BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G71390.1
Length=2355
Score E
Sequences producing significant alignments: (Bits) Value
Ahg476270 jgi|Araly1|476270|fgenesh2_kg.2__1400__AT1G71390.1 2254 0.0
Ahg476271 jgi|Araly1|476271|fgenesh2_kg.2__1401__AT1G71400.1 1522 0.0
Ahg497292 jgi|Araly1|497292|fgenesh2_kg.158__1__AT1G71400.1 1509 0.0
> Ahg476270 jgi|Araly1|476270|fgenesh2_kg.2__1400__AT1G71390.1
Length=2307
Score = 2254 bits (1220), Expect = 0.0
Identities = 1529/1680 (91%), Gaps = 14/1680 (1%)
Strand=Plus/Plus
Query 685 ATCTTCTTTAA-CAACTTCACATCCCTTCCTTCTGACCTGAGTGGCTTCCACAACTTGGT 743
||||||||||| ||||||||||| ||||| |||||| |||||| |||||| ||||||||
Sbjct 633 ATCTTCTTTAATAAACTTCACATCACTTCCATCTGACATGAGTGTCTTCCAAAACTTGGT 692
Query 744 GACGTTTGATATTAGTGCAAACTCATTTTCCGGGCATTTCCCTAAATTTTTGTTCTCGAT 803
||| ||||||||||||||||||||||||| ||||| | |||||| || ||| ||||||||
Sbjct 693 GACTTTTGATATTAGTGCAAACTCATTTTTCGGGCCTATCCCTACATCTTTATTCTCGAT 752
Query 804 TCCTTCGTTAGCATGGGTTTCTATGGATAGAAACCAATTCTCAGGACCTATAGAGTTTGC 863
|||||||||| ||| ||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct 753 TCCTTCGTTAACATTGGTTTATATGGATAGAAACCAATTCACAGGACCTATAGAGTTTGC 812
Query 864 TAATATATCTTCATCATCTAAGCTTCAGAATCTAATCCTCACTCGTAACAAATTAGATGG 923
|||||||||||||||||||||||||||||||||||| || |||| |||| |||||||||
Sbjct 813 TAATATATCTTCATCATCTAAGCTTCAGAATCTAATTCTTACTCATAACCGATTAGATGG 872
Query 924 CTCAATCCCTGAATCCATATCTAAGTTTCTCAACCTCGTACTGTTAGATGTTGCCCACAA 983
| ||||||||||||||||||| || ||||||||||||||| |||||||||||||||||||
Sbjct 873 CCCAATCCCTGAATCCATATCGAAATTTCTCAACCTCGTAGTGTTAGATGTTGCCCACAA 932
Query 984 TAATATCAGTGGACCAGTCCCTAGGTCTATGTCAAAGTTAGTTAGCCTCCGTATCTTTGG 1043
||||||||||||||| ||||||||||||||||||||||||||| ||||| ||| |||||
Sbjct 933 CAATATCAGTGGACCAATCCCTAGGTCTATGTCAAAGTTAGTTAACCTCCATATGTTTGG 992
Query 1044 TTTTTCCAACAACAAGTTGGAAGGTGAAGTACCAAGTTGGTTGTGGAGATTGTCTTCAAC 1103
||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |
Sbjct 993 TTTTTCCAACAACAAGTTGGAAGGTGAGGTACCAAGTTGGTTGTGGAGATTGTCGTCAGC 1052
Query 1104 AATGCTTTCTCACAATTCTTTCAGCAGTTTTGAAAAAATATATTCAAAAGAAACAATGAT 1163
||||| |||||||||||||| ||||||||||||||||||| ||||||||||||| ||||
Sbjct 1053 GATGCTGTCTCACAATTCTTTTAGCAGTTTTGAAAAAATATCTTCAAAAGAAACACTGAT 1112
Query 1164 CCAAGTGTTGGATCTAAGTTTCAATTCCTTCCGAGGGACG-TTTCCCGTTTGGATCTGCA 1222
||||||||||||||| ||||||||||| |||||||| || |||||| |||||||||||
Sbjct 1113 CCAAGTGTTGGATCTGAGTTTCAATTCATTCCGAGG-ACCATTTCCCATTTGGATCTGCG 1171
Query 1223 AGCTGAAAGGGTTACACTTCTTAGATTTGTCCAACAATCTCTTCAACGGTTCGATTCCTT 1282
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1172 AGCTGAAAGGGTTACACTTCTTAGATTTGTCCAACAATCTCTTCAACGGCTCGATTCCTT 1231
Query 1283 TATGTTTAAGGAACTTCAATCTTACGGGGCTAATTCTTGGAAACAACAAGTTCAGTGGAA 1342
||||||||||||| |||||||| ||||||||||||||||| |||||||| ||||||||||
Sbjct 1232 TATGTTTAAGGAATTTCAATCTCACGGGGCTAATTCTTGGGAACAACAACTTCAGTGGAA 1291
Query 1343 CTCTT---CCGGACATATTTGCCAATAATACCAACTTACAATCATTGGACGTAAGTGGCA 1399
||||| || || ||||| ||| | ||||||||||||||| |||||||||||| |||
Sbjct 1292 CTCTTGATCCTGATTTATTTTCCAGTGCTACCAACTTACAATCTTTGGACGTAAGTCGCA 1351
Query 1400 ACCAGTTAGAGGGGAAGTTTCCAAAGTCTTTGATAAATTGCAAAGGTTTGCATTTTGTGA 1459
||||| | || ||||||||||| ||||||||||| || ||||| || | || |||||||
Sbjct 1352 ACCAGCTCGAAGGGAAGTTTCCCAAGTCTTTGATCAACAGCAAACGTCTACAATTTGTGA 1411
Query 1460 ATGTTGAAAGCAACAAAATCAAGGATACGTTTCCATCTTGGTTGGGATCTCTACCATCTT 1519
|||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1412 ATGTGGAAAGCAACAAAATCAAGGATAAGTTTCCATCTTGGTTGGGATCTCTACCATCTT 1471
Query 1520 TACAAGTTCTCATCCTAAGATCAAACGACTTCTATGGTCCGTTGTATCATCCCAGCATGT 1579
|| ||||||||||||| |||||||||| ||||| ||||||||||||||||||| |||||
