BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G71890.1 Length=1804 Score E Sequences producing significant alignments: (Bits) Value Ahg497263 jgi|Araly1|497263|fgenesh2_kg.106__1__AT1G71890.1 2459 0.0 Ahg476315 jgi|Araly1|476315|fgenesh2_kg.2__1445__AT1G71890.1 2453 0.0 Ahg926547 jgi|Araly1|926547|scaffold_202108.1 1533 0.0 Ahg472513 jgi|Araly1|472513|fgenesh2_kg.1__2467__AT1G22710.1 713 0.0 > Ahg497263 jgi|Araly1|497263|fgenesh2_kg.106__1__AT1G71890.1 Length=1634 Score = 2459 bits (1331), Expect = 0.0 Identities = 1505/1589 (95%), Gaps = 11/1589 (1%) Strand=Plus/Plus Query 21 TTTTCTTTTTGTCTGCTCGTTTTTCTTTTCATAATGGGAGCCTTGGAAGCAGAAAGAGCC 80 ||||||||||||||| ||| | || ||||||||||||||||||||||||||||||||||| Sbjct 1 TTTTCTTTTTGTCTGTTCG-TGTT-TTTTCATAATGGGAGCCTTGGAAGCAGAAAGAGCC 58 Query 81 GCCAACAATGCTACGGCGTTAGAGACACAGTCGTCACCGGAAGATCTCGGTCAACCATCT 140 |||||| |||| ||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct 59 GCCAACGATGCGGCGGCGTTAGAGACACAGTCTTCATCGGAAGATCTCGGTCAACCATCT 118 Query 141 CCTCTGCGTAAGATCATCTCCGTCGCTTCAATCGCCGCCGGTGTACAGTTCGGGTGGGCC 200 || |||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||| Sbjct 119 CCGCTGCGTAAAATCATCTCCGTGGCTTCAATCGCCGCCGGTGTACAGTTTGGGTGGGCC 178 Query 201 TTACAGCTTTCTCTTCTGACTCCTTACATACAACTCCTCGGGATCCCTCACAAATGGTCG 260 |||||||| |||||||||||||||||| ||||||| ||||| |||||||||||||||||| Sbjct 179 TTACAGCTCTCTCTTCTGACTCCTTACGTACAACTTCTCGGAATCCCTCACAAATGGTCG 238 Query 261 TCTTACATGTGGCTTTGTGGTCCTATCTCCGGCATGATTGTTCAACCGATCGTCGGTTAC 320 |||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||| Sbjct 239 TCTTACATGTGGCTCTGTGGTCCTATCTCCGGCATGCTTGTTCAACCAATCGTCGGTTAC 298 Query 321 CACAGTGACCGATGCGAGTCCAGATTCGGTCGCCGTCGTCCTTTCATTGCCGCCGGAGTC 380 ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| | Sbjct 299 CACAGTGACCGATGCGAGTCCAGATTCGGTCGCCGTCGTCCTTTCATCGCCACCGGAGCC 358 Query 381 GCACTCGTAGCCGTCTCGGTTTTCCTTATCGGATTCGCGGCGGATATGGGACATAGTTTT 440 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 359 GTACTCGTAGCCGTCTCGGTTTTCCTTATCGGATTCGCGGCGGATATGGGACATAGTTTT 418 Query 441 GGAGATAAACTCGAGAACAAGGTAAGGACTCGAGCCATTATAATCTTCCTAACCGGGTTT 500 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 419 GGAGATAAACTCGAGAACAAGGTAAGGACTCGAGCCATTATAATCTTCCTTACCGGGTTT 478 Query 501 TGGTTCCTCGACGTGGCTAACAACACCTTACAAGGACCATGCCGTGCTTTCTTAGCCGAT 560 ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 479 TGGGTCCTTGACGTGGCTAACAACACCTTACAAGGACCATGCCGTGCTTTCTTAGCCGAT 538 Query 561 TTAGCCGCCGGAGACGCTaaaaaaaCGCGAGTCGCAAACGCGTGTTTCTCCTTCTTTATG 620 ||||||||||||||||||||||||||||||||||||||||| |||||||| || |||||| Sbjct 539 TTAGCCGCCGGAGACGCTAAAAAAACGCGAGTCGCAAACGCATGTTTCTCTTTTTTTATG 598 Query 621 GCGGTTGGAAACGTTTTGGGTTACGCTGCTGGATCTTACACTAACCTTCACAAAATGTTT 680 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 599 GCGGTTGGAAACGTTTTGGGTTACGCTGCTGGATCTTACACTAACCTTCACAAAATGTTT 658 Query 681 