BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G73080.1
Length=3552
Score E
Sequences producing significant alignments: (Bits) Value
Ahg908919 jgi|Araly1|908919|Al_scaffold_0002_2000 5016 0.0
Ahg476437 jgi|Araly1|476437|fgenesh2_kg.2__1567__AT1G73066.1 1563 0.0
Ahg471987 jgi|Araly1|471987|fgenesh2_kg.1__1941__AT1G17750.1 610 2e-173
> Ahg908919 jgi|Araly1|908919|Al_scaffold_0002_2000
Length=3369
Score = 5016 bits (2716), Expect = 0.0
Identities = 3165/3383 (94%), Gaps = 25/3383 (1%)
Strand=Plus/Plus
Query 1 ATGAAGAATCTTGGGGGGTTGTTCAAAATTCTTCTGCTTTTCTTCTGTCTCTTTCTATCG 60
|||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||
Sbjct 1 ATGAAGAATCTT---GGGTTGTTCAAAATTCTTCTTCTTTTCTTCTGTCTCTTTCTCTCG 57
Query 61 ACCCACATAATTTCCGTTTCTTGTTTAAACTCAGATGGGCTAACTCTACTCTCTCTTCTG 120
||||||||| |||| ||||||||| |||||||||||||| || |||||||||| ||||||
Sbjct 58 ACCCACATAGTTTCTGTTTCTTGTCTAAACTCAGATGGGTTAGCTCTACTCTCGCTTCTG 117
Query 121 AAGCATTTGGATAGAGTACCACCACAAGTTACTTCGACATGGAAAATAAACGCATCTGAA 180
||||||||||||| ||||||||| ||||| |||||||||||||| |||||||||||||||
Sbjct 118 AAGCATTTGGATAAAGTACCACCTCAAGTAACTTCGACATGGAAGATAAACGCATCTGAA 177
Query 181 GCAACTCCATGTAACTGGTTCGGTATCACTTGTGACGATTCTAAGAATGTTGCGTCTCTC 240
||||| |||||||||||||| |||||||||||||| |||||||||||||||||| |||||
Sbjct 178 GCAACCCCATGTAACTGGTTTGGTATCACTTGTGATGATTCTAAGAATGTTGCGGCTCTC 237
Query 241 AACTTCACTCGTTCTAGGGTTTCAGGTCAATTGGGTCCGGAAATTGGGGAGCTCAAAAGC 300
|||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct 238 AACTTCACTCGTTCTAGGGTTTCAGGTCAATTGGGTCCTGAAATTGGAGAGCTCAAAAGC 297
Query 301 TTGCAGATTTTGGATCTGAGTACTAACAATTTCTCCGGGACTATACCTTCCACTTTAGGA 360
||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||
Sbjct 298 TTGCAGATTTTGGATCTGAGTACTAACAATTTCTCTGGGACTATACCTTCCAGTTTAGGA 357
Query 361 AACTGTACCAAACTCGCTACTCTAGATTTGTCTGAAAATGGATTCTCTGATAAGATCCCA 420
||||||||||| |||| |||||||||||||||||||||||||||| ||| ||||||||||
Sbjct 358 AACTGTACCAAGCTCGTTACTCTAGATTTGTCTGAAAATGGATTCACTGGTAAGATCCCA 417
Query 421 GATACTCTCGATAGCTTGAAGAGGTTGGAGGTGCTTTATCTTTACATAAACTTCCTCACT 480
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 418 GATACTCTCGATAGCTTGAAGAGCTTGGAGGTGCTTTATCTTTACATAAACTTCCTCACT 477
Query 481 GGTGAGTTACCTGAATCCTTGTTTCGAATTCCGAAGCTGCAGGTTTTATATCTTGACTAT 540
|||||||||||||||||||||||||||||||||| | ||||| ||||| ||||||| |||
Sbjct 478 GGTGAGTTACCTGAATCCTTGTTTCGAATTCCGAGGTTGCAGATTTTAAATCTTGAGTAT 537
Query 541 AACAATCTCACCGGTCCGATTCCTCAAAGTATTGGTGATGCTAAGGAGCTTGTGGAGCTG 600
|||||| | |||||||||||||| |||||| |||||||||||||||||||| | || ||
Sbjct 538 AACAATTTAACCGGTCCGATTCCGCAAAGTGTTGGTGATGCTAAGGAGCTTCTTGATCTC 597
Query 601 AGTATGTATGCGAATCAGTTCTCTGGTAACATCCCTGAGTCGATTGGGAA-TAGCAGTAG 659
|||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||
Sbjct 598 AGTATGTATGCGAATCAGTTTTCTGGTAACATCCCTGAGTCGATTGGGAACT-GCAGTAG 656