Sbjct 1472 TAAAAGTTCTCATCCTTCGATCAAACGAGTTCTACGGTCCGTTGTATCATCCCAACATGT 1531
Query 1580 CCATTGGGTTTCAAGGTTTAAGAATCATCGATATATCACACAATGGCTTCTCTGGAGTAC 1639
||||||||||||| |||||||||||||| ||||||||| ||||||||||| ||||| ||
Sbjct 1532 CCATTGGGTTTCAGGGTTTAAGAATCATTGATATATCAAACAATGGCTTCACTGGAACAC 1591
Query 1640 TCCCACCTAACtttttttCTAGTTGGCGTGAAATGATTACATTAGTCCATGGAAGTTATG 1699
|||||||| | |||||||| ||||||||||||||||||||||||||| |||||||| | |
Sbjct 1592 TCCCACCTCAGTTTTTTTCCAGTTGGCGTGAAATGATTACATTAGTCGATGGAAGTCACG 1651
Query 1700 AATACATTGAAGATATTCAGAATTATTCTCTTATCTATCGCTCCATGGAAATGGTGAATA 1759
| |||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||
Sbjct 1652 AGTACATTGAAGATATCCAGAATTTTTCTCTTATTTATCGCTCCATGGAAATGGTGAATA 1711
Query 1760 AAGGAGTAGAGATGAGTTTTGAGAGGATCCGACAAGACTTTAGAGCCATTGATTTTTCTG 1819
||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |
Sbjct 1712 AAGGAGTAGAGATGAGTTTTGAGCGGATCCGACAAGACTTCAGAGCCATTGATTTTTCGG 1771
Query 1820 AAAACAGAATTTATGGCGAAA-TACCTGAATCCATTGGTTGTTTGGAGGAACTGCGTCTT 1878
||||||| || ||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1772 AAAACAGGATATATGG-GAAAATACCTGAATCCATTGGTTGTTTGGAGGAACTGCGTCTT 1830
Query 1879 CTCAACTTGTCAGGTAACGCTTTCACAAGCGATATCCCACGGGTCTGGGAAAATCTCACA 1938
|| |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct 1831 CTTAACTTGTCAGGTAACGCTTTCACAAGCGATATCCCACGGGTCTGGGCAAATCTGACA 1890
Query 1939 AAGCTCGAGACGTTAGACCTATCACGTAACAAGTTGTCTGGTCAAATCCCACAAGATCTT 1998
||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct 1891 AAGCTCGAGACGTTAGACCTATCACGTAACAAGCTGTCAGGTCAAATCCCACAAGATCTT 1950
Query 1999 GGTAAACTCTCCTTTCTGTCGTACATGAACTTCTCCCATAACCGTCTCCAAGGTCCAGTG 2058
|||||||||| ||||| ||| |||||||||||||| ||||||| ||||||||||||||||
Sbjct 1951 GGTAAACTCTTCTTTCGGTCATACATGAACTTCTCTCATAACCTTCTCCAAGGTCCAGTG 2010
Query 2059 CCACGAGGCACACAGTTTCAAAGGCAGAGATGTTCTTCATTTTTGGACAACCATAGACTC 2118
||| ||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct 2011 CCAAGAGGCACGCAGTTTCAAAGGCAGAGATGTTCTTCATTCTTGGACAACCATGGACTC 2070
Query 2119 TACGGTCTCGAAGATATCTGTGAGGAGACTCATGTCCCGAATCCTACATCACAACCATCC 2178
|||||||||||||||||||||| ||| |||||||||||||||||||||||||| | | ||
Sbjct 2071 TACGGTCTCGAAGATATCTGTGGGGAAACTCATGTCCCGAATCCTACATCACAGCAACCC 2130
Query 2179 GAGGATTTGTTAGACGAGGAGGAAAAAATGTTCAACTGGGTAGCAGCTGCAATAGCATAT 2238
||||| |||||||| || || ||||||||||| ||||||||||||||||||||||| |||
Sbjct 2131 GAGGAGTTGTTAGAGGATGAAGAAAAAATGTTTAACTGGGTAGCAGCTGCAATAGCCTAT 2190
Query 2239 GGACCTGGTGTATTTTGTGG-TCTGGTGATCGGATACATCTTCACTTCACACCATCATGA 2297
||||||||||| || || || | ||||||| |||||||| ||||||||||| |||||||
Sbjct 2191 GGACCTGGTGTCTTCTGCGGAT-TGGTGATTGGATACATATTCACTTCACATAATCATGA 2249
Query 2298 GTGGTTTACGGAAAAGTTTGGTCGGaaaaaaa-TCAGAGT-AACCACAAGTGCTCGTTAA 2355
||||| | |||||||| ||||| ||||||| | |||| ||| |||||||||||||||
Sbjct 2250 ATGGTTCGCTGAAAAGTTCGGTCG-AAAAAAACTTAGAGCCAAC-ACAAGTGCTCGTTAA 2307
Score = 933 bits (505), Expect = 0.0
Identities = 592/634 (93%), Gaps = 6/634 (1%)
Strand=Plus/Plus
Query 1 ATGACTCGAAGCCATTGTTATTGGTTTTATTGTATTATTACCATATATTTCTCCTTCCTT 60
|||||||||||||||||||||||| ||| ||||||||||||||| ||||||||| |||||
Sbjct 1 ATGACTCGAAGCCATTGTTATTGGGTTTCTTGTATTATTACCATCTATTTCTCCCTCCTT 60
Query 61 ATACACTCTCTAGCTTCTCCTTCGCTTCACTTTTGCCGCCACGACCAGAGGGATGGTCTT 120
|||||||||||||||| ||||| ||| |||||||||||||||||||| ||| | ||||||
Sbjct 61 ATACACTCTCTAGCTTTTCCTTTGCTCCACTTTTGCCGCCACGACCAAAGGAACGGTCTT 120
Query 121 TTGAAATTCAGAGACGAGTTTCCGATCTTTGAGTCTAAATCAAGTCCGTGGAATAAGACC 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct 121 TTGAAATTCAGAGACGAGTTTCCGATCTTTGAGTCTAAATCAAGTCCGTGGAATGAGAGC 180
Query 181 ACCGATTGCTGTTCTTGGGACGGTGTCACGTGCGATGATAAATCTGGCCAGGTAATATCA 240
