BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G78882.1
Length=2246
Score E
Sequences producing significant alignments: (Bits) Value
Ahg477051 jgi|Araly1|477051|fgenesh2_kg.2__2181__AT1G78880.1 3563 0.0
Ahg920592 jgi|Araly1|920592|scaffold_101873.1 1533 0.0
> Ahg477051 jgi|Araly1|477051|fgenesh2_kg.2__2181__AT1G78880.1
Length=2243
Score = 3563 bits (1929), Expect = 0.0
Identities = 2156/2261 (95%), Gaps = 33/2261 (1%)
Strand=Plus/Plus
Query 1 GTGTTCTTCACTTTTTCTTTCCTCAGTTGG-TTGTCCAAACaaaaaaaaTCTCCACCGCT 59
|||||||||||||||||||||||||||||| |||||| || |||||||||||||||||||
Sbjct 1 GTGTTCTTCACTTTTTCTTTCCTCAGTTGGTTTGTCC-AA-AAAAAAAATCTCCACCGCT 58
Query 60 CTGAGAG-AAAAAAGTTGGAagaggagagagagagagagCGACAACGCACCAACTGTTGC 118
||||||| ||||||| ||| || |||| ||||||||| |||||||||||||||||| |
Sbjct 59 CTGAGAGAAAAAAAG-TGG--GA--AGAG-GAGAGAGAGAGACAACGCACCAACTGTTAC 112
Query 119 GGCTCAAAGAGATCTCGATCGGGATCCACAAGACGgagatagatagagagagagtgagag 178
|||||||||||||||||||||||||||||| |||||||||||| | |||||| | |||||
Sbjct 113 GGCTCAAAGAGATCTCGATCGGGATCCACACGACGGAGATAGAGATAGAGAGTGAGAGAG 172
Query 179 CTAACGGAAATGGGATCTCAGCTACTTGAGTGTTGCTTCCGTTTCGTCTTCTACTGTCAC 238
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 173 CTAACGGATATGGGATCTCAGCTACTTGAGTGTTGCTTCCGTTTCGTCTTCTACTGTCAC 232
Query 239 TCCCACAGCTCCAACTGTTTTCCTTGAT--TGTTTTTCTTTTATCTC-GGCGTTTTACTC 295
|||||||||||||||||||||||||||| | |||||||||| |||| | | ||| |||
Sbjct 233 TCCCACAGCTCCAACTGTTTTCCTTGATACTCTTTTTCTTTTCTCTCTGTCCATTT-CTC 291
Query 296 --GGAAGCTTACAACACACTCTCTCAGGGATTTGAAATCCTCACGTTTCAGCACATTCTT 353
||| ||| ||||||||||||||||||||||||||| |||||||||||||||
Sbjct 292 ATGGATTCTT--GTTTTACTCTCTCAGGGATTTGAAATCCTCACTTTTCAGCACATTCTT 349
Query 354 TGTGGTTCCCATCTATTCTCTAGCCAG-TTCGGAGTTGCCTGAAGAAATCAAATGGGTTC 412
|||||| |||||||||||||||||||| ||| ||||| ||||||||||||||||||||||
Sbjct 350 TGTGGTGCCCATCTATTCTCTAGCCAGTTTC-GAGTTTCCTGAAGAAATCAAATGGGTTC 408
Query 413 GAGATACGCATCTCACCAGCTCAGCAATGGGCTTTTTGTGTCTGGCCGGCCAGAGCAACC 472
||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 409 AAGATACGCATCCCACCAGCTCAGCAATGGGCTTTTTGTGTCTGGCCGCCCAGAGCAACC 468
Query 473 CAAAGAAAAGCCTCCAACAATGAGCTCAGTAGCCATGCCATACACCGGTGGTGATATCAA 532
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct 469 CAAAGAAAAGCCTCCAACAATGAGCTCGGTAGCCATGCCATACACCGGTGGTGATATTAA 528
Query 533 GAAATCAGGAGAATTGGGGAAGATGTTTGACATTCCGACTGATGGGACTAAGTCAAGGAA 592
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 529 GAAATCAGGAGAATTAGGGAAGATGTTTGACATTCCGACTGATGGGACTAAGTCAAGGAA 588
Query 593 GTCTGGCCCCATAACCGGAGGATCGTCAAGAAGTGGTGCGCAATCAGGTCCAGTGCCTAA 652
||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||
Sbjct 589 GTCTGGCCCCATAACTGGAGGATCTTCAAGAAGTGGTACGCAATCAGGTCCAGTGCCTAA 648
