BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G71400.1
Length=2763
Score E
Sequences producing significant alignments: (Bits) Value
Ahg497292 jgi|Araly1|497292|fgenesh2_kg.158__1__AT1G71400.1 3341 0.0
Ahg476271 jgi|Araly1|476271|fgenesh2_kg.2__1401__AT1G71400.1 3221 0.0
Ahg476270 jgi|Araly1|476270|fgenesh2_kg.2__1400__AT1G71390.1 1232 0.0
Ahg477824 jgi|Araly1|477824|fgenesh2_kg.3__525__AT3G05360.1 67.6 5e-10
> Ahg497292 jgi|Araly1|497292|fgenesh2_kg.158__1__AT1G71400.1
Length=2646
Score = 3341 bits (1809), Expect = 0.0
Identities = 2342/2594 (90%), Gaps = 57/2594 (2%)
Strand=Plus/Plus
Query 1 TTCTTCTTAAAGAGAGAACC-ACTGAA--TCACACAATTCAGTACTCACTACACAATCTC 57
|||||||||||| ||| ||| | |||| ||||||||||| |||| || | |||| ||
Sbjct 1 TTCTTCTTAAAGTGAGGACCAAATGAAGCACACACAATTCATTACTTACAAGACAAAATC 60
Query 58 AAAACAGAAAGATATGATGATCCGAAGCCATCGTCATTGGGTTTTTTCTAGTC-GTATTA 116
||||||||||||||||||||||||||||||| ||||||||| ||||| | | |||||
Sbjct 61 AAAACAGAAAGATATGATGATCCGAAGCCATTGTCATTGGG---TTTCT-GACATTATTA 116
Query 117 TCATCTTTCTCTCCCTCCTTGTTCACTCTCTAGCTTCTTCTTCGCCCCACTTTTGCCGTG 176
|||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 117 TCATCTTTTTCTTCCTCCTTGTACACTCTCTAGCTTCTTCTTCGCCCCACTTTTGCCGTC 176
Query 177 ATGACCAGAGAGATGCTCTTTTGGAATTCAGAGGCGAGTTTCCGATAAATGCGTCATGGC 236
||||||||||||||||||||||||||||||||||||||||||||||| |||| || | |
Sbjct 177 ATGACCAGAGAGATGCTCTTTTGGAATTCAGAGGCGAGTTTCCGATAGATGCCTCTTTGA 236
Query 237 ATATTATGAATCA-ATGGAGAGGTCCGTGGAATAAGAGCACTGATTGTTGTCTTTGGAAT 295
| ||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 237 AAATTATGAAT-ACATGGAGAGGTCCGTGGAATAAGAGCACTGATTGTTGTTTTTGGAAC 295
Query 296 GGAGTCACTTGCAATGATAAATCTGGTCAGGTAATATCACTCGACATTCCTAACACCTTT 355
|||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 296 GGAGTCACATGCGATGATAAATCTGGTCAGGTAATATCACTCGACCTTCCTAACACCTTT 355
Query 356 CTCAACAACTATTTGAAAACCAACAGTAGCCTTTTTAAACTCCAATATCTTCGTCACCTA 415
||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 356 CTCCACGGCTATTTGAAAACCAACAGTAGCCTTTTTAAACTCCAATATCTTCGTCACCTA 415
Query 416 GACCTTACG-AATTGCAATCTCTACGGAGAGATTCCTTCTTCACTAGGAAACCTTTCTCA 474
|||||| | |||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct 416 AACCTTA-GTAATTGCAATCTCAAAGGAGAGATTCCTTCTTCACTAGGAAACCTTTCTCA 474
Query 475 TCTCACACTTGTTAACCTTTACTTTAAT-AAGTTTGTTGGAGAAATTCCGGCTTCAATCG 533
|||||||||||||||||||| ||||||| || || || ||||||||||||||||||||||
Sbjct 475 TCTCACACTTGTTAACCTTTTCTTTAATCAA-TTGGTAGGAGAAATTCCGGCTTCAATCG 533
Query 534 GCAATCTAAACCAGCTTAGACACCTTATCCTTGCTA--ATAACG-TCCTTACAGGAGAGA 590
|||||||||||||||| ||| |||||| |||| | | ||||| | || ||||||||||
Sbjct 534 GCAATCTAAACCAGCTAAGATACCTTAACCTT-C-AGTCTAACGAT-CTCACAGGAGAGA 590
Query 591 TTCCTTCTTCACTAGGAAACCTTTCTCGTCTCGTAAACCTTG--AG-CTTTTTTCTAATA 647
|||||||||||||||||||||||||||||||| | | ||| || || | |||||
Sbjct 591 TTCCTTCTTCACTAGGAAACCTTTCTCGTCTC--ACA-TTTGTTAGCCTAGCTGATAATA 647
Query 648 GATTGGTTGGTAAGATTCCAGATTCAATAGGAGATCTAAAGCAGCTAAGAAACCTTAGCC 707
||||| |||||||||||||||||| ||||| |||||||||| |||||||||||||| |
Sbjct 648 TCTTGGTAGGTAAGATTCCAGATTCATTAGGAAATCTAAAGCATCTAAGAAACCTTAGTC 707
Query 708 TTGCGTCTAACAATCTCATAGGCGAGATTCCTTCTTC-CTTAGGAAACCTTTCTAATCTC 766
||| ||||||| |||||| ||| |||||||||||||| | |||||||||||||||||||
Sbjct 708 TTGGGTCTAACGATCTCACAGGAGAGATTCCTTCTTCAC-TAGGAAACCTTTCTAATCTT 766
Query 767 GTACATCTTGTTCTTACGCATAATCAATTGGTAGGTGAAGTTCCTGCCTCCATAGGAAAT 826
||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||
Sbjct 767 ATACATCTTGCACTTATGCATAATCAATTGGTAGGTGAAGTTCCTGCCTCCATTGGAAAT 826
Query 827 CTAATCGAACTAAGAGTTATGTCATTTGAAAACAATAGCTTAAGTGGCAACATTCCTATT 886
|||| ||||||||||| |||||||||||||||||||||||||||||| || |||||||||
Sbjct 827 CTAAACGAACTAAGAGCTATGTCATTTGAAAACAATAGCTTAAGTGGAAATATTCCTATT 886
Query 887 TCCTTCGCCAATTTAACAAAGCTTTCT-ATATTTGTCCTCAGCTCTAATAACTTCACATC 945
||||| ||||||||||| ||||||||| | ||||||||||||||||||||||||||||||
Sbjct 887 TCCTTTGCCAATTTAACCAAGCTTTCTGA-ATTTGTCCTCAGCTCTAATAACTTCACATC 945
Query 946 CACGTTTCCATTTGACATGAGTATATTCCACAACTTGGAGTACTTTGATGTTTCTTATAA 1005
||||||||| |||||||||||| ||||||||||||||| ||||||||||| |||| | ||
Sbjct 946 CACGTTTCCGTTTGACATGAGTCTATTCCACAACTTGGTGTACTTTGATGCTTCTCAAAA 1005
Query 1006 CTCATTTAGCGGGCCTTTTCCTAAATCTCTGTTATTGATTCCTTCCTTAGAATCTATTTA 1065
||| |||||||| ||||| ||||||||| |||| ||||| |||| ||| || | ||||
Sbjct 1006 CTCTTTTAGCGGACCTTTCCCTAAATCTTTGTTCTTGATAACTTCGTTACAAGATGTTTA 1065
