BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G78920.1 Length=3093 Score E Sequences producing significant alignments: (Bits) Value Ahg477059 jgi|Araly1|477059|fgenesh2_kg.2__2189__AT1G78920.2 4802 0.0 Ahg920584 jgi|Araly1|920584|scaffold_101865.1 826 0.0 Ahg924417 jgi|Araly1|924417|scaffold_105698.1 207 3e-52 > Ahg477059 jgi|Araly1|477059|fgenesh2_kg.2__2189__AT1G78920.2 Length=3393 Score = 4802 bits (2600), Expect = 0.0 Identities = 2815/2917 (97%), Gaps = 22/2917 (1%) Strand=Plus/Plus Query 19 gtagaaaaattaatttaggaaaaaaatattcggaaagttctgtgaaaaGTCTTCGGATTT 78 |||| ||| |||||||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct 1 GTAGCAAAGTTAATTTAGGAAAAAAATATTCCGAAAGTTCTCTGAAAAGTCTTCGGATTT 60 Query 79 AGAACGGAGACAGCGAGAGGATAGAGCGCTTCTTCGGCTACAACAAGCTTTCGCTAATGG 138 |||||||||| || ||||||| |||||||||||||||||| |||||||||||||||||| Sbjct 61 AGAACGGAGAGAGAGAGAGGAGAGAGCGCTTCTTCGGCTAGGACAAGCTTTCGCTAATGG 120 Query 139 CGGTTTCCTTCTGATCACTCTCACCGGAGCCGTCATCTTCTCTG-TTTTACCGATTTTTA 197 || |||||||||||||| ||||||||||||||||||||||||| |||||| |||||||| Sbjct 121 CGCTTTCCTTCTGATCA--CTCACCGGAGCCGTCATCTTCTCTGTTTTTACTGATTTTTA 178 Query 198 GGAAATTTTGATTGTGGTGGAAAC-TTGTTGTGGCAACTCTACTGAGAAAGTTTGAAGAA 256 || |||| || || | |||| ||| ||||||||||||||||||||||||||||||||||| Sbjct 179 GG-AATTGTGTTTATAGTGGGAACTTTGTTGTGGCAACTCTACTGAGAAAGTTTGAAGAA 237 Query 257 GCTGGAATCAAAGATATAGCTAGAGTTAAGAGGGTTCATACTAACTTGTGCTCG-TTTTG 315 ||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct 238 GCTGGAATC-AAGATATAGCTAGAGTTAAGAGGGTTCATACTAACTTGTGTTCGCTTTT- 295 Query 316 TGATGTGCTGTTGTTAACGTTTGGAGGAAAAAGTTGTAGTGTATTAAAATTCAGCGTCCG 375 ||||||| ||||||| ||| || | | |||| || |||||||||||||| Sbjct 296 CGATGTGC---TGTTAACATTT---GG----A---G-AGTGCATCAAAATTCAGCGTCCT 341 Query 376 AGTTCTGGGGCGGAGTTGCCCCATAGCATTGACTTTACGCCTCTACACATAGTCCGAAGG 435 ||||||||||| |||||||||||||||||||| ||||| ||||||| |||||||| |||| Sbjct 342 AGTTCTGGGGCTGAGTTGCCCCATAGCATTGATTTTACACCTCTACCCATAGTCCCAAGG 401 Query 436 GCTAATTCAGCTCAAAACATGATGATGGATGAAGATGTTGAGCAGGCCAGTTTGATGTCT 495 || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 402 GCAAATTCAGCTCAAAACATGATGATGGATGAAGATATTGAGCAGGCCAGTTTGATGTCT 461 Query 496 TTCAATGACAGGCCTAGGGCTTTTCCCAACATGCGTAGTAAAACCTATAGTCCACTGATA 555 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 462 TTCAATGACAGGCCTAGGGCTTTTCCCAACATGCGTAGTAAAACCTATAGTCCACTGATA 521 