BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G74160.1
Length=4096
Score E
Sequences producing significant alignments: (Bits) Value
Ahg476557 jgi|Araly1|476557|fgenesh2_kg.2__1687__AT1G74160.1 6069 0.0
Ahg472083 jgi|Araly1|472083|fgenesh2_kg.1__2037__AT1G18620.2 130 9e-29
> Ahg476557 jgi|Araly1|476557|fgenesh2_kg.2__1687__AT1G74160.1
Length=4089
Score = 6069 bits (3286), Expect = 0.0
Identities = 3847/4105 (94%), Gaps = 89/4105 (2%)
Strand=Plus/Plus
Query 34 tctcttcttcttgatttggcggtttctttgctttctgcaactctttcttttcattggttc 93
||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 21 TCTTTTCTTCTTGATTTGGCGGTTTCTCTGCTTTCTGCAACTCTTTCTTTTCATTGGTTC 80
Query 94 tGTAGATTTAAACTCACACATTCCGTGTTTTAGGACAACAAACTTCTCAGACAAAAGGGG 153
|||||| || || | |||||| |||||||||| ||||||||||||||||||||| |
Sbjct 81 TGTAGACTT-AA--CGCACATTTTGTGTTTTAGG---ACAAACTTCTCAGACAAAAGGAG 134
Query 154 CACACATGTTCTAGTGTTCTGTTTATGGTTTAGTAGTTTATTGAAGATTGGATCTAATTA 213
||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct 135 CACACATGTTCTAGTCTTCTGTTTATGGTTTAGTAGTTTATTGACGATTGGATCTAATTA 194
Query 214 CCAAAAGGGTTTTTATCTTTC-TCC----CTCCTTTTGTCTTCAGTGGAATCTGGGAATC 268
||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct 195 CCAAAAGGGTTTTTATCTTTCTTCCTTTTTTCCTTTTGTCTTCAGTGGAATCTGGGAATC 254
Query 269 TTAGGTTTGTAAAAAGGTTTAAACTTTATTTCCTTTTTAAGATCCGTAGGTTTGATTGCT 328
|||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||
Sbjct 255 -TAGGTTTGTAAAAAGGCACAAACTTTATTTCCTTTTTTAGATCCGTAGG-TTGATTGCT 312
Query 329 GTTAGTGTAGGACTCAGATTAATTTAGGGGTTTTCTTGAGCTTTAATTAAGCTGGAGAAG 388
||||||||||||||||||||||||| |||| ||| |||||||||||||||||| | ||
Sbjct 313 GTTAGTGTAGGACTCAGATTAATTTTGGGGGTTT-TTGAGCTTTAATTAAGCT---G-AG 367
Query 389 ACAATGGGTTTCTTCTGATTTGAAATCTTAAAC-GG-tt----tttttCTACAAAGAGAA 442
| | ||||||||||||||||||| ||| || || |||||||||||||||||
Sbjct 368 ----T--G--TCTTCTGATTTGAAATCTT-AACGGGTTTCAAGTTTTTCTACAAAGAGAA 418
Query 443 GGGCTAAAATTTTGGAGTTTTATGAATATGGAAGGTGCGTCATTCTCGTTATAGTTTTAA 502
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 419 AGGCTAAAATTTTGGAGTTATATGAATATGGAAGGTGCGTCATTCTCGTTATAGTTTTAA 478
Query 503 TGGTGGTTACTG-TT--TGAT---GA-TG-GAGAAAGaa-aaaaaGAAAGCTTTTAAAGT 553
|||||||||||| || |||| || || ||||||||| ||||||||||||||||||||
Sbjct 479 TGGTGGTTACTGTTTGATGATGGAGATTGAGAGAAAGAAGAAAAAGAAAGCTTTTAAAGT 538
Query 554 TATCTCTTCCAAATTATTGCAAACACATCATTGAGGCATAAAGTTTGGGTTTTTGGGAAA 613
||||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||
Sbjct 539 TATCTCTTCCAAATTATTGCAAACACATCATTGAGTCAAAAAGTTTGGGTTTTT-GGAAA 597