Query 660 TCTGCAGATTCTTTATTTGCACAGGAACAAGTTAGTTGGTTCATTACCTGAAAGTCTCAA 719
||||||| || | ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 657 TCTGCAGGTTGTGTATTTGCACAGGAACAAGTTAGTTGGTTCGTTACCTGAAAGTCTCAA 716
Query 720 TCTTTTGGGGAATCTCACT-ACTCTGTTTGTTGGTAACAACAGTCTACAAGGGCCGGTTC 778
||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||
Sbjct 717 TCTTTTGGGGAATCTCACTGA-TCTATTTGTTGGTAACAACAGTCTACAAGGGCCGGTTC 775
Query 779 GTTTCGGATCACCTAATTGCAAGAATTTGTTGACTTTAGATTTGTCATACAATGAATTCG 838
||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct 776 GTTTCGGATCATCTAATTGCAAGAATTTGTTGACTTTAGATTTGTCCTACAACGAATTCG 835
Query 839 AAGGCGGTGTTCCACCTGCATTGGGAAATTGCAGTAGCCTTGACGCTTTAGTCATTGT-G 897
|||||||||||||| ||||||||||||||||||||| |||||||||| |||| ||||| |
Sbjct 836 AAGGCGGTGTTCCAGCTGCATTGGGAAATTGCAGTAACCTTGACGCTCTAGTGATTGTGG 895
Query 898 AGTGGTAACTTGTCAGGTACAATCCCTTCCTCATTGGGTATGTTGAAGAATCTCACAATT 957
| ||||||||||||||||||||| |||||||||||||||||||| ||||| || ||| ||
Sbjct 896 A-TGGTAACTTGTCAGGTACAATTCCTTCCTCATTGGGTATGTTAAAGAAGCTTACAGTT 954
Query 958 CTTAACCTTTCCGAGAATCGTCTCTCTGGGAGTATCCCCGCAGAGCTCGGGAACTGCAGT 1017
| |||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct 955 ATAAACCTTTCCGAGAATCGTCTCTCTGGGAGTATCCCCGCAGAGCTCGGGAATTGTAGT 1014
Query 1018 AGCTTGAACTTGTTGAAGCTGAACGATAACCAGCTTGTAGGCGGA-ATACCGAGTGCATT 1076
||||||| |||||||||||||||| |||||||||||| ||| || ||||||||| ||||
Sbjct 1015 AGCTTGAGCTTGTTGAAGCTGAACAATAACCAGCTTGGAGG-TGAGATACCGAGTACATT 1073
Query 1077 AGGTAAGCTGAGGAAGCTAGAAAGTCTGGAGCTTTTCGAAAACCGGTTTTCGGGTGAGAT 1136
|||||||| | ||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1074 GGGTAAGCTTAAGAAACTAGAAAGTTTGGAGCTTTTCGAAAACCGGTTTTCGGGTGAGAT 1133
Query 1137 TCCTATTGAGATATGGAAGAGTCAGAGTCTTACGCAGTTGCTAGTTTATCAAAACAATCT 1196
|||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1134 TCCTATGGAAATATGGAAGAGTCAGAGTCTTACGCAGTTGCTAGTTTATCAAAACAATCT 1193
Query 1197 CACTGGTGAACTACCTGTGGAAATGACTGAGATGAAGAAG-CTAAAGATCGCTACGCTGT 1255
||| || |||||||||||||||||||||||||||||| | ||||||||||| |||||||
Sbjct 1194 CACAGGAGAACTACCTGTGGAAATGACTGAGATGAAG-CGTCTAAAGATCGCGACGCTGT 1252
Query 1256 TCAACAACAGCTTTTATGGAGCGATACCACCGGGTTTAGGTGTGAACAGCAGCTTAGAAG 1315
|||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||
Sbjct 1253 TCAACAACAGTTTTTATGGAGCTATACCATCGGGTTTAGGTGTGAACAGCAGCTTAGAAG 1312
Query 1316 AGGTTGACTTTATTGGTAACAAACTTACAGGAGAGATACCGCCAAATCTATGCCATGGAA 1375
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1313 AGGTTGACTTTATTGGTAACAAACTTACAGGAGAGATACCGCCGAATCTATGCCATGGAA 1372
Query 1376 GGAAGTTGAGAATACTCAACTTGGGTTCTAATCTGCTTCATGGTACAATACCAGCTTCTA 1435
||||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||
Sbjct 1373 GGAAGTTGAGAATACTCAATTTGGGTTCTAATCTGCTTCATGGCACAATACCAACTTCTA 1432
