATCCCGAAACCCTTCTC 475
||||||||||| || ||||||||||||||||||||||| |||||||||||||| || |||
Sbjct 418 CACTGGCACCTTGACTATGAGAAAATTAGCGAGGAGGTGGCTCATCCCGAAACTCTCCTC 477
Query 476 CAATTCTGTGTCGAGATCTCCAAAGAGATCGACGAACATCTCTTGGCCGAGGAATAGAAA 535
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 478 CAATTCTTTGTCGAGATCTCCAAAGAGATCGACGAACATCTCTTGGCCGAGGAATAGAAA 537
Query 536 AATACTCCTCGTCTGTGTGTGGGTCTTTGAAACT 569
| |||||||||| |||||||| ||||||||||||
Sbjct 538 ATTACTCCTCGTATGTGTGTGTGTCTTTGAAACT 571
Score = 82.4 bits (44), Expect = 5e-15
Identities = 52/56 (93%), Gaps = 0/56 (0%)
Strand=Plus/Plus
Query 644 TGTGTTGGTGTGTGTAATGCGTGTATGCCTACTACTACGGTTGAGTTATGTTGGAA 699
||||||||||||||| ||| |||||||| ||||||||||||||||||||||| |||
Sbjct 613 TGTGTTGGTGTGTGTCATGTGTGTATGCGTACTACTACGGTTGAGTTATGTTTGAA 668
> Ahg908681 jgi|Araly1|908681|Al_scaffold_0002_1762
Length=951
Score = 460 bits (249), Expect = 5e-129
Identities = 404/477 (85%), Gaps = 18/477 (4%)
Strand=Plus/Plus
Query 62 GAAGCGT-CTAGTTTGGTGGGGAAACTTGAGACAGAAGTGGAGATCAAAGCTTCGGCCAA 120
||||| | |||||||||| ||||| || |||||||||||||||||||||||||| ||
Sbjct 13 GAAGC-TCCTAGTTTGGTAGGGAAGCTAGAGACAGAAGTGGAGATCAAAGCTTCTGCTGG 71
Query 121 AAAGTTCCATCACATGTTTACCGAG-AGACCACACCATGTCTCCAAAGCAACTCCAGATA 179
|||||| |||||||||||| ||| | || |||||||||||||||||||||| ||||| |
Sbjct 72 AAAGTTTCATCACATGTTTGCCGGGAAG-CCACACCATGTCTCCAAAGCAAGTCCAGGCA 130
Query 180 AAATTCATG-GATGTGAGCTGCACGAAGGCGACTGGGGCAAAGTCGGCTCTATCGTCATC 238
| ||||| | | ||||| || ||||||||||||||||||| |||||||||||||||| ||
Sbjct 131 ACATTCA-GAGCTGTGATCTACACGAAGGCGACTGGGGCACAGTCGGCTCTATCGTCTTC 189
Query 239 TGGAAATACGTTCATGATGGAAAGTTAACA-GTGGGGAAGAATAAG-ATCGAGGCGGTGG 296
||||| |||||||| ||||| || || | |||| |||| | || |||||||||||||
Sbjct 190 TGGAATTACGTTCACGATGGGGAGGCAA-AGGTGGCGAAGGA-GAGAATCGAGGCGGTGG 247
Query 297 ATCCGGAGAAGAACCTGATCACGTTCAAGGTTTTAGAAGGTGATCTGATGAATGAGTACA 356
| || ||||||||| ||||||| |||| |||| ||||||||||||| ||||| |||||||
Sbjct 248 AGCCAGAGAAGAACTTGATCACATTCAGGGTTATAGAAGGTGATCTAATGAAAGAGTACA 307
Query 357 AGAGCTTCG-CATTTAC-ACTCCAAGTGACCCCTAAGCAAGG-GGAGTCAGGGAGTATTG 413
||||||| | | | || | |||| |||||||||||||| || || ||| || |||||||
Sbjct 308 AGAGCTTTGTGA-TCACGA-TCCAGGTGACCCCTAAGCATGGAGG-GTCTGGAAGTATTG 364
Query 414 -CGCACTGGCACCTGGAGTATGAGAAAATTAGCGAGGAGGTAGCTCATCCCGAAACCCTT 472
| ||||||||||| || ||||||||||| ||||| |||||||||||||| ||||| ||
Sbjct 365 TC-CACTGGCACCTTGAATATGAGAAAATCAGCGACGAGGTAGCTCATCCTGAAACTCTC 423
Query 473 CTCCAATTCTGTGTCGAGATCTCCAAAGAGATCGACGAACATCTCTTGGCCGAGGAA 529
||||| || ||||||||| |||||||||||||||||||||||||||| ||||||||
Sbjct 424 CTCCAGTTTTGTGTCGAGGTCTCCAAAGAGATCGACGAACATCTCTTATCCGAGGAA 480
