BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G74040.1
Length=2193
Score E
Sequences producing significant alignments: (Bits) Value
Ahg472070 jgi|Araly1|472070|fgenesh2_kg.1__2024__AT1G18500.1 1844 0.0
Ahg476544 jgi|Araly1|476544|fgenesh2_kg.2__1674__AT1G74040.1 1530 0.0
> Ahg472070 jgi|Araly1|472070|fgenesh2_kg.1__2024__AT1G18500.1
Length=2054
Score = 1844 bits (998), Expect = 0.0
Identities = 1454/1678 (87%), Gaps = 15/1678 (1%)
Strand=Plus/Plus
Query 272 CTTCACCTCTACCACCTCATGCTCCTCGCCGTCG--TCCC--AATTACATCCCTAACCGT 327
|||| || ||||||||||| |||||||||| || ||| || ||||||||||||||
Sbjct 185 CTTCTCCACTACCACCTCACACTCCTCGCCGCCGCCGCCCTGAA-TACATCCCTAACCGC 243
Query 328 ATATCCGATCCCAATTACGTCAGAATCTTCGATACAACTCTCCGAGACGGTGAACAGTCT 387
|| |||||||| || |||||| | ||||||||||||||||||| |||||||||||||||
Sbjct 244 ATTTCCGATCCAAACTACGTCCGTGTCTTCGATACAACTCTCCGTGACGGTGAACAGTCT 303
Query 388 CCCGGAGCTACACTAACCTCCAAGGAAAAGCTCGATATCGCTCGTCAATTAGCCAAGCTC 447
|| || |||||||| || ||||||||||||||||| ||||||||||| |||| || |||
Sbjct 304 CCAGGCGCTACACTCACTTCCAAGGAAAAGCTCGACATCGCTCGTCAGCTAGCTAAACTC 363
Query 448 GGAGTCGACATCATCGAAGCTGGATTTCCCGCTGCTTCAAAAGACGATTTCGAAGCTGTT 507
|| || ||||| ||||||||||| ||||| |||||||| || || ||||| ||||| |||
Sbjct 364 GGTGTTGACATTATCGAAGCTGGGTTTCCAGCTGCTTCTAAGGATGATTTTGAAGCGGTT 423
Query 508 AAAACCATAGCTGAGACTGTTGGCAATACCGTCGACGAAAATGGCTATGTCCCTGTAATC 567
|| || |||||||| || |||| || || || || || ||||| ||||| ||||| |||
Sbjct 424 AAGACTATAGCTGAAACAATTGGAAACACTGTTGATGAGAATGGTTATGTTCCTGTTATC 483
Query 568 TGTGGTCTCTCGAGATGTAACAAGAAGGATATTGAGACG-GCTTGGGAAGCTGTGAAGTA 626
||||| ||||| ||||| || |||||||||||||||| | |||||||| ||||| || ||
Sbjct 484 TGTGGACTCTCTAGATGCAATAAGAAGGATATTGAGA-GAGCTTGGGATGCTGTCAAATA 542
Query 627 CGCTAAGCGGCCAAGAATCCATACGTTTATTGCCACTAGTGATATTCATCTGAAGTATAA 686
|||||| ||||| || || ||||| ||||| || || |||||||||||| || || ||||
Sbjct 543 CGCTAAACGGCCTAGGATTCATACTTTTATCGCTACGAGTGATATTCATTTGGAGCATAA 602
Query 687 GTTGAAGAAGAGTAAAGAAGAAGTTATTGAGATCGCTAGGAACATGGTTAGATTCGCCAG 746
||||||| | |||| ||| || || || ||||||||||| |||||||||||||| ||
Sbjct 603 ACTGAAGAAAACCAAAGCAGAGGTCATCGAAATCGCTAGGAATATGGTTAGATTCGCGAG 662
Query 747 AAGCTTGGGATGTGAAGATGTTGAATTTAGTCCAGAAGATGCCGGAAGATCGGAGAGAGA 806
|||||||| || |||||||| || || |||||||||||||| |||||||||||||||||
Sbjct 663 GAGCTTGGGTTGCGAAGATGTCGAGTTCAGTCCAGAAGATGCAGGAAGATCGGAGAGAGA 722