Query 1436 TTGGTCACTGTAAGACCATCAGGAGATTCATCCTTAGAGAAAATAACCTTTCAGGTCTTC 1495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1433 TTGGTCACTGTAAGACCATCAGGAGATTCATCCTTAGAGAAAATAACCTTTCAGGTCTTC 1492
Query 1496 TTCCTGAGTTTTCTCAGGATCATAGTCTTT-CTTTTCTTGATTTCAATAGCAACAACTTC 1554
| ||||||||||||| ||||||||| |||| |||| |||||||||||||||||||||||
Sbjct 1493 TACCTGAGTTTTCTCGGGATCATAGCCTTTTCTTT-CTTGATTTCAATAGCAACAACTTT 1551
Query 1555 GAAGGACCAATCCCGGGCAGCCTCGGAAGCTGTAAGAATCTCTCGAGTATTAACCTATCT 1614
| ||||||||||||| |||||||||||||||||| |||||||||||| || ||||| |||
Sbjct 1552 GTAGGACCAATCCCGCGCAGCCTCGGAAGCTGTAGGAATCTCTCGAGCATCAACCTGTCT 1611
Query 1615 CGAAACAGA-TTCACGGGGCAGATACCTCCACAACTTGGGAATCTACAAAACCTTGGTTA 1673
||||||| | || ||||| |||||||||||||||||||||||| ||||||||||||| ||
Sbjct 1612 CGAAACAAACTT-ACGGGACAGATACCTCCACAACTTGGGAATTTACAAAACCTTGGCTA 1670
Query 1674 CATGAATCTTTCTCGTAATCTTCTTGAAGGGTCTCTACCAGCTCAGCTATCTAACTGTGT 1733
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
Sbjct 1671 TTTGAATCTTTCTCGTAATCTTCTTGAAGGCTCTCTACCAGCTCAGCTATCTAACTGTAT 1730
Query 1734 GAGTT-TAGAGCGTTTTGATGTTGGCTTCAACTCATTAAACGGTTC-AGTTCCTTCAAAC 1791
|| || ||||||||||||||||||| |||||||||||||||||||| | |||| ||||||
Sbjct 1731 GA-TTATAGAGCGTTTTGATGTTGGGTTCAACTCATTAAACGGTTCTA-TTCCCTCAAAC 1788
Query 1792 TTTAGTAACTGGAAAGGCTTGACGACTTTAGTTCTCAGCGAGAACCGGTTTTCAGGAGGT 1851
| ||||||||||||||||||| ||||||| ||||| ||||| ||||||||||||||||||
Sbjct 1789 TATAGTAACTGGAAAGGCTTGGCGACTTTGGTTCTTAGCGATAACCGGTTTTCAGGAGGT 1848
Query 1852 ATTCCACAGTTCTTGCCTGAGCTTAAGAAGCTGTCAACTCTGCAGATTGCTAGAAATGCT 1911
||||| |||||||| ||||||||||| |||||||||||||||||||||||| ||||||||
Sbjct 1849 ATTCCGCAGTTCTTTCCTGAGCTTAAAAAGCTGTCAACTCTGCAGATTGCTCGAAATGCT 1908
Query 1912 TTTGGTGGTGAGATTCCTTCGTCGATTGGGTTGATAGAGGATCTGATCTATGACTTGGAC 1971
|||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||
Sbjct 1909 TTTGGTGGTGAGATTCCTTCGTCGCTTGGGTTGATAGAGGATCTGATCTATGATTTGGAC 1968
Query 1972 CTTAGTGGAAACGGATTGACAGGTGAAATTCCAGCCAAGTTGGGAGATCTCATCAAGTTA 2031
||||| || ||||||||||||||||||||||||||||||||||| ||||| | |||||||
Sbjct 1969 CTTAGCGGGAACGGATTGACAGGTGAAATTCCAGCCAAGTTGGGGGATCTTAACAAGTTA 2028
Query 2032 ACAAGACTCAACATATCTAACAACAATTTGACAGGATCTTTATCGGTTCTCAAAGGTCTT 2091
||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct 2029 ACAAGACTCAACATATCCAACAACAATTTGACAGGATCTTTATCGGTTCTTAAAGGTCTT 2088
Query 2092 ACCTCATTGCTACATGTTGATGTCTCCAACAATCAGTTCACAGGTCCAATACCAGATAAC 2151
||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||
Sbjct 2089 ACCTCATTGCTACATATTGATGTCTCCAACAATCAGTTCACCGGTCCAATACCAGAAAAC 2148
Query 2152 TTGGAGGGTCAGTTGTTATCTGAGCCGTCGTCGTTTTCAGGAAATCCAAACCTCTGCATT 2211
|||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||
Sbjct 2149 TTGGAGGGTCAGTTGTTATCTGAGCCATCGTCGTTTTCAGGAAATCCCAACCTTTGCATT 2208
Query 2212 CCACATTCCTTCTCTGCTAGCAACAATAGCCGCAGCGCGTTAAAGTACTGTAAAGATCAA 2271