Score = 449 bits (243), Expect = 1e-125
Identities = 385/453 (85%), Gaps = 12/453 (3%)
Strand=Plus/Plus
Query 86 CTTGAGACAGAAGTGGAGATCAAAGCTTCGGC-CAAAAAGTTCCATCACATGTTTACCGA 144
||||||||||| ||||||||||||||||| || | | ||||||||||||||||| |||
Sbjct 505 CTTGAGACAGAGGTGGAGATCAAAGCTTCCGCTC-AGAAGTTCCATCACATGTTCGCCGG 563
Query 145 GAGACCACACCATGTCTCCAAAGCAACTCCAGATAAAATTCATG-GATGTGAGCTGCACG 203
|| ||||||||||||||||||||||||||||||||| ||||| | | ||||| |||||||
Sbjct 564 GAAACCACACCATGTCTCCAAAGCAACTCCAGATAAGATTCA-GAGCTGTGATCTGCACG 622
Query 204 AAGGCGACTGGGGCAAAGTCGGCTCTATCGTCATCTGGAAATACGTTCATGATGGAAAGT 263
|||| |||||||||| |||||||||| ||||| ||||||| || |||||||||| ||
Sbjct 623 AAGGTGACTGGGGCACAGTCGGCTCTGTCGTCTTCTGGAACTATATTCATGATGGGGAGG 682
Query 264 TAACAG-TGGGGAAGAATAAGATCGAGGCGGTGGATCCGGAGAAGAACCTGATCACGTTC 322
|| || ||| ||| | | |||||||||||||||||| ||||||||| |||||||||||
Sbjct 683 CAA-AGGTGGCAAAGGAGAGGATCGAGGCGGTGGATCCAGAGAAGAACTTGATCACGTTC 741
Query 323 AAGGTTTTAGAAGGTGATCTGATGAATGAGTACAAGAGCTTCGC-ATTTACACTCCAAGT 381
| |||| ||||||||||||||||||| |||||||||||||||| || ||| |||||||
Sbjct 742 AGGGTTATAGAAGGTGATCTGATGAAAGAGTACAAGAGCTTCGTGATA-ACAATCCAAGT 800
Query 382 GACCCCTAAGCAAGGGGAGT-CAGGGAGTATTGCGCACTGGCACCTGGAGTATGAGAAAA 440
||| |||||||| || | || |||||||| | | ||| |||||| | ||||| |||||||
Sbjct 801 GACTCCTAAGCATGGAG-GTTCAGGGAGTGTGGTGCATTGGCACTTCGAGTACGAGAAAA 859
Query 441 TTAGCGAGGAGGTAGCTCATCCCGAAACCCTTCTCCAATTCTGT-GTCGAGATCTCCAAA 499
| | ||||||||| |||||||| || || || ||||| || || || || |||||||||
Sbjct 860 TAAACGAGGAGGTGGCTCATCCTGAGACTCTCCTCCAGTT-TGCCGTAGAAATCTCCAAA 918
Query 500 GAGATCGACGAACATCTCTTGGCCGAGGAATAG 532
|| ||||||||||||||||||||||||||||||
Sbjct 919 GAAATCGACGAACATCTCTTGGCCGAGGAATAG 951
> Ahg926418 jgi|Araly1|926418|scaffold_201979.1
Length=526
Score = 455 bits (246), Expect = 2e-127
Identities = 397/469 (85%), Gaps = 14/469 (3%)
Strand=Plus/Plus
Query 68 TCTAGTTTGGTGGGGAAACTTGAGACAGAAGTGGAGATCAAAGCTTCGGC-CAAAAAGTT 126
||||||||||||||||| ||||||||||| ||||||||||||| ||| || |||| ||
Sbjct 39 TCTAGTTTGGTGGGGAAGCTTGAGACAGACGTGGAGATCAAAGTTTCAGCTGGAAAA-TT 97
Query 127 CCATCACATGTTTACCGAGAGACCACACCATGTCTCCAAAGCAACTCCAGATAAAATTCA 186
||| ||||||| |||| ||||||||||||||||||||||||||||| | |||||
Sbjct 98 TCATAACATGTTCGTGGAGAAACCACACCATGTCTCCAAAGCAACTCCAGGCCACATTCA 157
Query 187 TGGA-TGTGAGCTGCACGAAGGCGACTGGGGCAAAGTCGGCTCTATCGTCATCTGGAAAT 245
| | ||||| ||||| |||||||| |||||||||||||||||| ||||||||||||| |
Sbjct 158 -GAACTGTGAACTGCATGAAGGCGAATGGGGCAAAGTCGGCTCTGTCGTCATCTGGAACT 216
Query 246 ACGTTCATGATGGAAAGTTAACAG-TGGGGAAGAATAAGATCGAGGCGGTGGATCCGGAG 304
||||||||||||| | || || ||| ||| | | |||||||||| |||| ||||||