Query 1066 TCT-GCAAGAAAACCAATTTACGGGACCTATAGAGTTTGCAAATACATCTTCATCAACTA 1124
||| || ||| |||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1066 TCTGGC-AGATAACCAATTTACGGGACCTATAGAGTTTGCAAATACATCTTCATCAAATA 1124
Query 1125 AGCTTCAGGACCTAATCCTTGGTCGTAACAGACTCCATGGCCCAATCCCGGAATCTATAT 1184
|||||||| ||||| ||||| |||||||||||| ||||||||||||||||||| ||||
Sbjct 1125 AGCTTCAGTCCCTAACCCTTGCTCGTAACAGACTTGATGGCCCAATCCCGGAATCCATAT 1184
Query 1185 CTAGACTTCTCAACCTTGAAGAGCTAGATATCAGCCACAACAACTTTACTGGGGCAATCC 1244
||| | |||||||||||||||| ||||| | |||||||||||||| |||||||||||||
Sbjct 1185 CTAAATTTCTCAACCTTGAAGATTTAGATCTTAGCCACAACAACTTCACTGGGGCAATCC 1244
Query 1245 CTCCAACTATATCAAAGCTAGTCAACCTCCTTCATCTTGATCTTTCCAAGAACAATTTGG 1304
|| || |||||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct 1245 CTACATCTATATCAAAGCTAGTCAACCTCCTTTATCTTGATCTTTCCAACAACAATTTGG 1304
Query 1305 AAGGTGAAGTACCAGCTTGCTTATGGAGATTGAATACAATGGTGCTTTCTCACAAT-TCT 1363
||||||||||||||| ||||||||||||| ||| ||| ||| ||||||||||||| | |
Sbjct 1305 AAGGTGAAGTACCAGGTTGCTTATGGAGAATGAGTACGGTGGCGCTTTCTCACAATAT-T 1363
Query 1364 TTCAGC-AGTTTTGAAAACACTTCACAAGAGGAAGCACTGATCGAAGAGTTGGATTTGAA 1422
|||| | |||||||||||| ||| | | | |||||||| || |||||||||||| ||||
Sbjct 1364 TTCA-CAAGTTTTGAAAACTCTT--C-ATATGAAGCACTAATAGAAGAGTTGGATCTGAA 1419
Query 1423 TTCAAATTCATTCCAAGGACCAATTCCTTATATGATCTGCAAGCTTAGTTCGTTAGGCTT 1482
||| |||||||| ||||||||| ||||| ||||||||||||||||||| |||||| ||||
Sbjct 1420 TTCCAATTCATTTCAAGGACCACTTCCTCATATGATCTGCAAGCTTAGATCGTTACGCTT 1479
Query 1483 TCTAGATTTGTCCAACAATCTCTTCAGCGGCTCGATTCCTTCATGTATAAGGAACTTCAG 1542
| ||||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct 1480 TTTAGATCTGTCCAACAATCTCTTCAGCGGCTCAATTCCTTCATGTATAAGGAATTTCAG 1539
Query 1543 TGGTTCTATTAAAGAGCTAAATTTGGGGGA-CAACAACTTCAGTGGAACTCTTCCAGATA 1601
|||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||
Sbjct 1540 TGGTTCTATTAAAGAGCTAAATAT-GGGGAGCAACAACTTCAGTGGAACTCTTCCAGATA 1598
Query 1602 TATTTTCCAAAGCTACCGAGTTGGTATCATTAGACGTTAGTCACAACCAGCTGGAGGGAA 1661
|||||||||||||||||||||| |||||| | |||||||||| |||||||||||||||||
Sbjct 1599 TATTTTCCAAAGCTACCGAGTTAGTATCAATGGACGTTAGTCGCAACCAGCTGGAGGGAA 1658
Query 1662 AGTTTCCAAAGTCTTTGATCAATTGCAAAGCTTTGGAACTTGTGAATGTGGAAAGCAACA 1721
|||| ||||||||||||||||||||||||||| || ||||||||||| | |||||||||
Sbjct 1659 AGTTGCCAAAGTCTTTGATCAATTGCAAAGCTCTGCAACTTGTGAATATAAAAAGCAACA 1718
Query 1722 AAATCAAGGATATATTTCC-ATCATGGTTGGAATCTCTACCGTCATTACATGTTCTCAAC 1780
|||||||||| | |||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct 1719 AAATCAAGGACA-ATTTCCCATCATGGTTGGAATCTCTACCGTCATTACATGTCCTCAAC 1777
Query 1781 CTCAGATCAAACAAGTTCTATGGGCCGTTGTATCATCG--ACATGCATCTATTGGGTTTC 1838
||| |||||||| |||||||||||||||||||||||| ||||| |||||||||||||
Sbjct 1778 CTCGGATCAAACGAGTTCTATGGGCCGTTGTATCATCACCACATG--TCTATTGGGTTTC 1835
Query 1839 AGAGTTTAAG-GATCATCGATATATCACACAATAACTTCAGTGGAACTCTCCCACCTTAC 1897
|||||||||| | |||||||||||||| ||||| |||||| |||||||||||||||| ||
Sbjct 1836 AGAGTTTAAGAG-TCATCGATATATCAGACAATGACTTCACTGGAACTCTCCCACCTCAC 1894
Query 1898 TATTTTTCCAACTGGAAAGACATGACCACATTAACAGAAGAAATGGACCAGTACATGACA 1957
||||| |||||||||||||| |||| ||||||||| |||||||||||| |||||||||||
Sbjct 1895 TATTTCTCCAACTGGAAAGAAATGATCACATTAACGGAAGAAATGGACGAGTACATGACA 1954
Query 1958 GAGTTTTGGAGATATGCTGATAGCTATTACCATGAGATGGAAATGGTGAATAAAGGAGTT 2017
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1955 GAGTTTTGGAGATATGCTGATAGCTATTATCATGAGATGGAAATGGTGAATAAAGGAGTT 2014
Query 2018 GATATGAGCTTTGAGCGGATCCGAAGAGACTTCAGAGCCATTGATTTTTCTGGAAACAAA 2077
||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2015 GATATGAGCTTCGAGCGGATCCGAAAAGACTTCAGAGCCATTGATTTTTCTGGAAACAAA 2074
Query 2078 ATCAATGGTAATATCCCT-GAATCCCTTGGCTATTTGAAAGAACTGCGGGTTCTCAACTT 2136
||| |||| | |||||| || |||||||||| |||||| |||||||| ||||||| ||
Sbjct 2075 ATCTATGGCAGCATCCCTAGA-TCCCTTGGCTTTTTGAAGGAACTGCGCCTTCTCAATTT 2133
Query 2137 GTCAGGTAACGCATTCACAAGCG-TCATCCCACGATTCTTGGCGAATTTGACAAAGCTGG 2195
|||||||||||| ||| |||||| | |||||||| |||||||| |||||||||||||| |
Sbjct 2134 GTCAGGTAACGCTTTCTCAAGCGAT-ATCCCACGTTTCTTGGCAAATTTGACAAAGCTCG 2192
Query 2196 AGACATTAGACATATCCCGTAATAAGCTGTCAGGTCAAATCCCTCAAGATCTTGCTGCAC 2255
|||| |||||| |||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct 2193 AGACGTTAGACCTATCCCGTAATAAGCTGTCAGGTCAAATCCCTCAAGATCTTGGTAAAC 2252
Query 2256 TCTCTTTTCTGTCATACATGAACTTCTCCCATAACCTTCTCCAAGGTCCAGTGCCACGAG 2315