CCTTTCACAATGACAAAAGCTTGCGACATCTATTGTGCGAATCTCAAGACTTGTTTCTTC 740 |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct 659 CCTTTCACAATGACAAAAGCTTGCGATGTCTATTGCGCGAATCTCAAGACTTGTTTCTTC 718 Query 741 TTATCCATCACTCTCCTCCTTATCGTCACATTCTCGTCTCTATGGTACGTTAAAGACAAA 800 ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct 719 CTATCCATCACTCTCCTCCTTATCCTCACCTTCTCGTCTCTATGGTACGTTAAAGACAAA 778 Query 801 CAATGGTCTCCACCTCAAGGAGACAAGGAGGAGAAAACATCAAGTCtttttttCTTTGGA 860 ||||||||||| || || ||||| || | |||||||||||||||||||||||||||||| Sbjct 779 CAATGGTCTCCGCCACATGGAGAGAA--A-GAGAAAACATCAAGTCTTTTTTTCTTTGGA 835 Query 861 GAAATCTTTGGAGCTGTTAGACACATGAAACGTCCCATGGT-GATGCTTCTAATTGTCAC 919 ||||||||||||||||| ||| ||||||||||||||| || |||||||||||| ||||| Sbjct 836 GAAATCTTTGGAGCTGTCAGAGTCATGAAACGTCCCAT-GTGGATGCTTCTAATGGTCAC 894 Query 920 GGTCATTAATTGGATCGCTTGGTTTCCATTTATTTTGTATGATACCGATTGGATGGGTCG 979 ||| ||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||| Sbjct 895 GGTTATTAATTGGATCGCTTGGTTTCCGTTTCTTTTGTACGATACCGATTGGATGGGTCG 954 Query 980 TGAAGTGTACGGTGGAAACTCAGATGGAGATGAACGATCGAAGAAACTTTACGACCAAGG 1039 |||||||||||||||||| ||||||||| |||| | | | |||||||||||||||||||| Sbjct 955 TGAAGTGTACGGTGGAAATTCAGATGGAAATGAGCAAGCCAAGAAACTTTACGACCAAGG 1014 Query 1040 AGTTCAGGCTGGTGCATTGGGATTGATGTTTAATTCTATACTTCTTGGTTTCGTGTCACT 1099 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1015 AGTTCAGGCTGGTGCATTGGGATTGATGTTTAATTCAATACTTCTTGGTTTCGTGTCACT 1074 Query 1100 TGGTGTTGAATCGATTGGTCGGAAAATGGGAGGAGCTAAACGACTTTGGGGATGTGTGAA 1159 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1075 TGGTGTTGAATCGATTGGTCGGAAAATGGGAGGAGCTAAACGACTTTGGGGATGTGTGAA 1134 Query 1160 TTTCATACTCGCCATAGGTTTGGCCATGACGGTTCTTGTTACTAAATCGGCTGAGCATCA 1219 |||||||||||||||||||||||||||||||||||||||||| |||| ||||| | || Sbjct 1135 TTTCATACTCGCCATAGGTTTGGCCATGACGGTTCTTGTTACGCAATCCGCTGATAACCA 1194 Query 1220 CCGGGAAATCGCCGGTCCTTTAG-CCGGACCGAGCAGTGGTATTAAAGCCGGAGTATTTA 1278 |||| ||| ||||||| |||| | |||||||||||||||||||||||||||||||||||| Sbjct 1195 CCGGAAAACCGCCGGTGCTTT-GTCCGGACCGAGCAGTGGTATTAAAGCCGGAGTATTTA 1253 Query 1279 GTCTCTTTACCGTTCTTGGTATCCCATTGGCCATTACTTACAGTATTCCATTTGCACTAG 1338 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1254 GTCTCTTTACCGTTCTTGGTATCCCATTGGCCATTACTTACAGTGTTCCATTTGCACTAG 1313 Query 1339 CGTCCATTTTCTCAACCAATTCCGGTGCCGGCCAAGGACTTTCAT-TAGGCGTTTTAAAT 1397 ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct 1314 CGTCCATTTTCTCAACCAATTCCGGTGCCGGCCAAGGACTTTC-TCTAGGCGTTTTAAAT 1372 Query 1398 ATAGCGATTTGTATACCACAAATGATAGTATCATTCTCAAGTGGACCATTGGACGCTCAA 1457 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1373 ATAGCGATTTGTATACCACAAATGATAGTATCATTCTCAAGTGGACCATTGGACGCTCAC 1432 Query 1458 TTCGGCGGTGGAAACCTACCTTCATTTGTGGTCGGAGCAATTGCCGCGGCGGTTAGTGGA 1517 |||||||||||||||||||||||||||||||||||||| ||||| || ||| |||||||| Sbjct 1433 TTCGGCGGTGGAAACCTACCTTCATTTGTGGTCGGAGCTATTGCGGCTGCGATTAGTGGA 1492 