|||||||||||||||| |||||||||||||||||||| |||||| ||||| || ||||||
Sbjct 2209 CCACATTCCTTCTCTGTTAGCAACAATAGCCGCAGCGAGTTAAATTACTGCAAGGATCAA 2268
Query 2272 TCTAAAAGCAGGAAGAGTGGCCTTAGCACCTGGCAAATCGTGCTAATAGCGGTCTTATCG 2331
||||||| ||| || ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2269 TCTAAAAACAGAAAAAGTGGCCTTAGCACCTGGCAAATCGTGCTTATAGCGGTCTTATCC 2328
Query 2332 TCTTTATTAGTCTTGGTTGTGGTCCTTGCTCTTGTTTTCATTTGCCTACGTCGTCGCAAA 2391
|||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2329 TCTTTATTCGTCTTGGTTGTGGTTCTTGCTCTTGTTTTCATTTGCCTACGTCGTCGCAAA 2388
Query 2392 GGAAGACCAGAGAAAGATGCTTATGTCTTCACTCAGGAGGAAGGCCCATCTTTGTTGTTG 2451
||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2389 GGAAGACCAGAAAAAGATGCTTATGTCTTCACCCAGGAGGAAGGCCCATCTTTGTTGTTG 2448
Query 2452 AACAAAGTTCTTGCAGCAACTGACAATCTAAATGAAAAGTACACCATTGGAAGAGGAGCT 2511
|||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct 2449 AACAAAGTTCTTGCAGCAACTGACAATCTAAACGAAAAGTACATCATTGGAAGAGGAGCT 2508
Query 2512 CATGGAATTGTGTACAGAGCTTCTTTAGGCTCCGGAAAGGTCTACGCTGTGAAGAGACTT 2571
|| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2509 CACGGAATTGTGTACAGAGCTTCTTTAGGCTCGGGAAAGGTCTACGCTGTGAAGAGACTT 2568
Query 2572 GTATTCGCGTCTCACATCCGCGCTAACCAGAGTATGATGAGGGAGATTGATACAATCGGT 2631
|| ||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 2569 GTCTTCGCATCTCACATCCGCGCTAACCAGAGTATGATGAGAGAGATCGATACAATCGGC 2628
Query 2632 AAAGTCAGGCACAGGAATCTGATTAAGTTAGAAGGGTTTTGGCTGAGGAAAGACGACGGT 2691
||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||
Sbjct 2629 AAAGTCAGGCACAGGAATCTGATCAAGTTAGAAGGGTTTTGGCTGAGGAAAGATGATGGT 2688
Query 2692 TTAATGCTGTATAGATACATGCCAAAAGGAAGTCTTTACGACGTTCTCCACGGTGTTAGC 2751
|| |||||||||||||||||||| |||||||| || ||||| |||||||| |||||||||
Sbjct 2689 TTGATGCTGTATAGATACATGCCCAAAGGAAGCCTGTACGATGTTCTCCATGGTGTTAGC 2748
Query 2752 CCGAAAGAAAATGTGCTAGACTGGTCTGCACGGTACAATGTAGCACTTGGTGTCGCTCAT 2811
|| ||||||||||| ||||||||||||||||||||||| ||||| || |||||||||||
Sbjct 2749 CCAAAAGAAAATGTACTAGACTGGTCTGCACGGTACAACGTAGCGCTCGGTGTCGCTCAC 2808
Query 2812 GGACTAGCCTATCTACACTATGACTGCCATCCCCCGATTGTTCACCGTGACATCAAACCA 2871
||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2809 GGACTGGCCTATCTACACTATGACTGTCATCCCCCGATTGTTCACCGTGACATCAAACCA 2868
Query 2872 GAGAACATACTCATGGACTCAGATTTGGAGCCTCACATTGGGGATTTCGGTTTGGCTCGC 2931
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2869 GAGAACATACTCATGGACTCGGATTTGGAGCCTCACATTGGGGATTTCGGTTTGGCTCGC 2928
Query 2932 CTTCTTGATGACTCAACGGTTTCAACTGCAACTGTTACAGGCACCACCGGCTACATTGCA 2991
||||| ||||||||||||||||||||||||||||||||||| ||||| || |||||||||
Sbjct 2929 CTTCTCGATGACTCAACGGTTTCAACTGCAACTGTTACAGGAACCACTGGGTACATTGCA 2988
Query 2992 CCAGAAAACGCTTTCAAAACCGTGAGGGGAAGAGAATCAGACGTTTACAGTTATGGAGTC 3051