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2253 TCTCTTTTCTGTCATACATGAACTTCTCCCATAACCTTCTCCAAGGTCCTGTGCCACGAG 2312
Query 2316 GCACACAGTTTCAAAGGCAGAAATGTTCTTCATTCTTGGACAACCCTGGACTCTACGGTC 2375
||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct 2313 GCACACAGTTTCAAAGGCAAAAATGTTCTTCATTCTTGGACAACCCTAAACTCTACGGTC 2372
Query 2376 TCGAAGATATTTGTAGG-GATACTGGTGCCTTGAATCCTACATCGCAGCTACCCGAGGAC 2434
||||||| || ||| || || ||| ||||||||||||||||||||| |||||||||||
Sbjct 2373 TCGAAGAAATCTGT-GGAGAAACTCATGCCTTGAATCCTACATCGCAACTACCCGAGGAA 2431
Query 2435 TTGTCAGAGGCTGAGGA-AAACATGTTCAACTGGGTAGCAGCTGCAATAGCCTATGGACC 2493
||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||
Sbjct 2432 TTGTCAGAGGCTGAGGAGAAA-ATGTTCAACTGGGTAGCAGCTGCAATAGCTTATGGACC 2490
Query 2494 TGGCGTGTTATGTGGATTGGTGATCGGACATTTCTACACTTCACACAATCATGAGTGGTT 2553
||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct 2491 TGGTGTGTTATGTGGATTGGTGATCGGACATATCTTCACTTCACACAATCATGAGTGGTT 2550
Query 2554 CACAGAAAAGTTTG 2567
|||||||| |||||
Sbjct 2551 CACAGAAATGTTTG 2564
Score = 165 bits (89), Expect = 2e-39
Identities = 211/264 (80%), Gaps = 32/264 (12%)
Strand=Plus/Plus
Query 583 AGGAGAGATTCCTTCTTCACTAGGAAACCTTTCTCGTCTCGTAAACCTTG--AGC-TTTT 639
||||||||||||||||||||||||||||||||||| |||| | || ||| | | ||||
Sbjct 439 AGGAGAGATTCCTTCTTCACTAGGAAACCTTTCTCATCTC--ACAC-TTGTTAACCTTTT 495
Query 640 -TTCTAAT-AGATTGGTTGGT-AAGATTCCAGATTCAATAGG-AGATCTAAAGCAGCTAA 695
|| |||| | |||||| || || ||||| | |||||| || | ||||||| |||||||
Sbjct 496 CTT-TAATCA-ATTGGTAGGAGAA-ATTCCGGCTTCAATCGGCA-ATCTAAACCAGCTAA 551
Query 696 GAAACCTTAGCCTTGC-GTCTAACAATCTCATAGGCGAGATTCCTTCTTC-CTTAGGAAA 753
|| |||||| |||| | ||||||| |||||| ||| |||||||||||||| || ||||||
Sbjct 552 GATACCTTAACCTT-CAGTCTAACGATCTCACAGGAGAGATTCCTTCTTCACT-AGGAAA 609
Query 754 CCTTTCTAATCTCGTACATCTTGTT--CTTA-C-GCATAATCAA-TTGGTAGGTGAAG-T 807
||||||| |||| |||| ||||| | || | | ||||| | ||||||||| ||| |
Sbjct 610 CCTTTCTCGTCTC--ACAT-TTGTTAGCCTAGCTG-ATAAT-ATCTTGGTAGGT-AAGAT 663
Query 808 TCCTGCCTCCAT-AGGAAATCTAA 830
||| | || || |||||||||||
Sbjct 664 TCCAGATTC-ATTAGGAAATCTAA 686
Score = 154 bits (83), Expect = 3e-36
Identities = 217/278 (78%), Gaps = 24/278 (9%)
Strand=Plus/Plus
Query 432 ATCTCTAC-GGAGAGATTCCTTCTTCACTAGGAAACCTTTCTCATCTCACACTTGTTAAC 490
||||| || |||||||||||||||||||||||||||||||||| ||||||| |||||| |
Sbjct 576 ATCTC-ACAGGAGAGATTCCTTCTTCACTAGGAAACCTTTCTCGTCTCACATTTGTTAGC 634
Query 491 CTTTA-CT-TTAATAAGTTTGTTGGAGAA-ATTCCGGCTTCAATCGGCAATCTAAACCAG 547
| || || ||||| || || || || ||||| | |||| | || |||||||| ||
Sbjct 635 C--TAGCTGATAATATCTTGGTAGG-TAAGATTCCAGATTCATTAGGAAATCTAAAGCAT 691
Query 548 CTTAGACACCTTA-TCCTT-GCTAATAACG-TCCTTACAGGAGAGATTCCTTCTTCACTA 604
|| ||| |||||| | ||| | | ||||| | || ||||||||||||||||||||||||
Sbjct 692 CTAAGAAACCTTAGT-CTTGGGT-CTAACGAT-CTCACAGGAGAGATTCCTTCTTCACTA 748
Query 605 GGAAACCTTTCTCGTCTCGTAAACCTTG-AGCTTTTTTC-TAAT-AGATTGGTTGGT-AA 660
|||||||||||| ||| || | |||| | ||| | | |||| | |||||| ||| ||
Sbjct 749 GGAAACCTTTCTAATCTTATACATCTTGCA-CTTATG-CATAATCA-ATTGGTAGGTGAA 805
Query 661 GATTCCAGATTCAATAGGAGATCTAAA-GCAGCTAAGA 697
| |||| | || || ||| ||||||| | | ||||||
Sbjct 806 G-TTCCTGCCTCCATTGGAAATCTAAACGAA-CTAAGA 841
Score = 71.3 bits (38), Expect = 4e-11
Identities = 92/117 (79%), Gaps = 8/117 (7%)
Strand=Plus/Plus
Query 432 ATCTCTAC-GGAGAGATTCCTTCTTCACTAGGAAACCTTTCTCATCTCACACTTGTTA-A 489
||||| || ||||||||||||||||||||||||||||||||| |||| | || | || |
Sbjct 720 ATCTC-ACAGGAGAGATTCCTTCTTCACTAGGAAACCTTTCTAATCTTATACATCTTGCA 778
Query 490 CCTT-TACTTTAAT-AAGTTTGTTGGAGAAATTCCGGCTTCAATCGGCAATCTAAAC 544
| || | | | ||| || || || || ||| |||| || || || || |||||||||
Sbjct 779 C-TTATGCAT-AATCAA-TTGGTAGGTGAAGTTCCTGCCTCCATTGGAAATCTAAAC 832
> Ahg476271 jgi|Araly1|476271|fgenesh2_kg.2__1401__AT1G71400.1
Length=2659
Score = 3221 bits (1744), Expect = 0.0
Identities = 2384/2681 (89%), Gaps = 91/2681 (3%)
Strand=Plus/Plus
Query 1 TTCTTCTTAAAGAGAGAACC-ACTGAA--TCACACAATTCAGTACTCACTACACAATCTC 57
|||||||||||| ||| ||| | |||| ||||||||||| |||| || | |||| ||
Sbjct 1 TTCTTCTTAAAGTGAGGACCAAATGAAGCACACACAATTCATTACTTACAAGACAAAATC 60
Query 58 AAAACAGAAAGATATGATGATCCGAAGCCATCGTCATTGGGTTTTTTCTAGTCGTATTAT 117
||||||||||||||||||||||||||||||| |||||||||||| | || | ||||||
Sbjct 61 AAAACAGAAAGATATGATGATCCGAAGCCATTGTCATTGGGTTTCTGATA-T--TATTAT 117