Query 1518 GTCTTAGCGTTAACCGTTTTACCTTCACCGCCTCCGGACGCACCAGCCATGTCAGGGGCT 1577 || ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct 1493 GTGTTAGCGTTAACCGTTCTACCTTCACCGCCTGCGGACGCACCAGCCATGTCAGGGGCT 1552 Query 1578 ATGGGATTCCATTAGTTAACTAGTTTTTA 1606 ||||||||||||||||| |||||| |||| Sbjct 1553 ATGGGATTCCATTAGTTTACTAGTCTTTA 1581 > Ahg476315 jgi|Araly1|476315|fgenesh2_kg.2__1445__AT1G71890.1 Length=1634 Score = 2453 bits (1328), Expect = 0.0 Identities = 1504/1589 (95%), Gaps = 11/1589 (1%) Strand=Plus/Plus Query 21 TTTTCTTTTTGTCTGCTCGTTTTTCTTTTCATAATGGGAGCCTTGGAAGCAGAAAGAGCC 80 ||||||||||||||| ||| | || ||||||||||||||||||||||||||||||||||| Sbjct 1 TTTTCTTTTTGTCTGTTCG-TGTT-TTTTCATAATGGGAGCCTTGGAAGCAGAAAGAGCC 58 Query 81 GCCAACAATGCTACGGCGTTAGAGACACAGTCGTCACCGGAAGATCTCGGTCAACCATCT 140 |||||| |||| ||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct 59 GCCAACGATGCGGCGGCGTTAGAGACACAGTCTTCATCGGAAGATCTCGGTCAACCATCT 118 Query 141 CCTCTGCGTAAGATCATCTCCGTCGCTTCAATCGCCGCCGGTGTACAGTTCGGGTGGGCC 200 || |||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||| Sbjct 119 CCGCTGCGTAAAATCATCTCCGTGGCTTCAATCGCCGCCGGTGTACAGTTTGGGTGGGCC 178 Query 201 TTACAGCTTTCTCTTCTGACTCCTTACATACAACTCCTCGGGATCCCTCACAAATGGTCG 260 |||||||| |||||||||||||||||| ||||||| ||||| |||||||||||||||||| Sbjct 179 TTACAGCTCTCTCTTCTGACTCCTTACGTACAACTTCTCGGAATCCCTCACAAATGGTCG 238 Query 261 TCTTACATGTGGCTTTGTGGTCCTATCTCCGGCATGATTGTTCAACCGATCGTCGGTTAC 320 |||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||| Sbjct 239 TCTTACATGTGGCTCTGTGGTCCTATCTCCGGCATGCTTGTTCAACCAATCGTCGGTTAC 298 Query 321 CACAGTGACCGATGCGAGTCCAGATTCGGTCGCCGTCGTCCTTTCATTGCCGCCGGAGTC 380 ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| | Sbjct 299 CACAGTGACCGATGCGAGTCCAGATTCGGTCGCCGTCGTCCTTTCATCGCCACCGGAGCC 358 Query 381 GCACTCGTAGCCGTCTCGGTTTTCCTTATCGGATTCGCGGCGGATATGGGACATAGTTTT 440 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 359 GTACTCGTAGCCGTCTCGGTTTTCCTTATCGGATTCGCGGCGGATATGGGACATAGTTTT 418 Query 441 GGAGATAAACTCGAGAACAAGGTAAGGACTCGAGCCATTATAATCTTCCTAACCGGGTTT 500 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 419 GGAGATAAACTCGAGAACAAGGTAAGGACTCGAGCCATTATAATCTTCCTTACCGGGTTT 478 Query 501 TGGTTCCTCGACGTGGCTAACAACACCTTACAAGGACCATGCCGTGCTTTCTTAGCCGAT 560 ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 479 TGGGTCCTTGACGTGGCTAACAACACCTTACAAGGACCATGCCGTGCTTTCTTAGCCGAT 538 Query 561 TTAGCCGCCGGAGACGCTaaaaaaaCGCGAGTCGCAAACGCGTGTTTCTCCTTCTTTATG 620 ||||||||||||||||||||||||||||||||||||||||| |||||||| || |||||| Sbjct 539 TTAGCCGCCGGAGACGCTAAAAAAACGCGAGTCGCAAACGCATGTTTCTCTTTTTTTATG 598 Query 621 GCGGTTGGAAACGTTTTGGGTTACGCTGCTGGATCTTACACTAACCTTCACAAAATGTTT 680 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 599 GCGGTTGGAAACGTTTTGGGTTACGCTGCTGGATCTTACACTAACCTTCACAAAATGTTT 658 Query 681 CCTTTCACAATGACAAAAGCTTGCGACATCTATTGTGCGAATCTCAAGACTTGTTTCTTC 740 |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct 659 CCTTTCACAATGACAAAAGCTTGCGATGTCTATTGCGCGAATCTCAAGACTTGTTTCTTC 718 Query 741 TTATCCATCACTCTCCTCCTTATCGTCACATTCTCGTCTCTATGGTACGTTAAAGACAAA 800 ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct 719 CTATCCATCACTCTCCTCCTTATCCTCACCTTCTCGTCTCTATGGTACGTTAAAGACAAA 778 Query 801 CAATGGTCTCCACCTCAAGGAGACAAGGAGGAGAAAACATCAAGTCtttttttCTTTGGA 860 ||||||||||| || || ||||| || | ||||||||||||||| |||||||||||||| Sbjct 779 CAATGGTCTCCGCCACATGGAGAGAA--A-GAGAAAACATCAAGTGTTTTTTTCTTTGGA 835 Query 861 GAAATCTTTGGAGCTGTTAGACACATGAAACGTCCCATGGT-GATGCTTCTAATTGTCAC 919 ||||||||||||||||| ||| ||||||||||||||| || |||||||||||| ||||| Sbjct 836 GAAATCTTTGGAGCTGTCAGAGTCATGAAACGTCCCAT-GTGGATGCTTCTAATGGTCAC 894 Query 920 GGTCATTAATTGGATCGCTTGGTTTCCATTTATTTTGTATGATACCGATTGGATGGGTCG 979 ||| ||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||| Sbjct 895 GGTTATTAATTGGATCGCTTGGTTTCCGTTTCTTTTGTACGATACCGATTGGATGGGTCG 954 Query 980 TGAAGTGTACGGTGGAAACTCAGATGGAGATGAACGATCGAAGAAACTTTACGACCAAGG 1039 |||||||||||||||||| ||||||||| |||| | | | |||||||||||||||||||| Sbjct 955 TGAAGTGTACGGTGGAAATTCAGATGGAAATGAGCAAGCCAAGAAACTTTACGACCAAGG 1014 Query 1040 AGTTCAGGCTGGTGCATTGGGATTGATGTTTAATTCTATACTTCTTGGTTTCGTGTCACT 1099 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1015 AGTTCAGGCTGGTGCATTGGGATTGATGTTTAATTCAATACTTCTTGGTTTCGTGTCACT 1074 Query 1100 TGGTGTTGAATCGATTGGTCGGAAAATGGGAGGAGCTAAACGACTTTGGGGATGTGTGAA 1159 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1075 TGGTGTTGAATCGATTGGTCGGAAAATGGGAGGAGCTAAACGACTTTGGGGATGTGTGAA 1134 Query 1160 TTTCATACTCGCCATAGGTTTGGCCATGACGGTTCTTGTTACTAAATCGGCTGAGCATCA 1219 |||||||||||||||||||||||||||||||||||||||||| |||| ||||| | || Sbjct 1135 TTTCATACTCGCCATAGGTTTGGCCATGACGGTTCTTGTTACGCAATCCGCTGATAACCA 1194 Query 1220 CCGGGAAATCGCCGGTCCTTTAG-CCGGACCGAGCAGTGGTATTAAAGCCGGAGTATTTA 1278 |||| ||| ||||||| |||| | |||||||||||||||||||||||||||||||||||| Sbjct 1195 CCGGAAAACCGCCGGTGCTTT-GTCCGGACCGAGCAGTGGTATTAAAGCCGGAGTATTTA 1253 Query 1279 GTCTCTTTACCGTTCTTGGTATCCCATTGGCCATTACTTACAGTATTCCATTTGCACTAG 1338 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1254 GTCTCTTTACCGTTCTTGGTATCCCATTGGCCATTACTTACAGTGTTCCATTTGCACTAG 1313 Query 1339 CGTCCATTTTCTCAACCAATTCCGGTGCCGGCCAAGGACTTTCAT-TAGGCGTTTTAAAT 1397 ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct 1314 CGTCCATTTTCTCAACCAATTCCGGTGCCGGCCAAGGACTTTC-TCTAGGCGTTTTAAAT 1372 Query 1398 ATAGCGATTTGTATACCACAAATGATAGTATCATTCTCAAGTGGACCATTGGACGCTCAA 1457 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1373 ATAGCGATTTGTATACCACAAATGATAGTATCATTCTCAAGTGGACCATTGGACGCTCAC 1432 Query 1458 TTCGGCGGTGGAAACCTACCTTCATTTGTGGTCGGAGCAATTGCCGCGGCGGTTAGTGGA 1517 |||||||||||||||||||||||||||||||||||||| ||||| || ||| |||||||| Sbjct 1433 TTCGGCGGTGGAAACCTACCTTCATTTGTGGTCGGAGCTATTGCGGCTGCGATTAGTGGA 1492 Query 1518 GTCTTAGCGTTAACCGTTTTACCTTCACCGCCTCCGGACGCACCAGCCATGTCAGGGGCT 