Query 614 TCAGTAAAGGGGAACACATCA-TAGAAGAAAGCTTTCAAAGCCaaaaag-aaaaaaGGAG 671
||| |||||| |||||||||| | |||||||| |||| ||||||||||| ||||||||||
Sbjct 598 TCAATAAAGGTGAACACATCACT-GAAGAAAGTTTTCTAAGCCAAAAAGAAAAAAAGGAG 656
Query 672 AAGTCTTTTTGAATCTTTAAGTAGAAAGTTTCCGGCGCCGGAGAATTGTTTTTGTGATCT 731
|||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct 657 AAGTCTTTTTGAATCTTTCTGTAGAGAGTTTCCGGCGCCGGAGAATTGTTTTTGTGATCT 716
Query 732 GTAGAAAATGGCTGCGAAGCTTCTGCATTCATTGGCAGATGATAGTGCAGATCTGCAGAA 791
|||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct 717 GTAG-AAATGGCTGCGAAGCTTCTGCATTCGTTGGCAGATGATAGTGCAGATCTTCAGAA 775
Query 792 GCAAATTGGATGTATGAATGGGATTTTTCAAATCTTTGATCGTCACCATGTTCTTACTGG 851
|||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct 776 GCAAATTGGATGTATGAATGGGATTTTTCAAATCTTTGATCGCCACCATGTTCTCACTGG 835
Query 852 CCGACGAAAAAGTCTTACTTTAGGTAATGGAAATGCCATTAACATCAATTATGAAAGAGA 911
||| |||||||| ||||||||||||||||||||||||| || |||||| || || |||||
Sbjct 836 CCGGCGAAAAAGCCTTACTTTAGGTAATGGAAATGCCAATAGCATCAACTACGAGAGAGA 895
Query 912 CTCTGTTGATACAATTTATCAACAAAAAG--A----AA--C-TTTTCAGGACTCCAACAT 962
|||||||||||| |||||||||||||| | || | ||||| |||||||||||
Sbjct 896 GACTGTTGATACAAGTTATCAACAAAAAGACACCGTAAGTCAGTTTCATGACTCCAACAT 955
Query 963 TGGTGGGAATGTGAAAGAGAAGCGAAGGGTTTCAACAGAATCATCTAGAGTTTCTTTCTC 1022
||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 956 TGGCGGAAATGTGAAAGAGAAGCGAAGGGTTTCAACAGAATCATCGAGAGTTTCTTTCTC 1015
Query 1023 ATCTTCGTGCTCTTCCTCCCCATCGTCTTCTGAGTTCAATAGAGGAGTTCAACCTGACGC 1082
|||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 1016 ATCTTCGTGCTCGTCCTCCCCATCCTCTTCTGAGTTCAATAGAGGAGTTCAACCTGAAGC 1075
Query 1083 TTCTGCGTATGACCGAGCTAATTTTCAAGAATCTCCTACAAGTGATCCTGAGATGACTGA 1142
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1076 TTCTGCGTATGACCGAGCCAATTTTCAAGAATCTCCTACAAGTGATCCTGAGATGACTGA 1135
Query 1143 AGGGAATGGATTTTCACATTTGGGACTTGACCTCAGAGATGTTGTGAGAGACTCAATGTA 1202
||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1136 AGGGAATGGGTTTTCACATTTGGGATTTGACCTCAGAGATGTTGTGAGAGACTCAATGTA 1195
Query 1203 CAGAGAAGCCAGAGGGCTTTTGAG-TAAGACTCCAATGACTAGAGAGGAAGTAGTTAGAC 1261
||||||||||||||||||||| | |||| |||||||||| ||||| |||| ||||||||
Sbjct 1196 TAGAGAAGCCAGAGGGCTTTTG-GTTAAGTCTCCAATGACAAGAGATGAAGGAGTTAGAC 1254
Query 1262 AGAGCAGACGAGAGGATTCTCCAAGGCCTTATGGTTTGAAGCAATCAACTCCCATGGATC 1321
||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1255 AGAGCAGACGAGAAGATTCTCCAAGGCCTTATGGTTTGAAGCAATCAACTCCTGTGGATC 1314
Query 1322 TCAATGAGTCCTTCAGAGTTCTAGC-AAGACTTAGAGAAACATCTCAACATTATAACGAG 1380