Query 118 CATCTTTCTCTCCCTCCTTGTTCACTCTCTAGCTTCTTCTTCGCCCCACTTTTGCCGTGA 177
||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||| |
Sbjct 118 CATCTTTTTCTTCCTCCTTGTACACTCTCTAGCTTCTTCTTCGCCCCACTTTTGCCGTCA 177
Query 178 TGACCAGAGAGATGCTCTTTTGGAATTCAGAGGCGAGTTTCCGATAAATGCGTCATGGCA 237
|||||||||||||||||||||||||||||||||||||||||||||| |||| | ||
Sbjct 178 TGACCAGAGAGATGCTCTTTTGGAATTCAGAGGCGAGTTTCCGATAGATGC---A-GG-- 231
Query 238 TATTATG-AATCAATGGAG-AGGTCCGTGGAATAAGAGCACTGATTGTTGTCTTTGGAAT 295
| || ||| || | || | | || | | || ||||| | || ||||
Sbjct 232 TCCG-TGGAAT-AA-G-AGCA---C--TG-A-T--------TG-TTGTT-T-TT-GGAAC 268
Query 296 GGAGTCACTTGCAATGATAAATCTGGTCAGGTAATATCACTCGACATTCCTAACACCTTT 355
|||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 269 GGAGTCACATGCGATGATAAATCTGGTCAGGTAATATCACTCGACCTTCCTAACACCTTT 328
Query 356 CTCAACAACTATTTGAAAACCAACAGTAGCCTTTTTAAACTCCAATATCTTCGTCACCTA 415
||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 329 CTCCACGGCTATTTGAAAACCAACAGTAGCCTTTTTAAACTCCAATATCTTCGTCACCTA 388
Query 416 GACCTTACG-AATTGCAATCTCTACGGAGAGATTCCTTCTTCACTAGGAAACCTTTCTCA 474
|||||| | |||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct 389 AACCTTA-GTAATTGCAATCTCAAAGGAGAGATTCCTTCTTCACTAGGAAACCTTTCTCA 447
Query 475 TCTCACACTTGTTAACCTTTACTTTAAT-AAGTTTGTTGGAGAAATTCCGGCTTCAATCG 533
|||||||||||||||||||| ||||||| || || || ||||||||||||||||||||||
Sbjct 448 TCTCACACTTGTTAACCTTTTCTTTAATCAA-TTGGTAGGAGAAATTCCGGCTTCAATCG 506
Query 534 GCAATCTAAACCAGCTTAGACACCTTATCCTTGCTAAT--AACG-TCCTTACAGGAGAGA 590
|||||||||||||||| ||| |||||| |||| | | | |||| || | ||||||||||
Sbjct 507 GCAATCTAAACCAGCTAAGATACCTTAACCTT-C-AGTCTAACGATC-TCACAGGAGAGA 563
Query 591 TTCCTTCTTCACTAGGAAACCTTTCTCGTCTCGTAAACCTTGAGCTTTTTTC-TAATAGA 649
|||||||||||||||||||||||||||||||| | || ||| | | |||||
Sbjct 564 TTCCTTCTTCACTAGGAAACCTTTCTCGTCTCACATTTGTT-AGCCTAGCTGATAATATC 622
Query 650 TTGGTTGGTAAGATTCCAGATTCAATAGGAGATCTAAAGCAGCTAAGAAACCTTAGCCTT 709
||||| |||||||||||||||||| ||||| |||||||||| |||||||||||||| |||
Sbjct 623 TTGGTAGGTAAGATTCCAGATTCATTAGGAAATCTAAAGCATCTAAGAAACCTTAGTCTT 682
Query 710 GCGTCTAACAATCTCATAGGCGAGATTCCTTCTTC-CTTAGGAAACCTTTCTAATCTCGT 768
| ||||||| |||||| ||| |||||||||||||| || ||||||||||||||||||| |
Sbjct 683 GGGTCTAACGATCTCACAGGAGAGATTCCTTCTTCACT-AGGAAACCTTTCTAATCTCAT 741
Query 769 ACATCTTGTTCTTACGCATAATCAATTGGTAGGTGAAGTTCCTGCCTCCATAGGAAATCT 828
|||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 742 ACATCTTGCACTTATGCATAATCAATTGGTAGGTGAAGTTCCTGCCTCCATTGGAAATCT 801
Query 829 AATCGAACTAAGAGTTATGTCATTTGAAAACAATAGCTTAAGTGGCAACATTCCTATTTC 888
|| ||||||||||| |||||||||||||||||||||||||||||| || |||||||||||
Sbjct 802 AAACGAACTAAGAGCTATGTCATTTGAAAACAATAGCTTAAGTGGAAATATTCCTATTTC 861
Query 889 CTTCGCCAATTTAACAAAGCTTTCT-ATATTTGTCCTCAGCTCTAATAACTTCACATCCA 947
||| ||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||
Sbjct 862 CTTTGCCAATTTAACCAAGCTTTCTGA-ATTTGTCCTCAGCTCTAATAACTTCACATCCA 920
Query 948 CGTTTCCATTTGACATGAGTATATTCCACAACTTGGAGTACTTTGATGTTTCTTATAACT 1007
||||||| |||||||||||| ||||||||||||||| ||||||||||| |||| | ||||
Sbjct 921 CGTTTCCGTTTGACATGAGTCTATTCCACAACTTGGTGTACTTTGATGCTTCTCAAAACT 980
Query 1008 CATTTAGCGGGCCTTTTCCTAAATCTCTGTTATTGATTCCTTCCTTAGAATCTATTTATC 1067
| |||||||| ||||| ||||||||| |||| ||||| |||| ||| || | ||||||
Sbjct 981 CTTTTAGCGGACCTTTCCCTAAATCTTTGTTCTTGATAACTTCGTTACAAGATGTTTATC 1040
Query 1068 TG-CAAGAAAACCAATTTACGGGACCTATAGAGTTTGCAAATACATCTTCATCAACTAAG 1126
|| || || |||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1041 TGGCA-GATAACCAATTTACGGGACCTATAGAGTTTGCAAATACATCTTCATCAAATAAG 1099
Query 1127 CTTCAGGACCTAATCCTTGGTCGTAACAGACTCCATGGCCCAATCCCGGAATCTATATCT 1186
|||||| ||||| ||||| |||||||||||| ||||||||||||||||||| ||||||
Sbjct 1100 CTTCAGTCCCTAACCCTTGCTCGTAACAGACTTGATGGCCCAATCCCGGAATCCATATCT 1159
Query 1187 AGACTTCTCAACCTTGAAGAGCTAGATATCAGCCACAACAACTTTACTGGGGCAATCCCT 1246
| | |||||||||||||||| ||||| | |||||||||||||| |||||||||||||||
Sbjct 1160 AAATTTCTCAACCTTGAAGATTTAGATCTTAGCCACAACAACTTCACTGGGGCAATCCCT 1219
Query 1247 CCAACTATATCAAAGCTAGTCAACCTCCTTCATCTTGATCTTTCCAAGAACAATTTGGAA 1306
|| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||
Sbjct 1220 ACATCTATATCAAAGCTAGTCAACCTCCTTTATCTTGATCTTTCCAACAACAATTTGGAA 1279
Query 1307 GGTGAAGTACCAGCTTGCTTATGGAGATTGAATACAATGGTGCTTTCTCACAAT-TCTTT 1365
|| |||||||||| ||||||||||||||||||||| ||| ||||||||||||| | |||
Sbjct 1280 GGCGAAGTACCAGGTTGCTTATGGAGATTGAATACGGTGGCGCTTTCTCACAATAT-TTT 1338
