BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G76270.1
Length=2268
Score E
Sequences producing significant alignments: (Bits) Value
Ahg476779 jgi|Araly1|476779|fgenesh2_kg.2__1909__AT1G76270.1 3461 0.0
Ahg312970 jgi|Araly1|312970|fgenesh1_pm.C_scaffold_1001750 1328 0.0
> Ahg476779 jgi|Araly1|476779|fgenesh2_kg.2__1909__AT1G76270.1
Length=2225
Score = 3461 bits (1874), Expect = 0.0
Identities = 2123/2237 (95%), Gaps = 41/2237 (2%)
Strand=Plus/Plus
Query 32 TTTGAAGAAAAGAG---AATA---TTGTTGTTTGTCTCTCGTGATCGAAACAATGCTTTG 85
|||||||||||||| |||| ||||||||||||||||||||||||||||||||||||
Sbjct 19 TTTGAAGAAAAGAGAATAATATTGTTGTTGTTTGTCTCTCGTGATCGAAACAATGCTTTG 78
Query 86 TGATTCTCAAATACAGTAACATTTTCAACATGCTTTGATTCCAAAAATCCAAACTTTCAT 145
||||||||| |||| |||||||| |||||||| |||||||||||| |||||||||||||
Sbjct 79 TGATTCTCATATACTGTAACATTCTCAACATGTTTTGATTCCAAATATCCAAACTTTCA- 137
Query 146 tctctctctcaatctctctATATCTCCGAGCAGCGAGGTAGTTGCACGGCGGCCGCCATG 205
| |||||| ||| ||||||| ||| ||||||||||||||||
Sbjct 138 --------T---TCTCTC----TCT-------GCGAGGTTGTTACACGGCGGCCGCCATG 175
Query 206 AATTTCCATCGGCGGCGCTACCCTTACTACAACcgtctccgtcgtctccttcctctcgtt 265
| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 176 AGTTTCCATCGGCGGCGCTACCCTTACTACAACCGTCTCCGTCGTCTCCTCCCTCTCGTT 235
Query 266 atcgccgtc-tctctatctctcctcattctcttcgcttttctctctttccttgctccgcc 324
|||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||
Sbjct 236 TTCGCCGTCTTCT-TATCTCTCCTCATTCTCTTCGCTTTTCTCTCTTTCCTTGCCCCGTT 294
Query 325 tcctGGAGATTCCGATCGCCTTCCTCCACGCGTTCGCTACTCATCCAATGATGCGATCAA 384
||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 295 TCCCGGCGATTCCGATCGCCTTCCTCCACGCGTTCGCTACTCATCCAATGATGCGATCAA 354
Query 385 AGCTACAGGTTTCCATATTCCGAGAGCTGGAGGCAGATCAGATCGTGATATCTGGCGTTC 444
|||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 355 AGCTACAGGTTTCCGTATTCCGAGAGCTGGAGGCAGATCAGATCGTGACATCTGGCGTTC 414
Query 445 ACGAAATGCTGAATTCTTTTTTGGATGCAGCAATGCAAGCAGCAAATTCGCAAATTCGAA 504
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 415 ACGAAATGCTGAATTCTTTTTTGGATGCAGCAATGCGAGCAGCAAATTCGCAAATTCGAA 474
Query 505 AGCAGTGACGAGAAATGATCGATACTTGGTAATAGCCACTAGTGGTGGTTTGAACCAACA 564
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 475 AGCAGTGACGAGAAATGATCGATACTTGGTAATCGCCACTAGTGGTGGTTTGAACCAACA 534
Query 565 ACGAACTGGAATTGTAGATGCAGTTGTTGCGGCAAGGATTCTAAATGCTACTCTTGTTGT 624