Sbjct 217 ACGTTCATGATGGGGTGGCAA-AGGTGGCAAAGGAGAGGATCGAGGCGTTGGAGCCGGAG 275
Query 305 AAGAACCTGATCACGTTCA-AGGTTTTAGAAGGTGATCTGATGAATGAGTACAAGAGCTT 363
|||||| |||||||||| | || || |||| |||||||||||||| ||||| || |||||
Sbjct 276 AAGAACTTGATCACGTTTAGAG-TTCTAGATGGTGATCTGATGAAAGAGTATAAAAGCTT 334
Query 364 CGC-ATTTACACTCCAAGTGACCCCTAAGCAAGG-GGAGTCAGGGAGTATTGCGCACTGG 421
| || ||| |||||||||||||||||||||| || | ||||||||||||||||||||
Sbjct 335 TGTGATC-ACAATCCAAGTGACCCCTAAGCAAGGAGG-GCCAGGGAGTATTGCGCACTGG 392
Query 422 CACCTGGAGTATGAGAAAATTAGCGAGGAGGTAGCTCATCCC-GAAACCCTTCTCCAATT 480
||||| |||||||||||||||||||||||||| ||||| ||| || || |||||||||||
Sbjct 393 CACCTTGAGTATGAGAAAATTAGCGAGGAGGTGGCTCA-CCCTGAGACTCTTCTCCAATT 451
Query 481 CTGTGTCGAGATCTCCAAAGAGATCGACGAACATCTCTTGGCCGAGGAA 529
||||||||| || ||||||| |||||| ||| |||||||| |||| |||
Sbjct 452 CTGTGTCGATATGTCCAAAGGGATCGATGAATATCTCTTGACCGAAGAA 500
> Ahg926415 jgi|Araly1|926415|scaffold_201976.1
Length=1048
Score = 455 bits (246), Expect = 2e-127
Identities = 399/472 (85%), Gaps = 14/472 (3%)
Strand=Plus/Plus
Query 69 CTAGTTTGGTGGGGAAACTTGAGACAGAAGTGGAGATCAAAGCTTCGGCCAAAAAGTTCC 128
|||||||||||||||| || |||||||| |||||||||||| |||| || | |||||||
Sbjct 565 CTAGTTTGGTGGGGAAGCTAGAGACAGACGTGGAGATCAAATCTTCAGCTGAGAAGTTCC 624
Query 129 ATCACATGTTTAC-CGAG-AGACCACACCATGTCTCCAAAGCAACTCCA-GATAAAATTC 185
|||||||| || | || | | |||||| |||||||| |||||| ||||| || || ||||
Sbjct 625 ATCACATG-TT-CGCGGGAAAACCACATCATGTCTCTAAAGCATCTCCAGGA-AACATTC 681
Query 186 ATGGATGTGAGCTGCACGAAGGCGACTGGGGCAAAGTCGGCTCTATCGTCATCTGGAAAT 245
| || ||||| ||||||||||||||||||||||||||||| ||||||||| | ||||| |
Sbjct 682 AAGGCTGTGATCTGCACGAAGGCGACTGGGGCAAAGTCGGTTCTATCGTCTTTTGGAACT 741
Query 246 ACGTTCATGATGGAAAGTTAACAG-TGGGGAAGAATAAGATCGAGGCGGTGGATCCGGAG 304
| ||||||||||| || || || ||| ||| | | |||||||||||| || |||||
Sbjct 742 ATGTTCATGATGGGGAGGCAA-AGGTGGCTAAGGAGAGGATCGAGGCGGTTGAGCCGGAT 800
Query 305 AAGAACCTGATCACGTTCAAGGTTTTAGAAGGTGATCTGATGAATGAGTACAAGAGCTTC 364
|||||| |||||||||| | |||| | || |||||||||||||| ||||||||||||||
Sbjct 801 AAGAACTTGATCACGTTTAGGGTTATCGACGGTGATCTGATGAAAGAGTACAAGAGCTTT 860
Query 365 GC-ATTTAC-ACTCCAAGTGACCCCTAAGCAAGG-GGAGTCAGGGAGTATTGCGCACTGG 421
| || || | |||| ||||||||||| || || || | | || ||||||| ||| |||
Sbjct 861 GTGATC-ACGA-TCCAGGTGACCCCTAAACATGGAGG-GCCTGGAAGTATTGTGCATTGG 917
Query 422 CACCTGGAGTATGAGAAAATTAGCGAGGAGGTAGCTCATCCCGAAACCCTTCTCCAATTC 481
||||| |||||||||||||||||||||||||| |||||||||||||| || |||||||||
Sbjct 918 CACCTTGAGTATGAGAAAATTAGCGAGGAGGTGGCTCATCCCGAAACTCTCCTCCAATTC 977
Query 482 TGTGTCGAGATCTCCAAAGAGATCGACGAACATCTCTTGGCCGAGGAATAGA 533