| ||||| |||| |||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct 181 AGTGATTGTTGTTTTTGGGAGGGTGTCACGTGCGATGATAAATCTGGCCAGGTGATATCA 240
Query 241 CTCGACCTTCGTAGCACCCTTCTCAACAGCTCTTTGAAAACCAACAGTAGTCTTTTTAGA 300
||| ||||||||| |||||||||||||| |||||||||||| |||||||| ||||||| |
Sbjct 241 CTCAACCTTCGTAACACCCTTCTCAACAACTCTTTGAAAACTAACAGTAGCCTTTTTAAA 300
Query 301 CTCCAATATCTTCGTCACCTAGACCTTTCTGGTTGCAATCTCCAT-GGAGAGATTCCTTC 359
|||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||
Sbjct 301 CTCCAATATCTTCGTCACCTAGACCTTTCTAGTTGCAATCTC-ATAGGAGAGATTCCTTC 359
Query 360 TTCACTAGGAAACCTTTCCCGTCTCGAAAATCTTGAGCTTTCTTCTAATAGATTGGTCGG 419
|||||||||||||||||| ||||| | ||||||||| |||||||||||||||||||||||
Sbjct 360 TTCACTAGGAAACCTTTCTCGTCTGGTAAATCTTGAACTTTCTTCTAATAGATTGGTCGG 419
Query 420 TGAGATTCCGTATTCAATAGGGAACCTAAAGCAA-CTAAGAAACCTTAGCCTTGGGGATA 478
|| ||||||| |||||||||| ||||||||| || |||||||||||||||||||| ||||
Sbjct 420 TGCGATTCCGGATTCAATAGGCAACCTAAAG-AATCTAAGAAACCTTAGCCTTGGAGATA 478
Query 479 ACGATCTCATAGGAGAAATTCCTTCTTCCCTAGGAAACCTTTCTCTTCTCTTAGATCTTG 538
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 479 ACGATCTCATAGGAGAAATTCCTTCTTCCATAGGAAACCTTTCTCTTCTCTTAGATCTTG 538
Query 539 ACCTTTGGAATAATTC-TTTGGTAGGTGAAGTTCCAGCTTCCATCGGAAACCTAAACGAA 597
||||||||| |||| | ||||||||||||||||||| |||||||||||||||||||||||
Sbjct 539 ACCTTTGGAGTAAT-CATTTGGTAGGTGAAGTTCCATCTTCCATCGGAAACCTAAACGAA 597
Query 598 CTAAGAGTCATGTCACTTGACCGTAACAGCTTAA 631
||||||||||||||||||||||||||||||||||
Sbjct 598 CTAAGAGTCATGTCACTTGACCGTAACAGCTTAA 631
> Ahg476271 jgi|Araly1|476271|fgenesh2_kg.2__1401__AT1G71400.1
Length=2659
Score = 1522 bits (824), Expect = 0.0
Identities = 1677/2076 (81%), Gaps = 110/2076 (5%)
Strand=Plus/Plus
Query 338 ATCTC-CATGGAGAGATTCCTTCTTCACTAGGAAACCTTTCCCGTCTCGAAAATCTTG-- 394
||||| || |||||||||||||||||||||||||||||||| |||||| | || |||
Sbjct 549 ATCTCACA-GGAGAGATTCCTTCTTCACTAGGAAACCTTTCTCGTCTC--ACAT-TTGTT 604
Query 395 AG-CTTTCTTCTAATAGATTGGTCGGTGAGATTCC-GTATTCAATAGGGAACCTAAAGCA 452
|| || || ||||| ||||| ||| ||||||| | ||||| |||| || ||||||||
Sbjct 605 AGCCTAGCTGATAATATCTTGGTAGGTAAGATTCCAG-ATTCATTAGGAAATCTAAAGCA 663
Query 453 ACTAAGAAACCTTAGCCTTGGGGATAACGATCTCATAGGAGAAATTCCTTCTTCCCTAGG 512
|||||||||||||| |||||| ||||||||||| |||||| ||||||||||| |||||
Sbjct 664 TCTAAGAAACCTTAGTCTTGGGTCTAACGATCTCACAGGAGAGATTCCTTCTTCACTAGG 723
Query 513 AAACCTTTCTCTTCTCTTAGATCTTGAC-CTT-TGGAATAATTC-TTTGGTAGGTGAAGT 569
|||||||||| |||| || |||||| | ||| | | |||| || ||||||||||||||
Sbjct 724 AAACCTTTCTAATCTCATACATCTTG-CACTTAT-GCATAA-TCAATTGGTAGGTGAAGT 780
Query 570 TCCAGCTTCCATCGGAAACCTAAACGAACTAAGAGTC-ATGTCACTTGACCGTAACAGCT 628
||| || ||||| ||||| |||||||||||||||| | |||||| |||| || ||||
Sbjct 781 TCCTGCCTCCATTGGAAATCTAAACGAACTAAGAG-CTATGTCATTTGAAAACAATAGCT 839
Query 629 TAAGTGGCAGTATACCTATTTCATTTACTAACTTAACCAAACTTTCCGAGTTTAG-AATC 687
||||||| | ||| |||||||| ||| | || |||||||| ||||| || ||| | ||
Sbjct 840 TAAGTGGAAATATTCCTATTTCCTTTGCCAATTTAACCAAGCTTTCTGAATTT-GTCCTC 898
Query 688 TTCTTTAACAACTTCACATCC-C--TTCC-TTCTGACCTGAGTGGCTTCCACAACTTGGT 743
|| ||| |||||||||||| | |||| || |||| ||||| ||||||||||||||
Sbjct 899 AGCTCTAATAACTTCACATCCACGTTTCCGTT-TGACATGAGTCTATTCCACAACTTGGT 957
Query 744 G-ACGTTTGAT-ATTAGTGC-AAACTCATTTT-CCGGGCATTTCCCTAAATTTTTGTTCT 799
| || |||||| || | | |||||| |||| ||| | ||||||||||| ||||||||
Sbjct 958 GTAC-TTTGATGCTT-CT-CAAAACTC-TTTTAGCGGACCTTTCCCTAAATCTTTGTTCT 1013
Query 800 CGATTCCTTCGTTAGCATG-GGTTTCTATGGATAGA-AACCAATTCT-CAGGACCTATAG 856
||| |||||||| || | |||| | ||| ||| |||||||| | | ||||||||||
Sbjct 1014 TGATAACTTCGTTA-CAAGATGTTTATCTGG-CAGATAACCAATT-TACGGGACCTATAG 1070
Query 857 AGTTTGCTAATATATCTTCATCATCTAAGCTTCAGAATCTAATCCTCACTCGTAACA-AA 915