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 535 ACGAACTGGAATTGTAGATGCAGTTGTTGCGGCAAGAATTCTAAATGCTACTCTTGTTGT 594
Query 625 TCCCAAGTTAGACCAGAAGTCTTACTGGAAGGATGCCAGTGACTTCTCGCATATTTTCGA 684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 595 TCCCAAGTTAGACCAGAAGTCTTACTGGAAGGATGCCAGTGACTTCTCGCATATTTTCGA 654
Query 685 TGTTGATTGGTTTATCTCATTTCTGTCTGGA-GACGTCAGAATTATAAAGCAACTTCCAC 743
|||| |||||||||| |||||||||||| || ||||||| ||||||||||||||||||||
Sbjct 655 TGTTCATTGGTTTATATCATTTCTGTCT-GACGACGTCAAAATTATAAAGCAACTTCCAC 713
Query 744 TGAAAGGAGGGCGTACATGGAGTACAAGTAGAATGCGTGTACCACGGAAATGTAACGAGA 803
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 714 TGAAAGGAGGCCGAACATGGAGTACAAGTAGAATGCGTGTACCACGGAAATGTAACGAGA 773
Query 804 GATGCTATATTAACCGTGTTTTACCTGTTCTTCTCAAAAGGCATGCAGTTCAACTGAACA 863
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 774 GATGCTATATTAACCGTGTTTTACCTGTTCTTCACAAAAGGCATGCAGTTCAACTGAACA 833
Query 864 AATTTGACTATAGACTTTCAAACAAGTTGAGTGATGACTTGCAAAAGCTAAGATGTAGAG 923
||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct 834 AATTTGACTATAGACTTTCAAACAAGTTGAGCGATGACTTACAAAAGCTAAGATGTAGAG 893
Query 924 TAAATTACCATGCTCTAAAGTTCACTGATCCTATACTTACAATGGGTAATGAATTGGTCC 983
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 894 TAAATTACCATGCTCTAAAGTTCACTGATCCTATACTTACAATGGGTAATGAATTGGTCC 953
Query 984 GGCGCATGAGATTGAGGAGCAAACACTTCATTGCTTTACATTTAAGGTATGAACCTGATA 1043
|||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct 954 GGCGCATGCGATTGAGGAGCAAACACTTCATTGCTTTACATCTAAGGTTTGAACCTGATA 1013
Query 1044 TGCTTGCATTCTCGGGATGCTATTATGGTGGTGGTGATAAGGAAAGGAGAGAACTTGCAG 1103
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1014 TGCTTGCATTCTCGGGGTGCTATTATGGTGGTGGTGATAAGGAAAGGAGAGAACTTGCAG 1073
Query 1104 CAATTAGAAGGAGATGGAAAACATTACATATTAACAACCCAGAGAAACAGAGGCGACAAG 1163
|||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct 1074 CAATTAGAAGAAGATGGAAAACATTACATATTAACAACCCAGAGAAGCAAAGGCGACAAG 1133
Query 1164 GAAGATGTCCACTCACTCCAGAAGAAGTCGGACTGATGCTTAGAGCTTTGGGATATGGCA 1223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1134 GAAGATGTCCACTCACTCCAGAAGAAGTCGGACTGATGCTTAGAGCTTTGGGATATGGCA 1193
Query 1224 GTGATGTTCATATATATGTCGCGTCTGGTGAAGTATATGGAGGAGAAGAATCATTGGCTC 1283