Query 807 GTACTTATACGAGATTCTTGGTGAAGTGATCAAAGCTGGAGCAACCACTCTTAACATACC 866
|||||||||||||||||||||||||||||| ||||| |||||||| || || ||||||||
Sbjct 723 GTACTTATACGAGATTCTTGGTGAAGTGATAAAAGCAGGAGCAACTACACTCAACATACC 782
Query 867 TGACACTGTTGGTATAACCTTGCCTAGTGAGTTTGGTCAGTTGATTGCTGATATTAAAG- 925
||| |||||||||||||| |||||||||||||||||||| |||||| ||||| ||||||
Sbjct 783 TGATACTGTTGGTATAACTTTGCCTAGTGAGTTTGGTCAATTGATTACTGAT-TTAAAGG 841
Query 926 CTAATACTCCTGGGATCCAAAATGTTATAATCTCTACACATTGTCAGAATGATCTTGGAC 985
| |||||||| ||||| |||||||| | ||||| |||||||||||||||||||||||||
Sbjct 842 CCAATACTCCAGGGATTGAAAATGTTGTCATCTCAACACATTGTCAGAATGATCTTGGAC 901
Query 986 TCTCCACCGCCAACACTTTATCTGGTGCACATTCGGGCGCGAGGCAAGTGGAAGTGACTA 1045
|||| || ||||||||||||||||| |||||| | || || ||||| |||||||||||||
Sbjct 902 TCTCTACGGCCAACACTTTATCTGGGGCACATGCAGGTGCCAGGCAGGTGGAAGTGACTA 961
Query 1046 TCAATGGAATTGGCGAAAGAGCTGGAAACGCTTCATTGGAAGAGGTTGTCATGGCCATAA 1105
|||||||||| || |||||||||||||| |||||| ||||||||||||| ||||||||||
Sbjct 962 TCAATGGAATCGGGGAAAGAGCTGGAAATGCTTCACTGGAAGAGGTTGTGATGGCCATAA 1021
Query 1106 AATGCCGTGGAGATCATGTCTTAGGAGGCCTATTTACTGGAATCGATACCCGGCACATTG 1165
||||||||||||||||||| |||||||| |||||||||||||| ||||| ||||||||||
Sbjct 1022 AATGCCGTGGAGATCATGTATTAGGAGGTCTATTTACTGGAATTGATACTCGGCACATTG 1081
Query 1166 TTATGACAAGCAAGATGGTTGAGGAGTACACTGGTATGCAAACGCAGCCCCATAAGGCTA 1225
||||||||||||||||||| || |||||||| || ||||| || ||||| ||||||||||
Sbjct 1082 TTATGACAAGCAAGATGGTGGAAGAGTACACAGGAATGCAGACACAGCCACATAAGGCTA 1141
Query 1226 TTGTAGGAGCAAACGCCTTTGCGCATGAAAGTGGTATTCATCAGGATGGAATGCTGAAGC 1285
|||||||||| || ||||||||||||||||||||||| ||||||||||||||||| || |
Sbjct 1142 TTGTAGGAGCGAATGCCTTTGCGCATGAAAGTGGTATCCATCAGGATGGAATGCTAAAAC 1201
Query 1286 ACAAGGGTACCTATGAAATTATGTCCCCCGAAGAGATTGGGCTTGAGCGATCAAATGATG 1345
|||||||||| ||||||||||| | |||||||||||||| ||||| |||||||||||||
Sbjct 1202 ACAAGGGTACATATGAAATTATATGTCCCGAAGAGATTGGACTTGAACGATCAAATGATG 1261
Query 1346 CTGGCATCGTGCT-GGGAAAGCTTAGTGGGCGTCACGCACTGAAAGACCGTTTAAATGAG 1404
||||||| || || ||| ||||||||||||||||| || |||||||||||||| | ||||
Sbjct 1262 CTGGCATTGT-CTTGGGGAAGCTTAGTGGGCGTCATGCGCTGAAAGACCGTTTGACTGAG 1320
Query 1405 CTCGGTTATGTCCTGGATGATGGGCAGCTAAGCAACC-TTTTCTGGCGTTTCAAAGCTGT 1463
|| |||||| | ||||||| |||||||| | || ||||||||||||||||| ||||
Sbjct 1321 CTTGGTTATCAATTAGATGATGAACAGCTAAGTA-CCATTTTCTGGCGTTTCAAAACTGT 1379
Query 1464 GGCAGAGCaaaaaaaGAGAGTTACCGATGCTGACTTAATAGCTTTAGTATCTGATGAAGT 1523