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 2989 CCAGAAAACGCTTTCAAAACCGTGAGGGGAAGAGAATCCGACGTTTACAGTTATGGAGTC 3048
Query 3052 GTGTTACTTGAGCTGGTTACGAGGAAGAGAGCGGTGGACAAATCTTTCCCGGAAAGTACA 3111
|||||||| |||||||| |||||||||||||||||||||||||| |||||||| ||||||
Sbjct 3049 GTGTTACTCGAGCTGGTAACGAGGAAGAGAGCGGTGGACAAATCCTTCCCGGACAGTACA 3108
Query 3112 GATATAGTAAGCTGGGTGAGATCTGCCTTGAGCAGCAGCAACAACAATGTGGAGGATATG 3171
||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct 3109 GATATAGTAAGCTGGGTGAGATCTGTATTGAGCAGCAGCAACAACAATGTGGAGGACATG 3168
Query 3172 GTAACAACAATCGTCGATCCGA-TTCTCGTGGACGAGCTTCTGGATTCGAGTCTTAGGGA 3230
|||||||||||| ||||||| | |||| ||||||||||| || ||||||| |||||||||
Sbjct 3169 GTAACAACAATCATCGATCC-ACTTCTGGTGGACGAGCTCCTAGATTCGAATCTTAGGGA 3227
Query 3231 GCAGGTGATGCAAGTGACGGAACTGGCACTGAGTTGTACACAGCAAG-ATCCGGCAATGA 3289
|||||||| |||||||||||||||||||||| |||||| || ||| ||||||||||||
Sbjct 3228 ACAGGTGATCCAAGTGACGGAACTGGCACTGACTTGTACGGAG-AAGGATCCGGCAATGA 3286
Query 3290 GACCAACGATGAGAGATGCGGTGAAACTGTTGGAAGATGTGAAACATCTGGCAAGAAGCT 3349
|||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||
Sbjct 3287 GACCAACGATGAGAGATGCGGTGAAACTGTTGGATGATGTGAAATATCTTGCAAGAAGCT 3346
Query 3350 GCTCCTCTGATTCAGTTCGGTAA 3372
|||||||||||||||||||||||
Sbjct 3347 GCTCCTCTGATTCAGTTCGGTAA 3369
> Ahg476437 jgi|Araly1|476437|fgenesh2_kg.2__1567__AT1G73066.1
Length=1815
Score = 1563 bits (846), Expect = 0.0
Identities = 1438/1716 (84%), Gaps = 72/1716 (4%)
Strand=Plus/Plus
Query 1 ATGAAGAATCTTGGGGGGTTGTTCAAAATTCTTCTGCTTTTCTTCTGTCTCTTTCTATC- 59
||| |||||||| |||||||||||||||||| ||| | |||||||||||| | ||
Sbjct 1 ATGGAGAATCTT---GGGTTGTTCAAAATTCTTTTGC---TATTCTGTCTCTTTGTTTCT 54
Query 60 GACCCACATAATTTCCGTTTCTTGTTTAAACTCAGATGGGCTAACTCTACTCTCTCTTCT 119
| || |||| | || ||||||||| |||| ||||||||| ||||| | ||||| ||||
Sbjct 55 G-GCCGCATAGTCTCTGTTTCTTGTCTAAATTCAGATGGGTTAACTTTGCTCTCGCTTCG 113
Query 120 GAAGCATTTGGATAGAGTACCACCACAAGTT-ACTTCGACATGGAAAATAAACGCATCTG 178
||| ||||||| | |||||||||| || || |||||||||||||| | |||||||||||
Sbjct 114 GAATTATTTGGACAAAGTACCACCAGAA-TTAACTTCGACATGGAAGACAAACGCATCTG 172
Query 179 AAGCAACTCCATGTAACTGGTTCGGTATCACT-TGTGACGATTCTAAGAATGTTGCGTCT 237
|||| ||||||||||||||||| ||||||| | ||||| ||||||||||| ||| |||||
Sbjct 173 AAGCCACTCCATGTAACTGGTTTGGTATCA-TCTGTGATGATTCTAAGAAGGTTACGTCT 231
Query 238 CTCAACTTCACTC-GTTCTAGG-GTTTCAGGTCAATTGGGTCCGGAAATTGGGGAGCTCA 295
||||||||||| | |||| ||| |||||||| | ||||||||| ||||| ||| ||||||
Sbjct 232 CTCAACTTCAC-CGGTTC-AGGTGTTTCAGGCCGATTGGGTCCTGAAATAGGGCAGCTCA 289
Query 296 AAAGCTT-GCAGATTTTGGATCTGAGTACTAACAATTTCTCCGGGACTATACCTTCCACT 354
||||||| | ||||||||||| ||||| ||||||||||||| |||| ||||||||||| |
Sbjct 290 AAAGCTTAG-AGATTTTGGATTTGAGTTCTAACAATTTCTCTGGGATTATACCTTCCAGT 348
Query 355 TTAGGAAACTGTACCAAACTCG-CTACTCTAGATTTGTCTGAAAA-TGGATTCTCTGATA 412