||||||||| ||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 978 TGTGTCGAGGTCTCCAAAGAGGTCGACGAACATCTATTGGCCGAGGAATAGA 1029
Score = 442 bits (239), Expect = 2e-123
Identities = 396/471 (84%), Gaps = 14/471 (3%)
Strand=Plus/Plus
Query 66 CGTCTAGTTTGGTGGGGAAACTTGAGACAGAAGTGGAGATCAAAGCTTCGGCCAAAAAGT 125
||||||||||| ||||||| || || ||||| ||||||||||| |||||||| | ||||
Sbjct 76 CGTCTAGTTTGTTGGGGAAGCTAGAAACAGACGTGGAGATCAAGGCTTCGGCTGATAAGT 135
Query 126 TCCATCACATGTTTACCGAGAGACCACACCATGTCTCCAAAGCAACTCCAGATAAAATTC 185
| ||||||||||| | | || ||||||||||||||||||||||| ||||| || ||||
Sbjct 136 TTCATCACATGTTCGCTGGGAAACCACACCATGTCTCCAAAGCAAGTCCAGGCAACATTC 195
Query 186 ATGGATGTGAGCTGCACGAAGGCGACTGGGGCAAAGTCGGCTCTATCGTCATCTGGAAAT 245
| | ||||| |||||||||||||||||||||| ||| ||||||||| || ||||||| |
Sbjct 196 AAAGCTGTGATCTGCACGAAGGCGACTGGGGCACAGTTGGCTCTATCATCTTCTGGAACT 255
Query 246 ACGTTCATGATGGAAAGTTAACA-GTGGGGAAGAATAAG-ATCGAGGCGGTGGATCCGGA 303
||||||||||||| || || | |||| ||| | || |||||||||||||| |||||
Sbjct 256 ACGTTCATGATGGGGAGGCAA-AGGTGGCTAAGGA-GAGAATCGAGGCGGTGGAGCCGGA 313
Query 304 GAAGAACCTGATCACGTTCAAGGTTTTAGAAGGTGATCTGATGAATGAGTACAAGAGCTT 363
||||||| |||||||||| | |||| |||| |||||||||||||| ||||||||||||||
Sbjct 314 GAAGAACTTGATCACGTTTAGGGTTATAGACGGTGATCTGATGAAAGAGTACAAGAGCTT 373
Query 364 C--GCATTTAC-ACTCCAAGTGACCCCTAAGCAAGG-GGAGTCAGGGAGTATTGCGCACT 419
| || | || | |||| |||||||| |||| || || | | || ||||||| ||| |
Sbjct 374 CTTGC--TCACGA-TCCAGGTGACCCCCAAGCCTGGCGG-GCCTGGAAGTATTGTGCATT 429
Query 420 GGCACCTGGAGTATGAGAAAATTAGCGAGGAGGTAGCTCATCCCGAAACCCTTCTCCAAT 479
||||||| ||||||||||| |||||||| ||||||||||||||||| || ||||| ||||
Sbjct 430 GGCACCTTGAGTATGAGAAGATTAGCGACGAGGTAGCTCATCCCGAGACTCTTCTTCAAT 489
Query 480 TCTGTGTCG-AGATCTCCAAAGAGATCGACGAACATCTCTTGGCCGAGGAA 529
||||||||| || | ||||||||||||||||||||||||||||| ||||||
Sbjct 490 TCTGTGTCGAAG-TGTCCAAAGAGATCGACGAACATCTCTTGGCTGAGGAA 539
> Ahg918683 jgi|Araly1|918683|Al_scaffold_0173_1
Length=768
Score = 442 bits (239), Expect = 2e-123
Identities = 396/471 (84%), Gaps = 14/471 (3%)
Strand=Plus/Plus
Query 66 CGTCTAGTTTGGTGGGGAAACTTGAGACAGAAGTGGAGATCAAAGCTTCGGCCAAAAAGT 125
||||||||||| ||||||| || || ||||| ||||||||||| |||||||| | ||||
Sbjct 56 CGTCTAGTTTGTTGGGGAAGCTAGAAACAGACGTGGAGATCAAGGCTTCGGCTGATAAGT 115
Query 126 TCCATCACATGTTTACCGAGAGACCACACCATGTCTCCAAAGCAACTCCAGATAAAATTC 185
| ||||||||||| | | || ||||||||||||||||||||||| ||||| || ||||
Sbjct 116 TTCATCACATGTTCGCTGGGAAACCACACCATGTCTCCAAAGCAAGTCCAGGCAACATTC 175
Query 186 ATGGATGTGAGCTGCACGAAGGCGACTGGGGCAAAGTCGGCTCTATCGTCATCTGGAAAT 245
| | ||||| |||||||||||||||||||||| ||| ||||||||| || ||||||| |
Sbjct 176 AAAGCTGTGATCTGCACGAAGGCGACTGGGGCACAGTTGGCTCTATCATCTTCTGGAACT 235