||| ||||| ||||||| |||||||||||| ||| |||||||||||||||||||||||||
Sbjct 1380 GGCTGAGCAGAAAAAGAAAGTTACCGATGCGGACATAATAGCTTTAGTATCTGATGAAGT 1439
Query 1524 GTTTCAGCCAGAGGCTGTCTGGAAACTCCTGGACATGCAGATAACTTGTGGAACTCTCGG 1583
||||||||||| || || ||||||||||||||||| |||||||||||||||||||||||
Sbjct 1440 TTTTCAGCCAGAAGCCGTGTGGAAACTCCTGGACATTCAGATAACTTGTGGAACTCTCGG 1499
Query 1584 TCTCTCAACATCTACTGTAAAACTTGCTGACTCCGATGGCAAAGAGCATGTAGCTTGTTC 1643
|| |||||| | |||||||||||||||||| | ||||||||||| ||||| ||||||||
Sbjct 1500 GCTTTCAACAGCAACTGTAAAACTTGCTGACACTGATGGCAAAGAACATGTCGCTTGTTC 1559
Query 1644 TGTTGGAACCGGACCTGTAGATGCAGCTTACAAGGCAGTTGATCTTATCGTTAAGGAACC 1703
||||||| || ||||| ||| |||||||||||||||| ||||||||||| ||||||||
Sbjct 1560 CATTGGAACTGGGCCTGTCGATTCAGCTTACAAGGCAGTCGATCTTATCGTAAAGGAACC 1619
Query 1704 TGCGACTCTGCTTGAGTACTCGATGAATGCAGTAACAGAAGGCATTGATGCTATTGCAAC 1763
|||||| |||||||||||||| |||||||||||||||||||| || ||||| || |||||
Sbjct 1620 TGCGACCCTGCTTGAGTACTCAATGAATGCAGTAACAGAAGGGATCGATGCCATCGCAAC 1679
Query 1764 CACACGGGTTCTAATCCGCGGA-GACAACAACTACTCATCAACAAACGCGGTAACGGGTG 1822
|||||| ||||| ||||| ||| | |||||| |||||||| |||||||| ||||| ||||
Sbjct 1680 CACACGAGTTCTTATCCGTGGAAG-CAACAAATACTCATCTACAAACGCAGTAACTGGTG 1738
Query 1823 AATCTGTTGAAAGAACTTTTAGTGGAACCGGAGCAGGAATGGACATTGTTGTGTCGAGCG 1882
|| ||| |||| || ||||||||||| |||||||||||||| ||||| ||||| ||||
Sbjct 1739 AAGAAGTTCAAAGGACCTTTAGTGGAACTGGAGCAGGAATGGATATTGTGGTGTCAAGCG 1798
Query 1883 TTAAAGCTTATGTTGGAGCTTTGAACAAAATGTTGGGTTTCAAAGAACACACCTCCAC 1940
| ||||||||||| ||||| |||||||||||| ||| ||||||||| || || ||||
Sbjct 1799 TCAAAGCTTATGTAGGAGCCTTGAACAAAATGATGGACTTCAAAGAAAACTCCCCCAC 1856
> Ahg476544 jgi|Araly1|476544|fgenesh2_kg.2__1674__AT1G74040.1
Length=2133
Score = 1530 bits (828), Expect = 0.0
Identities = 987/1061 (93%), Gaps = 21/1061 (2%)
Strand=Plus/Plus
Query 32 CCGTCGCCGCCGCCGCCACACTATCATCTCTCTCAGGTTTTTGATTTTCCACGGCAATGG 91
|||||||||||||||||||||||||||||||||| | | ||||||| ||||||||
Sbjct 1 CCGTCGCCGCCGCCGCCACACTATCATCTCTCTC--G---AT--TTTTCCATGGCAATGG 53
Query 92 AGTCTTCGATTCTCAAAAGCCCTAATCTCTCTTCACCATCGTTCGGTGTACCTTCAATTC 151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 54 AGTCTTCGATTCTCAAAAGCCCTAATCTCTCTTCACCATCGTTCGGTGTACCTTCAATTC 113
Query 152 CCGCCTTATCCTCCTCCTCCACCTCACCATTTTCATCTCTTCATCTCCGATCACAGAACC 211
|||| |||| |||||||||||| |||||| |||||||||||| ||||||||||| ||||