|||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct 1194 GTGATGTTCATATATATGTCGCATCTGGTGAAGTATATGGAGGAGAAGAATCCTTGGCTC 1253
Query 1284 CTTTGAAAGCACTCTTTCCACACTTCTATTCAAAAGACACTATAGCTACAAAGGAAGAGT 1343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1254 CTTTGAAAGCACTCTTTCCACACTTCTATTCAAAAGACACTATAGCTACAAAGGAAGAGT 1313
Query 1344 TAGAACCTTTTTCTTCGTACTCTTCTAGAATGGCTGCACTCGACTTCCTTGTTTGTGATG 1403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1314 TAGAACCTTTTTCTTCGTACTCTTCTAGAATGGCTGCACTCGACTTCCTTGTTTGTGATG 1373
Query 1404 AAAGCGACGTATTTGTAACCAACAACAATGGCAATATGGCAAAAATATTGGCTGGGAGGA 1463
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1374 AAAGCGACGTATTTGTAACCAACAACAATGGCAATATGGCAAAAATATTGGCTGGAAGGA 1433
Query 1464 GGAGATACTTAGGACATAAACCCACTGTTAGGCCGAATGCAAAAAAGCTTTACAGATTAT 1523
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1434 GGAGATACTTGGGACATAAACCCACTGTTAGGCCGAATGCAAAAAAGCTTTACAGATTAT 1493
Query 1524 TCATGAACAAAGAGAACACGACATGGGAGGAGTTTTCATCTAAAGTCCGTTCGTTTCAGA 1583
|||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||
Sbjct 1494 TCATGAACAAAGAGAACACGACCTGGGAGGAGTTTTCATTTAGAGTCCGTTCGTTTCAGA 1553
Query 1584 GAGGGTTCATGGGAGAGCCAAAGGAAGTAAGAGCTGGTAGAGGTGAATTTCACGAAAACC 1643
|||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct 1554 GAGGGTTCATGGGAGAGCCAAAGGAAGTAAGAGCCGGTAGAGGTGAATTTCACGAGAACC 1613
Query 1644 CATCCACGTGCATATGCGAAGATACAGAGGCTAAGGCAAAGGCGCAATTAGAATCTAGAA 1703
|||| |||||||||||||||||||||||||||||||||||||| ||| | |||||| |||
Sbjct 1614 CATCGACGTGCATATGCGAAGATACAGAGGCTAAGGCAAAGGCACAAATGGAATCTCGAA 1673
Query 1704 AACTTGGAAAGAAAAACAAATCCACTAATAAAGACGCAGCAGTAACTGTAACCAATGATG 1763
||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||
Sbjct 1674 AACTTGGAAAGAAAAACAAATCCACAAATAAAGACGCAGCAGTAACAGTAACTAATGATG 1733
Query 1764 ATCAAACCGAAGAGGATGACCCAGATTGGTCGGAGCCAGACTATGAGGAAGAACAGAGTG 1823
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1734 ATCAAACCGAAGAGGATGAGCCAGATTGGTCGGAGCCAGACTATGAGGAAGAACAGAGTG 1793
Query 1824 ATCTTCAGGACAGAGGATTATACAACGGGACAAGTTTAGATTACGATGATCCATCTACCT 1883
||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1794 ATCTTAAGGACAGAGGATTATACAACGGGACAAGTCTAGATTACGATGATCCATCTACCT 1853
Query 1884 CTGATGAGCCTGAGCTTGAAGCAATGCTATCAGATTAGTTAGATACGCATCAGTGACCTT 1943
||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| |||
Sbjct 1854 CTGATGAGCCTGAGCTTGAAGAAATGCTATCAGATTAGTTAGATTCGCATCAGTGAGCTT 1913
