BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G77500.1
Length=3158
Score E
Sequences producing significant alignments: (Bits) Value
Ahg476915 jgi|Araly1|476915|fgenesh2_kg.2__2045__AT1G77500.1 4146 0.0
Ahg945478 jgi|Araly1|945478|scaffold_701707.1 220 4e-56
Ahg922471 jgi|Araly1|922471|scaffold_103752.1 215 2e-54
Ahg950981 jgi|Araly1|950981|scaffold_802868.1 185 1e-45
Ahg472413 jgi|Araly1|472413|fgenesh2_kg.1__2367__AT1G21740.1 82.4 2e-14
> Ahg476915 jgi|Araly1|476915|fgenesh2_kg.2__2045__AT1G77500.1
Length=3016
Score = 4146 bits (2245), Expect = 0.0
Identities = 2750/2981 (92%), Gaps = 86/2981 (3%)
Strand=Plus/Plus
Query 148 ACTTTGCTCTGTTTCTTC---AACaaaaaaa-GTGAACTTTGCTCTGTTCCGTCCATGTC 203
|||||||||||||||||| || ||||||| || |||||||||||||||| ||||||||
Sbjct 74 ACTTTGCTCTGTTTCTTCAAAAAAAAAAAAAGGTAAACTTTGCTCTGTTCCTTCCATGTC 133
Query 204 CGATGATGATCGGAGTGGAAGCAGAATGAGATTTGAAGCAAACGTCTAGAGTT-C--C-- 258
||||||||||||||||||||| ||||||||||||||| ||||||||||||||| | |
Sbjct 134 CGATGATGATCGGAGTGGAAGAAGAATGAGATTTGAAACAAACGTCTAGAGTTCCGACGA 193
Query 259 -GACGTTATGGGTTGCGGAGGATCAAAAGTAGATAATCAACCAATAGTGATTCTCTGTAG 317
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 194 AGACGTTATGGGTTGCGGAGGATCAAAAGTAGATAATCAACCAATTGTGATTCTCTGTAG 253
Query 318 AGAACGAAAGGAGCTGCTTAAAGCGGCGTCGTATCATCGTTCTGCTCTCGCTGTCGCTCA 377
|||||| ||||| ||| ||||||||||||||||| |||| ||||||||||| ||||||||
Sbjct 254 AGAACGGAAGGAACTGATTAAAGCGGCGTCGTATAATCGCTCTGCTCTCGCCGTCGCTCA 313
Query 378 CCTAACTTACTTCCAGTCTCTCTCCGACGTCGGTGAAGCTATTCAACGTTTCGTTGACGA 437
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 314 CCTAACTTACTTCCAGTCTCTCTCCGACGTCGGCGAAGCTATTCAACGTTTCGTTGACGA 373
Query 438 CGAAGTCGTAGCTGGTTTTTCTTCTTCTTCTTCGCCGGATTCTCCAGTTCTTACACTTCC 497
||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct 374 AGAAGTCGCAGCTGGTTTTTCGTCGTCTTCTTCGCCGGATTCTCCAGTTCTTACACTTCC 433
Query 498 GTCCGACGAAGGGAAA-CCGACGAAACACAAGAGGATTTCTCCTTCTTCAACCACCTCAA 556
|||||||||| ||||| |||| ||||||||||||||| |||||||||||||||||||| |
Sbjct 434 GTCCGACGAA-GGAAAGCCGAAGAAACACAAGAGGATCTCTCCTTCTTCAACCACCTCGA 492
Query 557 TTTCTCATTCCGTCATCGAAGAAGAAGACACTGATGATGATTCGCATTTGCATCTAAGCT 616
|||||||||||||||||||||||||||| || ||||||||| |||||||||||||| |
Sbjct 493 TTTCTCATTCCGTCATCGAAGAAGAAGATAC---TGATGATTCTCATTTGCATCTAAGTT 549
Query 617 CC-G----G-ATCCGAATCCGAATCAGAAGTTGGATCTAAGGATCATATCCAAA-T--TA 667
|| | | ||||||| |||||||||||| |||||||||| |||||||||||| | ||
Sbjct 550 CCGGATCTGAATCCGAACCCGAATCAGAAGCTGGATCTAAGAATCATATCCAAATTACTA 609
Query 668 CTAGCACTCCAGAACAAGAGCGGTCAACGGAATCATTTCCTTCCGGTTATCATCCAACAA 727
|||||| |||||||| ||| |||||||||||| ||||||| ||||| | | |||||||||
Sbjct 610 CTAGCAGTCCAGAACCAGAACGGTCAACGGAAACATTTCCGTCCGG-T-T-ATCCAACAA 666
Query 728 ACTATGCTCCACCGGTTTACCCA-CCTGGTTATCCACCCGGTTACCCATTCAGTTACCCG 786