Sbjct 114 CCGCATTATGCTCCTCCTCCACGTCACCAATTTCATCTCTTCTTCTCCGATCACTCAACC 173
Query 212 ACCGTACCATCTCTCTTACCACCGCCGGAAAATTCCGTGTCTCGTATTCTCTCTCCGCTT 271
||||| | | | |||||||||| || ||| |||||| || ||||||| ||
Sbjct 174 ACCGT---A-----C-T---GCCGCCGGAAATTTTCGTATCTCGTGCTCACTCTCCGATT 221
Query 272 CTTCACCTCTACCACCTCATGCTCCTCGCCGTCGTCCCAATTACATCCCTAACCGTATAT 331
|||| ||||||||| ||||| ||||||||||||||||| ||||||||||||| || || |
Sbjct 222 CTTCTCCTCTACCATCTCATTCTCCTCGCCGTCGTCCCGATTACATCCCTAATCGCATTT 281
Query 332 CCGATCCCAATTACG-TCAGAATCTTCGATACAACTCTCCGAGACGGTGAACAGTCTCCC 390
||||||||||||||| || |||||||||| || |||||||||||||||||||||||||||
Sbjct 282 CCGATCCCAATTACGTTC-GAATCTTCGACACGACTCTCCGAGACGGTGAACAGTCTCCC 340
Query 391 GGAGCTACACTAACCTCCAAGGAAAAGCTCGATATCGCTCGTCAATTAGCCAAGCTCGGA 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 341 GGAGCTACACTAACCTCCAAGGAAAAGCTCGATATCGCTCGTCAATTAGCCAAGCTCGGA 400
Query 451 GTCGACATCATCGAAGCTGGATTTCCCGCTGCTTCAAAAGACGATTTCGAAGCTGTTAAA 510
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct 401 GTCGACATCATCGAAGCTGGATTTCCTGCTGCTTCAAAAGACGATTTCGAAGCTGTGAAA 460
Query 511 ACCATAGCTGAGACTGTTGGCAATACCGTCGACGAAAATGGCTATGTCCCTGTAATCTGT 570
|||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct 461 ACCATAGCAGAGACTGTTGGCAATACCGTCGACGAAAATGGTTATGTACCTGTAATCTGT 520
Query 571 GGTCTCTCGAGATGTAACAAGAAGGATATTGAGACGGCTTGGGAAGCTGTGAAGTACGCT 630
|| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct 521 GGCCTCTCGAGATGTAACAAGAAGGATATTGAGACTGCTTGGGAGGCTGTGAAGTACGCT 580
Query 631 AAGCGGCCAAGAATCCATACGTTTATTGCCACTAGTGATATTCATCTGAAGTATAAGTTG 690
|| || || |||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct 581 AAACGTCCTAGAATCCATACGTTTATTGCCACTAGTGATATTCATTTGAAGTATAAGCTG 640
Query 691 AAGAAGAGTAAAGAAGAAGTTATTGAGATCGCTAGGAACATGGTTAGATTCGCCAGAAGC 750
|||||||||||||||||||||||||||||||| || || |||||||||||||||||||||
Sbjct 641 AAGAAGAGTAAAGAAGAAGTTATTGAGATCGCAAGAAATATGGTTAGATTCGCCAGAAGC 700
Query 751 TTGGGATGTGAAGATGTTGAATTTAGTCCAGAAGATGCCGGAAGATCGGAGAGAGAGTAC 810
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 701 TTGAGATGTGAAGATGTTGAATTTAGTCCAGAAGATGCCGGAAGATCGGAGAGAGAGTAC 760
Query 811 TTATACGAGATTCTTGGTGAAGTGATCAAAGCTGGAGCAACCACTCTTAACATACCTGAC 870
|||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||
Sbjct 761 TTATACGAGATTCTTGGTGAAGTGATAAAAGCTGGAGCAACAACTCTCAACATACCTGAC 820