Query 556 TTCCGGATTATTAGGAAATTAAATGTCCGTGTCCTTTCGATAATTCTGCTTTTCTGCTTC 615 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 522 TTCCGGATTCTTAGGAAATTAAATGTCCGTGTCCTTTCGATAATTCTGCTTTTCTGCTTT 581 Query 616 GGAGCAATCTTTTACATGGGGGCAAGTACTTCTCCCATCATCGTGTTCGTCTTCACAGTA 675 ||||| ||||||||| |||| ||||||||||||||||| ||||||||||||||| ||||| Sbjct 582 GGAGCGATCTTTTACGTGGGAGCAAGTACTTCTCCCATAATCGTGTTCGTCTTCGCAGTA 641 Query 676 TGCATCATCAGCTTCCTTTTGTCAATATATCTAACCAAGTGGGTTTTAGCGAAAGATGAA 735 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct 642 TGCATCATCAGCTTTCTTTTGTCCATATATCTAACCAAGTGGGTTTTAGCGAAAGATGAA 701 Query 736 GGACCTCCAGAGATGGTTGAGATATCAGATGCTATACGTGATGGAGCTGAAGGTTTTTTC 795 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 702 GGACCTCCAGAGATGGTTGAGATATCAGATGCTATACGTGATGGAGCTGAAGGGTTTTTC 761 Query 796 AGAACGCAGTATAGCACTATATCCAAGATGGCCATTTTGCTAGCTTTTGTGATTCTTTGC 855 |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| Sbjct 762 AGAACGCAGTATAGCACTATATCCAAGATGGCTGTCTTGCTAGCTTTTGTGATTCTTTGC 821 Query 856 ATATATCTATTCCGTAGCTTAACTCCCCAGCAAGAGGCTGCTGGTTTAGGAAGGGCGATG 915 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 822 ATATATCTATTCCGTAGCTTAACTCCCCAGCAAGAGGCTGCTGGTTTAGGAAGGGCGATG 881 Query 916 TCTGCTTATATTACTGTTGCTGCATTTCTTTTGGGGGCTCTATGCTCAGGTATTGCTGGA 975 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 882 TCTGCCTATATTACTGTTGCTGCATTTCTTTTGGGGGCTCTATGCTCAGGTATTGCTGGA 941 Query 976 TATGTTGGAATGTGGGTGTCAGTTCGTGCTAATGTGCGGGTCTCCAGTGCTGCCAGACGA 1035 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 942 TATGTTGGAATGTGGGTGTCAGTTCGTGCTAATGTGCGGGTCTCCAGTGCTGCCAGACGA 1001 Query 1036 TCTGCGAGAGAAGCATTGCAGATAGCCGTTCGTGCTGGTGGGTTTTCAGCCCTGGTTGTT 1095 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1002 TCTGCGAGAGAAGCATTGCAGATAGCCGTTCGTGCTGGTGGGTTTTCAGCCCTGGTTGTT 1061 Query 1096 GTTGGTATGGCTGTGATTGGTATCGCCATCCTCTATTCTACATTTTATGTGTGGTTGGGC 1155 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1062 GTTGGTATGGCTGTGATTGGTATCGCCATCCTCTATTCTACATTTTATGTTTGGTTGGGC 1121 Query 1156 GTGGGTTCACCAGGCTCAATGAATGTTACTGACCTACCTCTTCTTCTTGTCGGATATGGT 1215 |||| |||||||||||||||||||||||||||||| ||||| ||||| || ||||||||| Sbjct 1122 GTGGATTCACCAGGCTCAATGAATGTTACTGACCTGCCTCTGCTTCTCGTGGGATATGGT 1181 Query 1216 TTTGGTGCTTCGTTTGTTGCCTTATTTGCTCAGTTGGGTGGTGGAATATATACTAAGGGA 1275 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1182 