|||||||||||||| |||||||| || |||||||||| | |||||| | |||| |
Sbjct 667 ACTATGCTCCACCGATTTACCCAGCC-GGTTATCCACTCACTTACCCGCCCGGTTATTC- 724
Query 787 AC-CGGTTATTCATCGGGTAATTATCAACCGGGTTACCCGAATTACACAGGTGAGAATCC 845
|| |||||| | ||||| ||||| ||||||||||||||||| || |||||||||||
Sbjct 725 ACAGGGTTATCCGTCGGG---TTATCCACCGGGTTACCCGAATTTCAGTGGTGAGAATCC 781
Query 846 ATACGGAAATCGAGGAATGTATTACATGAAGAAATCTGCGCCACAATCACGACCGTTCAT 905
||||| ||||||||| ||||||| |||||||||||| |||||||||||||||||||||||
Sbjct 782 ATACGCAAATCGAGGCATGTATTTCATGAAGAAATCAGCGCCACAATCACGACCGTTCAT 841
Query 906 TTTCCAACCGGAGAATCATCGAGTGGAGGAGAACGCGCAATGGCCGTCGGATTCTGGATT 965
||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||
Sbjct 842 CTTCCAACCGGAGAATCATCGAGT---GGAGAACGCGCAATGGTCGTCGGATTCTGGATT 898
Query 966 TAGAAACACAGGAGTGCAACGGAGATCGCCGTCTCCGTTACCTCCTCCGTCACCACCTAC 1025
| |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct 899 TGGAAACACAGGAGTGCAACGGAGATCGCCTTCTCCGTTACCTCCTCCGTCACCGCCTAC 958
Query 1026 GGTTTCAACTTGGGATTTTTTGAATGTGTTTGATACTTATGATTACAGCAACGCCCGTTC 1085
|||||||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||
Sbjct 959 GGTTTCAACTTGGGATTTCTTGAATGTTTTTGATACCTATGATTATAGCAACGCCCGTTC 1018
Query 1086 TCGTGCTTCGGGATATTATCCGATGGGAATGGCGTCAATCTCAAGCAGTCCTGATTCGAA 1145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1019 TCGTGCTTCGGGATATTATCCGATGGGAATGGCGTCAATCTCAAGCAGTCCTGATTCCAA 1078
Query 1146 GGAAGTTAGAGAAAGAGAAGGGATTCCTGAGCTAGAAGAAGTAACAGAGCAAGAAGTTAT 1205
||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct 1079 GGAAGTTAGAGAAAGAGAAGGGATTCCTGAGCTGGAAGAAGTAACAGAGC---AAG---- 1131
Query 1206 CAAGCAAGTGTATAGACGTCCCAAGAGACCAGGATTGGAGAAGGTTAAAGAACACAGAGA 1265
|||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||
Sbjct 1132 --AGCAAGTGTATAGACGTCCCAAGAGAACAGGATTGGAGAAGGTTAAGGAACACAGAGA 1189
Query 1266 CGAGCACAAGCACAACGTTTTTCCTGAGAGGAACATTAAC----------AAA-----AG 1310
|||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct 1190 CGAGCACAAGCACAACGTTTTTCCTGAGAGGAACATTAACAAAAGAGAAGAAACTTTGAG 1249
Query 1311 GGAAGTTCCAATGCCAGAACAAGTCACTGAGAGCTCATTGGATTCAGAGACAATTTCGTC 1370
|||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1250 GGAAGTGCCAATGCCAGAACAAGTCACTGAGAGCTCCTTGGATTCAGAGACAATTTCGTC 1309
Query 1371 TTTTTCAGGAAGTGATGTAGAATCGGAGTTTCACTATGTTAATGGTGGTGAAGGAAAGAG 1430
||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||
Sbjct 1310 GTTTTCAGGAAGTGATGTGGAATCGGAGTTTCACTATGTTAATGGTGGTGAAGG-AA-AG 1367
Query 1431 TAGCAGCATCAGTTCAATCAGTCATGGGGCTGGGACAAAGAGCTCGAGAGAAGTAGAAGA 1490
|||||||| |||||||||||||| ||| | |||||||||||||||||||||||||||||
Sbjct 1368 -AGCAGCATTAGTTCAATCAGTCACGGGACGGGGACAAAGAGCTCGAGAGAAGTAGAAGA 1426
Query 1491 ACAGTATGGGAGGAAAAAAGGAGTGAGCTTTGAGTTGGAGGAAACAACGAGCACTTCGTC 1550