Query 653 TGCAACTGGTCGTATGTCTGGCAATTTAGCTTCTGCTGGTTCAAATTCAATGAAGAAAAC 712
||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct 649 TGCAACTGGTCGTATGTCTGGTTCTTTAGCTTCTGCTGGCTCAAATTCAATGAAGAAAAC 708
Query 713 AAATTCTGGGCCTTTGTCTAAGCATGGGGAGCCTTTAAAGAAATCCTCTGGTCCGCAATC 772
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 709 AAATTCTGGGCCTTTGTCTAAGCACGGGGAGCCTTTAAAGAAATCCTCTGGTCCGCAATC 768
Query 773 CGGTGGTGTAACAAGGCAAAATTCCGGCCCTATTCCTATACTCCCAACTACAGGTCTCAT 832
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 769 CGGTGGTGTAACAAGGCAAAATTCCGGCCCTATTCCTATACTCCCAACTACAGGTCTCAT 828
Query 833 AACATCTGGGCCAATTACCTCGGGGCCTCTAAATTCATCTGGGGCTCCTAGGAAAATTTC 892
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 829 AACATCTGGGCCAATTACCTCGGGCCCTCTAAATTCATCTGGGGCTCCTAGGAAAATTTC 888
Query 893 TGGTCCTCTAGACTATTCTGGTTCGATGAAGACACATATGCCTTCAGTTGTCCACAACCA 952
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TGGTCCTCTAGACTATTCTGGTTCGATGAAGACACATATGCCTTCAGTTGTCCACAACCA 948
Query 953 GGCGGTAACTACCCTTGCTCCGGAAGATGACTTTTCCTGCATGAAAAGCTTCCCCAAGCC 1012
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 949 GGCGGTAACTACCCTTGCTCCGGAAGATGACTTTTCCTGCATGAAGAGCTTCCCCAAGCC 1008
Query 1013 TGTGCTGTGGCTGGTTATACTTATATTTGTGATGGGGTTCCTCGCTGGAGGCTTCATTCT 1072
|||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct 1009 TGTGCTGTGGCTGGTTATACTTATATTTGTAATGGGGTTCCTCGCTGGAGGGTTCATTCT 1068
Query 1073 TGGAGCAGTTCACAATGCAATTCTCCTCATAGTTGTGGCGGTCTTGTTCACAGTTGTTGC 1132
|||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||
Sbjct 1069 TGGAGCAGTTCACAATGCAATTCTCCTCATTGTTGTTGCGATCTTGTTCACAGTTGTTGC 1128
Query 1133 TGCACTTTTCATTTGGAATATTTCTTGTGAAAGACGTGGTATCACAGATTTCATCGCTCG 1192
||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct 1129 TGCACTTTTCATTTGGAATATTTCTTGTGAAAGGCGTGGTATCACAGATTTCATTGCTCG 1188
Query 1193 TTATCCGGATGCTGATCTTAGAACTGCCAAAAACGGTCAATATGTGAAGGTCACTGGGGT 1252
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1189 TTATCCTGATGCTGATCTTAGAACTGCCAAAAACGGTCAATATGTGAAGGTCACTGGGGT 1248
Query 1253 GGTCACCTGTGGTAACGTGCCTCTTGAATCATCCTTCCATAGAGTTCCTAGGTGTGTTTA 1312
|||||| ||||||||||||||||| ||||||||||||||||||||||| || ||||||||
Sbjct 1249 GGTCACTTGTGGTAACGTGCCTCTGGAATCATCCTTCCATAGAGTTCCCAGATGTGTTTA 1308
Query 1313 CACGTCTACTTGTCTATATGAGTACCGTGGATGGGGTTCAAAGCCAGCCAATGCTTCACA 1372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1309 CACGTCTACTTGTCTATATGAGTACCGTGGATGGGGTTCAAAGCCAGCCAATGCTTCACA 1368
Query 1373 TCGTCGCTTTACATGGGGACTGAGATCAGCAGAGAGGCATGTGGTAGACTTCTACATTTC 1432
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1369 TCGTCGCTTCACATGGGGACTGAGATCAGCAGAGAGGCATGTGGTAGACTTCTACATTTC 1428
Query 1433 TGATTTCCAATCTGGGCTCAGGGCATTGGTCAAAACTGGAAACGGTGCAAAGGTAACACC 1492