Query 1944 CACATCACTACACTGAATCTGTCCTCTGCTTGGGCACTTCACAGTGAGTTTTCCAACCTT 2003
||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1914 CACATCATTACACTGAATCTATCCTCTGCTTGGGCACTTCACAGTGAGTTTTCCAACCTT 1973
Query 2004 GGTGCTAAGCCTTGTTGTCACCATTTTGCATGTAATGTCTCCTGTACATAGAACCACGCG 2063
|| |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||
Sbjct 1974 GGGGCTAAGCCTTGTTGTCACCATTTTGCATGTAATGTCTCATGTACATAGAACCGCGCG 2033
Query 2064 ATAGAGCATTGTTTTGTTTATCAGGATCTGAGGACAGATCAAtttttttCAGTCATATTT 2123
||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct 2034 ATAGAGCATTGTTTTGTTTATCATGATCTGAGGACAGATCAATTTTTT-CAGTCATATTT 2092
Query 2124 TAGTACTCGGAATTGTGGCTTTACCAGAGAAAG-TAGCTATAGAAAAAGGGAAAACAAGT 2182
||||| |||||||| |||||||||||||| | | | |||| ||||||||||||||||||
Sbjct 2093 TAGTATTCGGAATTATGGCTTTACCAGAGTA-GCT-GCTA--GAAAAAGGGAAAACAAGT 2148
Query 2183 AGGCATGTGTAGCATTATGACAC-C-GGTGATTACTTGATCCGAATATTTTCTTTACAAT 2240
|||||| ||||||||||||||| | ||||||||||||||||| |||||||||||| ||
Sbjct 2149 AGGCATATGTAGCATTATGACATACTGGTGATTACTTGATCCGGATATTTTCTTTATTAT 2208
Query 2241 AAACTGAATTATAGCAG 2257
||||||||||||| |||
Sbjct 2209 AAACTGAATTATATCAG 2225
> Ahg312970 jgi|Araly1|312970|fgenesh1_pm.C_scaffold_1001750
Length=1707
Score = 1328 bits (719), Expect = 0.0
Identities = 1282/1550 (83%), Gaps = 53/1550 (3%)
Strand=Plus/Plus
Query 208 TTTCCATCGGCGGCGCTACCCTTACTACAACcgtctccgtcgtctccttcctctcgttat 267
||| || |||||||||||| |||||||||||||||||||| |||||| ||| | || |
Sbjct 6 TTTTCAGCGGCGGCGCTACAATTACTACAACCGTCTCCGTCTTCTCCTCCCTTTAATT-T 64
Query 268 -cgccgtctctctatctctcctcattctcttcgcttttctct-ctttccttgctccgcct 325
|||||||||| | ||||||| || ||||||||| |||||| | || ||| | || |||
Sbjct 65 GCGCCGTCTCTGGAGCTCTCCTTATCCTCTTCGCTCTTCTCTCCATT-CTTTCCCCTCCT 123
Query 326 cctGGA-GATTCCGATCG-C-CTTCCTCCACGC-G-TTCGCTACT-CATCCAATGATGCG 379
||| || ||||||||||| | | | ||||| || | ||| ||| | | ||||||||| |
Sbjct 124 CCT-GATGATTCCGATCGCCGCAT-CTCCAAGCAGATTCACTA-TGGAGCCAATGATGAG 180
Query 380 -ATCAAAGC-TA-CA--GGTTTCCATA-TT-C-C-GAGAGCTGGAGGCAGATCAGATCGT 430
| ||| | || || ||||| || | || | | ||||| |||||| | || ||||||
Sbjct 181 AAGAAAAACATACCAGTGGTTTTCACAGTTCCGCAGAGAGGTGGAGGGAAATTGGATCGT 240
Query 431 GATATCTGGCGTTCACGAAATGCTGAATTCTTTTTTGGATGCAGCAATGCAAGCAGCAAA 490
||||||||||||||| | ||||||||||||||| ||| || | || |||||||||||
