BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G80300.1
Length=2212
Score E
Sequences producing significant alignments: (Bits) Value
Ahg477222 jgi|Araly1|477222|fgenesh2_kg.2__2352__AT1G80300.1 3308 0.0
Ahg471751 jgi|Araly1|471751|fgenesh2_kg.1__1705__AT1G15500.1 2032 0.0
> Ahg477222 jgi|Araly1|477222|fgenesh2_kg.2__2352__AT1G80300.1
Length=2167
Score = 3308 bits (1791), Expect = 0.0
Identities = 2069/2198 (94%), Gaps = 39/2198 (2%)
Strand=Plus/Plus
Query 1 CAACCAGtctcctttatcatctctccatctcatcatcctcctccatttctctcccatttt 60
||||||||||||||||||||||||| ||||||||| || || || |||
Sbjct 1 CAACCAGTCTCCTTTATCATCTCTCTATCTCATCA------ACC---TC-CT-CCA---- 45
Query 61 ttcttctGTGTATCTGCGGGAGAGAGT-GAAATAGAGAGATGGAAGCTGTGATTCAAACC 119
|| ||||||||||| |||||||||| | || |||||||||||||||||| ||| |||||
Sbjct 46 TT-TTCTGTGTATCCGCGGGAGAGA-TAGAGATAGAGAGATGGAAGCTGCGATACAAACG 103
Query 120 AGAGGGCTTCTCTCTTTACCCACCAAACCCATCGGAGTGAGAAGCCAACTTCAGCCTTCC 179
||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 104 AGAGGACTTCTCTCCTTACCCACCAAACCCATCGGAGTGAGAAGCCTTCTTCAGCCTTCC 163
Query 180 CATGGCTTAAAGCAGAGACTTTTCGCCGCGAAGCCAAGAAATCTACATGGGTTGTCTCTA 239
|| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||| ||
Sbjct 164 CACGGCTTAAAGCAGAGACTTTTCGCCACGAAGCCAAGAAATCTACCTGGGTTCTCTATA 223
Query 240 TCCTTTAACGGGCACAAGAAATTTCAAACCTTTGAGCCAACCCTGCATGGGATTTCGATT 299
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct 224 TCCTTTAACGGGCACAAGAAATTTCAAACCTTTGAGCCAACCCTTCATGGGATTTCAATT 283
Query 300 TCCCACAAAGAGAGAAGCACCGAGTTCATATGCAAGGCGGAGGCCGCGGCTGCTGGCGAC 359
|||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct 284 TCCCACAAAGAGAGAAGCACCGAGTTCATATGCAAGGCCGAGGCCGCGGCCGCCGGCGAC 343
Query 360 GGAGCTGTCTTCGGCGAAGGCGATTCCGCAGCTGTTGTAGCCTCGCCGAAGATTTTCGGT 419
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 344 GGAGCTGTCTTCGGCGAAGGCGATTCCGCAGCTGTTGTAGCGTCGCCGAAGATTTTCGGT 403
Query 420 GTGGAGGTTGCAACCTTGAAAAAGATTATCCCTTTAGGATTGATGTTCTTTTGTATTCTT 479
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 404 GTGGAGGTTGCAACCTTGAAAAAGATTATCCCTTTAGGATTGATGTTCTTCTGTATTCTT 463
Query 480 TTCAATTACACAATTCTGAGGGATACAAAGGATGTCTTGGTGGTGACGGCGAAAGGAAGT 539
||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||
Sbjct 464 TTCAATTACACAATTCTAAGGGACACAAAGGACGTCTTGGTGGTGACGGCGAAAGGAAGC 523
Query 540 TCTGCTGAGATTATACCTTTCTTGAAGACTTGGGTGAATCTTCCTATGGCCATTGGGTTT 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 524 TCTGCTGAGATTATACCTTTCTTGAAGACTTGGGTGAATCTTCCTATGGCCATTGGGTTT 583
Query 600 ATGCTCCTCTACACTAAACTCTCCAATGTTCTCTCCAAGAAGGCTCTGTTTTACACTGTT 659
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 584 ATGCTCCTCTACACTAAACTCTCCAATGTTCTCTCCAAGAAGGCTCTGTTTTACACCGTT 643
Query 660 ATTGTCCCTTTCATCATCTACTTTGGGGCCTTTGGTTTCGTCATGTACCCTCTCAGCAAC 719
||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 644 ATTATCCCTTTCATCGTCTACTTTGGGGCCTTTGGTTTCGTGATGTACCCTCTCAGCAAC 703
Query 720 TATATTCACCCGGAAGCTCTCGCAGATAAGCTCCTTACAACCCTCGGCCCAAGATTCATG 779
|| ||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct 704 TACATTCATCCGGAAGCTCTCGCAGATAAGCTCCTTGCAACCCTCGGCCCTAGATTCATG 763
Query 780 GGTCCTATTGCAATATTGCGGATTTGGAGTTTCTGTTTGTTTTATGTTATGGCTGAGCTT 839
|||||| ||||||| ||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct 764 GGTCCTCTTGCAATCTTGCGTATTTGGAGTTTCTGTTTGTTTTATGTCATGGCTGAGCTT 823
Query 840 TGGGGTAGTGTGGTGGTCTCAGTTCTCTTCTGGGGCTTTGCTAATCAGATCACAACTGTG 899
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 824 TGGGGTAGTGTGGTGATCTCAGTTCTCTTCTGGGGCTTTGCTAATCAGATCACAACTGTG 883