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1429 TGATTTCCAATCTGGGCTCAGAGCATTGGTCAAAACTGGAAACGGTGCAAAGGTAACACC 1488
Query 1493 GCTTGTCGATGATTCTGTTGTCATCGATTTTAAGCCAGGAAATGAGCAAGCCTCTCCAGA 1552
|| |||||||||||||||||||||||||||| |||||| | ||||||||||||||||||
Sbjct 1489 TCTCGTCGATGATTCTGTTGTCATCGATTTTAGGCCAGGGAGTGAGCAAGCCTCTCCAGA 1548
Query 1553 CTTTGTAAGGTGGTTGGGTAAAAAGAATCTAACCAATGATGATCGAATAATGCGGCTTAA 1612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1549 CTTTGTAAGGTGGTTGGGTAAAAAGAATCTAACCAATGATGATCGAATAATGCGGCTTAA 1608
Query 1613 AGAAGGGTATATCAAAGAAGGAAGCACAGTAAGTGTGATTGGAGTGGTTCAGAGAAACGA 1672
|||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct 1609 AGAAGGGTATATCAAAGAAGGAAGTACAGTGAGTGTGATTGGAGTGGTTCAGAGAAACGA 1668
Query 1673 TAACGTGTTAATGATAGTCCCGACGACAGAACCATTAGCAGCTGGTTGGCAATGGAGTAA 1732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1669 TAACGTGTTAATGATAGTCCCGACGACAGAACCATTAGCAGCTGGTTGGCAATGGAGTAA 1728
Query 1733 GTGCACATTCCCTGCAAGTCTTGAAGGAATTGTATTGAGATGCGAAGATTCATCGAACGT 1792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1729 GTGCACATTCCCTGCAAGTCTTGAAGGAATTGTATTGAGATGCGAAGATTCATCGAACGT 1788
Query 1793 AGATGCAATTCCTGTCTGATGCAGTAGTAGTGGAAGTCTTTCTTTTCCTTCTTCTTCCAC 1852
||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 1789 AGACGCAATTCCTGTCTGATGCAGTAGTAGT--AAGTCTTTCTTTTGCTTCTTCTTCCAC 1846
Query 1853 GGTTGGTAGACGAAAATTTCACTGCTCCACTTCGGCTTCATTAATATTTTTCATGAAATC 1912
||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct 1847 GGTTGGTAGACGAAAATCTCACTGTTCCACTTCGGCTTCATTAATATTTTTCATGAAATC 1906
Query 1913 TGAAATGTGTTCTTGGTTGGTGGCCTTTTCGCTCTCTACTGATGATGATTCCTTTGGTTG 1972
|||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct 1907 TGAAATGTGTTCTTGGTTGGTGGC-TTTTCGCTCTCTCCTGATGATGATTCCTTTGGTTG 1965
Query 1973 GTGGTTTATGGTAGTGttttctttttcttctctctttt------aatatttcttattttt 2026
||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct 1966 GTGGTTTATGGTAGTGTTTTCTTTTTCTTTTCTCTTTTTCCTTTAATATTTCTTATTTTT 2025
Query 2027 tATATCGAGTTATTATTACATTAGGATGATAATGATGATGATGGATGTGGATTTCTTTTC 2086
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2026 TATATCGAGTTATTATTACAGTAGGATGATAATGATGATGATGGATGTGGATTTCTTTTC 2085
Query 2087 TACAACTTAATTTGTGTTGTGGGCACTCTTCTTTGCCTTATGGTTTGTAATTTGTAAAGC 2146
||| ||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||
Sbjct 2086 TACGACTTAATTTGTGTTGTGGGCACTCTTCGTTGCCTT-TGGTTTGTAATT-GTAAAGC 2143
Query 2147 TCTGCTAGTTATTCTTTTTT-CGACCTAATTTGTGATCTAATGTAATGGGGATTATCTTT 2205
||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 2144 TCTGCTAGTAATTCTTTTTTTCGACCTAATTTGTGATCTAATGTAATGGG-ATTATCTTT 2202
Query 2206 TTAGTTTGGAATGTTCCCGTTGCATGTGGATTGTATTTATT 2246
|||||||||||||| ||||||||||||||||||| ||||||