TTTGGTGCTTCGTTTGTTGCCTTATTTGCTCAGTTGGGTGGTGGAATATATACTAAGGGA 1241 Query 1276 GCTGATGTTGGGGCAGATCTCGTTGGGAAAGTTGAGCAGGGAATTCCCGAGGATGATCCT 1335 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1242 GCTGATGTTGGGGCAGATCTCGTTGGGAAAGTTGAGCAGGGAATTCCCGAGGATGATCCT 1301 Query 1336 CGAAATCCTGCTGTTATTGCTGATTTGGTTGGAGACAATGTGGGGGACTGTGCTGCTAGA 1395 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1302 CGAAATCCTGCTGTTATTGCTGATTTGGTTGGAGACAATGTGGGGGACTGTGCTGCTAGA 1361 Query 1396 GGTGCTGATTTATTTGAAAGTATAGCTGCAGAAATCATCAGTGCAATGATACTAGGTGGA 1455 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1362 GGTGCTGATTTATTTGAAAGTATAGCTGCAGAAATCATCAGTGCAATGATACTAGGTGGA 1421 Query 1456 ACAATGGCTAAGAAGTGCAAAATTGAAGATCCATCAGGCTTTATCCTTTTTCCTCTAGTT 1515 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1422 ACAATGGCTAAGAAGTGCAAAATTGAAGATCCATCAGGCTTTATCCTTTTTCCTCTAGTT 1481 Query 1516 GTTCATTCTTTTGACTTGATTATATCCTCAATTGGTATTCTATCAATCAAGGGAACACGT 1575 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1482 GTTCATTCTTTTGACTTGATTATATCATCAATTGGTATTCTATCAATCAAGGGAACACGT 1541 Query 1576 GATGCTAGTGTGAAATCTCCGGTAGAGGATCCAATGGCTGTACTTCAGAAAGGATATTCT 1635 ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1542 GATGCCAGTGTGAAATCTCCGGTAGAGGATCCAATGGCTGTACTTCAGAGAGGATATTCT 1601 Query 1636 CTGACAATTATATTAGCTGTTATAACATTTGGCGCGTCGACTCGCTGGCTGCTTTACACT 1695 ||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct 1602 CTGACTATTATATTAGCTGTTTTGACATTTGGCGCGTCGACTCGCTGGCTGCTTTACACT 1661 Query 1696 GAACAAGCTCCATCTGCATGGTTCAATTTCGCCCTATGTGGGTTGGTTGGCATCATCACA 1755 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1662 GAACAGGCTCCATCTGCATGGTTCAATTTCGCCCTATGTGGGTTGGTTGGCATCATCACA 1721 Query 1756 GCCTATATCTTTGTCTGGATATCCAAATATTATACAGACTATAAGCACGAGCCTGTTCGG 1815 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1722 GCCTATATCTTTGTCTGGATATCCAAATATTATACAGACTATAAGCACGAGCCTGTTCGA 1781 Query 1816 ACGTTGGCTCTTGCTAGCTCGACTGGTCATGGGACTAATATCATTGCTGGAGTAAGCTTG 1875 |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct 1782 ACGTTGGCTCTTGCTAGCTCGACTGGTCATGGGACTAATATCATTGCTGGGGTCAGCTTG 1841 Query 1876 GGCCTGGAATCAACTGCTCTTCCAGTTTTGACTATAAGTGTAGCTATTATTTCTGCGTAT 1935 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1842 GGCCTGGAATCAACTGCTCTTCCAGTTTTGACTATAAGTGTAGCTATTATTTCTGCGTAT 1901 Query 1936 TGGTTGGGCAATACCTCGGGTCTAGTGGACGAAAATGGTATTCCCACTGGAGGTCTATTT 