Query 246 ACGTTCATGATGGAAAGTTAACA-GTGGGGAAGAATAAG-ATCGAGGCGGTGGATCCGGA 303
||||||||||||| || || | |||| ||| | || |||||||||||||| |||||
Sbjct 236 ACGTTCATGATGGGGAGGCAA-AGGTGGCTAAGGA-GAGAATCGAGGCGGTGGAGCCGGA 293
Query 304 GAAGAACCTGATCACGTTCAAGGTTTTAGAAGGTGATCTGATGAATGAGTACAAGAGCTT 363
||||||| |||||||||| | |||| |||| |||||||||||||| ||||||||||||||
Sbjct 294 GAAGAACTTGATCACGTTTAGGGTTATAGACGGTGATCTGATGAAAGAGTACAAGAGCTT 353
Query 364 C--GCATTTAC-ACTCCAAGTGACCCCTAAGCAAGG-GGAGTCAGGGAGTATTGCGCACT 419
| || | || | |||| |||||||| |||| || || | | || ||||||| ||| |
Sbjct 354 CTTGC--TCACGA-TCCAGGTGACCCCCAAGCCTGGCGG-GCCTGGAAGTATTGTGCATT 409
Query 420 GGCACCTGGAGTATGAGAAAATTAGCGAGGAGGTAGCTCATCCCGAAACCCTTCTCCAAT 479
||||||| ||||||||||| |||||||| ||||||||||||||||| || ||||| ||||
Sbjct 410 GGCACCTTGAGTATGAGAAGATTAGCGACGAGGTAGCTCATCCCGAGACTCTTCTTCAAT 469
Query 480 TCTGTGTCG-AGATCTCCAAAGAGATCGACGAACATCTCTTGGCCGAGGAA 529
||||||||| || | ||||||||||||||||||||||||||||| ||||||
Sbjct 470 TCTGTGTCGAAG-TGTCCAAAGAGATCGACGAACATCTCTTGGCTGAGGAA 519
Score = 195 bits (105), Expect = 6e-49
Identities = 162/189 (86%), Gaps = 6/189 (3%)
Strand=Plus/Plus
Query 69 CTAGTTTGGTGGGGAAACTTGAGACAGAAGTGGAGATCAAAGCTTCGGCCAAAAAGTTCC 128
|||||||||||||||| || |||||||| |||||||||||| |||| || | |||||||
Sbjct 545 CTAGTTTGGTGGGGAAGCTAGAGACAGACGTGGAGATCAAATCTTCAGCTGAGAAGTTCC 604
Query 129 ATCACATGTTTAC-CGAG-AGACCACACCATGTCTCCAAAGCAACTCCA-GATAAAATTC 185
|||||||| || | || | | |||||| |||||||| |||||| ||||| || || ||||
Sbjct 605 ATCACATG-TT-CGCGGGAAAACCACATCATGTCTCTAAAGCATCTCCAGGA-AACATTC 661
Query 186 ATGGATGTGAGCTGCACGAAGGCGACTGGGGCAAAGTCGGCTCTATCGTCATCTGGAAAT 245
| || ||||| ||||||||||||||||||||||||||||||||||||||| | ||||| |
Sbjct 662 AAGGCTGTGATCTGCACGAAGGCGACTGGGGCAAAGTCGGCTCTATCGTCTTTTGGAACT 721
Query 246 ACGTTCATG 254
| |||||||
Sbjct 722 ATGTTCATG 730
> Ahg926422 jgi|Araly1|926422|scaffold_201983.1
Length=496
Score = 416 bits (225), Expect = 1e-115
Identities = 420/508 (83%), Gaps = 38/508 (7%)
Strand=Plus/Plus
Query 32 TTTCTTAAGATAAGCaaaaaaaTCATGGCAGAAGCGTCTAGTTTGGTGGGGAAACTTGAG 91
|||||| |||||||| |||| |||||||||||||||||||||| ||||| || ||||||
Sbjct 1 TTTCTTGAGATAAGC--AAAACTCATGGCAGAAGCGTCTAGTTTAGTGGGTAAGCTTGAG 58
Query 92 ACAGAAGTGGAGATCAAAGCTTCGGCCAAAAAGTTCCATCACATGTTTACCGAGAGACCA 151
|||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct 59 ACAGAAGTTGAGATCAAAGCTTCGGCTGGAAAGTTCCATCACATGTTTGTCGAGAGACCA 118
Query 152 CACCATGTCTCCAAAGCAACTCC-AGATAAAATTCATGGATGTGAGCTGCACGAAGGCGA 210
|||| |||||||||||||||||| || |||||||| || ||||| || |||||||| ||
Sbjct 119 CACCGTGTCTCCAAAGCAACTCCAAG-CAAAATTCAAGGCTGTGATCTACACGAAGGAGA 177