||||||| |||| |||||||||| |||||||||| |||| ||| ||||||||| |
Sbjct 1071 AGTTTGCAAATACATCTTCATCAAATAAGCTTCAGTCCCTAACCCTTGCTCGTAACAGAC 1130
Query 916 TTAGATGGCTCAATCCCTGAATCCATATCTAAGTTTCTCAACCTCGTA-CTGTTAGATGT 974
|| |||||| ||||||| |||||||||||||| ||||||||||| | | | |||||| |
Sbjct 1131 TT-GATGGCCCAATCCCGGAATCCATATCTAAATTTCTCAACCTTGAAGAT-TTAGATCT 1188
Query 975 T-GCCCACAATAA-TATCAGTGGACCAGTCCCTAGGTCTATGTCAAAGTTAGTTAGCCTC 1032
| | |||||| || | ||| ||| || |||||| ||||| |||||| |||| | ||||
Sbjct 1189 TAG-CCACAACAACT-TCACTGGGGCAATCCCTACATCTATATCAAAGCTAGTCAACCTC 1246
Query 1033 C-GTATCTTTGGTTTTTCCAACAACAAGTTGGAAGGTGAAGTACCAAGTTGGTTGTGGAG 1091
| |||| ||| | ||||||||||||| |||||||| ||||||||| |||| || |||||
Sbjct 1247 CTTTATC-TTGATCTTTCCAACAACAATTTGGAAGGCGAAGTACCAGGTTGCTTATGGAG 1305
Query 1092 ATTGTCTTCAACAATGCTTTCTCACAAT-TCTTTCAGC-AGTTTTGAAAAAATATATTCA 1149
|||| | | ||||||||||||| | ||||| | ||||||| | || | ||||
Sbjct 1306 ATTGAATACGGTGGCGCTTTCTCACAATAT-TTTCA-CAAGTTTTG--AGAA-CTCTTCA 1360
Query 1150 AAAGAAACAATGATCCAAGTGTTGGATCT-AAGTTTCAATTCCTTCCGAGGGA-CGTTTC 1207
| ||| || | || ||| ||||||||| || || |||||| || | | ||| | |||
Sbjct 1361 TATGAAGCACTAATAGAAGAGTTGGATCTGAA-TTCCAATTCATTTC-AAGGACCACTTC 1418
Query 1208 C-CGTTTGGATCTGCAAGCTGAAAGGGTTACACTTCTTAGATTTGTCCAACAATCTCTTC 1266
| | | | |||||||||||| | | ||||| ||| |||||| |||||||||||||||||
Sbjct 1419 CTCATAT-GATCTGCAAGCTTAGATCGTTACGCTTTTTAGATCTGTCCAACAATCTCTTC 1477
Query 1267 AACGGTTCGATTCCTTTATGTTTAAGGAACTTCA----ATC--TTACGGGGCTAATTCTT 1320
| ||| || ||||||| |||| ||||||| |||| || ||| | ||||| | |
Sbjct 1478 AGCGGCTCAATTCCTTCATGTATAAGGAATTTCAGTGGTTCTATTAAAGAGCTAAATATG 1537
Query 1321 GGAAACAACAAGTTCAGTGGAACTCTTCCGGACATATTTGCCAATA-ATACCAACTTACA 1379
|| | |||||| ||||||||||||||||| || |||||| |||| | |||| | |||
Sbjct 1538 GGGAGCAACAACTTCAGTGGAACTCTTCCAGATATATTTTCCAA-AGCTACCGAGTTAGT 1596
Query 1380 ATCATTGGACGTAAGTGGCAACCAGTTAGAGGGGAAGTTTCCAAAGTCTTTGATAAATTG 1439
|||| ||||||| ||| |||||||| | ||||| ||||| |||||||||||||| |||||
Sbjct 1597 ATCAATGGACGTTAGTCGCAACCAGCTGGAGGGAAAGTTGCCAAAGTCTTTGATCAATTG 1656
Query 1440 CAAAGGTTTGCATTTTGTGAATGTTGAAAGCAACAAAATCAAGGATACGTTT-CCATCTT 1498
||||| | |||| |||||||| | ||||||||||||||||||| | ||| ||||| |
Sbjct 1657 CAAAGCTCTGCAACTTGTGAATATAAAAAGCAACAAAATCAAGGACA-ATTTCCCATCAT 1715
Query 1499 GGTTGGGATCTCTACCATCTTTACAAGTTCTCATCCTAAGATCAAACGACTTCTATGGTC 1558
|||||| ||||||||| || ||||| || |||| ||| |||||||||| |||||||| |
Sbjct 1716 GGTTGGAATCTCTACCGTCATTACATGTCCTCAACCTCGGATCAAACGAGTTCTATGGGC 1775
Query 1559 CGTTGTATCATC-CCAGCATGTCCATTGGGTTTCAAG-GTTTAAGAATCATCGATATATC 1616
|||||||||||| ||| |||||| |||||||||| || |||||||| |||||||||||||
Sbjct 1776 CGTTGTATCATCACCA-CATGTCTATTGGGTTTC-AGAGTTTAAGAGTCATCGATATATC 1833
Query 1617 ACACAATGGCTTCTCTGG-AGTACTCCCACCTAACtttttttCTAGTTGGCGTGAAATGA 1675
| |||||| |||| |||| | | ||||||||| ||| ||| || | ||| |||||||
Sbjct 1834 AGACAATGACTTCACTGGAACT-CTCCCACCTCACTATTTCTCCAACTGGAAAGAAATGA 1892
Query 1676 TTACATTAGTCCATGGAAGTTAT-GA--A-TACATTGA-AGA-TATT-CAGA-ATTATTC 1727
| |||||| | ||||| || || | |||| ||| ||| | || ||| || |
Sbjct 1893 TCACATTA----ACGGAAGAAATGGACGAGTACA-TGACAGAGTTTTGGAGATATGCTGA 1947
Query 1728 T-CTTATCTATCGCT-CCATGGAAATGGTGAATAAAGGAGTAGAGATGAGTTTTGAGAGG 1785
| |||| |||| | ||||||||||||||||||||||| || ||||| || ||| ||
Sbjct 1948 TAGTTAT-TATC-ATGAGATGGAAATGGTGAATAAAGGAGTTGATATGAGCTTCGAGCGG 2005
Query 1786 ATCCGACAAGACTTTAGAGCCATTGATTTTTCTGAAAACAGAATTTATGGCGA-AATACC 1844
|||||| ||||||| ||||||||||||||||||| ||||| ||| |||||| | || ||
Sbjct 2006 ATCCGAAAAGACTTCAGAGCCATTGATTTTTCTGGAAACAAAATCTATGGC-AGCATCCC 2064
Query 1845 TGA-ATCCATTGG-TTGTTTGGAGGAACTGCGTCTTCTCAACTTGTCAGGTAACGCTTTC 1902
| | |||| |||| || |||| |||||||||| |||||||| ||||||||||||||||||