Query 1366 CAGCA-GTTTTGAAAACACTTCACAAGAGGAAGCACTGATCGAAGAGTTGGATTTGAATT 1424
|| || ||||||| ||| ||||| | || | ||||| || |||||||||||| ||||||
Sbjct 1339 CA-CAAGTTTTGAGAACTCTTCATATGA--A-GCACTAATAGAAGAGTTGGATCTGAATT 1394
Query 1425 CAAATTCATTCCAAGGACCAATTCCTTATATGATCTGCAAGCTTAGTTCGTTAGGCTTTC 1484
| |||||||| ||||||||| ||||| ||||||||||||||||||| |||||| |||||
Sbjct 1395 CCAATTCATTTCAAGGACCACTTCCTCATATGATCTGCAAGCTTAGATCGTTACGCTTTT 1454
Query 1485 TAGATTTGTCCAACAATCTCTTCAGCGGCTCGATTCCTTCATGTATAAGGAACTTCAGTG 1544
||||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct 1455 TAGATCTGTCCAACAATCTCTTCAGCGGCTCAATTCCTTCATGTATAAGGAATTTCAGTG 1514
Query 1545 GTTCTATTAAAGAGCTAAATTTGGGG-GACAACAACTTCAGTGGAACTCTTCCAGATATA 1603
|||||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||
Sbjct 1515 GTTCTATTAAAGAGCTAAATATGGGGAG-CAACAACTTCAGTGGAACTCTTCCAGATATA 1573
Query 1604 TTTTCCAAAGCTACCGAGTTGGTATCATTAGACGTTAGTCACAACCAGCTGGAGGGAAAG 1663
|||||||||||||||||||| |||||| | |||||||||| |||||||||||||||||||
Sbjct 1574 TTTTCCAAAGCTACCGAGTTAGTATCAATGGACGTTAGTCGCAACCAGCTGGAGGGAAAG 1633
Query 1664 TTTCCAAAGTCTTTGATCAATTGCAAAGCTTTGGAACTTGTGAATGTGGAAAGCAACAAA 1723
|| ||||||||||||||||||||||||||| || ||||||||||| | |||||||||||
Sbjct 1634 TTGCCAAAGTCTTTGATCAATTGCAAAGCTCTGCAACTTGTGAATATAAAAAGCAACAAA 1693
Query 1724 ATCAAGGATATATTTCC-ATCATGGTTGGAATCTCTACCGTCATTACATGTTCTCAACCT 1782
|||||||| | |||||| ||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1694 ATCAAGGACA-ATTTCCCATCATGGTTGGAATCTCTACCGTCATTACATGTCCTCAACCT 1752
Query 1783 CAGATCAAACAAGTTCTATGGGCCGTTGTATCATCG--ACATGCATCTATTGGGTTTCAG 1840
| |||||||| |||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct 1753 CGGATCAAACGAGTTCTATGGGCCGTTGTATCATCACCACATG--TCTATTGGGTTTCAG 1810
Query 1841 AGTTTAAG-GATCATCGATATATCACACAATAACTTCAGTGGAACTCTCCCACCTTACTA 1899
|||||||| | |||||||||||||| ||||| |||||| |||||||||||||||| ||||
Sbjct 1811 AGTTTAAGAG-TCATCGATATATCAGACAATGACTTCACTGGAACTCTCCCACCTCACTA 1869
Query 1900 TTTTTCCAACTGGAAAGACATGACCACATTAACAGAAGAAATGGACCAGTACATGACAGA 1959
||| |||||||||||||| |||| ||||||||| |||||||||||| |||||||||||||
Sbjct 1870 TTTCTCCAACTGGAAAGAAATGATCACATTAACGGAAGAAATGGACGAGTACATGACAGA 1929
Query 1960 GTTTTGGAGATATGCTGATAGCTATTACCATGAGATGGAAATGGTGAATAAAGGAGTTGA 2019
||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 1930 GTTTTGGAGATATGCTGATAGTTATTATCATGAGATGGAAATGGTGAATAAAGGAGTTGA 1989
Query 2020 TATGAGCTTTGAGCGGATCCGAAGAGACTTCAGAGCCATTGATTTTTCTGGAAACAAAAT 2079
||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1990 TATGAGCTTCGAGCGGATCCGAAAAGACTTCAGAGCCATTGATTTTTCTGGAAACAAAAT 2049
Query 2080 CAATGGTAATATCCCT-GAATCCCTTGGCTATTTGAAAGAACTGCGGGTTCTCAACTTGT 2138
| |||| | |||||| || |||||||||| |||||| |||||||| ||||||| ||||
Sbjct 2050 CTATGGCAGCATCCCTAGA-TCCCTTGGCTTTTTGAAGGAACTGCGCCTTCTCAATTTGT 2108
Query 2139 CAGGTAACGCATTCACAAGCG-TCATCCCACGATTCTTGGCGAATTTGACAAAGCTGGAG 2197
|||||||||| ||| |||||| | |||||||| |||||||| |||||||||||||| |||
Sbjct 2109 CAGGTAACGCTTTCTCAAGCGAT-ATCCCACGTTTCTTGGCAAATTTGACAAAGCTCGAG 2167
Query 2198 ACATTAGACATATCCCGTAATAAGCTGTCAGGTCAAATCCCTCAAGATCTTGCTGCACTC 2257
|| |||||| |||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct 2168 ACGTTAGACCTATCCCGTAATAAGCTGTCAGGTCAAATCCCTCAAGATCTTGGTAAACTC 2227
Query 2258 TCTTTTCTGTCATACATGAACTTCTCCCATAACCTTCTCCAAGGTCCAGTGCCACGAGGC 2317
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2228 TCTTTTCTGTCATACATGAACTTCTCCCATAACCTTCTCCAAGGTCCTGTGCCACGAGGC 2287
Query 2318 ACACAGTTTCAAAGGCAGAAATGTTCTTCATTCTTGGACAACCCTGGACTCTACGGTCTC 2377
||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||
Sbjct 2288 ACACAGTTTCAAAGGCAAAAATGTTCTTCATTCTTGGACAACCCTAAACTCTACGGTCTC 2347
Query 2378 GAAGATATTTGTAGG-GATACTGGTGCCTTGAATCCTACATCGCAGCTACCCGAGGACTT 2436
||||| || ||| || || ||| ||||||||||||||||||||| ||||||||||| ||
Sbjct 2348 GAAGAAATCTGT-GGAGAAACTCATGCCTTGAATCCTACATCGCAACTACCCGAGGAATT 2406
Query 2437 GTCAGAGGCTGAGGA-AAACATGTTCAACTGGGTAGCAGCTGCAATAGCCTATGGACCTG 2495
||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct 2407 GTCAGAGGCTGAGGAGAAA-ATGTTCAACTGGGTAGCAGCTGCAATAGCTTATGGACCTG 2465
Query 2496 GCGTGTTATGTGGATTGGTGATCGGACATTTCTACACTTCACACAATCATGAGTGGTTCA 2555
| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct 2466 GTGTGTTATGTGGATTGGTGATCGGACATATCTTCACTTCACACAATCATGAGTGGTTCA 2525
Query 2556 CAGAAAAGTTTGGTAGAAAACAACACAAAGCCCTTACAAGTGTG-A--AGTGT--TCTCT 2610