1995 ||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct 1902 TGGCTGGGCAATACCTCGGGACTAGTGGACGAAAATGGCATTCCCACTGGAGGTCTATTT 1961 Query 1996 GGAACAGCCGTTGCTACAATGGGAATGCTAAGCACTGCAGCTTATGTCCTTACTATGGAC 2055 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1962 GGAACAGCCGTTGCTACAATGGGAATGCTAAGCACTGCAGCTTATGTCCTTACTATGGAC 2021 Query 2056 ATGTTTGGCCCCATAGCTGACAACGCTGGTGGGATTGTCGAGATGAGCCAGCAGCCAGAG 2115 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2022 ATGTTTGGCCCCATAGCTGACAACGCTGGTGGGATTGTCGAGATGAGCCAGCAGCCAGAA 2081 Query 2116 AGTGTCCGTGAGATCACTGATCTTCTTGATGCTGTTGGGAACACCACAAAAGCAACAACG 2175 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2082 AGTGTCCGTGAGATCACTGATCTTCTTGATGCTGTTGGGAACACCACAAAAGCAACAACG 2141 Query 2176 AAAGGGTTTGCCATTGGATCTGCTGCACTTGCATCATTCCTTCTCTTTAGTGCGTATATG 2235 |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct 2142 AAAGGGTTTGCCATTGGATCTGCTGCCCTTGCGTCATTCCTTCTCTTTAGTGCGTATATG 2201 Query 2236 GACGAGGTTTCAGCGTTTGCTAATGTGTCTTTCAAAGAGGTTGATATTGCTATCCCAGAA 2295 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2202 GACGAGGTTTCAGCGTTTGCTAATGTGTCTTTCAAAGAGGTTGATATTGCTATCCCAGAA 2261 Query 2296 GTGTTCGTTGGTGGATTATTGGGTGCCATGCTTATTTTCCTCTTTAGTGCTTGGGCATGC 2355 |||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct 2262 GTGTTCGTAGGTGGGTTATTGGGTTCCATGCTTATTTTCCTCTTTAGTGCTTGGGCATGT 2321 Query 2356 GCGGCAGTTGGTCGAACTGCACAAGAGGTTGTCAACGAAGTAAGAAGGCAATTTATTGAG 2415 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 2322 GCGGCAGTTGGTCGAACTGCACAAGAGGTTGTCAACGAAGTAAGAAGACAATTTATTGAG 2381 Query 2416 AGGCCTGGCATAATGGAGTACAAGGAGAAGCCAGATTATAGTCGCTGTGTCGCCATAGTC 2475 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 2382 AGGCCTGGCATAATGGAGTACAAGGAGAAGCCAGATTATAGTCGCTGTGTCGCCATTGTC 2441 Query 2476 GCATCTGCAGCTTTAAGAGAAATGATAAAGCCAGGAGCTTTAGCTATTGCATCACCCATT 2535 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 2442 GCATCTGCAGCTTTAAGGGAAATGATAAAGCCAGGAGCTTTAGCTATTGCATCACCCATT 2501 Query 2536 GTAGTTGGTTTGGTGTTTCGAATCTTGGGTTACTACACAGGACAACCTCTGCTCGGAGCA 2595 |||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||| Sbjct 2502 GTAGTTGGTTTGGTTTTTCGGATTTTGGGTTACTACACAGGACAACCTCTGCTCGGAGCA 2561 Query 2596 AAAGTTGTAGCTTCTATGCTCATGTTTGCAACAGTTTGTGGTATCTTAATGGCACTTTTC 2655 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2562 AAAGTTGTAGCTTCTATGCTCATGTTTGCAACAGTTTGTGGTATCTTAATGGCACTTTTC 