1577 || ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct 1493 GTGTTAGCGTTAACCGTTCTACCTTCACCGCCTGCGGACGCACCAGCCATGTCAGGGGCT 1552 Query 1578 ATGGGATTCCATTAGTTAACTAGTTTTTA 1606 ||||||||||||||||| |||||| |||| Sbjct 1553 ATGGGATTCCATTAGTTTACTAGTCTTTA 1581 > Ahg926547 jgi|Araly1|926547|scaffold_202108.1 Length=1586 Score = 1533 bits (830), Expect = 0.0 Identities = 1354/1600 (85%), Gaps = 63/1600 (4%) Strand=Plus/Plus Query 40 TTTTTCTT-TTCATAATGGGAGCCTTGGAAGCAGAAAGAGCC-GCCAACA-ATGCTACGG 96 |||||||| | |||||||||||||| ||| |||||| | || | || | |||| ||| Sbjct 10 TTTTTCTTCCTGATAATGGGAGCCTTTGAAACAGAAA-AACCAACTAA-AGATGCGGCGG 67 Query 97 CGT-TAGAGACACAGTCGTCACCGGAAGATCTCGGTCAACCATCTCCTCTGCGTAAGATC 155 | | |||||||||||||| ||||||||| ||| ||||||||| || || ||||| ||| Sbjct 68 C-TCTAGAGACACAGTCG---CCGGAAGATTTCGATCAACCATCGCCGCTTCGTAAAATC 123 Query 156 ATCTCCGTCGCTTCAATCGCCGCCGGTGTACAGTTCGGGTGGGCCTTACAGCTTTCTCTT 215 |||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 124 ATCTCCGTCGCTTCCATCGCCGCTGGTGTACAGTTCGGGTGGGCCTTACAGCTCTCTCTT 183 Query 216 CTGACTCCTTACATACAACTCCTCGGGATCCCTCACAAATGGTCGTCT-TACATGTGGCT 274 |||||||| ||| | |||||||| || ||||| ||||||||||| ||| | ||| ||||| Sbjct 184 CTGACTCCGTACGTTCAACTCCTTGGAATCCCACACAAATGGTCATCTCT-CATTTGGCT 242 Query 275 TTGTGGTCCTA-TCTCCGGCATGATTGTTCAACCGATCGTCGGTTACCACAGTGACCGAT 333 |||||||| | ||||||||||||||||||| || |||||||||| |||||||||||||| Sbjct 243 CTGTGGTCC-AGTCTCCGGCATGATTGTTCAGCCAATCGTCGGTTTCCACAGTGACCGAT 301 Query 334 GCGA-GTCCAGATTCGGTCGCCGTCGTCCTTTCATTGCCGCCGGAGTCGCACTCGTAGCC 392 || | |||||||||||||||||||||||||||||| || |||||| ||||||||| || Sbjct 302 GC-AGGTCCAGATTCGGTCGCCGTCGTCCTTTCATCGCATCCGGAGCCGCACTCGTCGCT 360 Query 393 GTCTCGGTTTTCCTTATCGGATT-CGCGGCGGATATGGGACATAGTTTTGGAGATAAACT 451 ||| | |||||||| ||||| || ||| |||||| | || ||| | ||||||||||| Sbjct 361 GTCGCCGTTTTCCTCATCGG-TTACGCTGCGGATTTCGGTTATAAAATGGGAGATAAACT 419 Query 452 CGAGAACAAGGT-AAGGACTCGAGCCATTA-TAATCTTC-CTAAC-CGGGTTTTGGTTCC 507 ||| ||||||| || | |||||| | || |||||| || | |||||| ||| ||| Sbjct 420 TGAGGACAAGGTAAAAG-TTCGAGCTA-TAGGGATCTTCGCT--CTCGGGTTCTGGATCC 475 Query 508 TCGACGTGGCTAACAACACCTTACAAGGACCATGCCGTGCTTTCTTAGCCGATTTAGCCG 567 ||||||| || |||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct 476 TCGACGTTGCCAACAACACCTTACAAGGACCTTGCCGTGCTTTCTTAGCGGATTTAGCCG 535 Query 568 CCGGAGACGCTaaaaaaaCGCGAGTCGCAAACGCGTGTTTCTCCTTCTTTATGGCGGTTG 627 |||| |||||||| | ||||||||||||||| |||| |||||| || ||||||||||||| Sbjct 536 CCGGTGACGCTAAGAGAACGCGAGTCGCAAATGCGTTTTTCTCTTTTTTTATGGCGGTTG 595 Query 628 GAAACGTTTTGGGTTACGCTGCTGGATCTTACACTAACCTTCACAAAATGTTTCCTTTCA 687 ||||||||||||| ||||| |||||||| |||||| |||||||||| |||||||| |||| Sbjct 596 GAAACGTTTTGGGATACGCGGCTGGATCGTACACTCACCTTCACAAGATGTTTCCGTTCA 655 Query 688 CAATGACAAAAGCTTGCGACATCTATTGTGCGAATCTCAAGACTTGTTTCTTCTTATCCA 747 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct 656 