Query 871 ACTGTTGGTATAACCTTGCCTAGTGAGTTTGGTCAGTTGATTGCTGATATTAAAGCTAAT 930
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct 821 ACTGTTGGTATAACCTTGCCTAGTGAGTTTGGTCAGTTGATTGCTGATATTAAAACCAAT 880
Query 931 ACTCCTGGGATCCAAAATGTTATAATCTCTACACATTGTCAGAATGATCTTGGACTCTCC 990
|||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 881 ACTCGTGGGATCCAAAATGTTATAAGCTCTACACATTGTCAGAATGATCTTGGACTCTCA 940
Query 991 ACCGCCAACACTTTATCTGGTGCACATTCGGGCGCGAGGCAAGTGGAAGTGACTATCAAT 1050
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 941 ACCGCCAATACTTTATCTGGTGCACATTCGGGCGCGAGGCAAGTGGAAGTGACTATCAAT 1000
Query 1051 GGAATTGGCGAAAGAGCTGGAAACGCTTCATTGGAAGAGGT 1091
|||||||||||||||||||||||||||||||| ||||||||
Sbjct 1001 GGAATTGGCGAAAGAGCTGGAAACGCTTCATTAGAAGAGGT 1041
Score = 1399 bits (757), Expect = 0.0
Identities = 872/924 (94%), Gaps = 21/924 (2%)
Strand=Plus/Plus
Query 1270 GATGGAATGCTGAAGCACAAGGGTACCTATGAAATTATGTCCCCCGAAGAGATTGGGCTT 1329
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1214 GATGGAATGCTGAAGCACAAGGGTACCTATGAAATTATGTCCCCCGAAGAGATTGGACTT 1273
Query 1330 GAGCGATCAAATGATGCTGGCATCGTGCTGGGAAAGCTTAGTGGGCGTCACGCACTGAAA 1389
||||||||||||| |||||||| ||| |||| ||||||||||||||||||||| ||| |
Sbjct 1274 CAGCGATCAAATGAAGCTGGCATTGTGTTGGGGAAGCTTAGTGGGCGTCACGCATTGAGA 1333
Query 1390 GACCGTTTAAATGAGCTCGGTTATGTCCTGGATGATGGGCAGCTAAGCAACCTTTTCTGG 1449
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct 1334 GACCGTTTAAATGAGCTCGGTTATGTCCTGGATGATGGACAGCTAAGCAACCTTTTTTGG 1393
Query 1450 CGTTTCAAAGCTGTGGCAGAGCaaaaaaaGAGAGTTACCGATGCTGACTTAATAGCTTTA 1509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1394 CGTTTCAAAGCTGTGGCAGAGCAAAAAAAGAGAGTTACCGATGCTGACTTAATAGCTTTA 1453
Query 1510 GTATCTGATGAAGTGTTTCAGCCAGAGGCTGTCTGGAAACTCCTGGACATGCAGATAACT 1569
|| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1454 GTCTCTGATGAAGTATTTCAGCCAGAGGCTGTGTGGAAACTCCTGGACATGCAGATAACT 1513
Query 1570 TGTGGAACTCTCGGTCTCTCAACATCTACTGTAAAACTTGCTGACTCCGATGGCAAAGAG 1629
|||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct 1514 TGTGGAACTCTCGGTCTCTCAACATCAACTGTAAAACTTGCCGACTCCGATGGCAAAGAG 1573
Query 1630 CATGTAGCTTGTTCTGTTGGAACCGGACCTGTAGATGCAGCTTACAAGGCAGTTGATCTT 1689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1574 CATGTAGCTTGTTCTGTTGGAACCGGACCTGTAGATGCAGCTTACAAGGCAGTTGATCTT 1633
Query 1690 ATCGTTAAGGAACCTGCGACTCTGCTTGAGTACTCGATGAATGCAGTAACAGAAGGCATT 1749