2621 Query 2656 CTAAACACGGCGGGAGGTGCTTGGGACAATGCAAAGAAATACATAGAGACCGGGGCACTT 2715 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 2622 CTAAACACGGCGGGAGGTGCTTGGGACAATGCAAAGAAATACATAGAGACTGGGGCACTT 2681 Query 2716 GGGGGCAAAGGAAGTGAAGCTCACAAAGCAGCTGTGACTGGTGATACCGTGGGAGATCCG 2775 ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 2682 GGGGGGAAAGGAAGTGAAGCCCACAAAGCAGCTGTGACTGGTGATACCGTGGGAGATCCG 2741 Query 2776 TTCAAGGACACAGCCGGTCCATCCATTCACGTCCTCATAAAAATGCTTGCGACTATAACT 2835 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 2742 TTCAAGGACACAGCCGGTCCATCCATTCACGTCCTCATAAAAATGCTCGCGACTATAACT 2801 Query 2836 CTCGTCATGGCTCCGGTTTTCCTCTGAAAGTGAACCGTTACTTATCCATCCCGGCTTATT 2895 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2802 CTCGTCATGGCTCCGGTTTTCCTCTGAAAGTGAACCGTTACTTATCCATCCCGGCTTATA 2861 Query 2896 TACTCTCTTGCACATATACAAATAGAGAGGGAGAGAG 2932 ||||||||||||||||||||||||||||||||||||| Sbjct 2862 TACTCTCTTGCACATATACAAATAGAGAGGGAGAGAG 2898 > Ahg920584 jgi|Araly1|920584|scaffold_101865.1 Length=1355 Score = 826 bits (447), Expect = 0.0 Identities = 602/679 (89%), Gaps = 2/679 (0%) Strand=Plus/Plus Query 1567 GGAACACGTGATGCTAGTGTGAAATCTCCGGTAGAGGATCCAATGGCTGTACTTCAGAAA 1626 ||||| || ||||||||||||||||||| |||||||||||||||| ||| ||||||||| Sbjct 72 GGAACTCGCAATGCTAGTGTGAAATCTCCAGTAGAGGATCCAATGGTTGTGCTTCAGAAA 131 Query 1627 GGATATTCTCTGACAATTATATTAGCTGTTATAACATTTGGCGCGTCGACTCGCTGGCTG 1686 |||||||| ||||| ||||||||||| ||| | ||||||||||||||||||||||||||| Sbjct 132 GGATATTCGCTGACTATTATATTAGCCGTTTTGACATTTGGCGCGTCGACTCGCTGGCTG 191 Query 1687 CTTTACACTGAACAAGCTCCATCTGCATGGTTCAATTTCGCCCTATGTGGGTTGGTTGGC 1746 |||||||| ||||||||||||||||| ||| | ||||| | | ||||| ||||||||| Sbjct 192 CTTTACACAGAACAAGCTCCATCTGCTTGGGTGAATTTTTTCATGTGTGGCTTGGTTGGC 251 Query 1747 ATCATCACAGCCTATATCTTTGTCTGGATATCCAAATATTATACAGACTATAAGCACGAG 1806 || |||||||||||| |||||||||||||||||| ||||| ||| ||||||||| | ||| Sbjct 252 ATTATCACAGCCTATGTCTTTGTCTGGATATCCAGATATTCTACTGACTATAAGTATGAG 311 Query 1807 CCTGTTCGGACGTTGGCTCTTGCTAGCTCGACTGGTCATGGGACTAATATCATTGCTGGA 1866 ||||||||||||||||||||||||||||| ||||||||||| || ||||| |||||||| Sbjct 312 CCTGTTCGGACGTTGGCTCTTGCTAGCTCCACTGGTCATGGAACCAATATAATTGCTGGG 371 Query 1867 GTAAGCTTGGGCCTGGAATCAACTGCTCTTCCAGTTTTGACT-ATAAGTGTAGCTATTAT 1925 || |||||||| ||||| || || |||||||| ||||| | | | |||||||||||| || Sbjct 