Query 211 CTGGGGCAAAGTCGGCTCTATCGTCATCTGGAAATACGTTCATGATGGAAAGTTAACAGT 270
||||||||||||||||||||||||||||||||| |||||| || ||| ||
Sbjct 178 CTGGGGCAAAGTCGGCTCTATCGTCATCTGGAACTACGTT-AT--TGG--------CA-- 224
Query 271 GGGGAAGAATAAGATCGAGGCGGTGGATCCGGAGAAGAACCTGATCACGTTCAAGGTTTT 330
| || | |||||| || || |||||||||||| ||||||||||||||||| |
Sbjct 225 ----A-GA-T-----CGAGGCAGTAGAGCCGGAGAAGAACTTGATCACGTTCAAGGTTAT 273
Query 331 AGAAGGTGATCTGATGAATGAGTACAAGAGCTTCGC-ATTTACACTCCAAGTGACCCCTA 389
|||||||||||||||||| ||||||| |||||| | || ||| |||||||||||||||
Sbjct 274 AGAAGGTGATCTGATGAAAGAGTACACGAGCTTTGTGATC-ACAATCCAAGTGACCCCTA 332
Query 390 AGCA-AGGGGAGTCAGGGAGTATTGCGCACTGGCACCTGGAGTATGAGAAAATTAGCGAG 448
|||| | ||| |||||| ||| | | |||||||||| | |||||||||||||| | ||||
Sbjct 333 AGCATAAGGG-GTCAGGAAGTGTGGTGCACTGGCACTTCGAGTATGAGAAAATGAACGAG 391
Query 449 GAGGTAGCTCATCCCGA-AACCCTTCTCCAATTCTGT-G-TCGAGATCTCCAAAGAGATC 505
||||||| |||||| || || | | ||||| || || | | || || ||||||||||||
Sbjct 392 GAGGTAGATCATCCTGAGAATC-TCCTCCAGTT-TGCCGCT-GAAATGTCCAAAGAGATC 448
Query 506 GACGAACATCTCTTGGCCGAGGAATAGA 533
|| |||||||||||| |||| |||||||
Sbjct 449 GATGAACATCTCTTGACCGAAGAATAGA 476
> Ahg497302 jgi|Araly1|497302|fgenesh2_kg.173__2__AT1G70850.3
Length=919
Score = 385 bits (208), Expect = 3e-106
Identities = 404/493 (82%), Gaps = 36/493 (7%)
Strand=Plus/Plus
Query 86 CTTGAGACAGAAGTGGAGATCAAAGCTTCGGC-CAAAAAGTTCCATCACATGTTTACCGA 144
||||||||||| ||||||||||||||||| || | | ||||||||||||||||| |||
Sbjct 268 CTTGAGACAGAGGTGGAGATCAAAGCTTCCGCTC-AGAAGTTCCATCACATGTTCGCCGG 326
Query 145 GAGACCACACCATGTCTCCAAAGCAACTCCAGATAAAATTCATG-GATGTGAGCTGCACG 203
|| ||||||||||||||||||||||||||||||||| ||||| | | ||||| |||||||
Sbjct 327 GAAACCACACCATGTCTCCAAAGCAACTCCAGATAAGATTCA-GAGCTGTGATCTGCACG 385
Query 204 AAGGCGACTGGGGCAAAGTCGGCTCTATCGTCATCTGGAAATACGTTCAT-G-ATG-GAA 260
|||| |||||||||| |||||||||| ||||| ||||||| || ||||| | | | ||
Sbjct 386 AAGGTGACTGGGGCACAGTCGGCTCTGTCGTCTTCTGGAACTATATTCATGGCAAGCCAA 445
Query 261 AG-T-TA-AC-----A-GTGG-GG--AA----G--AA-TA-A-GATCGAGGCGGTGGATC 299
| | || || | | || || || | || | | |||||||||||||||||
Sbjct 446 CGTTATATACGTGTTATGGGGAGGCAAAGGTGGCAAAGGAGAGGATCGAGGCGGTGGATC 505
Query 300 CGGAGAAGAACCTGATCACGTTCAAGGTTTTAGAAGGTGATCTGATGAATGAGTACAAGA 359
| ||||||||| |||||||||||| |||| ||||||||||||||||||| ||||||||||
Sbjct 506 CAGAGAAGAACTTGATCACGTTCAGGGTTATAGAAGGTGATCTGATGAAAGAGTACAAGA 565
Query 360 GCTTCG-CATTTACACTCCAAGTGACCCCTAAGCAAGG-GGAGTCAGGGAGTATTGCGCA 417
|||||| | | ||| |||||||||| |||||||| || || ||||||||| | | |||
Sbjct 566 GCTTCGTGA-TAACAATCCAAGTGACTCCTAAGCATGGAGG-TTCAGGGAGTGTGGTGCA 623
Query 418 CTGGCACCTGGAGTATGAGAAAATTAGCGAGGAGGTAGCTCATCCCGAAACCCTTCTCCA 477