||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1427 ACAGTATGGGAGGAAGAAAGGAGTGAGCTTTGAGTTGGAGGAGACAACGAGCACTTCGTC 1486
Query 1551 TTTTGATGTTGAATCTTCCAAGATAAGTAGCTTATCCAGTTTGTCGATTCATGCCACTAG 1610
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1487 TTTTGATGTTGAATCTTCCAAGATAAGTAGCTTATCCAGTTTGTCGATCCATGCCACTAG 1546
Query 1611 GGATCTCAGAGAAGTTGTTAAGGAGATCAAGAGTGAGTTCGAGATTGCTTCTTCTTGTGG 1670
|||||||||||||||||| |||||||| ||||||||||||||| |||||||||| |||||
Sbjct 1547 GGATCTCAGAGAAGTTGTCAAGGAGATAAAGAGTGAGTTCGAGGTTGCTTCTTCCTGTGG 1606
Query 1671 GAAGGAGGTTGCTTTGTTACTTGAAGTCGGCAAGTTGCCTTATCAGCATAAAAACAATGG 1730
||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct 1607 TAAGGAGGTTGCTTTGTTACTTGAGGTTGGCAAGTTGCCTTATCAGCATAAAAACAATGG 1666
Query 1731 CGTTAAAGTTATCTTATCCAGGATCATGTATCTGGTAGCACCATCCACACGGTCATCGCA 1790
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1667 GGTTAAAGTTATCTTATCCAGGATCATGTATCTGGTAGCACCATCCACACGGTCATCGCA 1726
Query 1791 CTCTCAGCCCAGACTATCAATACGTTTAACATCTAGAACTCGAAAAATGGCGAAATCATA 1850
|||||||||||||||||||||||||||||||||||| || || |||||||||||| ||||
Sbjct 1727 CTCTCAGCCCAGACTATCAATACGTTTAACATCTAGGACACGGAAAATGGCGAAAGCATA 1786
Query 1851 CAATGGACAAGATGTTAATGGAGGCTTCAATGGAAACCTCTCATCAACCTTAGAGAAACT 1910
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1787 CAATGGACAAGATGTTAATGGAGGCTTCAATGGAAACCTCTCATCAACCTTGGAGAAACT 1846
Query 1911 GTATGCGTGGGAAAAGAAACTGTACAAGGAAGTCAAGGACGAAGAAAAGCTTCGTGCTAT 1970
|||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||| ||
Sbjct 1847 GTATGCATGGGAAAAGAAACTGTACAAAGAAGTCAAGGACGAAGAAAAGCTGCGTGCCAT 1906
Query 1971 CTATGAAGAGAAGTGCAGGAGACTaaaaaaaaTGGATAGTCATGGAGCAGAATCTATCAA 2030
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1907 CTATGAAGAGAAGTGCAGGAGACTAAAAAAAATGGATAGTCATGGAGCAGAATCTATCAA 1966
Query 2031 GATCGATGCTACTCGGGCAGCCATTAGGAAGCTTCTGACCAAAATCGATGTTTGTATAAG 2090
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1967 GATCGATGCTACTCGGGCAGCCATTAGGAAGCTTCTGACCAAAATCGATGTCTGTATAAG 2026
Query 2091 ATCAGTTGATTCGATTTCCAGCAGAATCCATAAACTTAGAGATGAAGAGTTGCAGCCACA 2150
||| |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2027 ATCTGTTGATTCTATTTCCAGCAGAATCCATAAACTTAGAGATGAAGAATTGCAGCCACA 2086
Query 2151 GTTGATACAGTTAATTCACGGGTTGATAAGAATGTGGAGGTCAATGCTGAGGTGCCACCA 2210
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2087 ACTGACACAGTTAATTCACGGGTTGATAAGAATGTGGAGGTCAATGCTGAGGTGCCACCA 2146
Query 2211 GAAACAGTTTCAGGCGATCAGGGAGAGCAAGGTTCGATCTCTAAAGGCGAACACAACCTT 2270
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2147 GAAACAGTTTCAGGCGATCATGGAGAGCAAGGTTCGATCTCTAAAGGCGAACACAACCTT 2206
Query 2271 ACAAAATGACTCTGGCTCTACAGCAATTCTTGATCTTGAGATAGAGCTTAGAGAATGGTG 2330
|||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2207 ACAAAAAGACTCTGGCTCGACAGCAATTCTTGATCTTGAGATAGAGCTTAGAGAATGGTG 2266