Sbjct 241 GATATCTGGCGTTCATGGAATGCTGAATTCTTTCATGGTTGTTGTAACGCAAGCAGCAAG 300
Query 491 TTCGCAAATTCGAAAGCAGTGACGAGAAATGATCGATACTTGGTAATAGCCACTAGTGGT 550
||| ||||| | |||||| | || ||||||||||||||||||| || ||||||||||||
Sbjct 301 TTCCCAAATGCTAAAGCAATTACTAGAAATGATCGATACTTGGCGATTGCCACTAGTGGT 360
Query 551 GGTTTGAACCAACAACGAACTGGAATTGTAGATGCAGTTGTTGCGGCAAGGATTCTAAAT 610
||||| ||||||||||| ||||||||||||||||| |||||||| ||| |||||||||||
Sbjct 361 GGTTTAAACCAACAACGGACTGGAATTGTAGATGCTGTTGTTGCTGCACGGATTCTAAAT 420
Query 611 GCTACTCTTGTTGTTCCCAAGTTAGACCAGAAGTCTTACTGGAAGGATGCCAGTGACTTC 670
||||| |||||| |||| ||||| |||||||| || |||||||| |||||||||||||||
Sbjct 421 GCTACGCTTGTTATTCCGAAGTTGGACCAGAAATCCTACTGGAAAGATGCCAGTGACTTC 480
Query 671 TCGCATATTTTCGATGTTGATTGGTTTATCTCATTTCTGTCTGGAGACGTCAGAATTATA 730
||| | ||||||||||| ||||||||||| |||||||| || ||| |||| ||| ||
Sbjct 481 TCGAACATTTTCGATGTCGATTGGTTTATATCATTTCTCTCAAAAGATGTCAAAATCATT 540
Query 731 AAGCAACTTCCACTGAAAGGAGGGCGTACATGGAGTACAAGTAGAATGCGTGTACC-ACG 789
|| ||||||||| ||||||||||| |||||||| | | |||||||||||||| | |
Sbjct 541 GAGAAACTTCCACAGAAAGGAGGGCAAACATGGAGCCCTCGCAGAATGCGTGTACCGA-G 599
Query 790 GAAATGTAACGAGAGATGCTATATTAACCGTGTTTTACCTGTTCTTCTCAAAAGGCATGC 849
||||| || |||| ||||||||| || || || ||||||||||||| |||||||||||
Sbjct 600 AAAATGCAATGAGAAATGCTATATCAATCGGGTGTTACCTGTTCTTCAGAAAAGGCATGC 659
Query 850 AGTTCAACTGAACAAATTTGACTATAGACTTTCAAACAAGTTGAGTGATGACT-TGCAAA 908
|||| || |||| | |||||| || ||||| |||||||||||||| ||||| | |||| |
Sbjct 660 AGTTGAATTGAATAGATTTGATTACAGACTCTCAAACAAGTTGAGAGATGA-TCTGCAGA 718
Query 909 AGCTAAGATGTAGAGTAAATTACCATGCTCTAAAGTTCACTGATCCTATACTT-ACAATG 967
|||| || |||||||||||||| ||||| || |||||||||||||| || ||| | ||||
Sbjct 719 AGCTGAGGTGTAGAGTAAATTATCATGCGCTTAAGTTCACTGATCCAATTCTTGA-AATG 777
Query 968 GGTAATGAATTGGTCCGGCGCATG-AGATTGAGGAGCAAACACTTCATTGCTTTACATTT 1026
||||| ||||||||||| | ||| || | |||||| |||||||||||||||||| |
Sbjct 778 GGTAACGAATTGGTCCGAAGAATGCGGA-AAAAGAGCAAGCACTTCATTGCTTTACATCT 836
Query 1027 AAGGTATGAACCTGATATGCTTGCATTCTCGGGATGCTATTATGGTGGTGGTGATAAGGA 1086
||||| ||||||||||||||| || ||||||||||| || |||||||||||||| |||||
Sbjct 837 AAGGTTTGAACCTGATATGCTCGCCTTCTCGGGATGTTACTATGGTGGTGGTGAGAAGGA 896
Query 1087 -AAGGAGAGAACTT-GCAGCAATTAGAAGGAGATGGAAAACATTACATATTAACAACCCA 1144
|| || || | || | | |||| ||||||||||||||||| |||||| | || |||||