|||||| | ||||| |||||||| | ||||||||| |||||||| || || || |||||
Sbjct 624 TTGGCACTTCGAGTACGAGAAAATAAACGAGGAGGTGGCTCATCCTGAGACTCTCCTCCA 683
Query 478 ATTCTG-TGTCGAGATCTCCAAAGAGATCGACGAACATCTCTTGGCCGAGGAATAGAA-A 535
|| || || || ||||||||||| ||||||||||||||||||||||||||||||| |
Sbjct 684 GTT-TGCCGTAGAAATCTCCAAAGAAATCGACGAACATCTCTTGGCCGAGGAATAGAGGA 742
Query 536 -AATACTCCTCGT 547
||||||||||||
Sbjct 743 GAATACTCCTCGT 755
Score = 244 bits (132), Expect = 6e-64
Identities = 211/248 (85%), Gaps = 9/248 (4%)
Strand=Plus/Plus
Query 286 CGAGGCGGTGGATCCGGAGAAGAACCTGATCACGTTCAAGGTTTTAGAAGGTGATCTGAT 345
|||||||||||| || |||||| || ||||||| |||| |||| ||||||||||||| ||
Sbjct 1 CGAGGCGGTGGAGCCAGAGAAG-ACTTGATCACATTCAGGGTTATAGAAGGTGATCTAAT 59
Query 346 GAATGAGTACAAGAGCTTCG-CATTTAC-ACTCCAAGTGACCCCTAAGCAAGG-GGAGTC 402
||| |||||||||||||| | | | || | |||| |||||||||||||| || || |||
Sbjct 60 GAAAGAGTACAAGAGCTTTGTGA-TCACGA-TCCAGGTGACCCCTAAGCATGGAGG-GTC 116
Query 403 AGGGAGTATTG-CGCACTGGCACCTGGAGTATGAGAAAATTAGCGAGGAGGTAGCTCATC 461
|| ||||||| | ||||||||||| || ||||||||||| ||||| |||||||||||||
Sbjct 117 TGGAAGTATTGTC-CACTGGCACCTTGAATATGAGAAAATCAGCGACGAGGTAGCTCATC 175
Query 462 CCGAAACCCTTCTCCAATTCTGTGTCGAGATCTCCAAAGAGATCGACGAACATCTCTTGG 521
| ||||| || ||||| || ||||||||| ||||||||||||||||||||||||||||
Sbjct 176 CTGAAACTCTCCTCCAGTTTTGTGTCGAGGTCTCCAAAGAGATCGACGAACATCTCTTAT 235
Query 522 CCGAGGAA 529
|||| |||
Sbjct 236 CCGAAGAA 243
> Ahg476218 jgi|Araly1|476218|fgenesh2_kg.2__1348__AT1G70840.1
Length=698
Score = 326 bits (176), Expect = 2e-88
Identities = 386/485 (80%), Gaps = 24/485 (5%)
Strand=Plus/Plus
Query 61 AGAAGCGTCTAGTTTGGTG-GGGAAACTTGAGACAGAAGTGGAGATCAAAGCTTCGGCCA 119
||| || || ||||| ||| ||||| || |||||||| || || ||||||||||| ||
Sbjct 51 AGAGGCCTCAAGTTT-GTGTGGGAAGCTAGAGACAGATGTTGAAATCAAAGCTTCAGCTG 109
Query 120 AAAAGTTCCATCACATGTTTACCGAGAGACCACACCATGTCTCCAAAGCAACTCCAGATA 179
|||||||||||||||||| | | |||||||||||||||||||||||||||||||| |
Sbjct 110 GGAAGTTCCATCACATGTTTGCTGGGAGACCACACCATGTCTCCAAAGCAACTCCAGGGA 169
Query 180 AAATTCATGGATGTGAGCTGCACGAAGGCGACTGGGGCAAAGTCGGCTCTATCGTCATCT 239
||||||| || |||||||| || |||||||| |||||||||||||||||||| ||| |||
Sbjct 170 AAATTCAGGGCTGTGAGCTTCATGAAGGCGAATGGGGCAAAGTCGGCTCTATAGTCTTCT 229
Query 240 GGAAATACGTTCATGATGGAAAGTTAACAG-TGGGGAAGAATA-AG-ATCGAGGCGGTGG 296
|||| || |||||||||||| || || || ||| || || | || || ||||| ||||
Sbjct 230 GGAATTATGTTCATGATGGAGAGGCAA-AGGTGGC-AA-AAGAGAGGATTGAGGCAGTGG 286
Query 297 ATCCGGAGAAGAACCTGATCACGTTCAAGGTTTTAGAAGGTGATCTGATGAAT-GAGTAC 355
| |||||||| ||||| ||||| || | ||| |||| || || || || || |||||