Sbjct 2203 TTAGTTTGGAATGTACCCGTTGCATGTGGATTGTGTTTATT 2243
> Ahg920592 jgi|Araly1|920592|scaffold_101873.1
Length=1465
Score = 1533 bits (830), Expect = 0.0
Identities = 1241/1437 (86%), Gaps = 38/1437 (3%)
Strand=Plus/Plus
Query 403 AAATGGGTTCGAGATACGCATCTCACCAGCTCAGCAATGGGCTTTTTGTGTCTGGCCGGC 462
||||||||||||||||| ||||||| |||||||||||||| || ||||||||||| ||||
Sbjct 19 AAATGGGTTCGAGATACCCATCTCATCAGCTCAGCAATGGACTATTTGTGTCTGGTCGGC 78
Query 463 CAGAGCAACCCAAAGAAAAGCCTCCAACAATGAGCT-CAGTAGCCATGCCATACACCGGT 521
| |||||||||||||||| ||||||||| ||||| | ||||||||||||| ||||| |||
Sbjct 79 CTGAGCAACCCAAAGAAAGGCCTCCAACTATGAG-TGCAGTAGCCATGCCTTACACGGGT 137
Query 522 GGTGATATCAAGAAATCAGGAGAATTGGGGAAGATGTTTGACATTCCGA-CTGATGGGAC 580
|| || ||||||| ||||||||||||||||||||||||||| | ||| | | ||||| ||
Sbjct 138 GGCGACATCAAGAGATCAGGAGAATTGGGGAAGATGTTTGATA-TCCCAGCAGATGGTAC 196
Query 581 TAAGTCAAGGAAGTCTGGCCCCATAACC--G-G--------AGGATC--G-TCA--AG-A 623
|||||| ||||||||||| ||||| ||| | | ||| || | ||| | |
Sbjct 197 TAAGTCTAGGAAGTCTGGTCCCAT-ACCTGGTGCTCCTTCAAGG-TCTGGCTCATTTGCA 254
Query 624 AGTGGTGCGCAATCAGGTCCA-GTG--CCTAAT-GCAACTGGTCGTATGTCTGGCAATTT 679
| ||| ||||| |||||| ||| ||| || || ||||| |||||||||||| |||
Sbjct 255 GGAACTGCACAATCTGGTCCAGGTGCTCCT-ATGGCCACTGGCCGTATGTCTGGCTCTTT 313
Query 680 AGCTTCTGCTGGTTCAAATTCAATGAAGAAAACAAATTCTGGGCCTTTGTCTAAGCATGG 739
|||||||||||| || ||||||||||||||| ||||| || ||||| |||||||||||
Sbjct 314 AGCTTCTGCTGGCTCTGTTTCAATGAAGAAAACTAATTCCGGACCTTTATCTAAGCATGG 373
Query 740 GGAGCCTTTAAAGAAATCCTCTGGTCCGCAATCCGGTGGTGTAACAAGGCAAAATTCCGG 799
||||||||||||||||| ||||| || ||||| ||||||||||| |||||||||||||
Sbjct 374 AGAGCCTTTAAAGAAATCATCTGGCCCTCAATCTGGTGGTGTAACTCGGCAAAATTCCGG 433
Query 800 CCCTATTCCTATACTCCCAACTACAGGTCTCATAACATCTGGGCCAATTACCTCGGGGCC 859
|||||||||| || || |||||||||||||||| |||||||| ||||| ||||| ||
Sbjct 434 TTCTATTCCTATTCTTCCGGCTACAGGTCTCATAACCTCTGGGCCTATTACATCGGGCCC 493
Query 860 TCTAAATTCATCTGGGGCTCCTAGGAAAATTTCTGGTCCTCTAGACTATTCTGGTTCGAT 919
||| ||||||||||||||||| ||||| |||||||||| ||||||| |||||||| |||
Sbjct 494 TCTGAATTCATCTGGGGCTCCCAGGAAGGTTTCTGGTCCACTAGACTCTTCTGGTTTGAT 553
Query 920 GAAGACACATATGCCTTCAGTTGTCCACAACCAGGCGGTAACTACCCTTGCTCCGGAAGA 979
|||| ||||||| ||||| ||||||||||||||||||||||||||||||| ||| |||||
Sbjct 554 GAAGTCACATATCCCTTCTGTTGTCCACAACCAGGCGGTAACTACCCTTGGTCCAGAAGA 613
Query 980 TGACTTTTCCTGCATGAAAAGCTTCCCCAAGCCTGTGCTGTGGCTGGTTATACTTATATT 1039
||||||||||||| |||| |||||||| ||||||||||||||||||||| | ||||||||
Sbjct 614 TGACTTTTCCTGCCTGAAGAGCTTCCCAAAGCCTGTGCTGTGGCTGGTTGTTCTTATATT 673
Query 1040 TGTGATGGGGTTCCTCGCTGGAGGCTTCATTCTTGGAGCAGTTCACAATGCAATTCTCCT 1099
| ||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||
Sbjct 674 CATAATGGGGTTCCTTGCTGGAGGCTTCATTCTTGGTGCAGTTCACAACCCAATTCTCCT 733