||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1634 ATCGTAAAGGAACCTGCGACTCTACTTGAGTACTCGATGAATGCAGTAACAGAAGGCATT 1693
Query 1750 GATGCTATTGCAACCACACGGGTTCTAATCCGCGGAGACAACAACTACTCATCAACAAAC 1809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1694 GATGCTATTGCAACCACACGGGTTCTAATCCGCGGAGACAACAACTACTCATCAACAAAC 1753
Query 1810 GCGGTAACGGGTGAATCTGTTGAAAGAACTTTTAGTGGAACCGGAGCAGGAATGGACATT 1869
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1754 GCGGTAACCGGTGAATCTGTTGAAAGAACTTTTAGTGGAACCGGAGCAGGAATGGACATT 1813
Query 1870 GTTGTGTCGAGCGTTAAAGCTTATGTTGGAGCTTTGAACAAAATGTTGGGTTTCAAAGAA 1929
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1814 GTGGTGTCGAGCGTTAAAGCTTATGTTGGAGCTTTGAACAAAATGTTGGGTTTCAAAGAA 1873
Query 1930 CACACCTCCACTTTAAGTAAAACCCCTTTGGAGACCAACGAA-GTCCCTGCCTGAAGAAA 1988
|| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct 1874 CATTCCTCCACTTTAAGTAAAACCCCTTTGGAGACCAAC-AATGTCCCTGCCTGAAGAAA 1932
Query 1989 ATCTTACCTGCAAATCTCAGAGATCAAATCACAATTTAGATGAGTAAACGTCTAAAAGAt 2048
||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||
Sbjct 1933 ATCTTACCTGCAAATCTCAGAGATCAA-TGACAATTTAGATGAGTAAAAGTCTAAAAGAT 1991
Query 2049 ttttattttttGTTACCGTTAT-----TG-T-T----TGTATAAAAAGAATATGAGTTTT 2097
|| || ||||||||||||||| || | | |||||||||||||||||||||||
Sbjct 1992 TTCTAATTTTTGTTACCGTTAAAGAAATGGTATCGAATGTATAAAAAGAATATGAGTTTT 2051
Query 2098 GGTTTACTAAAATAACTATGATATAAAA-CAGAGTATTTGGTTAAAACATTGAAACA--- 2153
||||| || |||||||||| | |||||| | ||||||||||||||| ||||||||||
Sbjct 2052 GGTTTGCTGAAATAACTATAACATAAAATC-GAGTATTTGGTTAAA-CATTGAAACATGC 2109
Query 2154 A-GAACAAATTTTCTATAAATAGT 2176
| |||||| |||||||||||||||
Sbjct 2110 AAGAACAACTTTTCTATAAATAGT 2133
Score = 250 bits (135), Expect = 3e-65
Identities = 137/138 (99%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 1091 TTGTCATGGCCATAAAATGCCGTGGAGATCATGTCTTAGGAGGCCTATTTACTGGAATCG 1150
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1077 TTGTCATGGCCATAAAATGCCGTGGAGATCATGTCTTAGGAGGCCTATTTACTGGAATTG 1136
Query 1151 ATACCCGGCACATTGTTATGACAAGCAAGATGGTTGAGGAGTACACTGGTATGCAAACGC 1210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1137 ATACCCGGCACATTGTTATGACAAGCAAGATGGTTGAGGAGTACACTGGTATGCAAACGC 1196
Query 1211 AGCCCCATAAGGCTATTG 1228
||||||||||||||||||
Sbjct 1197 AGCCCCATAAGGCTATTG 1214
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 82541560915
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5