|||||| ||||||| |||| || || | | | |||||||||| | | ||| |||||
Sbjct 2526 CAGAAATGTTTGGTCGAAAG-AA-ACTA-GTCATTACAAGTGTTCATTAATGTAGTCTCT 2582
Query 2611 TTAA---GCGTTTGTGAAGCAAATGTTGTGTAACGTCTTGT 2648
|||| || |||||||||||| ||||||||||||||||||
Sbjct 2583 TTAATAAGCATTTGTGAAGCAACTGTTGTGTAACGTCTTGT 2623
Score = 165 bits (89), Expect = 2e-39
Identities = 211/264 (80%), Gaps = 32/264 (12%)
Strand=Plus/Plus
Query 583 AGGAGAGATTCCTTCTTCACTAGGAAACCTTTCTCGTCTCGTAAACCTTG--AGC-TTTT 639
||||||||||||||||||||||||||||||||||| |||| | || ||| | | ||||
Sbjct 412 AGGAGAGATTCCTTCTTCACTAGGAAACCTTTCTCATCTC--ACAC-TTGTTAACCTTTT 468
Query 640 -TTCTAAT-AGATTGGTTGGT-AAGATTCCAGATTCAATAGG-AGATCTAAAGCAGCTAA 695
|| |||| | |||||| || || ||||| | |||||| || | ||||||| |||||||
Sbjct 469 CTT-TAATCA-ATTGGTAGGAGAA-ATTCCGGCTTCAATCGGCA-ATCTAAACCAGCTAA 524
Query 696 GAAACCTTAGCCTTGC-GTCTAACAATCTCATAGGCGAGATTCCTTCTTC-CTTAGGAAA 753
|| |||||| |||| | ||||||| |||||| ||| |||||||||||||| || ||||||
Sbjct 525 GATACCTTAACCTT-CAGTCTAACGATCTCACAGGAGAGATTCCTTCTTCACT-AGGAAA 582
Query 754 CCTTTCTAATCTCGTACATCTTGTT--CTTA-C-GCATAATCAA-TTGGTAGGTGAAG-T 807
||||||| |||| |||| ||||| | || | | ||||| | ||||||||| ||| |
Sbjct 583 CCTTTCTCGTCTC--ACAT-TTGTTAGCCTAGCTG-ATAAT-ATCTTGGTAGGT-AAGAT 636
Query 808 TCCTGCCTCCAT-AGGAAATCTAA 830
||| | || || |||||||||||
Sbjct 637 TCCAGATTC-ATTAGGAAATCTAA 659
Score = 159 bits (86), Expect = 7e-38
Identities = 217/277 (78%), Gaps = 22/277 (8%)
Strand=Plus/Plus
Query 432 ATCTCTAC-GGAGAGATTCCTTCTTCACTAGGAAACCTTTCTCATCTCACACTTGTTAAC 490
||||| || |||||||||||||||||||||||||||||||||| ||||||| |||||| |
Sbjct 549 ATCTC-ACAGGAGAGATTCCTTCTTCACTAGGAAACCTTTCTCGTCTCACATTTGTTAGC 607
Query 491 CTTTACTT-TAATAAGTTTGTTGGAGAA-ATTCCGGCTTCAATCGGCAATCTAAACCAGC 548
|| || ||||| || || || || ||||| | |||| | || |||||||| || |
Sbjct 608 CTAG-CTGATAATATCTTGGTAGGT-AAGATTCCAGATTCATTAGGAAATCTAAAGCATC 665
Query 549 TTAGACACCTTA-TCCTTGC-TAATAACG-TCCTTACAGGAGAGATTCCTTCTTCACTAG 605
| ||| |||||| || ||| | ||||| || | |||||||||||||||||||||||||
Sbjct 666 TAAGAAACCTTAGTC-TTGGGTC-TAACGATC-TCACAGGAGAGATTCCTTCTTCACTAG 722
Query 606 GAAACCTTTCTCGTCTCGTAAACCTTG-AGCTTTTTTC-TAAT-AGATTGGTTGGT-AAG 661
||||||||||| |||| || | |||| | ||| | | |||| | |||||| ||| |||
Sbjct 723 GAAACCTTTCTAATCTCATACATCTTGCA-CTTATG-CATAATCA-ATTGGTAGGTGAAG 779
Query 662 ATTCCAGATTCAATAGGAGATCTAAA-GCAGCTAAGA 697
|||| | || || ||| ||||||| | | ||||||
Sbjct 780 -TTCCTGCCTCCATTGGAAATCTAAACGAA-CTAAGA 814
Score = 76.8 bits (41), Expect = 8e-13
Identities = 93/117 (79%), Gaps = 8/117 (7%)
Strand=Plus/Plus
Query 432 ATCTCTAC-GGAGAGATTCCTTCTTCACTAGGAAACCTTTCTCATCTCACACTTGTTA-A 489
||||| || ||||||||||||||||||||||||||||||||| |||||| || | || |
Sbjct 693 ATCTC-ACAGGAGAGATTCCTTCTTCACTAGGAAACCTTTCTAATCTCATACATCTTGCA 751
Query 490 CCTT-TACTTTAAT-AAGTTTGTTGGAGAAATTCCGGCTTCAATCGGCAATCTAAAC 544
| || | | | ||| || || || || ||| |||| || || || || |||||||||
Sbjct 752 C-TTATGCAT-AATCAA-TTGGTAGGTGAAGTTCCTGCCTCCATTGGAAATCTAAAC 805
> Ahg476270 jgi|Araly1|476270|fgenesh2_kg.2__1400__AT1G71390.1
Length=2307
Score = 1232 bits (667), Expect = 0.0
Identities = 1365/1691 (81%), Gaps = 92/1691 (5%)
Strand=Plus/Plus
Query 931 TAAT-AACTTCACATCCACGTTTCCATTTGACATGAGTATATTCCACAACTTGGAGTAC- 988
|||| |||||||||| ||| |||||| |||||||||| | ||||| ||||||| | ||
Sbjct 641 TAATAAACTTCACAT-CAC--TTCCATCTGACATGAGTGTCTTCCAAAACTTGGTG-ACT 696
Query 989 TTTGATGTTTCT-TATAACTCATTTAGCGGGCCTTTTCCTAAATCTCTGTTATTGATTCC 1047
|||||| || | | ||||||||| ||||||| | |||| |||| | || | ||||||
Sbjct 697 TTTGATATTAGTGCA-AACTCATTTTTCGGGCCTATCCCTACATCTTTATTCTCGATTCC 755
Query 1048 TTCCTTAGA-ATCT-ATTTATCTGCA-AGAAAACCAATTTACGGGACCTATAGAGTTTGC 1104
||| ||| | || | ||||| || | || ||||||||| || |||||||||||||||||
Sbjct 756 TTCGTTA-ACAT-TGGTTTATATGGATAG-AAACCAATTCACAGGACCTATAGAGTTTGC 812
Query 1105 AAATACATCTTCATCAACTAAGCTTCAGGACCTAATCCTTGGTCGTAACAGACTCCATGG 1164
|||| |||||||||| ||||||||||| | ||||| ||| || |||| || | ||||
Sbjct 813 TAATATATCTTCATCATCTAAGCTTCAGAATCTAATTCTTACTCATAACCGATTAGATGG 872
Query 1165 CCCAATCCCGGAATCTATATCTAGACTTCTCAACCTTGAAGAGCTAGATATCAG-CCACA 1223
||||||||| ||||| ||||| | | |||||||||| | || | ||||| | | |||||
Sbjct 873 CCCAATCCCTGAATCCATATCGAAATTTCTCAACCTCGTAGTGTTAGATGT-TGCCCACA 931
Query 1224 ACAACT-TTACTGGGGCAATCCCTCCAACTATATCAAAGCTAGTCAACCTCCTTCAT-CT 1281
|||| | | | ||| |||||||| |||| |||||| |||| ||||||| | || |