||||| ||||||| ||| | ||| | |||||||||||||| || ||||||| ||
Sbjct 349 TTAGGGAACTGTAGTTCACTGGTGTAC-ATTGATTTGTCTGAAAACAGG-TTCTCTGGTA 406
Query 413 AGATCCCAGATACTCTCGATAGCTTGAAGAGGTTGG-AGGTGCTT-TATCTTTACATAAA 470
||||||| |||||||| | |||||||||||| |||| | | || |||||||||| ||
Sbjct 407 AGATCCCGGATACTCTAGGTAGCTTGAAGAGCTTGGCCGAT--TTGTATCTTTACAGCAA 464
Query 471 CTTCCTCACT-GGTGAGTTACCTGA-ATCCTTGTTTCGAATTCC-GAAGCTGCAGGTT-T 526
||| || | | || ||||| ||| | |||||||||||||||||| | | || | || |
Sbjct 465 CTTTCTTA-TAGGGGAGTTGCCT-AGATCCTTGTTTCGAATTCCGGCA-TTG-A-ATTAT 519
Query 527 -TATATCTTGA-CTATAACAATCTCACC-GGTCCGATTCCTCAAAGTATTGGTGATGCTA 583
| || | || | ||||||| || ||| ||| |||||||||| | ||||||| ||||
Sbjct 520 CTGCATGTGGAGC-ATAACAACCTGACCGGGT-TAATTCCTCAAAATGTTGGTGAGGCTA 577
Query 584 AGGAGCTTGTGGAGCTGAGTATGTATG-CGAATCAGTTCTCTGGTAAC-ATCCCTGAGTC 641
|||| ||| | || ||| || ||| || | |||||||| |||||| || |||||||||||
Sbjct 578 AGGAACTTCTTGATCTGCGTTTGTTTGAC-AATCAGTTTTCTGGT-ACAATCCCTGAGTC 635
Query 642 GATTGGGAA-TAGCAG-TAGTCTGCAGATTCTT-TATTTGCACAGGAACAAGTTAGTTGG 698
||||| || | |||| || ||| ||||| || |||||||||| |||||||||||||||
Sbjct 636 TATTGGAAACT-GCAGCAAG-CTGGAGATT-TTGTATTTGCACAAGAACAAGTTAGTTGG 692
Query 699 TTCATTACCTGAAAGTCTCAATCTTTTGGGGAATCTCACT-ACTCTGTTTGTTGGTAACA 757
|||||| |||| ||||||||||||||||| |||||||||| || |||||||||| || |
Sbjct 693 TTCATTGCCTGCAAGTCTCAATCTTTTGGAGAATCTCACTGAC-CTGTTTGTTGCAAATA 751
Query 758 ACAGTCTACAAGGGCCGGTTC-GTTTCGGATC-ACCTAATTGCAAGAATTTGTTGACTTT 815
|||| |||| ||| | |||| |||| || || ||| || |||| |||| || | |||||
Sbjct 752 ACAGCCTACGAGGAACAGTTCAGTTT-GGTTCAACC-AAATGCAGGAATCTGGTAACTTT 809
Query 816 AGATTTGTCATACAATGAATTCGAAGGCGGTGTTCCACCTGCATTGGGAAATTGCAGTAG 875
|||||||||||||||| |||||||||||||||| || |||| | ||||||||||||||||
Sbjct 810 AGATTTGTCATACAATCAATTCGAAGGCGGTGTCCCTCCTGAACTGGGAAATTGCAGTAG 869
Query 876 CCTTGACGCTTTAGTCATTGTGAGTGGTAACTTGTCAGGTACAATCCCTTCCTCATTGGG 935
||||||||||||||||||||||| |||| |||||||||| ||||||||| ||||||||
Sbjct 870 CCTTGACGCTTTAGTCATTGTGAAAAGTAATTTGTCAGGTAAAATCCCTTCATCATTGGG 929
Query 936 TATGTTGAAGAATCTCACAATTCTTAACCTTTCCGAGAATCGTCTCTCTGGGAGTATCCC 995
|||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 930 TATGTTAAAGAATCTCACAATTCTTAACCTTTCCGAGAATCGTCTTTCTGGGAGTATCCC 989
Query 996 CGCAGAGCTCGGGAACTGCAGTAGCTTGAACTTGTTGAAGCTGAACGATAACCAGCTTGT 1055
||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 990 CGCGGAGCTCGGGAACTGCAGCAGCTTGAACTTGTTGAAGCTGAACGATAACCAGCTTGA 1049
Query 1056 AGGCGGAATACCGAGTGCATTAGGTAAGCTGAGGAAGCTAGAAAGTCTGGAGCTTTTCGA 1115
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct 1050 AGGCGGAATACCGAGTGCATTAGGTAAGCTAAGGAAGCTAGAAAGTCTGGAGCTTTTTGA 1109
Query 1116 AAACCGGTTTTCGGGTGAGATTCCTATTGAGATATGGAAGAGTCAGAGTCTTACGCAGTT 1175
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1110 AAACCGGTTTTCGGGTGAGATTCCTATTGAGATATGGAAGATTCAGAGTCTTACGCAGTT 1169