Sbjct 287 AGCCGGAGAAAAACCTCATCACTTTTAGGGTGATAGAGGGAGA-CTTATTAAAAGAGTAT 345
Query 356 AAGAGCTTCGC-ATTTACACTCCAAGTGACCCCTAAGCAAGGGGAGT-CA-GGGAGTATT 412
|||||||| | || ||| |||||||||| | ||| ||| |||| | |||||| |
Sbjct 346 AAGAGCTTTGTGATC-ACAATCCAAGTGACTCTTAA--AAGAGGAGGACCTGGGAGTGTG 402
Query 413 GCGCACTGGCACCTGGAGTATGAGAAAATT-AGCGAGGAGGTAGCTCATCCC-GAAACCC 470
| |||||||||| | ||||||||||||||| | ||| | || ||||| ||| || |||
Sbjct 403 GTGCACTGGCACGTCGAGTATGAGAAAATTGA-CGACAAAGTGGCTCA-CCCTGAGACC- 459
Query 471 TTC-TCCAATTCTGTGTCGA-GATCTCCAAAGAGATCGACGAACATCTCTTGGCCGAGGA 528
||| | | ||||||||| | | |||||||||||||||| ||||||||| || ||||||
Sbjct 460 TTCCTTGATTTCTGTGTCCAAG-TCTCCAAAGAGATCGATGAACATCTCCTGAACGAGGA 518
Query 529 ATAGA 533
|||||
Sbjct 519 ATAGA 523
> Ahg497301 jgi|Araly1|497301|fgenesh2_kg.173__1__AT1G70840.1
Length=630
Score = 276 bits (149), Expect = 2e-73
Identities = 363/463 (78%), Gaps = 27/463 (6%)
Strand=Plus/Plus
Query 89 GAGACAGAAGTGGAGATCAAAGCTTCGGCCAAAAAGTTCCATCACATGTTTACCGAGAGA 148
|||||||| || || ||||||||||| || |||||||||||||||||| | | ||||
Sbjct 4 GAGACAGATGTTGAAATCAAAGCTTCAGCTGGGAAGTTCCATCACATGTTTGCTGGGAGA 63
Query 149 CCACACCATGTCTCCAAAGCAACTCCAGATAAAATTCATGGATGTGAGCTGCACGAAGGC 208
|||||||||||||||||||||||||||| |||||||| || |||||||| || ||||||
Sbjct 64 CCACACCATGTCTCCAAAGCAACTCCAGGGAAAATTCAGGGCTGTGAGCTTCATGAAGGC 123
Query 209 GACTGGGGCAAAGTCGGCTCTATCGTCATCTGGAAATACGTTCATGATGGAA-AGTT--A 265
|| |||||||||||||||||||| ||| ||||||| || ||||||| || || | |
Sbjct 124 GAATGGGGCAAAGTCGGCTCTATAGTCTTCTGGAATTATGTTCATGGCAAAATAGATGGA 183
Query 266 -A--CAGTGG-GG-AAGAATA-AG-ATCGAGGCGGTGGATCCGGAGAAGAACCTGATCAC 318
| || || || || || | || || ||||| ||||| |||||||| ||||| |||||
Sbjct 184 GAGGCAAAGGTGGCAA-AAGAGAGGATTGAGGCAGTGGAGCCGGAGAAAAACCTCATCAC 242
Query 319 GTTCAAGGTTTTAGAAGGTGATCTGATGAAT-GAGTACAAGAGCTTCGC-ATTTACACTC 376
|| | ||| |||| || || || || || ||||| |||||||| | || ||| ||
Sbjct 243 TTTTAGGGTGATAGAGGGAGA-CTTATTAAAAGAGTATAAGAGCTTTGTGATC-ACAATC 300
Query 377 CAAGTGACCCCTAAGCAAGGGGAGT-CA-GGGAGTATTGCGCACTGGCACCTGGAGTATG 434
|||||||| | ||| ||| |||| | |||||| | | |||||||||| | |||||||
Sbjct 301 CAAGTGACTCTTAA--AAGAGGAGGACCTGGGAGTGTGGTGCACTGGCACGTCGAGTATG 358
Query 435 AGAAAATT-AGCGAGGAGGTAGCTCATCCC-GAAACCCTTC-TCCAATTCTGTGTCGA-G 490
|||||||| | ||| | || ||||| ||| || ||| ||| | | ||||||||| | |
Sbjct 359 AGAAAATTGA-CGACAAAGTGGCTCA-CCCTGAGACC-TTCCTTGATTTCTGTGTCCAAG 415
Query 491 ATCTCCAAAGAGATCGACGAACATCTCTTGGCCGAGGAATAGA 533
|||||||||||||||| ||||||||| || |||||||||||
Sbjct 416 -TCTCCAAAGAGATCGATGAACATCTCCTGAACGAGGAATAGA 457
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 30231473181
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5