||||||||||||||||||||||||| || ||||||||||||||||||||||||||| |||
Sbjct 1315 TCAATGAGTCCTTCAGAGTTCTAGCGAA-ACTTAGAGAAACATCTCAACATTATAATGAG 1373
Query 1381 CTTGGCATGAAAGATGCGCCTCGTTACTCAGTTGATTCTCATGATACGTTGAAATCCAGA 1440
|||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct 1374 GTTGGCACGAAAGATGCACCTCGTTACTCAGTTGATTCTCATGATACGCTGAAATCCAGA 1433
Query 1441 CAGAAGCTGAAAGAGTTGCCTAGGCTTTCGCTGGATAGTAGAGAACGAGCGACGCGAAAC 1500
|| ||| ||||||||||||||||||||||||||||||||||||| |||| || |||||||
Sbjct 1434 CACAAGATGAAAGAGTTGCCTAGGCTTTCGCTGGATAGTAGAGATCGAGTGATGCGAAAC 1493
Query 1501 TCCAGTGTTGATCCC-AAATCAAGTAAGCTTTCAGAAAGTTTCAGTGAAAGCTGTTCAAG 1559
||||| ||||| ||| ||| ||||||||||||| ||||||||||||||||| ||||||||
Sbjct 1494 TCCAGCGTTGA-CCCTAAAACAAGTAAGCTTTCTGAAAGTTTCAGTGAAAGTTGTTCAAG 1552
Query 1560 CAGTAGCAAGAAACGGCCTCCCAGTGTTGTAGCAAAGCTCATGGGATTGGAGACATTGCC 1619
||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1553 CAGCAGCAAGAAACGGCCTCCCAGTGTTGTTGCAAAGCTCATGGGATTGGAGACATTGCC 1612
Query 1620 CGGTTCTCCATTGGGTAGAGACATTCATCAGTTTGGTCTGAACAAAACCAACATCTCTGA 1679
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1613 TGGTTCTCCATTGGGTAGAGACATTCATCAGTTTGGTTTGAACAAAACCAACATCTCTGA 1672
Query 1680 CCAAAATGACGATCCATTCTCAAGATCATTGAGGGAGAAAAATCTGAACCGTGCAATCCG 1739
|||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct 1673 CCAAAATGACGATCCATTCTCAAGATCATTGAAGGAGAAAAACCTGAACCGTGCAATCCG 1732
Query 1740 TTTTTCTCCTAGCTCACCGAGAAGCTTGGGGAAGGACCCGGCTTCTCCAAGATGGAGAAA 1799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1733 TTTTTCTCCTAGCTCACCGAGAAGCTTGGGGAAGGACCCGGCTTCTCCAAGATGGAGAAA 1792
Query 1800 CTCTGATTTTGTTATGAAACCTCTATCAAATACAAGATTCCCCGTTGAACCAGCTCCATG 1859
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1793 CTCTGATTTTGTTATGAAACCTCTATCAAATACAAGATTCCCTATTGAACCAGCTCCATG 1852
Query 1860 GAAACACGCTGATAGAAACCGAGTTTTGCAAAAGCAAGCTAGCATGCCTGTGAAAGCGAA 1919
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1853 GAAACAAGCTGATAGAAACCGAGTTTTGCAAAAGCAAGCTAGCATGCCTGTGAAAGCAAA 1912
Query 1920 GCCGTATGAAGCACCTAATTTTCCTCCTACTGTGTACAGTGAAATGGAGCGGAGATTGAA 1979
|| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1913 GCTGTATGAGGCACCTAATTTTCCTCCTACTGTGTACAGTGAAATGGAGCGGAGATTGAA 1972
Query 1980 TGATCTTGAGTTCAAACATTCTGGAAAAGATCTGCGAGCCCTTAAACAAATATTAGAGTC 2039
||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct 1973 TGATCTTGAGTTCAAACATTCTGGAAAAGATCTGCGAGCTCTTAAACAGATATTAGAGTC 2032
Query 2040 TATGCAGTCAAAAGGTTTCCTAGATACTGAGAAACAACAACAATCCACAAACTTTGCAGT 2099
||||||||||| |||||||| |||||||||||||||| ||||||| ||||||||||||