Sbjct 2065 T-AGATCCCTTGGCTT-TTTGAAGGAACTGCGCCTTCTCAATTTGTCAGGTAACGCTTTC 2122
Query 1903 ACAAGCGATATCCCACGGGTCTGGGAAAATCTCACAAAGCTCGAGACGTTAGACCTATCA 1962
|||||||||||||||| ||| || |||| | ||||||||||||||||||||||||||
Sbjct 2123 TCAAGCGATATCCCACGTTTCTTGGCAAATTTGACAAAGCTCGAGACGTTAGACCTATCC 2182
Query 1963 CGTAACAAGTTGTCTGGTCAAATCCCACAAGATCTTGGTAAACTCTCCTTTCTGTCGTAC 2022
||||| ||| |||| ||||||||||| |||||||||||||||||||| |||||||| |||
Sbjct 2183 CGTAATAAGCTGTCAGGTCAAATCCCTCAAGATCTTGGTAAACTCTCTTTTCTGTCATAC 2242
Query 2023 ATGAACTTCTCCCATAACCGTCTCCAAGGTCCAGTGCCACGAGGCACACAGTTTCAAAGG 2082
||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||
Sbjct 2243 ATGAACTTCTCCCATAACCTTCTCCAAGGTCCTGTGCCACGAGGCACACAGTTTCAAAGG 2302
Query 2083 CAGAGATGTTCTTCATTTTTGGACAACCATAGACTCTACGGTCTCGAAGATATCTGT-GA 2141
|| | |||||||||||| |||||||||| || |||||||||||||||||| |||||| ||
Sbjct 2303 CAAAAATGTTCTTCATTCTTGGACAACCCTAAACTCTACGGTCTCGAAGAAATCTGTGGA 2362
Query 2142 GGAGACTCATGTCC-CGAATCCTACATCACAACCATCCGAGGATTTGTTAGACGAGGAGG 2200
|| ||||||| || |||||||||||| |||| | ||||||| |||| ||| | ||||
Sbjct 2363 -GAAACTCATG-CCTTGAATCCTACATCGCAACTACCCGAGGAATTGTCAGAGGCTGAGG 2420
Query 2201 AAAAAATGTTCAACTGGGTAGCAGCTGCAATAGCATATGGACCTGGTGTATTTTGTGG-T 2259
| |||||||||||||||||||||||||||||||| |||||||||||||| || ||||| |
Sbjct 2421 AGAAAATGTTCAACTGGGTAGCAGCTGCAATAGCTTATGGACCTGGTGTGTTATGTGGAT 2480
Query 2260 CTGGTGATCGGATACATCTTCACTTCACACCATCATGAGTGGTTTACGGAAAAGTTTGGT 2319
||||||||||| | ||||||||||||||| ||||||||||||| || |||| |||||||
Sbjct 2481 -TGGTGATCGGACATATCTTCACTTCACACAATCATGAGTGGTTCACAGAAATGTTTGGT 2539
Query 2320 CGGaaaaaaaTCAGAGTAACCACAAGTGCTCGTTAA 2355
|| ||| ||| | ||| | ||||||| || ||||
Sbjct 2540 CG-AAAGAAA-CT-AGTCATTACAAGTGTTCATTAA 2572
Score = 473 bits (256), Expect = 2e-132
Identities = 498/610 (82%), Gaps = 35/610 (6%)
Strand=Plus/Plus
Query 7 CGAAGCCATTGTTATTGGTTTTATTG-TATTATTACCATATATTTC-TCCTTCCTTATAC 64
|||||||||||| ||||| ||| || |||||||| ||| | |||| ||| ||||| |||
Sbjct 83 CGAAGCCATTGTCATTGGGTTT-CTGATATTATTATCATCTTTTTCTTCC-TCCTTGTAC 140
Query 65 ACTCTCTAGCTTCTCCTTCGCTTCACTTTTGCCGCCACGACCAGAGGGATGGTCTTTTGA 124
|||||||||||||| |||||| ||||||||||| || |||||||| |||| |||||||
Sbjct 141 ACTCTCTAGCTTCTTCTTCGCCCCACTTTTGCCGTCATGACCAGAGAGATGCTCTTTTGG 200
Query 125 AATTCAGAGACGAGTTTCCGATCTTTGAGTCTAAAT-CAAGTCCGTGGAATAAGACCACC 183
||||||||| ||||||||||| | || || || ||||||||||||||| |||
Sbjct 201 AATTCAGAGGCGAGTTTCCGA----T-AG-----ATGCAGGTCCGTGGAATAAGAGCACT 250
Query 184 GATTGCTGTTCTTGGGACGGTGTCACGTGCGATGATAAATCTGGCCAGGTAATATCACTC 243
||||| |||| |||| |||| ||||| ||||||||||||||||| |||||||||||||||
Sbjct 251 GATTGTTGTTTTTGGAACGGAGTCACATGCGATGATAAATCTGGTCAGGTAATATCACTC 310
Query 244 GACCTTCGTAGCACCCTTCTCAACAGCTCTTTGAAAACCAACAGTAGTCTTTTTAGACTC 303
||||||| || |||| ||||| || ||| |||||||||||||||||| ||||||| ||||
Sbjct 311 GACCTTCCTAACACCTTTCTCCACGGCTATTTGAAAACCAACAGTAGCCTTTTTAAACTC 370
Query 304 CAATATCTTCGTCACCTAGACCTTTCTGGTTGCAATCTCCATGGAGAGATTCCTTCTTCA 363
|||||||||||||||||| ||||| | |||||||||| | ||||||||||||||||||
Sbjct 371 CAATATCTTCGTCACCTAAACCTTAGTAATTGCAATCTCAAAGGAGAGATTCCTTCTTCA 430
Query 364 CTAGGAAACCTTTCCCGTCTCGAAAATC-TTGAGCTTT-CTTCTAAT-AGATTGGTCGGT 420
|||||||||||||| | |||| | | | || | |||| ||| |||| | |||||| ||
Sbjct 431 CTAGGAAACCTTTCTCATCTC-ACACTTGTTAACCTTTTCTT-TAATCA-ATTGGTAGGA 487
Query 421 GAGATTCCGTATTCAATAGGGAACCTAAAGCAACTAAGAAACCTTAGCCTTGGGGATAAC 480
|| |||||| |||||| || || ||||| || |||||| |||||| |||| | ||||
Sbjct 488 GAAATTCCGGCTTCAATCGGCAATCTAAACCAGCTAAGATACCTTAACCTTCAGTCTAAC 547
Query 481 GATCTCATAGGAGAAATTCCTTCTTCCCTAGGAAACCTTTCTCTTCTCTTAGATCTT-GA 539
||||||| |||||| ||||||||||| |||||||||||||||| |||| | | || |