Query 1176 GCTAGTTTATCAAAACAATCTCACTGGTGAACT-ACCTGT-GGAAATGACTGAGATGAAG 1233
||||||||||| ||||||||||| || ||| | ||| | |||||| || ||| | |||
Sbjct 1170 GCTAGTTTATCGGAACAATCTCACAGG-GAAATTACC-GAAGGAAATAACCGAGCTCAAG 1227
Query 1234 AAGCTAAAGATCGCTACGCTGTTCAACAACAGCTTTTATGGAGCGATACCACCGGGTTTA 1293
|| || ||||| | ||| || || ||||| ||||||||||||| ||||||||| ||||||
Sbjct 1228 AATCTGAAGATTGTTACTCTCTTTAACAATAGCTTTTATGGAGTGATACCACCTGGTTTA 1287
Query 1294 GGTGTGAACAGCAGCTTAGAAGAGG-TTGACTTT-ATTGGTAACAAACTTACAGGAGAGA 1351
||| ||||||||| | |||| || |||| ||| ||||||||||| |||||||| |||
Sbjct 1288 GGTCTGAACAGCAACCTAGA-GATTATTGA-TTTGATTGGTAACAATCTTACAGGTGAGG 1345
Query 1352 TACCGCCAAATCTATGCCATGGAAGGAAGTTGAGAATACTCAACTTGGGTTCTAATCTGC 1411
||||||||||||| |||||||||| || ||||| | | | ||||| || ||||| | ||
Sbjct 1346 TACCGCCAAATCTCTGCCATGGAAAGATGTTGACAGTGTTTAACTTAGGATCTAACCGGC 1405
Query 1412 TTCATGGTACAATACC-AGCTTCTATTGGTCACTGTAAGAC-CATCAGGAGATTCATCCT 1469
||||||| | |||||| | | ||| || |||| || ||||| | | || |||||||| ||
Sbjct 1406 TTCATGGCAAAATACCGA-CATCTGTTAGTCAGTGCAAGACTC-TAAGCAGATTCATTCT 1463
Query 1470 TAGAGAAAATAACCTTTCAGGTCTTCTTCCTGAGTTTTCTCAGGATCATAG-TCTTTCTT 1528
|||||||| |||||||||||| ||||||||||||||||| || |||| || |||||| |
Sbjct 1464 CAGAGAAAACAACCTTTCAGGTGTTCTTCCTGAGTTTTCTAAGAATCA-AGATCTTTCGT 1522
Query 1529 TTCTTGATTTCAATAGCAACAACTTCGAAGGACCAATCCCGGGCAGCCTCGGAAGCTGTA 1588
|||| ||| ||||||||||||||||||||||||||||||| | | ||||||||||||||
Sbjct 1523 TTCTCGATCTCAATAGCAACAACTTCGAAGGACCAATCCCTCGTACCCTCGGAAGCTGTA 1582
Query 1589 AGAATCTCTCGAGTATTAACCTATCTCGAAACA-GATTCACGGGGCAGATACCTCCACAA 1647
||||||| ||| || || || ||| | |||| | | ||||||| | || ||| | ||
Sbjct 1583 GGAATCTCACGACCATCAATCTGTCTAGGAACAAGCT-CACGGGGAATATTCCTAGAGAA 1641
Query 1648 CTTGGGAATCTACAAAACCTTGGTTACATGAATCTT 1683
|||| |||||||||||||||| || || ||||||||
Sbjct 1642 CTTGAGAATCTACAAAACCTTAGTCACCTGAATCTT 1677
> Ahg471987 jgi|Araly1|471987|fgenesh2_kg.1__1941__AT1G17750.1
Length=3355
Score = 610 bits (330), Expect = 2e-173
Identities = 751/950 (79%), Gaps = 45/950 (5%)
Strand=Plus/Plus
Query 2387 GCAAAGGAAGA-CC-AGAGA-AAGATGCTTATGTCTTCACTCAGGAGGAAGGCCCATCTT 2443
||||| || || || ||| | |||||||| || || | | || |||||||| | || |
Sbjct 2279 GCAAAAGAGGAGCCAAGACAGAAGATGCTAATATC--CTCGCA-GAGGAAGGTCTGTCCT 2335
Query 2444 TGTTGTTGAACAAAGTTCTTGCAGCAACTGACAATCTAAATGAAAAGTACACCATTGGAA 2503
||||| ||||||||||||| ||||| |||||||||||| |||| ||||||| ||||||||
Sbjct 2336 TGTTGCTGAACAAAGTTCTAGCAGCCACTGACAATCTAGATGACAAGTACATCATTGGAA 2395
Query 2504 GAGGAGCTCATGGAATTGTGTACAGAGCTTCTTTAGGCTCCGG-AAAGGTCTACGCTGTG 2562
|||||||||||||| |||| ||||||||||||||||| || || || | ||||| |||
Sbjct 2396 GAGGAGCTCATGGAGTTGTTTACAGAGCTTCTTTAGGATCAGGCGAA-GAATACGCCGTG 2454
Query 2563 AAGAGACT-TGTATTCGCGTCTCACATCCGCGCTAACCAG-AGTATGATGAGGGAGATTG 2620