Query 2331 CATCAGCTTCAACAACTGGGTCAACACCCAGAAATCATACGTCCAGTTCCTAAGCGGATG 2390
|| |||||||||| |||||||||||| |||||||||||| ||||||||||||||||| ||
Sbjct 2267 CAGCAGCTTCAACGACTGGGTCAACAGCCAGAAATCATATGTCCAGTTCCTAAGCGGCTG 2326
Query 2391 GCTCACGAAATGCCTTCACTATGAACCCGAGGCAACCGATGACGGAATCGCTCCTTTCTC 2450
|||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct 2327 GCTCTCGAAATGCCTTCACTATGAACCAGAGGCAACCGATGACGGAATAGCTCCTTTCTC 2386
Query 2451 TCCTAGCCAGATCGGTGCACCGCCCATCTTTATCATTTGCAAAGATTGGCAAGAAGCAAT 2510
||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct 2387 TCCTAGCCAGATCGGTGCACCGCCCATATTTATCATATGCAAAGATTGGCAAGAAGCAAT 2446
Query 2511 GTGTAGAATATCTGGAGAGAATGTGACCAATGCAATGCAAGGTTTTGCTTCAAGCCTACA 2570
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2447 GTGTAGAATATCTGGAGAGAATGTGACCAATGCAATGCAAGGTTTTGCTTCAAGTCTACA 2506
Query 2571 CGAGCTATGGGAGAAGCAAGAAGAAGAGCAAAGGGTAAAAGCGCAATCTGAGCAGCGAGA 2630
|||| |||||||||| ||||||||||||||||| |||| |||||||| ||||||||||||
Sbjct 2507 CGAGATATGGGAGAAACAAGAAGAAGAGCAAAGAGTAAGAGCGCAATTTGAGCAGCGAGA 2566
Query 2631 TGCAGAGTCAGAGAGAAGTGTGGTTTCGAAAGGTCGGTCAGAGAGCGGGATATCAGCTTT 2690
||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||
Sbjct 2567 TGCAGAGTCAGAGAGAAGTTTGGTTTCGAAAGGTCGGTCAGAGAGCGGGATATCGGCTTT 2626
Query 2691 GGATGATTTGAAAGTGGATTTAGATTCAATGAGGAAGAGGCTAGTCGAGGAGAGAGGTAA 2750
|||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||
Sbjct 2627 GGATGATTTGAAAGTGGATTTAGATTCAATGAGGAAGAAGCTAGTAGAGGAAAGAGGTAA 2686
Query 2751 GGGTAAAGAAACCATTAAGCTTGTGAACAACGCGTCTTCGAGCAGCTTAAAAGCTGGTTT 2810
| ||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||
Sbjct 2687 GCGTAAAGAAACCATTAAGCTTGTGAACAACACGTCTTCGAGTAGCTTGAAAGCTGGTTT 2746
Query 2811 AGTTCCCATTTTCGGGGCACTGAGAAAATTCACATCAGAAGTTGTGAAAGCTCATGAAAT 2870
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 2747 AGTTCCCATTTTCGGGGCACTGAGAAAATTCACAGCAGAAGTTGTGAAAGCTCATGAAAT 2806
Query 2871 TGTTAGGCTTCAACATCCTCAGACCTCTTC---TTGAGTAGAGAGTGTGGA----C---T 2920
|||||||||||||||||||||||| ||||| ||||| ||||| |||||| | |
Sbjct 2807 TGTTAGGCTTCAACATCCTCAGACTTCTTCGGCTTGAGCAGAGATTGTGGAGTTACCACT 2866
Query 2921 TACCACATTTTTGCACCGTTTTGAAGTTTTGTTACTTGCAAATTAGACATAGGTCT-ATA 2979
||||||||||||||||||||||||||||| ||||| | | | ||||| | |||
Sbjct 2867 TACCACATTTTTGCACCGTTTTGAAGTTTCGTTAC----A--T-A----TAGGTTTTATA 2915
Query 2980 TAGAAGGAAATTGTTGTATAGATGAGTTCATATTCAATTATTGGTTGGTTAGTTTCCCTT 3039
|||||| |||||| |||||||| |||||||||||| |||||||||| ||||||| | ||
Sbjct 2916 TAGAAGAAAATTGGTGTATAGACAAGTTCATATTCATTTATTGGTTGATTAGTTTGCTTT 2975
Query 3040 GTAAACCGTTTTTAAATGGTGAAGAAGAAGATATCTAGTTT 3080
||| |||||||||||||||||||||||| |||||||||||
Sbjct 2976 GTAGGCCGTTTTTAAATGGTGAAGAAGAAAATATCTAGTTT 3016
Score = 56.5 bits (30), Expect = 1e-06