Sbjct 2033 TATGCAGTCAACGGGTTTCCTGGATACTGAGAAACAACTACAATCCTCAAACTTTGCAGC 2092
Query 2100 TCAAAGAGATTATGAAAGAGAAAATTCTGCAACTTCCAACCATGCAATGTCATCCAGAAC 2159
||||||||||||||||| ||||| ||||||||| ||||||||||| ||| |||||||| |
Sbjct 2093 TCAAAGAGATTATGAAATAGAAAGTTCTGCAACCTCCAACCATGCGATGCCATCCAGAGC 2152
Query 2160 GAGAGTTCAG---TC-T--TCTTCATCTAACCAGGTATATCAATCCCCGATTGTGATTAT 2213
|||||| ||| || | ||||||||||||||||||||||| |||||||||||||||||
Sbjct 2153 GAGAGTCCAGTCTTCTTCATCTTCATCTAACCAGGTATATCAGTCCCCGATTGTGATTAT 2212
Query 2214 GAAACCTGCCAAGCTTGTTGAGAAGGCTGGTATTCCTGCGTCATCCCTTATTCCCATTCA 2273
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2213 GAAACCTGCCAAGCTTGTTGAAAAGGCTGGTATTCCTGCGTCATCCCTTATTCCCATTCA 2272
Query 2274 CAGCCTAACTGGCATCAAGAAGATCCGTAGAGAAAAACCTGATGATAAAGGAACTTCAGC 2333
||||||| ||||||| || ||||||||||||||||||||||||||||||| |||||||||
Sbjct 2273 CAGCCTATCTGGCATTAATAAGATCCGTAGAGAAAAACCTGATGATAAAGAAACTTCAGC 2332
Query 2334 AAGTAATAGTAAACGGGTGACAAAAGATTGTAGTCCTGGAAACCGAAGAGCTGAATCATG 2393
|||| | | ||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct 2333 AAGT-A-A-TAAACGGGTGACAAAAGATCGTAGTCCTGGAATCCGAAGAGCTGAATCATG 2389
Query 2394 TACCAGCTCGTTTGATAAGAAATCTGACAGCAGAAATGTGCGGTCTTCTTCAAAAAAGCC 2453
||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2390 TACCAGCTCTTTTGATAAGAAATCTGACAGCAGAAATGTGCGGTCTTCTTCCAAAAAGCC 2449
Query 2454 TCAGCAGGTTTCCAAAGAAAGTGCTTCAAAGAGTTCAGGATCTGTAAGTCCAAGATTACA 2513
|||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||
Sbjct 2450 TCAGCAGGTTTCCAAAGAAAGTACTTCAAAGAGTTCAGGATCTGTTAGTCCAAGATTACA 2509
Query 2514 GCAGAAGAAGCTTGAGTATGATAAGCGTTCACGGCCACCAACCCCTCCTGATTCTAGCAA 2573
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2510 GCAGAAGAAGCTTGAGTATGATAAACGTTCACGGCCACCAACCCCTCCTGATTCTAGCAA 2569
Query 2574 ATCAAGGAAACCGTCAAACCAACAACTTGTGGAATCTACTTCTCCTGGTGGCAGACGTAG 2633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2570 ATCAAGGAAACCGTCAAACCAACAACTTGTGGAATCTACTTCTCCTGGTGGCAGACGTAG 2629
Query 2634 ACCCAAGGG-TCAGAAGAGTTTGCAGCAAGTTGATGACCAACTTAGTCAAGCAAGCAATG 2692
|||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 2630 ACCC-AGGGCTCAGAAGAGTTTGCAGCAAAACGATGACCAACTTAGTCAAGCAAGCAATG 2688
Query 2693 AATCTAGGACGTCAAGTCATGGCATTTGTACTCAATCCGAAACAGAAGCCTCTGCTTGTG 2752
||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||| |
Sbjct 2689 AATCTAGGACGTCAAGTCATGACATTTGTACTCAATCCGAAACAGAAACTTCTGCTTGGG 2748
Query 2753 TAGAAAAATCTACTGAAGCTGATGGTGGTAAAAGTCCATCTGTAATCGAGGCAGCCAAAG 2812
|||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2749 TAGAAAAAGCTACTGAAGCCGATGGTGGTAAAAGTCCATCTGTAATCGAGGCAGCCAAAG 2808