Sbjct 548 GATCTCACAGGAGAGATTCCTTCTTCACTAGGAAACCTTTCTCGTCTCACATTTGTTAG- 606
Query 540 CCTT--TGGAATAAT-TCTTTGGTAGGTGAAG-TTCCAGCTTCCATC-GGAAACCTAAAC 594
||| || | |||| |||| ||||||| ||| |||||| ||| || ||||| |||||
Sbjct 607 CCTAGCTG-A-TAATATCTT-GGTAGGT-AAGATTCCAGATTC-ATTAGGAAATCTAAA- 660
Query 595 GAA-CTAAGA 603
| | ||||||
Sbjct 661 GCATCTAAGA 670
Score = 65.8 bits (35), Expect = 1e-09
Identities = 101/130 (78%), Gaps = 16/130 (12%)
Strand=Plus/Plus
Query 338 ATCTC-CATGGAGAGATTCCTTCTTCACTAGGAAACCTTTCCCGTCTCGAAA-ATCTTG- 394
||||| || |||||||||||||||||||||||||||||||| |||| | | ||||||
Sbjct 693 ATCTCACA-GGAGAGATTCCTTCTTCACTAGGAAACCTTTCTAATCTC-ATACATCTTGC 750
Query 395 AGCTTTCTTC-TAAT-AGATTGGTCGGTGA-GATTCC-GTATTCAATAGGGAACCTAAA- 449
| ||| | | |||| | |||||| ||||| | |||| | | || | || || |||||
Sbjct 751 A-CTTA-TGCATAATCA-ATTGGTAGGTGAAG-TTCCTGCCTCCATT-GGAAATCTAAAC 805
Query 450 GCAACTAAGA 459
| ||||||||
Sbjct 806 G-AACTAAGA 814
> Ahg497292 jgi|Araly1|497292|fgenesh2_kg.158__1__AT1G71400.1
Length=2646
Score = 1509 bits (817), Expect = 0.0
Identities = 1650/2039 (81%), Gaps = 109/2039 (5%)
Strand=Plus/Plus
Query 338 ATCTC-CATGGAGAGATTCCTTCTTCACTAGGAAACCTTTCCCGTCTCGAAAATCTTG-- 394
||||| || |||||||||||||||||||||||||||||||| |||||| | || |||
Sbjct 576 ATCTCACA-GGAGAGATTCCTTCTTCACTAGGAAACCTTTCTCGTCTC--ACAT-TTGTT 631
Query 395 AG-CTTTCTTCTAATAGATTGGTCGGTGAGATTCC-GTATTCAATAGGGAACCTAAAGCA 452
|| || || ||||| ||||| ||| ||||||| | ||||| |||| || ||||||||
Sbjct 632 AGCCTAGCTGATAATATCTTGGTAGGTAAGATTCCAG-ATTCATTAGGAAATCTAAAGCA 690
Query 453 ACTAAGAAACCTTAGCCTTGGGGATAACGATCTCATAGGAGAAATTCCTTCTTCCCTAGG 512
|||||||||||||| |||||| ||||||||||| |||||| ||||||||||| |||||
Sbjct 691 TCTAAGAAACCTTAGTCTTGGGTCTAACGATCTCACAGGAGAGATTCCTTCTTCACTAGG 750
Query 513 AAACCTTTCTCTTCTCT-TAGATCTTGAC-CTT-TGGAATAATTC-TTTGGTAGGTGAAG 568
|||||||||| ||| | || |||||| | ||| | | |||| || |||||||||||||
Sbjct 751 AAACCTTTCTAATCT-TATACATCTTG-CACTTAT-GCATAA-TCAATTGGTAGGTGAAG 806
Query 569 TTCCAGCTTCCATCGGAAACCTAAACGAACTAAGAGTC-ATGTCACTTGACCGTAACAGC 627
|||| || ||||| ||||| |||||||||||||||| | |||||| |||| || |||
Sbjct 807 TTCCTGCCTCCATTGGAAATCTAAACGAACTAAGAG-CTATGTCATTTGAAAACAATAGC 865
Query 628 TTAAGTGGCAGTATACCTATTTCATTTACTAACTTAACCAAACTTTCCGAGTTTAG-AAT 686
|||||||| | ||| |||||||| ||| | || |||||||| ||||| || ||| | |
Sbjct 866 TTAAGTGGAAATATTCCTATTTCCTTTGCCAATTTAACCAAGCTTTCTGAATTT-GTCCT 924
Query 687 CTTCTTTAACAACTTCACATCC-C--TTCC-TTCTGACCTGAGTGGCTTCCACAACTTGG 742
| || ||| |||||||||||| | |||| || |||| ||||| |||||||||||||
Sbjct 925 CAGCTCTAATAACTTCACATCCACGTTTCCGTT-TGACATGAGTCTATTCCACAACTTGG 983
Query 743 TG-ACGTTTGAT-ATTAGTGC-AAACTCATTTT-CCGGGCATTTCCCTAAATTTTTGTTC 798
|| || |||||| || | | |||||| |||| ||| | ||||||||||| |||||||
Sbjct 984 TGTAC-TTTGATGCTT-CT-CAAAACTC-TTTTAGCGGACCTTTCCCTAAATCTTTGTTC 1039
Query 799 TCGATTCCTTCGTTAGCATG-GGTTTCTATGGATAGA-AACCAATTCT-CAGGACCTATA 855
| ||| |||||||| || | |||| | ||| ||| |||||||| | | |||||||||
Sbjct 1040 TTGATAACTTCGTTA-CAAGATGTTTATCTGG-CAGATAACCAATT-TACGGGACCTATA 1096
Query 856 GAGTTTGCTAATATATCTTCATCATCTAAGCTTCAGAATCTAATCCTCACTCGTAACA-A 914
|||||||| |||| |||||||||| |||||||||| |||| ||| ||||||||| |
Sbjct 1097 GAGTTTGCAAATACATCTTCATCAAATAAGCTTCAGTCCCTAACCCTTGCTCGTAACAGA 1156
Query 915 ATTAGATGGCTCAATCCCTGAATCCATATCTAAGTTTCTCAACCTCGTA-CTGTTAGATG 973
|| |||||| ||||||| |||||||||||||| ||||||||||| | | | ||||||
Sbjct 1157 CTT-GATGGCCCAATCCCGGAATCCATATCTAAATTTCTCAACCTTGAAGAT-TTAGATC 1214
Query 974 TT-GCCCACAATAA-TATCAGTGGACCAGTCCCTAGGTCTATGTCAAAGTTAGTTAGCCT 1031
|| | |||||| || | ||| ||| || |||||| ||||| |||||| |||| | |||
Sbjct 1215 TTAG-CCACAACAACT-TCACTGGGGCAATCCCTACATCTATATCAAAGCTAGTCAACCT 1272
Query 1032 CC-GTATCTTTGGTTTTTCCAACAACAAGTTGGAAGGTGAAGTACCAAGTTGGTTGTGGA 1090