372 GTCAGCTTGGGTCTGGAGTCCACGGCTCTTCCTGTTTT-AGTTACAAGTGTAGCTATCAT 430 Query 1926 TTCTGCGTATTGGTTGGGCAATACCTCGGGTCTAGTGGACGAAAATGGTATTCCCACTGG 1985 |||||| | |||| |||||||||||||||| ||| |||| ||||| || | |||| || Sbjct 431 TTCTGCTTTTTGGCTGGGCAATACCTCGGGACTAATGGATGAAAAGGGAAACCCCATTGC 490 Query 1986 AGGTCTATTTGGAACAGCCGTTGCTACAATGGGAATGCTAAGCACTGCAGCTTATGTCCT 2045 |||||||||||||||||| || ||||||||||||||||| ||||||||||||||||| || Sbjct 491 AGGTCTATTTGGAACAGCTGTAGCTACAATGGGAATGCTGAGCACTGCAGCTTATGTTCT 550 Query 2046 TACTATGGACATGTTTGGCCCCATAGCTGACAACGCTGGTGGGATTGTCGAGATGAGCCA 2105 ||| |||||||||||||| || |||||||| || || ||||||||||| ||||||||||| Sbjct 551 TACAATGGACATGTTTGGTCCTATAGCTGATAATGCAGGTGGGATTGTTGAGATGAGCCA 610 Query 2106 GCAGCCAGAGAGTGTCCGTGAGATCACTGATCTTCTTGATGCTGTTGGGAACACCACAAA 2165 ||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct 611 GCAGCCAGAAAGTGTCCGTGAGATCACTGATGTTCTTGATGCTGTTGGGAATACCACAAA 670 Query 2166 AGCAACAACGAAAGGGTTTGCCATTGGATCTGCTGCACTTGCATCATTCCTTCTCTTTAG 2225 ||||||||| ||||||||||| ||||||||||| || ||||||||||||||||| ||||| Sbjct 671 AGCAACAACAAAAGGGTTTGCTATTGGATCTGCAGCCCTTGCATCATTCCTTCTTTTTAG 730 Query 2226 TGCGTATATGGACGAGGTT 2244 ||| |||||||| |||||| Sbjct 731 TGCCTATATGGATGAGGTT 749 Score = 654 bits (354), Expect = 0.0 Identities = 514/593 (87%), Gaps = 4/593 (1%) Strand=Plus/Plus Query 2272 GAGGTTGATATTGCTATCCCAGAAGTGTTCGTTGGTGGATTATTGGGTGCCATGCTTATT 2331 |||||||||||||| ||||||||||| ||| | ||||| ||||| |||||||||||||| Sbjct 744 GAGGTTGATATTGCGATCCCAGAAGTCTTCATCGGTGGGTTATTAGGTGCCATGCTTATA 803 Query 2332 TTCCTCTTTAGTGCTTGGGCATGCGCGGCAGTTGGTCGAACTGCACAAGAGGTTGTCAAC 2391 ||||| ||||| |||||||| || || |||||||||||||||||||| ||||||||||| Sbjct 804 TTCCTGTTTAGCGCTTGGGCTTGTGCAGCAGTTGGTCGAACTGCACAGGAGGTTGTCAAT 863 Query 2392 GAAGTAAGAAGGCAATTTATTGAGAGGCCTGGCATAATGGAGTACAAGGAGAAGCCAGAT 2451 ||||||||||| || || ||||||||||||||||||||||| |||||||||||||||||| Sbjct 864 GAAGTAAGAAGACAGTTCATTGAGAGGCCTGGCATAATGGACTACAAGGAGAAGCCAGAT 923 Query 2452 TATAGTCGCTGTGTCGCCATAGTCGCATCTGCAGCTTTAAGAGAAATGATAAAGCCAGGA 2511 ||| |||| ||||| ||||| ||||||||| ||||||| || ||||||||||| |||||| Sbjct 924 TATGGTCGATGTGTTGCCATTGTCGCATCTTCAGCTTTGAGGGAAATGATAAAACCAGGA 983 Query 2512 GCTTTAGCTATTGCATCACCCATTGTAGTTGGTTTGGTGTTTCGAATCTTGGGTTACTAC 2571 ||||| ||||| |||||||| || ||||||||| ||||| || |||||||| |||||| Sbjct 984 GCTTTGGCTATAATATCACCCACTGCAGTTGGTTTTGTGTTCCGGATCTTGGGATACTAC 