Sbjct 932 ACAA-TATCAGTGGACCAATCCCTAGGTCTATGTCAAAGTTAGTTAACCTCCAT-ATGTT 989
Query 1282 TGATCTTTCCAAGAACAATTTGGAAGGTGAAGTACC-AGCTTGCTTATGGAGATTG-AAT 1339
|| | ||||||| ||||| ||||||||||| ||||| || ||| || ||||||||| |
Sbjct 990 TGGTTTTTCCAACAACAAGTTGGAAGGTGAGGTACCAAG-TTGGTTGTGGAGATTGTCGT 1048
Query 1340 ACAATGGTGCTTTCTCACAATTCTTTCAGCAGTTTTG--AAAACA-CTTCACAAGAGGAA 1396
|| | |||| |||||||||||||| |||||||||| |||| | ||||| || | |||
Sbjct 1049 -CAGCGATGCTGTCTCACAATTCTTTTAGCAGTTTTGAAAAAATATCTTCA-AA-A-GAA 1104
Query 1397 GCACTGATCGAAGAGTTGGATTTGA-ATTCAAATTCATTCCAAGGACCAATTCCTTATAT 1455
|||||||| ||| ||||||| ||| ||| |||||||||| ||||||| |||| || |
Sbjct 1105 ACACTGATCCAAGTGTTGGATCTGAGTTTC-AATTCATTCCGAGGACCATTTCC-CATTT 1162
Query 1456 -GATCTGCAAGCTTAGTTCGTTAGGCTTTC-TAGATTTGTCCAACAATCTCTTCAGCGGC 1513
||||||| |||| | |||| | ||| |||||||||||||||||||||||| ||||
Sbjct 1163 GGATCTGCGAGCTGAAAGGGTTACAC-TTCTTAGATTTGTCCAACAATCTCTTCAACGGC 1221
Query 1514 TCGATTCCTTCATGTATAAGGAACTTCAGTGGTTCTATTAAAGAGCTAAATT-TGGGGGA 1572
|||||||||| |||| ||||||| |||| || | | | ||| |||| | ||| |
Sbjct 1222 TCGATTCCTTTATGTTTAAGGAATTTCA----ATC--TCACGGGGCT-AATTCTTGGGAA 1274
Query 1573 CAACAACTTCAGTGGAACTC-T--TCCAGATATATTTTCCAAAGCTACCGAGTTGGTATC 1629
|||||||||||||||||||| | ||| ||| ||||||||| |||||| | || |||
Sbjct 1275 CAACAACTTCAGTGGAACTCTTGATCCTGATTTATTTTCCAGTGCTACCAACTTACAATC 1334
Query 1630 ATTAGACGTTAGTCACAACCAGCT-GGAGGGAAAGTTTCCAAAGTCTTTGATCAATTGCA 1688
|| ||||| |||| ||||||||| | |||| |||||||| |||||||||||||| |||
Sbjct 1335 TTTGGACGTAAGTCGCAACCAGCTCGAAGGG-AAGTTTCCCAAGTCTTTGATCAACAGCA 1393
Query 1689 AAGC-TTTGGAACTTGTGAATGTGGAAAGCAACAAAATCAAGGATATA-TTTCCATCATG 1746
|| | | | || ||||||||||||||||||||||||||||||||| | |||||||| ||
Sbjct 1394 AA-CGTCTACAATTTGTGAATGTGGAAAGCAACAAAATCAAGGATA-AGTTTCCATCTTG 1451
Query 1747 GTTGGAATCTCTACCGTCATTACATGTTCTCAACC-TCAGATCAAACAAGTTCTATGGGC 1805
||||| ||||||||| || ||| | ||||||| || || |||||||| ||||||| || |
Sbjct 1452 GTTGGGATCTCTACCATCTTTAAAAGTTCTCATCCTTC-GATCAAACGAGTTCTACGGTC 1510
Query 1806 CGTTGTATCAT--CGACATGCATCTATTGGGTTTCAGAGTTTAAGGATCATCGATATATC 1863
||||||||||| | ||||| || |||||||||||| ||||||| ||||| ||||||||
Sbjct 1511 CGTTGTATCATCCCAACATG--TCCATTGGGTTTCAGGGTTTAAGAATCATTGATATATC 1568
Query 1864 ACACAATAACTTCAGTGGAACTCTCCCACCTTACTATTTTTCCAACTGGAAAGACATGAC 1923
| ||||| ||||| |||||| ||||||||| | | |||||||| ||| || ||||
Sbjct 1569 AAACAATGGCTTCACTGGAACACTCCCACCTCAGTTTTTTTCCAGTTGGCGTGAAATGAT 1628
Query 1924 CACATTA-ACAGA-AGAAATGGACCAGTACA-TGACAGAGTTTTGGAG-A-TATGCTGAT 1978
|||||| | || ||| | || |||||| ||| ||| | | || | | | || |
Sbjct 1629 TACATTAGTC-GATGGAAGT-CACGAGTACATTGA-AGA--TATCCAGAATTTTTCTCTT 1683
Query 1979 AGCTATTA-C-CATGAGATGGAAATGGTGAATAAAGGAGTTGATATGAGCTTTGAGCGGA 2036
| | ||| | | | ||||||||||||||||||||||| || ||||| ||||||||||
Sbjct 1684 A--T-TTATCGC-T-CCATGGAAATGGTGAATAAAGGAGTAGAGATGAGTTTTGAGCGGA 1738
Query 2037 TCCGA-AGAGACTTCAGAGCCATTGATTTTTCTGG-AAACAAAATCA-ATGGTAATATCC 2093
||||| | |||||||||||||||||||||||| || ||||| || | |||| || || |
Sbjct 1739 TCCGACA-AGACTTCAGAGCCATTGATTTTTC-GGAAAACAGGAT-ATATGGGAAAATAC 1795
Query 2094 CTGAATCCCTTGGCTATTTGAAAGAACTGCGGGTTCTCAACTTGTCAGGTAACGCATTCA 2153
|||||||| |||| | |||| | |||||||| |||| ||||||||||||||||| ||||
Sbjct 1796 CTGAATCCATTGGTTGTTTGGAGGAACTGCGTCTTCTTAACTTGTCAGGTAACGCTTTCA 1855
Query 2154 CAAGCG-TCATCCCACGATTCTTGGCGAATTTGACAAAGCTGGAGACATTAGACATATCC 2212
|||||| | |||||||| ||| ||| ||| |||||||||| ||||| |||||| ||||
Sbjct 1856 CAAGCGAT-ATCCCACGGGTCTGGGCAAATCTGACAAAGCTCGAGACGTTAGACCTATCA 1914
Query 2213 CGTAATAAGCTGTCAGGTCAAATCCCTCAAGATCTTGCTGCACTC-TCTTTTCTGTCATA 2271
||||| |||||||||||||||||||| |||||||||| | |||| || |||| ||||||
Sbjct 1915 CGTAACAAGCTGTCAGGTCAAATCCCACAAGATCTTGGTAAACTCTTC-TTTCGGTCATA 1973
Query 2272 CATGAACTTCTCCCATAACCTTCTCCAAGGTCCAGTGCCACGAGGCACACAGTTTCAAAG 2331
|||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||
Sbjct 1974 CATGAACTTCTCTCATAACCTTCTCCAAGGTCCAGTGCCAAGAGGCACGCAGTTTCAAAG 2033
Query 2332 GCAGAAATGTTCTTCATTCTTGGACAACCCTGGACTCTACGGTCTCGAAGATATTTGTAG 2391
||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||| |
Sbjct 2034 GCAGAGATGTTCTTCATTCTTGGACAACCATGGACTCTACGGTCTCGAAGATATCTGTGG 2093
Query 2392 GGATACTGGTG-CCTTGAATCCTACATCGCAGCTACCCGAGGACTTGTCAGAGGCTGAGG 2450
||| ||| || || |||||||||||| |||| ||||||||| |||| ||||| ||| |
Sbjct 2094 GGAAACTCATGTCC-CGAATCCTACATCACAGCAACCCGAGGAGTTGTTAGAGGATGAAG 2152