|| |||| ||| | ||||||||||||| |||||||||||||||||| |||| || ||||
Sbjct 1273 CCTTTATC-TTGATCTTTCCAACAACAATTTGGAAGGTGAAGTACCAGGTTGCTTATGGA 1331
Query 1091 GATTGTCTTCAACAATGCTTTCTCACAAT-TCTTTCAGC-AGTTTTGAAAAAATATATTC 1148
|| || | | ||||||||||||| | ||||| | ||||||| |||| | |||
Sbjct 1332 GAATGAGTACGGTGGCGCTTTCTCACAATAT-TTTCA-CAAGTTTTG--AAAA-CTCTTC 1386
Query 1149 AAAAGAAACAATGATCCAAGTGTTGGATCT-AAGTTTCAATTCCTTCCGAGGGA-CGTTT 1206
| | ||| || | || ||| ||||||||| || || |||||| || | | ||| | ||
Sbjct 1387 ATATGAAGCACTAATAGAAGAGTTGGATCTGAA-TTCCAATTCATTTC-AAGGACCACTT 1444
Query 1207 CC-CGTTTGGATCTGCAAGCTGAAAGGGTTACACTTCTTAGATTTGTCCAACAATCTCTT 1265
|| | | | |||||||||||| | | ||||| ||| |||||| ||||||||||||||||
Sbjct 1445 CCTCATAT-GATCTGCAAGCTTAGATCGTTACGCTTTTTAGATCTGTCCAACAATCTCTT 1503
Query 1266 CAACGGTTCGATTCCTTTATGTTTAAGGAACTTCA----ATC--TTACGGGGCTAATTCT 1319
|| ||| || ||||||| |||| ||||||| |||| || ||| | ||||| | |
Sbjct 1504 CAGCGGCTCAATTCCTTCATGTATAAGGAATTTCAGTGGTTCTATTAAAGAGCTAAATAT 1563
Query 1320 TGGAAACAACAAGTTCAGTGGAACTCTTCCGGACATATTTGCCAATA-ATACCAACTTAC 1378
|| | |||||| ||||||||||||||||| || |||||| |||| | |||| | |||
Sbjct 1564 GGGGAGCAACAACTTCAGTGGAACTCTTCCAGATATATTTTCCAA-AGCTACCGAGTTAG 1622
Query 1379 AATCATTGGACGTAAGTGGCAACCAGTTAGAGGGGAAGTTTCCAAAGTCTTTGATAAATT 1438
|||| ||||||| ||| |||||||| | ||||| ||||| |||||||||||||| ||||
Sbjct 1623 TATCAATGGACGTTAGTCGCAACCAGCTGGAGGGAAAGTTGCCAAAGTCTTTGATCAATT 1682
Query 1439 GCAAAGGTTTGCATTTTGTGAATGTTGAAAGCAACAAAATCAAGGATACGTTT-CCATCT 1497
|||||| | |||| |||||||| | ||||||||||||||||||| | ||| |||||
Sbjct 1683 GCAAAGCTCTGCAACTTGTGAATATAAAAAGCAACAAAATCAAGGACA-ATTTCCCATCA 1741
Query 1498 TGGTTGGGATCTCTACCATCTTTACAAGTTCTCATCCTAAGATCAAACGACTTCTATGGT 1557
||||||| ||||||||| || ||||| || |||| ||| |||||||||| ||||||||
Sbjct 1742 TGGTTGGAATCTCTACCGTCATTACATGTCCTCAACCTCGGATCAAACGAGTTCTATGGG 1801
Query 1558 CCGTTGTATCATC-CCAGCATGTCCATTGGGTTTCAAG-GTTTAAGAATCATCGATATAT 1615
||||||||||||| ||| |||||| |||||||||| || |||||||| ||||||||||||
Sbjct 1802 CCGTTGTATCATCACCA-CATGTCTATTGGGTTTC-AGAGTTTAAGAGTCATCGATATAT 1859
Query 1616 CACACAATGGCTTCTCTGG-AGTACTCCCACCTAACtttttttCTAGTTGGCGTGAAATG 1674
|| |||||| |||| |||| | | ||||||||| ||| ||| || | ||| ||||||
Sbjct 1860 CAGACAATGACTTCACTGGAACT-CTCCCACCTCACTATTTCTCCAACTGGAAAGAAATG 1918
Query 1675 ATTACATTAGTCCATGGAAGTTAT-GA--A-TACATTGA-AGA-TATTCAGA-ATTATTC 1727
|| |||||| | ||||| || || | |||| ||| ||| | || || | ||| |
Sbjct 1919 ATCACATTA----ACGGAAGAAATGGACGAGTACA-TGACAGAGT-TTTGGAGA-TATGC 1971
Query 1728 TCTTATCTA-TCGC-T-CCATGGAAATGGTGAATAAAGGAGTAGAGATGAGTTTTGAGAG 1784
| || ||| | | | ||||||||||||||||||||||| || ||||| || ||| |
Sbjct 1972 TGATAGCTATTATCATGAGATGGAAATGGTGAATAAAGGAGTTGATATGAGCTTCGAGCG 2031
Query 1785 GATCCGACAAGACTTTAGAGCCATTGATTTTTCTGAAAACAGAATTTATGGCGA-AATAC 1843
||||||| ||||||| ||||||||||||||||||| ||||| ||| |||||| | || |
Sbjct 2032 GATCCGAAAAGACTTCAGAGCCATTGATTTTTCTGGAAACAAAATCTATGGC-AGCATCC 2090
Query 1844 CTGA-ATCCATTGG-TTGTTTGGAGGAACTGCGTCTTCTCAACTTGTCAGGTAACGCTTT 1901
|| | |||| |||| || |||| |||||||||| |||||||| |||||||||||||||||
Sbjct 2091 CT-AGATCCCTTGGCTT-TTTGAAGGAACTGCGCCTTCTCAATTTGTCAGGTAACGCTTT 2148
Query 1902 CACAAGCGATATCCCACGGGTCTGGGAAAATCTCACAAAGCTCGAGACGTTAGACCTATC 1961
| |||||||||||||||| ||| || |||| | ||||||||||||||||||||||||||
Sbjct 2149 CTCAAGCGATATCCCACGTTTCTTGGCAAATTTGACAAAGCTCGAGACGTTAGACCTATC 2208
Query 1962 ACGTAACAAGTTGTCTGGTCAAATCCCACAAGATCTTGGTAAACTCTCCTTTCTGTCGTA 2021
||||| ||| |||| ||||||||||| |||||||||||||||||||| |||||||| ||
Sbjct 2209 CCGTAATAAGCTGTCAGGTCAAATCCCTCAAGATCTTGGTAAACTCTCTTTTCTGTCATA 2268
Query 2022 CATGAACTTCTCCCATAACCGTCTCCAAGGTCCAGTGCCACGAGGCACACAGTTTCAAAG 2081