Query 2813 CTGTAGTCTCTAACTTAATGCAGAATAAATCCAGTCCAAGGTTTAGTGAAGATGGATTGT 2872
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2809 CTGTAGTCTCTAACTTAATGCAGAATAAATCCAGTCCAAGGTTTAGTGAAGATGGATTGT 2868
Query 2873 CAGCTAACCTTTCACTAGTTGCTTTGGAACATCCAAGTCCTATTTCTGTTCTCGACGCTT 2932
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2869 CAGCTAACCTTTCACTAGTTGCTTTGGAACATCCAAGTCCTATTTCTGTTCTCGACGCTT 2928
Query 2933 CAACGTACAGAGAGACTGAACCATCACCCGTGAAGACACAAGGTAATGTTGCCCATGATT 2992
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2929 CAACATACAGAGAGACTGAACCATCACCCGTGAAGACACAAGGTAATGTTGCCCATGACT 2988
Query 2993 TTGGTGATGAAAATTGTGAGGACCAGTGGAATCCAGCATACAGTTTCTCAGAAACCACAT 3052
||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2989 TTGGTAATGAACATTGTGAGGACCAGTGGAATCCAGCTTACAGTTTCTCAGAAACCACAT 3048
Query 3053 CAAGCTTTTCGCCAGAGATAAACCGTAAGAAGCTACAGAATGTTGAGCACTTGGTTCAAA 3112
|||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct 3049 CAAGCTTTTCGCCAGAGATAAACCGTAAGAAGCTTCAGAATGTTGAGCACTTAGTTCAAA 3108
Query 3113 AGCTCAGACGATTGAACTCTAGCCATGATGAAGCCAGCCAAGATTATATTGCATCGCTCT 3172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3109 AGCTCAGACGATTGAACTCTAGCCATGATGAAGCCAGCCAAGATTATATTGCATCGCTCT 3168
Query 3173 GTGAGAACGCAGATCCTACCACCGATCATAGATACATTTCTGAGATTCTATTAGCCTCGG 3232
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 3169 GTGAGAACGCAGATCCTACCACCGATCATAGATACATCTCTGAGATTCTATTAGCCTCGG 3228
Query 3233 GTCTTCTCCTAAGAGACCTTGGCTCAGGATTGACAACGTTTCAACTTCACCCTTCTGGCC 3292
|||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct 3229 GTCTTCTCCTCAGAGACCTTGGCTCAGGATTGACAACTTTTCAACTACACCCTTCTGGCC 3288
Query 3293 ACCCAATCAATCCTGAGCTGTTCTTTGTTCTTGAGCAGACAAAGGGAAGCAGCACTACGC 3352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 3289 ACCCAATCAATCCTGAGCTGTTCTTTGTTCTTGAGCAGACAAAGGGAAGCAGCACTATGC 3348
Query 3353 ATCTGTTACACAAAGAAGAAAGTAAGGTTCTGAAAAATGAGAAGCTCAACCGGAAACTTG 3412
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 3349 ATCTGTTACACAAAGAAGAAAGTAAGGTTCTGAAAAATGAGAAGCTCAACCGAAAACTTG 3408
Query 3413 TGTTTGATCTC-GTTAATGAGATTCTGGTGGAGAAACTAGCGTCAGTTGAAGCCACGACG 3471
||||||| | | ||||||||||||||||||||||||||||| ||||||||||||||| ||
Sbjct 3409 TGTTTGA-CACCGTTAATGAGATTCTGGTGGAGAAACTAGCTTCAGTTGAAGCCACGGCG 3467
Query 3472 AATCCATTGATGAAGTCATATGCTAAGGTGACTAAGAAAGCCGTGAGTGCGCAACAACTA 3531
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 3468 AATCCATTGATGAAGTCATATGCTAAGATGACTAAGAAAGCCGTGAGTGCGCAACAACTG 3527