|||| ||| | | || ||| ||||| ||||| |||| | | ||||| ||||||||| |
Sbjct 2455 AAGAAACTCT-TCTTTGCGGAACACATACGCGCAAACC-GAAATATGAAGAGGGAGATCG 2512
Query 2621 ATACAATCGGTAAAGTCAGGCACAGGAATCTGATTAAGTTAGAAGGGTTTTGGCTGAGGA 2680
| |||||||| |||||||||||| ||||| ||| ||||||| | |||||| ||||||
Sbjct 2513 AAACAATCGGGCTAGTCAGGCACAGAAATCTCATTCGGTTAGAAAGATTTTGGATGAGGA 2572
Query 2681 AAGACGACGGTTTAATGCTGTAT-AGATACATGCCAAAAGGAAGTCTTTACGACGTTCTC 2739
|||| || || |||||||||||| || |||||||| |||||||| || |||||||| |
Sbjct 2573 AAGAAGATGGCTTAATGCTGTATCAG-TACATGCCCAAAGGAAGCCTACACGACGTTTTG 2631
Query 2740 CAC-G-GTGTTAGCCCGAAAGAA-AATGTGCTAGACTGGTCTGCACGGTACAATGTAGCA 2796
||| | | || | | | |||| | || || |||||||||||||||| || ||||
Sbjct 2632 CACAGAG-GTAATCAAG-GAGAAGCA-GTTCTTGACTGGTCTGCACGGTTTAACATAGCC 2688
Query 2797 CTTGGTG-TCGCTCATGGACTAGCCTATCTACACTATGACTGCCATCCCCCGATTGTTCA 2855
||||| | | | |||||||| || ||||||||| |||| || ||||| || || ||||
Sbjct 2689 CTTGG-GATTTCACATGGACTGGCGTATCTACACCATGATTGTCATCCACCAATAATTCA 2747
Query 2856 CCGTGACATCAAACCAGAGAACATACTCATGGACTCAGATTTGGAGCCTCACATTGGGGA 2915
|||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||
Sbjct 2748 CCGTGACATCAAACCAGAGAACATACTCATGGACTCGGATTTAGAGCCTCACATTGGAGA 2807
Query 2916 TTTCGGTTTGGCTCGCCTTCTTGATGACTCAACGGTTTCAACTGCAACTGTTACAGGCAC 2975
|||||| |||||||| |||| ||||||||||| |||||||| || || ||||| |||||
Sbjct 2808 TTTCGGATTGGCTCGGATTCTAGATGACTCAACAGTTTCAACGGCCACCGTTACTGGCAC 2867
Query 2976 CACCGGCTACATTGCACCAGAAAACGCTTTCAAAACCGTGAGGGG-AAGAGAATCAGACG 3034
|| || ||||||||||||||||| || | ||| || |||||| | ||| |||||||| |
Sbjct 2868 AACTGGGTACATTGCACCAGAAAATGCGTACAAGACGGTGAGGAGCAAG-GAATCAGATG 2926
Query 3035 TTTACAGTTATGGAGTCGTGTTACTTGAGCTGGTTACGAGGAA-GAGAGCGGTGGACAAA 3093
|||||||||||||||| || || || |||||||| || ||||| |||||| ||||||| |
Sbjct 2927 TTTACAGTTATGGAGTTGTTTTGCTCGAGCTGGTAAC-AGGAAAGAGAGCAGTGGACAGA 2985
Query 3094 TCTTTCCCGGAA-AGTA-CAGATATAGTAAGCTGGGTGAGATCTGCCTTGAGCAGCAGCA 3151
|||||||| ||| | || || |||| || |||||||| ||||||| || | ||||||
Sbjct 2986 TCTTTCCCAGAAGA-TATCA-ATATTGTGAGCTGGGTCAGATCTGTATT-A--AGCAGCT 3040
Query 3152 ACAACAATGTGGAGGATA-TGGTAA-CAACAATCGTCGATCCGATTCTCGTGGACGAGCT 3209
| | ||| || |||| || | | ||||||| ||||| | || ||||| |||||
Sbjct 3041 ATGAGGATGAAGATGATACTGTTGGTC--CAATCGTTGATCCAACACTTGTGGATGAGCT 3098
Query 3210 TCTGGATTCGA-GTCTTAGGGAGCAGGTGATGCAAGTGACGGAACT-GGCACTGAGTTGT 3267
||||||| ||| | || ||||| || | || ||||| || || || ||| || || |||
Sbjct 3099 TCTGGATACGAAG-CTCAGGGAACAAGCAATCCAAGTCACAGA-CTTGGCTCTTAGATGT 3156
Query 3268 ACACAGCAAGAT-CCGGC-AATGAGACCAACGATGAGAGATGCGGTGAAA 3315
|| | ||||| |||| || |||||| | ||| |||||| |||||||
Sbjct 3157 ACGGA-CAAGAGGCCGGGGAAC-AGACCATCCATGCGAGATGTGGTGAAA 3204
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 134152944825
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5