|||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct 2269 CATGAACTTCTCCCATAACCTTCTCCAAGGTCCTGTGCCACGAGGCACACAGTTTCAAAG 2328
Query 2082 GCAGAGATGTTCTTCATTTTTGGACAACCATAGACTCTACGGTCTCGAAGATATCTGT-G 2140
||| | |||||||||||| |||||||||| || |||||||||||||||||| |||||| |
Sbjct 2329 GCAAAAATGTTCTTCATTCTTGGACAACCCTAAACTCTACGGTCTCGAAGAAATCTGTGG 2388
Query 2141 AGGAGACTCATGTCC-CGAATCCTACATCACAACCATCCGAGGATTTGTTAGACGAGGAG 2199
| || ||||||| || |||||||||||| |||| | ||||||| |||| ||| | |||
Sbjct 2389 A-GAAACTCATG-CCTTGAATCCTACATCGCAACTACCCGAGGAATTGTCAGAGGCTGAG 2446
Query 2200 GAAAAAATGTTCAACTGGGTAGCAGCTGCAATAGCATATGGACCTGGTGTATTTTGTGG- 2258
|| |||||||||||||||||||||||||||||||| |||||||||||||| || |||||
Sbjct 2447 GAGAAAATGTTCAACTGGGTAGCAGCTGCAATAGCTTATGGACCTGGTGTGTTATGTGGA 2506
Query 2259 TCTGGTGATCGGATACATCTTCACTTCACACCATCATGAGTGGTTTACGGAAAAGTTTG 2317
| ||||||||||| | ||||||||||||||| ||||||||||||| || |||| |||||
Sbjct 2507 T-TGGTGATCGGACATATCTTCACTTCACACAATCATGAGTGGTTCACAGAAATGTTTG 2564
Score = 444 bits (240), Expect = 2e-123
Identities = 505/627 (81%), Gaps = 42/627 (7%)
Strand=Plus/Plus
Query 7 CGAAGCCATTGTTATTGGTTTTATTG-TATTATTACCATATATTTC-TCCTTCCTTATAC 64
|||||||||||| ||||| ||| || ||||||| ||| | |||| ||| ||||| |||
Sbjct 83 CGAAGCCATTGTCATTGGGTTT-CTGACATTATTATCATCTTTTTCTTCC-TCCTTGTAC 140
Query 65 ACTCTCTAGCTTCTCCTTCGCTTCACTTTTGCCGCCACGACCAGAGGGATGGTCTTTTGA 124
|||||||||||||| |||||| ||||||||||| || |||||||| |||| |||||||
Sbjct 141 ACTCTCTAGCTTCTTCTTCGCCCCACTTTTGCCGTCATGACCAGAGAGATGCTCTTTTGG 200
Query 125 AATTCAGAGACGAGTTTCC----GA----TCTTTG---AGTCT--A-A-AT-CA-A-GTC 166
||||||||| ||||||||| || |||||| | | | | | || | | |||
Sbjct 201 AATTCAGAGGCGAGTTTCCGATAGATGCCTCTTTGAAAATTATGAATACATGGAGAGGTC 260
Query 167 CGTGGAATAAGACCACCGATTGCTGTTCTTGGGACGGTGTCACGTGCGATGATAAATCTG 226
|||||||||||| ||| ||||| |||| |||| |||| ||||| ||||||||||||||||
Sbjct 261 CGTGGAATAAGAGCACTGATTGTTGTTTTTGGAACGGAGTCACATGCGATGATAAATCTG 320
Query 227 GCCAGGTAATATCACTCGACCTTCGTAGCACCCTTCTCAACAGCTCTTTGAAAACCAACA 286
| |||||||||||||||||||||| || |||| ||||| || ||| ||||||||||||||
Sbjct 321 GTCAGGTAATATCACTCGACCTTCCTAACACCTTTCTCCACGGCTATTTGAAAACCAACA 380
Query 287 GTAGTCTTTTTAGACTCCAATATCTTCGTCACCTAGACCTTTCTGGTTGCAATCTCCATG 346
|||| ||||||| |||||||||||||||||||||| ||||| | |||||||||| | |
Sbjct 381 GTAGCCTTTTTAAACTCCAATATCTTCGTCACCTAAACCTTAGTAATTGCAATCTCAAAG 440
Query 347 GAGAGATTCCTTCTTCACTAGGAAACCTTTCCCGTCTCGAAAATC-TTGAGCTTT-CTTC 404
||||||||||||||||||||||||||||||| | |||| | | | || | |||| |||
Sbjct 441 GAGAGATTCCTTCTTCACTAGGAAACCTTTCTCATCTC-ACACTTGTTAACCTTTTCTT- 498
Query 405 TAAT-AGATTGGTCGGTGAGATTCCGTATTCAATAGGGAACCTAAAGCAACTAAGAAACC 463
|||| | |||||| || || |||||| |||||| || || ||||| || |||||| |||
Sbjct 499 TAATCA-ATTGGTAGGAGAAATTCCGGCTTCAATCGGCAATCTAAACCAGCTAAGATACC 557
Query 464 TTAGCCTTGGGGATAACGATCTCATAGGAGAAATTCCTTCTTCCCTAGGAAACCTTTCTC 523
||| |||| | ||||||||||| |||||| ||||||||||| ||||||||||||||||
Sbjct 558 TTAACCTTCAGTCTAACGATCTCACAGGAGAGATTCCTTCTTCACTAGGAAACCTTTCTC 617
Query 524 TTCTCTTAGATCTT-GACCTT--TGGAATAAT-TCTTTGGTAGGTGAAG-TTCCAGCTTC 578
|||| | | || | ||| || | |||| |||| ||||||| ||| |||||| |||
Sbjct 618 GTCTCACATTTGTTAG-CCTAGCTG-A-TAATATCTT-GGTAGGT-AAGATTCCAGATTC 672
Query 579 CATC-GGAAACCTAAACGAA-CTAAGA 603
|| ||||| ||||| | | ||||||
Sbjct 673 -ATTAGGAAATCTAAA-GCATCTAAGA 697
Score = 63.9 bits (34), Expect = 5e-09
Identities = 39/41 (95%), Gaps = 2/41 (5%)
Strand=Plus/Plus
Query 338 ATCTC-CATGGAGAGATTCCTTCTTCACTAGGAAACCTTTC 377
||||| || ||||||||||||||||||||||||||||||||
Sbjct 720 ATCTCACA-GGAGAGATTCCTTCTTCACTAGGAAACCTTTC 759
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 88712180605
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5