Query 1100 CATAGTTGTGGCGGTCTTGTTCACAGTTGTTGCTGCACTTTTCATTTGGAATATTTCTTG 1159
| | ||||| ||| ||||||| |||||||||||||| ||||||||||||||||||| |||
Sbjct 734 CGTTGTTGTCGCGATCTTGTTTACAGTTGTTGCTGCGCTTTTCATTTGGAATATTTGTTG 793
Query 1160 TGAAAGACGTGGTATCACAGATTTCATCGCTCGTTATCCGGATGCTGATCTTAGAACTGC 1219
| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 794 GGGGAGACGTGGTATCACAGATTTCATTGCTCGTTATCCTGATGCTGATCTTAGAACTGC 853
Query 1220 CAAAAACGGTCAATATGTGAAGGTCACTGGGGTGGTCACCTGTGGTAACGTGCCTCTTGA 1279
|||||| |||||||| |||||||||||||||||||| || |||||||| || || |||||
Sbjct 854 CAAAAATGGTCAATACGTGAAGGTCACTGGGGTGGTTACTTGTGGTAATGTACCGCTTGA 913
Query 1280 ATCATCCTTCCATAGAGTTCCTAGGTGTGTTTACACGTCTACTTGTCTATATGAGTACCG 1339
||||||||||| ||||||||||| ||||| ||||| || || |||||||||||||| ||
Sbjct 914 GTCATCCTTCCACAGAGTTCCTAGATGTGTGTACACATCGACATGTCTATATGAGTATCG 973
Query 1340 TGGATGGGGTTC-AAAGCCAGCCAATGCTTCACATCGTCGCTTTACATGGGGACTGAGAT 1398
|||||||||||| ||| ||||||||| |||| ||||||| ||| ||||||||||||||||
Sbjct 974 TGGATGGGGTTCGAAA-CCAGCCAATTCTTCCCATCGTCACTTCACATGGGGACTGAGAT 1032
Query 1399 CAGCAGAGAGGCATGTGGTAGACTTCTACATTTCTGATTTCCAATCTGGGCTCAGGGCAT 1458
|| ||||||| |||||||| ||||| ||||| ||||||||||| ||||||||||| || |
Sbjct 1033 CATCAGAGAGACATGTGGTGGACTTTTACATCTCTGATTTCCAGTCTGGGCTCAGAGCCT 1092
Query 1459 TGGTCAAAACTGGAAACGGTGCAAAGGTAACACCGCTTGTCGATGATTCTGTTGTCATCG 1518
| |||||||| |||| |||||||||||||||||| ||||| |||||||||||||||||||
Sbjct 1093 TAGTCAAAACCGGAAGCGGTGCAAAGGTAACACCTCTTGTAGATGATTCTGTTGTCATCG 1152
Query 1519 ATTTTAAGCCAGGAAATGAGCAAGCCTCTCCAGACTTTGTAAGGTGGTTGGGTAAAAAGA 1578
||||||||| ||||| ||||||| ||||| || ||||| || ||||| |||| ||||
Sbjct 1153 ATTTTAAGCAAGGAAGCGAGCAAGTGTCTCCCGATTTTGTTAGATGGTTAAGTAAGAAGA 1212
Query 1579 ATCTAACCAAT-GATGATCGAATAATGCGGCTTAAAGAAGGGTATATCAAAGAAGGAAGC 1637
||||||| || |||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct 1213 ATCTAAC-AAGCGATGATCGAATAATGCGGCTCAAAGAAGGGTATATAAAAGAAGGAAGC 1271
Query 1638 ACAGTAAGTGTGATTGGAGTGGTTCAGAGAAACGATAACGTGTTAATGATAGTCCCGA-C 1696
||||| ||||||||||||||||| |||||||||||||| ||||| |||||||| || | |
Sbjct 1272 ACAGTGAGTGTGATTGGAGTGGTGCAGAGAAACGATAATGTGTTGATGATAGTTCC-ATC 1330
Query 1697 GA-CAGAACCATTAGCAGCTGGTTGGCAATGGAGTA-AGTGCACATTCCCTGCAAGTCTT 1754
| | || ||| |||||||||||||||||||||| | | |||||||||||| ||||||||
Sbjct 1331 -ATCTGAGCCACTAGCAGCTGGTTGGCAATGGAGGAGA-TGCACATTCCCTACAAGTCTT 1388
Query 1755 GAAGGAATTGTATTGAGATGCGAAGATTCATCGAACGTAGATGCAATTCCTGTCTGA 1811
|||||||| ||||||||||| ||||| ||||| || || ||||| || || || |||
Sbjct 1389 GAAGGAATCGTATTGAGATGTGAAGACTCATCCAATGTTGATGCCATACCGGTTTGA 1445
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 84560343900
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5