Query 2451 AAAACATGTTCAACTGGGTAGCAGCTGCAATAGCCTATGGACCTGGCGTGTTATGTGGAT 2510
|||| ||||| ||||||||||||||||||||||||||||||||||| || || || ||||
Sbjct 2153 AAAAAATGTTTAACTGGGTAGCAGCTGCAATAGCCTATGGACCTGGTGTCTTCTGCGGAT 2212
Query 2511 TGGTGATCGGA--CATTTCTACACTTCACACAATCATGAGTGGTTCACAGAAAAGTTTGG 2568
||||||| ||| ||| | | ||||||||| |||||||| |||||| | |||||||| ||
Sbjct 2213 TGGTGATTGGATACATAT-T-CACTTCACATAATCATGAATGGTTCGCTGAAAAGTTCGG 2270
Query 2569 TAGAAAACAAC 2579
| ||||| |||
Sbjct 2271 TCGAAAAAAAC 2281
Score = 401 bits (217), Expect = 1e-110
Identities = 503/633 (79%), Gaps = 51/633 (8%)
Strand=Plus/Plus
Query 80 CGAAGCCATCGTCATTGGGTTTTTTCTAGTCGTATTATCATCT-TTCTCTCCCTCCTTGT 138
||||||||| || ||||||||| || || | ||||| ||||| || ||||||||||| |
Sbjct 7 CGAAGCCATTGTTATTGGGTTTCTTGTA-T--TATTACCATCTATT-TCTCCCTCCTTAT 62
Query 139 TCACTCTCTAGCTTCTT-CTTCGCCCCACTTTTGCCGTGATGACCAGA-GAGATGCTCTT 196
||||||||||||| || ||| || |||||||||||| | ||||| | || | | ||||
Sbjct 63 ACACTCTCTAGCTT-TTCCTTTGCTCCACTTTTGCCGCCACGACCAAAGGA-ACGGTCTT 120
Query 197 TTGGAATTCAGAGGCGAGTTTCCGATAAATGCGTCATGGCATATTATGAATCAATGGAGA 256
||| ||||||||| |||||||||| || | | | | | | | | ||| | |
Sbjct 121 TTGAAATTCAGAGACGAGTTTCCG----AT-C-T--TTG---AGTCT--A--AAT-CA-A 163
Query 257 GGTCCGTGGAATAAGAGCACTGATTGTTGTCTTTGGAATGGAGTCACTTGCAATGATAAA 316
||||||||||| |||||| |||||||||| ||||| | || ||||| ||| ||||||||
Sbjct 164 -GTCCGTGGAATGAGAGCAGTGATTGTTGTTTTTGGGAGGGTGTCACGTGCGATGATAAA 222
Query 317 TCTGGTCAGGTAATATCACTCGACATTCCTAACACCTTTCTCAACAACTATTTGAAAACC 376
||||| ||||| ||||||||| || ||| ||||||| |||||||||||| |||||||||
Sbjct 223 TCTGGCCAGGTGATATCACTCAACCTTCGTAACACCCTTCTCAACAACTCTTTGAAAACT 282
Query 377 AACAGTAGCCTTTTTAAACTCCAATATCTTCGTCACCTAGACCTTACGAATTGCAATCTC 436
||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||
Sbjct 283 AACAGTAGCCTTTTTAAACTCCAATATCTTCGTCACCTAGACCTTTCTAGTTGCAATCTC 342
Query 437 -TACGGAGAGATTCCTTCTTCACTAGGAAACCTTTCTCATCTC--ACA-CTTGTTAACCT 492
|| |||||||||||||||||||||||||||||||||| ||| | | |||| ||| |
Sbjct 343 ATA-GGAGAGATTCCTTCTTCACTAGGAAACCTTTCTCGTCTGGTAAATCTTG--AAC-T 398
Query 493 TTACTT-TAATAAGTTTGTT-GGAGAAATTCCGGCTTCAATCGGCAATCTAAACCAGCTT 550
|| ||| ||||| | ||| | || | ||||||| |||||| ||||| ||||| | ||
Sbjct 399 TT-CTTCTAATA-GATTGGTCGGTGCGATTCCGGATTCAATAGGCAACCTAAAGAATCTA 456
Query 551 AGACACCTTATCCTTGCTA-ATAACG-TCCTTACAGGAGAGATTCCTTCTTC-ACTAGGA 607
||| |||||| ||||| | |||||| || | | |||||| ||||||||||| | |||||
Sbjct 457 AGAAACCTTAGCCTTGG-AGATAACGATC-TCATAGGAGAAATTCCTTCTTCCA-TAGGA 513
Query 608 AACCTTTCTCGTCTCGTAAACCTTGAGCTTTTTTCTAATAGATT-GGTTGGT-AAGATTC 665
|||||||||| |||| || | ||||| |||| |||| ||| ||| ||| ||| |||
Sbjct 514 AACCTTTCTCTTCTCTTAGATCTTGACCTTTGGAGTAATC-ATTTGGTAGGTGAAG-TTC 571
Query 666 CAGATTCAATAGGAGATCTAAA-GCAGCTAAGA 697
|| ||| || ||| | ||||| | | ||||||
Sbjct 572 CATCTTCCATCGGAAACCTAAACGAA-CTAAGA 603
Score = 283 bits (153), Expect = 4e-75
Identities = 237/277 (86%), Gaps = 8/277 (3%)
Strand=Plus/Plus
Query 583 AGGAGAGATTCCTTCTTCACTAGGAAACCTTTCTCGTCTCGTAAACCTTGAGCTTTTTTC 642
||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||| |||
Sbjct 345 AGGAGAGATTCCTTCTTCACTAGGAAACCTTTCTCGTCTGGTAAATCTTGAACTTTCTTC 404
Query 643 TAATAGATTGGTTGGTAAGATTCCAGATTCAATAGG-AGATCTAAAGCAGCTAAGAAACC 701
|||||||||||| ||| |||||| ||||||||||| | | |||||| | ||||||||||
Sbjct 405 TAATAGATTGGTCGGTGCGATTCCGGATTCAATAGGCA-ACCTAAAGAATCTAAGAAACC 463
Query 702 TTAGCCTTGC-GTCTAACAATCTCATAGGCGAGATTCCTTCTTCCTTAGGAAACCTTTCT 760
||||||||| | |||| |||||||||| || |||||||||||| ||||||||||||||
Sbjct 464 TTAGCCTTGGAGA-TAACGATCTCATAGGAGAAATTCCTTCTTCCATAGGAAACCTTTCT 522
Query 761 AATCTCGTACATCTTGTTCTTACGCA-TAATCAATTGGTAGGTGAAGTTCC-TGCCTCCA 818
|||| || |||||| ||| | | |||||| ||||||||||||||||| | | ||||
Sbjct 523 CTTCTCTTAGATCTTGACCTTTGG-AGTAATCATTTGGTAGGTGAAGTTCCAT-CTTCCA 580
Query 819 TAGGAAATCTAATCGAACTAAGAGTTATGTCATTTGA 855
| ||||| |||| |||||||||||| |||||| ||||
Sbjct 581 TCGGAAACCTAAACGAACTAAGAGTCATGTCACTTGA 617
> Ahg477824 jgi|Araly1|477824|fgenesh2_kg.3__525__AT3G05360.1
Length=2525
Score = 67.6 bits (36), Expect = 5e-10
Identities = 38/39 (97%), Gaps = 0/39 (0%)
Strand=Plus/Plus
Query 584 GGAGAGATTCCTTCTTCACTAGGAAACCTTTCTCGTCTC 622
||||||||| |||||||||||||||||||||||||||||
Sbjct 373 GGAGAGATTACTTCTTCACTAGGAAACCTTTCTCGTCTC 411
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 104253000565
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5