CAATGACAAAAGCTTGCGATATCTATTGCGCGAATCTCAAGACTTGTTTCTTCTTATCCA 715 Query 748 TCACTCTCCTCCTTATCGTCACATTCTCGTCTCTATGGTACGTTAAAGACAAACAATGGT 807 ||||||||||||| |||||||| || ||||||| ||||||||||||||||||||||||| Sbjct 716 TCACTCTCCTCCTCATCGTCACCGTCACGTCTCTTTGGTACGTTAAAGACAAACAATGGT 775 Query 808 CTCCACCTCAA-GGA-----GACAAGGAGGAGAAAACATCAAGTCtttt-tttCTTTGGA 860 |||| || | ||| ||| | || ||||| || ||||| | || ||| || || Sbjct 776 CTCCGCCGCCGCGGAACTCCGACGACGACGAGAAGACCTCAAG-CGTTCCTTTGTTCGGT 834 Query 861 GAAATCTTTGGAGCTGTT-AGACACATGAAACGTCCCATGGTG-ATGCTTCTAATTGTCA 918 ||||||||||||||| || ||| |||||||||||||||| || ||||||||||| |||| Sbjct 835 GAAATCTTTGGAGCT-TTCAGAGTCATGAAACGTCCCATG-TGGATGCTTCTAATCGTCA 892 Query 919 CGGTCATTAAT-TGGATCGCTTGGTTTCCATTTATTTTGTAT-GATACCGATTGGATGGG 976 ||| | |||| |||||||||||||| |||||| |||||| | ||||| ||||||||||| Sbjct 893 CGGCC-TTAAACTGGATCGCTTGGTTCCCATTTCTTTTGT-TCGATACTGATTGGATGGG 950 Query 977 TCGTGAAGTGTACGGTGGAAACTCAGATGGAGATGAACGATCGAAGAAACTTTAC-GACC 1035 ||||||||||||||||||| | ||||||||| ||||||||||||||||||| ||| | || Sbjct 951 TCGTGAAGTGTACGGTGGAGATTCAGATGGAAATGAACGATCGAAGAAACTATACAG-CC 1009 Query 1036 AAGGAGTTCAGGCTGGTGC-ATTGGGATTGATGTTTAATTCTATACTTCTTGGTTTCGTG 1094 ||||| || ||||||| || |||||||||||||||||||||| ||||||||||| || Sbjct 1010 TTGGAGTCCAATCTGGTGCCAT-GGGATTGATGTTTAATTCTATAGTTCTTGGTTTCATG 1068 Query 1095 TCACTTGGTGTTGAATCGATTGGTCGGAAAATGGGAGGAGCTAAACGACTTTGGGGA-TG 1153 |||||||||||||||| ||||||||||||| | |||||||||||||| ||||||||| | Sbjct 1069 TCACTTGGTGTTGAATGGATTGGTCGGAAACTAGGAGGAGCTAAACGGCTTTGGGGAAT- 1127 Query 1154 TGTGAATTTCATACTCGCCA-TAGGTTTGGCCATGACGGTTCTTGTTACTAAATCGGCTG 1212 |||||||||||| |||||| | |||||||||||||||||||| ||| | |||| || | Sbjct 1128 TGTGAATTTCATCCTCGCCGCT-GGTTTGGCCATGACGGTTCTCGTTTCGAAATTAGCCG 1186 Query 1213 AGCATCACCGGGAAATCGCCGGTCCTTTAGCCGGACCGAGCAGTGGTATTAAAGCCGGAG 1272 || |||||||| ||| ||||||| ||||||||||||||||||||||||||||||| |||| Sbjct 1187 AGGATCACCGGAAAACCGCCGGTGCTTTAGCCGGACCGAGCAGTGGTATTAAAGCAGGAG 1246 Query 1273 TATTTA-GTCTCTTTACCGTTCTTGGTATCCCATTGGCCATTACTTACAGTATTCCATTT 1331 |||| |||||||| | ||||||||||||||||| || ||||||| |||| ||| ||| Sbjct 1247 C-TTTAAGTCTCTTTGCTGTTCTTGGTATCCCATTAGCTATTACTTTTAGTACTCCGTTT 1305 Query 1332 GCACTAGCGTCCATTTTCTCAACCAATTCCGGTGCCGGCCAAGGACTTTCATTAGGCGTT 1391 || ||||||||||| ||||||| | |||||||| |||||||| ||||| ||||| ||| Sbjct 1306 GCTCTAGCGTCCATATTCTCAAGCTGCTCCGGTGCAGGCCAAGGGCTTTCTTTAGGAGTT 1365 Query 1392 TTAAATATAGCGATT-TGTATACCACAAATGATAGTATCATTCTCAAG-TGGACCATTGG 1449 |||||| | |||||| || ||||||||||||||||||||| | | || |||||| || | Sbjct 1366 TTAAATTTGGCGATTGTG-ATACCACAAATGATAGTATCACT-TGGAGGTGGACCTTTTG 1423 Query 1450 ACGCTCAATTCGGCGGTGGAAACCTACCTTCATTTGTGGTCGGAGCAATTGCCGCGGCGG 1509 |||| | ||||||||||||||| |||| | ||| | || | ||||||||| |||||| Sbjct 1424 ACGCCCTGTTCGGCGGTGGAAACTTACCGGCGTTTATCGTTGCAGCAATTGCAGCGGCGA 1483 Query 1510 TTAGTGGAGTCTTAGCGTTAACCGTTTTACCTTCACCGCCTCCGGACGCACCAGCCATGT 1569 |||||||||| ||||| ||||||||||| ||||||||||| ||||| || || | | | Sbjct 1484 TTAGTGGAGTATTAGCCTTAACCGTTTTGCCTTCACCGCCACCGGATGC-CC--CTAAGG 1540 Query 1570 CAGGGGCTATGGGA---TTCCATTAGTTAACTA-GTTTTT 1605 || ||| |||||| ||||| ||||| |||| |||||| Sbjct 1541 CAACGGCCATGGGAGGATTCCACTAGTTTACTATGTTTTT 1580 > Ahg472513 jgi|Araly1|472513|fgenesh2_kg.1__2467__AT1G22710.1 Length=1956 Score = 713 bits (386), Expect = 0.0 Identities = 1124/1465 (77%), Gaps = 112/1465 (8%) Strand=Plus/Plus Query 150 AAGATCATCTCCGTCGCTTCAATCGCCGCCGGTGTACAGTTCGGGTGGGCCTTACAGCTT 209 |||||||| || || ||||| || |||||||||||||||||||| ||||| |||||| || Sbjct 236 AAGATCATATCGGTGGCTTCGATTGCCGCCGGTGTACAGTTCGGTTGGGCTTTACAG-TT 294 Query 210 -TCTCT-TCTGACTCCTTACATACAACTCCTCGGGATCCCTCACAAATGGTCGTCT-TAC 266 ||||| | |||| |||||| | || || ||||| ||||| || |||||| | ||| | Sbjct 295 ATCTCTGT-TGACACCTTACGTGCAGCTACTCGGAATCCCACATAAATGGGCTTCTCT-G 352 Query 267 ATGTGGCTTTGTGGTCCTATCTCCGGCATGATTGTTCAACCGATCGTCGGTTACCACAGT 326 || ||||| |||||||| |||||||| ||| |||| || || ||||| |||||||||||| Sbjct 353 ATTTGGCTCTGTGGTCCAATCTCCGGTATGCTTGTCCAGCCTATCGTTGGTTACCACAGT 412 Query 327 GACCGATGCGA-GTCCAGATTCGGTCGCCGTCGTCCTTTCATTGCCGCCGGAGTC-GCAC 384 ||||| ||| | || |||||||| || |||||||||||||| | |||||||| | | Sbjct 413 GACCGTTGC-ACCTCTAGATTCGGCCGTCGTCGTCCTTTCATCGTCGCCGGAG-CTGGTT 470 Query 385 TCGT-AGCCGTCT-CGGTTTTCCTTATCGGATT-CGCGGCGGATATGGGACATAGTTTTG 441 | || | | || | | |||||||||||||| || ||| || ||||| || || || | | Sbjct 471 TAGTCA-CGGT-TGCTGTTTTCCTTATCGG-TTACGCTGCCGATATAGGTCACAGCATGG 527 Query 442 GAGATAAACTCGA-GAACAAG-GTAAGGACTCGAGCCATTA-TAATCTTC-CTAAC-CGG 496 | ||||| || | ||| | | || || ||||| | || || ||| || | ||| Sbjct 528 GTGATAAGCTTAACAAAC-CGCCT-AGAACGCGAGCTA-TAGCGATATTCGCT--CTCGG 582 Query 497 GTTTTGG-TTCCTCGACGTGGCTAACAACACCTTACAAGGACCATGCCGTGCTTTCTTAG 555 ||||||| || || ||||||||||||||||||||||||||||| ||| | |||||||| | Sbjct 583 GTTTTGGATT-CTTGACGTGGCTAACAACACCTTACAAGGACCCTGCAGAGCTTTCTTGG 641 Query 556 CCGATTTAGCCGC-CGGAGACGCTaaa-aaaaCGC-GAGTCGCAAACGCGTGTTTCTCCT 612 | |||||| | || ||| |||| ||| ||||||| || ||||||||||| |||||| | Sbjct 642 CTGATTTATCAGCAGGGA-ACGC-AAAGAAAACGCGGA-CCGCAAACGCGTTTTTCTCGT 698 Query 613 TCTTTATGGCGGTTGGAAACGTTTTGGGTTACGCTGCTGGATCTTACACTAACCT-TCAC 671 |||||||||||||||||||||||||||||||||| || |||||||||| || || | || Sbjct 699 TCTTTATGGCGGTTGGAAACGTTTTGGGTTACGCGGCGGGATCTTACAGAAATCTCT-AC 757 Query 672 AAAAT-GTTTCCTTTCACAATGACAAAAG-CTTGCGA-CATCTATTGTGCGAATCTCAAG 728 ||| | || |||||||| ||||| | | | ||||| | |||| || || || ||||| Sbjct 758 AAAGTTGTG-CCTTTCACGATGACTGA-GTCATGCGATC-TCTACTGCGCAAACCTCAAA 814 Query 729 ACTTGTTTCTTCTTATCCATCACTCTCCTCCT-TATCGTCACATTC-TCGTCTCTATGGT 786 || ||||| ||| ||||||| || || ||||| | | ||||| ||| | ||||| || | Sbjct 815 ACGTGTTTTTTCCTATCCATAACGCTTCTCCTCT-TAGTCACTTTCATA-TCTCTCTGTT 872 Query 787 ACGTTAAAGACAAACAATGGTCTCCACCTC-AAGGAGACAAGGA-GGAGAAAACATCAA- 843 |||| || || || | |||| | ||| | || || || | | ||| ||||| |||| Sbjct 873 ACGTGAAGGAGAAGCCATGGACGCCAGAGCCAAC-AG-CA-G-ATGGA-AAAACCTCAAA 927 Query 844 -GT-CtttttttCTTTGGAGAAATCTTTGGAGCTGTT-A-G-ACACATGAAACGTCCCAT 898 || | |||||| |||||||||||||||||| || | | | || | ||| | || || Sbjct 928 CGTTCCGTTTTTC---GGAGAAATCTTTGGAGCT-TTCAAGGA-AC-TAAAAAGACCGAT 981 Query 899 GGTG-ATGCTTCTAATTGTCACGGTCATTAAT-TGGATCGCTTGGTTTCCATTTATTT-T 955 | || |||||||| || ||||| | || ||| |||||||||||||| || ||| || | Sbjct 982 G-TGGATGCTTCTTATAGTCACTG-CACTAAACTGGATCGCTTGGTTCCC-TTTCCTTCT 1038 Query 956 GTAT-GATACCGATTGGATGGGTCGTGAAGTGTACGGTGGAAACTCAGATGGAGATG-AA 1013 | | || || ||||||||||| ||||| |||||||| ||| ||||||| | | | | || Sbjct 1039 CT-TCGACACTGATTGGATGGGCCGTGAGGTGTACGGAGGAGACTCAGACGCAAAAGCAA 1097 Query 1014 C-G-ATC-G--AAGAAACTTTACGACCAAGGAGTTCAG-GCTGGTGCATTGGGA-TTGAT 1066 | | | | | ||||| |||||| || | || || ||| |||||||| ||||| || || Sbjct 1098 CCGCAGCCGCTAAGAAGCTTTACAACGACGGGGT-CAGAGCTGGTGCGTTGGGGCTT-AT 1155 Query 1067 GTTTAATTCTATACTTCTTGGTTTCGTGTCACTTGGTGTTGAATCGATTGGTCGGAAAAT 1126 | |||| |||| ||||||||||| |||| |||||||| |||| ||||||||||||| | Sbjct 1156 GCTTAACGCTATTGTTCTTGGTTTCATGTCTCTTGGTGTGGAATGGATTGGTCGGAAATT 1215 Query 1127 GGGAGGAGCTAAACGACTTTGGGG-ATGTGTGAATTTCATACTCGCCATAGGTTTGGCCA 1185 ||||||||||||| | |||||||| || ||| || ||||| |||||||| | ||||||| Sbjct 1216 GGGAGGAGCTAAAAGGCTTTGGGGTAT-TGTTAACTTCATCCTCGCCATTTGCTTGGCCA 1274 Query 1186 TGACGGTTCTTGTTACTAAATC-GGCTGAGCATCACCGG-GAAATCGC--CGGTC-CTTT 1240 |||||||| | ||||| ||| | ||| ||| ||||||| || ||| | ||| | || Sbjct 1275 TGACGGTTGTGGTTACGAAA-CAGGCGGAGAATCACCGACGAGATCACGGCGG-CGCTAA 1332 Query 1241 AGCCGGACCGAGCAGTGGTAT--TAA-AGCCGGAGTATTTAG-TCTCTTTACCGTTCTTG 1296 | | ||||| | | ||||| | | ||| || | |||| |||||| ||||||| | Sbjct 1333 AACAGGACC-ACC--TGGTAACGTCACAGCTGGTGC-TTTAACTCTCTTCGCCGTTCTCG 1388 Query 1297 GTAT-CC-CATTGGCCATTAC-TTACAGTATTCCATTTGCACTAGCGTCCAT-TTTCTCA 1352 |||| || || | ||||||| || |||||||| ||||||||||| ||||| ||| ||| Sbjct 1389 GTATTCCTCAA-G-CCATTACGTTT-AGTATTCCTTTTGCACTAGCTTCCATATTT-TCA 1444 Query 1353 ACCAATTCCGGTGCCGGCCAAGGACTTTCATTAGGCGTTTTAAATATAGCGATTTGTA-T 1411 ||||||||||||||||||||||||||||| |||| ||| | ||| |||| ||| || | Sbjct 1445 ACCAATTCCGGTGCCGGCCAAGGACTTTCCCTAGGTGTTCTGAATCTAGCCATT-GTCGT 1503 Query 1412 ACCACAAATGATAGTATCAT-TCTCAAGTGGACCATTGGACGCTCAATTCGGCGGTGGAA 1470 || || ||| | ||||| | | | |||||||||| |||| | |||||| ||||||| Sbjct 1504 CCCTCAGATGGTTGTATC-TGTGGGAGGTGGACCATTCGACGAACTATTCGGTGGTGGAA 1562 Query 1471 ACCTACCTTCATTTGTGGTCGGAGCAATTGCCGCGGCGGTTAGTGGAGTCTTAGCGTTAA 1530 || | || |||||||| | ||||| || || || ||||| ||||| || || ||||||| Sbjct 1563 ACATTCCAGCATTTGTGTTAGGAGCGATCGCGGCAGCGGTAAGTGGCGTATTGGCGTTAA 1622 Query 1531 CCGTTTTACCTTCACCGCCTCCGGA 1555 | || || ||||| ||||||||||| Sbjct 1623 CGGTGTTGCCTTCGCCGCCTCCGGA 1647 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 67724455610 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5