Sbjct 897 GAA-GAAAG-AGTTAGGAACAATCAGAAGGAGATGGAAAACTTTACATGTAAATAACCCC 954
Query 1145 GAGAAA-CAGAGGCGACAAGGAAGATGTCCACTCACTCCAGAAGAAGTCGGACTGATGCT 1203
|| ||| || |||||||||||||||||||| || || ||||||||||| ||| | |||||
Sbjct 955 GA-AAAGCAAAGGCGACAAGGAAGATGTCCGCTAACACCAGAAGAAGTTGGATTAATGCT 1013
Query 1204 TAGAGCTTTGGGATATGGCAGTGATGTTCATATATATGTCGCGTCTGGTGAAGTATATGG 1263
|||||||||||||||||| |||||||||||||||||||| || || ||||||||||||||
Sbjct 1014 TAGAGCTTTGGGATATGGAAGTGATGTTCATATATATGTTGCATCAGGTGAAGTATATGG 1073
Query 1264 AGGAGAAGAATCATTGGCTCCTTTGAAAGCACTCTTT-CCACACTTCTATTCAAAAGACA 1322
||||||| ||||||||||||||||||||||||| ||| ||||| ||||||||||||||||
Sbjct 1074 AGGAGAAAAATCATTGGCTCCTTTGAAAGCACT-TTTCCCACATTTCTATTCAAAAGACA 1132
Query 1323 CTATAGCTACAAAGGAA--GAGTTAGAACCTTTTTCTTCGTACTCTTCTA-GAATGGCTG 1379
| ||||||||||| || |||||| || | |||||||| || ||||| | |||||||||
Sbjct 1133 CCATAGCTACAAA--AATGGAGTTAAAAGCATTTTCTTCTTATTCTTC-ACGAATGGCTG 1189
Query 1380 CACTCGACTTCCTTGTTTGTGATGAAAGCGACGTATTT-GTAACCAACAACAATGGCAAT 1438
|||| || |||||||| |||||||||||||| || ||| || |||||||| || || ||
Sbjct 1190 CACTTGATTTCCTTGTGTGTGATGAAAGCGATGT-TTTCGTTACCAACAATAACGGAAAC 1248
Query 1439 ATGGCAAAAATATTGGCTGGGAGGAGGAGATACTTAGGACATAAACCCACTGTTAGGCCG 1498
||||| | |||||| || || | |||||||| || ||||||||||| || |||||||
Sbjct 1249 ATGGCGAGAATATTAGCCGGTCGAAGGAGATATTTTGGACATAAACCGACAATTAGGCCA 1308
Query 1499 AATGCAAAAAAGCTTTAC-AGATTATTCATGAACAAAGAGAACACGACATGGGAGGAGTT 1557
||||| |||||||| ||| || || || |||| ||||||||| || || |||||||||||
Sbjct 1309 AATGCGAAAAAGCTATACAAG-TTGTTTATGAGCAAAGAGAATACTACTTGGGAGGAGTT 1367
Query 1558 TTCATCTAA-AGTCCGTTCGTTTCAGAGAGGGTTCATGGGAGAGCCAAAGGAAGTAAGAG 1616
| | || || |||| | | ||||||||||| ||||||||||||||||||||||||||||
Sbjct 1368 TGCTTC-AAGAGTCAGAACATTTCAGAGAGGATTCATGGGAGAGCCAAAGGAAGTAAGAG 1426
Query 1617 CTGGTAGAGGTGAATTTCACGAAAACCCATCCACGTGCATATGCGAAGATACAGAGGCTA 1676
| || |||||||| ||||| || || ||| | | || |||||||||||||| || ||||
Sbjct 1427 CCGGAAGAGGTGAGTTTCATGAGAATCCAGCGGCTTGTATATGCGAAGATACCGATGCTA 1486
Query 1677 AGGCAAAGGC-GCAATTA-GAAT-CTAGAAAACTTGGAAAGAAAAACAAA 1723
|||||||||| | || | | || | ||||||||||| ||||||||||||
Sbjct 1487 AGGCAAAGGCAGGAAAGATGGATTCGAGAAAACTTGGGAAGAAAAACAAA 1536
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 85398329290
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5