Query 3532 CTGAAAGAACTGTGTTCAGCGATAGAAACACAGCAAAAGCAAGCCACAAAGAGATCAGAA 3591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3528 CTGAAAGAACTGTGTTCAGCGATAGAAACACAGCAAAAGCAAGCCACAAAGAGATCAGAA 3587
Query 3592 AACTTTTTATTGGAAGAAGAAGACGACTTCTTGAAAAGTATACTTGCTGAAGATGTGACG 3651
||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 3588 AACTTCTTATTGGAGGAAGAAGACGACTTCTTGAAAAGTATACTTGCTGAAGATGTGAGG 3647
Query 3652 ATTCGATCTGGGAACTGGGCAGACTTCAGTGGAGAAATGTCAGGATTGGTGCTGGATGTT 3711
|||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct 3648 ATTCGATCTGGGAACTGGGCAGACTTCAGTGGAGAAATCTCAGGATTGGTGCTAGATGTA 3707
Query 3712 GAGAGGCTTGTCTTCAAGGATCTGGTTAATGAAATCGTGCATGCAGAGACAAGCCGTCTG 3771
||||||||| |||| ||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct 3708 GAGAGGCTTATCTTTAAGGATCTGGTTAATGAAATCGTGCATGCAGAGACTAGCCATCTG 3767
Query 3772 CAAGCAAAGTCAGGAAGGCGACGAACGCTTTTTGCTGACCAGTAGCTAAGTCTGTTGAAG 3831
||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||
Sbjct 3768 CAAGCAAAGTCAGGAAGGCGAAGAACGCTTTTTGCAGACCAGTAGCTGGGTCTGTTGAAG 3827
Query 3832 AAGACAAAATATATACACAAGTGGTTTCTCT---------AACTCTTTAACTGTGTT--A 3880
|||||||||||||||| ||||| |||||||| ||||||||||||||||| |
Sbjct 3828 AAGACAAAATATATACGCAAGTAGTTTCTCTTCTTTCTCTAACTCTTTAACTGTGTTCTA 3887
Query 3881 TGTTTCACTCTGGTCCtttttttCGTCTTTGCTGATTCTTATGGTCGTTCTTGGGTCTTC 3940
| ||||||||||||| ||||||| ||||| ||||||||||||| ||||| ||||||||||
Sbjct 3888 TTTTTCACTCTGGTCTTTTTTTT-GTCTT-GCTGATTCTTATGCTCGTTTTTGGGTCTTC 3945
Query 3941 CGTATTCTACAGCAGAATTATAATCATATGGTGTGTTATGTAATTACTGAAGTTCTTGAG 4000
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 3946 TGTATTCTACAGCAGAATAATAATCATATGGTGTGTTATGTAATTACTGAAGTTCTTGAG 4005
Query 4001 ATGGCTACCTAAAGAAAAAACTGTAAAGCGATATAGAAAGAGAATTCATAAAAGAAGAAA 4060
|||||||||| | |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 4006 ATGGCTACCTGGA-AAAAAACTGTAAAGCGATATAGTAAGAGAATTCATAAAAGAAGAAA 4064
Query 4061 GACAACTAATGGAAAATTCTCTGTA 4085
|||| ||||||| || |||||||||
Sbjct 4065 GACAGCTAATGGGAATTTCTCTGTA 4089
> Ahg472083 jgi|Araly1|472083|fgenesh2_kg.1__2037__AT1G18620.2
Length=3295
Score = 130 bits (70), Expect = 9e-29
Identities = 83/89 (93%), Gaps = 2/89 (2%)
Strand=Plus/Plus
Query 2774 ATGGTGGTAAA-AGTCCATCTGTAATCGAGGCAGCCAAAGCTGTAGTCTCTAACTTAATG 2832
||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2187 ATGGTGG-AAAGAGTCCATCTGTAATAGAGGCAGCCAAAGCTGTAGTCTCTAACTTAATA 2245
Query 2833 CAGAATAAATCCAGTCCAAGGTTTAGTGA 2861
|||||||| |||||||||| |||||||||
Sbjct 2246 CAGAATAAGTCCAGTCCAACGTTTAGTGA 2274
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 154856264537
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5