1043 Query 2572 ACAGGACAACCTCTGCTCGGAGCAAAAGTTGTAGCTTCTATGCTCATGTTTGCAACAGTT 2631 ||||||||||||||||| ||||| ||||| |||||| | ||||| ||||||||||| || Sbjct 1044 ACAGGACAACCTCTGCTAGGAGCTAAAGTAGTAGCTGCAATGCTAATGTTTGCAACGGTG 1103 Query 2632 TGTGGTATCTTAATGGCACTTTTCCTAAACACGGCGGGAGGTGCTTGGGACAATGCAAAG 2691 ||||||||||||||||| |||||| |||| || || |||||||||||||||||||||||| Sbjct 1104 TGTGGTATCTTAATGGCTCTTTTCTTAAATACAGCAGGAGGTGCTTGGGACAATGCAAAG 1163 Query 2692 AAATACATAGAGACCGGGGCACTTGGGGGCAAAGGAAGTGAAGCTCACAAAGCAGCTGTG 2751 |||||||| ||||| || || || || |||||||||||||| |||| ||||| || || Sbjct 1164 AAATACATTGAGACAGGAGCTCTAGGAGGCAAAGGAAGTGATTCTCATAAAGCTGCAGTA 1223 Query 2752 ACTGGTGATACCGTGGGAGATCCGTTCAAGGACACAGCCGGTCCATCCATTCACGTCCTC 2811 ||||||||||| |||||||| || |||||||||||||| || || || |||||||| ||| Sbjct 1224 ACTGGTGATACTGTGGGAGACCCTTTCAAGGACACAGCAGGACCGTCGATTCACGTTCTC 1283 Query 2812 ATAAAAATGCTTG-CGACTATAACTCTCGTCATGGCTCCGGT-TTTCCTCTGA 2862 || |||||| ||| ||||||| || || ||||||||||| | |||| ||||| Sbjct 1284 ATCAAAATG-TTGGCGACTATCACGCTTGTCATGGCTCCAATCTTTC-TCTGA 1334 > Ahg924417 jgi|Araly1|924417|scaffold_105698.1 Length=793 Score = 207 bits (112), Expect = 3e-52 Identities = 166/189 (88%), Gaps = 15/189 (8%) Strand=Plus/Plus Query 1010 TGCGGGTCTCCAGTGCTGCCAGACGATCTGCGAGAGAAGCATTGCAGATAGCCGTTCGTG 1069 |||||||||||||||| | | |||||||| ||||||||||||||| ||||||||||| Sbjct 436 TGCGGGTCTCCAGTGCCGTCGGACGATCTTCGAGAGAAGCATTGC----AGCCGTTCGTG 491 Query 1070 CTGGTGGGTTTTCAGCCCTGG-T-T-GTT-G--T--TGGTATGGCTGTGATTGGTATC-G 1120 ||||||||||||||| ||||| | | ||| | | |||||||||||||||||||| | | Sbjct 492 CTGGTGGGTTTTCAG-CCTGGTTGTAGTTGGTATCATGGTATGGCTGTGATTGGTA-CTG 549 Query 1121 CCATCCTCTATTCTACATTTTATGTGTGGTTGGGCGTGGGTTCACCAGGCTCAATGAATG 1180 |||||||||||| |||||||||||| ||||||||| ||| |||||||||||||||||||| Sbjct 550 CCATCCTCTATTTTACATTTTATGTTTGGTTGGGCATGGATTCACCAGGCTCAATGAATG 609 Query 1181 TTACTGACC 1189 ||||||||| Sbjct 610 TTACTGACC 618 Score = 97.1 bits (52), Expect = 7e-19 Identities = 54/55 (98%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 909 GGCGATGTCTGCTTATATTACTGTTGCTGCATTTCTTTTGGGGGCTCTATGCTCA 963 |||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 241 GGCGATGTCTGCCTATATTACTGTTGCTGCATTTCTTTTGGGGGCTCTATGCTCA 295 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 116822781415 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5