Identities = 33/34 (97%), Gaps = 1/34 (3%)
Strand=Plus/Plus
Query 4 TGTTTTCACGTTTTCATATAAATCAGCAAC-CAT 36
|||||||||||||||||||||||||||||| |||
Sbjct 1 TGTTTTCACGTTTTCATATAAATCAGCAACTCAT 34
> Ahg945478 jgi|Araly1|945478|scaffold_701707.1
Length=307
Score = 220 bits (119), Expect = 4e-56
Identities = 136/144 (94%), Gaps = 2/144 (1%)
Strand=Plus/Plus
Query 1729 GGCGTTAA-AGTTATCTTATCCAGGATCATGTATCTGGTAGCACCATCCACACGGTCATC 1787
||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 135 GGCGTCAATA-TTATCTTATCCAGGATCATGTATCTGGTAGCACCATCCACACGGTCATC 193
Query 1788 GCACTCTCAGCCCAGACTATCAATACGTTTAACATCTAGAACTCGAAAAATGGCGAAATC 1847
|||||||| |||||||||||||||||||||||||||||| || || |||||||||||| |
Sbjct 194 GCACTCTCGGCCCAGACTATCAATACGTTTAACATCTAGGACACGGAAAATGGCGAAAGC 253
Query 1848 ATACAATGGACAAGATGTTAATGG 1871
||||||||||||||||||||||||
Sbjct 254 ATACAATGGACAAGATGTTAATGG 277
> Ahg922471 jgi|Araly1|922471|scaffold_103752.1
Length=307
Score = 215 bits (116), Expect = 2e-54
Identities = 135/144 (94%), Gaps = 2/144 (1%)
Strand=Plus/Plus
Query 1729 GGCGTTAA-AGTTATCTTATCCAGGATCATGTATCTGGTAGCACCATCCACACGGTCATC 1787
||||| || | ||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 135 GGCGTCAATA-TTATCTTATCCAGGATCATGTATCTGGTAGCACCATCTACACGGTCATC 193
Query 1788 GCACTCTCAGCCCAGACTATCAATACGTTTAACATCTAGAACTCGAAAAATGGCGAAATC 1847
|||||||| |||||||||||||||||||||||||||||| || || |||||||||||| |
Sbjct 194 GCACTCTCGGCCCAGACTATCAATACGTTTAACATCTAGGACACGGAAAATGGCGAAAGC 253
Query 1848 ATACAATGGACAAGATGTTAATGG 1871
||||||||||||||||||||||||
Sbjct 254 ATACAATGGACAAGATGTTAATGG 277
> Ahg950981 jgi|Araly1|950981|scaffold_802868.1
Length=280
Score = 185 bits (100), Expect = 1e-45
Identities = 114/121 (94%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 1751 GGATCATGTATCTGGTAGCACCATCCACACGGTCATCGCACTCTCAGCCCAGACTATCAA 1810
||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct 130 GGATCATGTATCTAGTAGCACCATCTACACGGTCATCGCACTCTCGGCCCAGACTATCAA 189
Query 1811 TACGTTTAACATCTAGAACTCGAAAAATGGCGAAATCATACAATGGACAAGATGTTAATG 1870
|||||||||||||||| || || |||||||||||| ||||||||||||||||||||||||
Sbjct 190 TACGTTTAACATCTAGGACACGGAAAATGGCGAAAGCATACAATGGACAAGATGTTAATG 249
Query 1871 G 1871
|
Sbjct 250 G 250
> Ahg472413 jgi|Araly1|472413|fgenesh2_kg.1__2367__AT1G21740.1
Length=2829
Score = 82.4 bits (44), Expect = 2e-14
Identities = 56/62 (90%), Gaps = 0/62 (0%)
Strand=Plus/Plus
Query 1009 CCTCCGTCACCACCTACGGTTTCAACTTGGGATTTTTTGAATGTGTTTGATACTTATGAT 1068
|||||||| || |||| | | |||| ||||||||||||||||||||||||||||||||||
Sbjct 814 CCTCCGTCTCCGCCTAAGATCTCAAGTTGGGATTTTTTGAATGTGTTTGATACTTATGAT 873
Query 1069 TA 1070
||
Sbjct 874 TA 875
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 119298647340
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5