Query 900 GATGAAGCCAAGAAATTCTATCCTTTGTTCGGACTTGGAGCCAATGTTGCACTGATTTTC 959
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 884 GATGAAGCCAAGAAATTCTATCCTTTGTTCGGACTTGGAGCCAATGTTGCGCTGATTTTC 943
Query 960 TCAGGAAGAACCGTGAAATACTTCTCTAACTTGAGAAAGAATCTTGGTCCTGGAGTTGAC 1019
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 944 TCCGGAAGAACCGTGAAATACTTCTCTAACTTGAGAAAGAATCTTGGTCCTGGAGTTGAC 1003
Query 1020 GGCTGGGCAGTTTCGTTGAAAGCCATGATGAGCATTGTGGTGGGAATGGGACTCGCCATT 1079
|||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||
Sbjct 1004 GGCTGGGCAGTTTCGTTGAAAGCCATGATGAGTATTGTCGTGGGAATGGGGCTCGCCATC 1063
Query 1080 TGTCTCCTCTATTGGTGGGTCAATAGATATGTTCCTCTTCCAACCCGTAGCAAGAACAAG 1139
||| ||||||| ||||||||||||||||| ||||||||||||||||| |||||||| |||
Sbjct 1064 TGTTTCCTCTACTGGTGGGTCAATAGATACGTTCCTCTTCCAACCCGCAGCAAGAAGAAG 1123
Query 1140 AAGGAGAAACCGAAGATGGGAACGATGGAAAGCTTGAAGTTCTTGGTATCATCACCATAC 1199
||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct 1124 AAGGAGAAACCGAAGATGGGAACAATGGAAAGCTTGAAGTTCTTGGTGTCATCACCATAC 1183
Query 1200 ATTAGAGATCTTGCTACTTTAGTGGTGGCATACGGTATTAGTATCAATCTTGTGGAAGTC 1259
||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1184 ATTAGGGATCTTGCTACTTTAGTGGTGGCATACGGTATTAGTATCAACCTTGTGGAAGTC 1243
Query 1260 ACATGGAAATCAAAGCTTAAAGCTCAGTTCCCTAGCCCGAATGAGTACTCAGCATTTATG 1319
|| |||||||||||||||||||||||||| ||||| || || ||||||||||||||||||
Sbjct 1244 ACTTGGAAATCAAAGCTTAAAGCTCAGTTTCCTAGTCCAAACGAGTACTCAGCATTTATG 1303
Query 1320 GGAGACTTCTCAACCTGCACGGGTGTTGCAACATTCACAATGATGCTTCTCAGCCAATAC 1379
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1304 GGAGACTTCTCAACCTGCACGGGTATTGCAACATTCACAATGATGCTTCTCAGCCAATAT 1363
Query 1380 GTATTCAATAAGTATGGTTGGGGAGTAGCTGCAAAGATCACCCCAACTGTTCTGCTATTG 1439
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1364 GTATTCGATAAGTATGGTTGGGGAGTAGCTGCAAAGATCACCCCAACTGTTCTGCTATTG 1423
Query 1440 ACTGGTGTTGCGTTCTTCTCTCTAATATTGTTTGGCGGCCCATTCGCACCACTTGTTGCC 1499
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1424 ACTGGTGTTGCGTTCTTCTCTCTGATATTGTTTGGCGGCCCATTCGCACCACTTGTTGCC 1483
Query 1500 AAGCTTGGTATGACACCGCTACTTGCAGCTGTGTATGTCGGTGCCCTTCAGAATATCTTC 1559
||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||
Sbjct 1484 AAGCTTGGTATGACACCGCTACTCGCAGCTGTGTATGTTGGTGCCCTTCAGAATATTTTC 1543
Query 1560 AGCAAGAGTGCCAAGTACAGCTTGTTCGACCCTTGCAAAGAAATGGCCTATATCCCATTG 1619
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1544 AGCAAGAGTGCCAAGTACAGCTTGTTCGATCCTTGCAAAGAAATGGCCTATATCCCATTG 1603
Query 1620 GATGAGGACACCAAGGTTAAAGGCAAAGCTGCGATTGACGTGGTCTGCAACCCATTAGGG 1679
|||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct 1604 GATGAGGACACCAAGGTTAAAGGCAAAGCTGCGATTGATGTGGTCTGCAACCCGTTAGGG 1663
Query 1680 AAATCAGGGGGAGCTTTAATACAGCAGTTCATGATCTTATCCTTTGGATCACTAGCGAAT 1739
|||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1664 AAATCAGGAGGAGCTTTAATACAGCAGTTCATGATCTTATCATTTGGATCACTAGCGAAT 1723
Query 1740 TCAACGCCGTATCTAGGAATGATCTTGTTGGTTATTGTCACTGCGTGGTTAGCTGCAGCT 1799
||||| |||||||||||||||||||||||||| ||||||||||| |||||||| ||||||
Sbjct 1724 TCAACTCCGTATCTAGGAATGATCTTGTTGGTAATTGTCACTGCATGGTTAGCAGCAGCT 1783
Query 1800 AAGTCGCTGGAGGGACAGTTCAACAGCTTGCGGTCTGAAGAAGAGCTTGAGAAGGAAATG 1859
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1784 AAGTCGCTGGAGGGACAGTTCAACAGCTTGCGGTCTGAAGAAGAGCTTGAGAAGGAAATG 1843
Query 1860 GAGAGAGCTTCATCGGTGAAGATCCCTGTCGTGTCTCAGGACGAAAGCGGAAACGGTTCC 1919
|||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||
Sbjct 1844 GAGAGAGCTTCATCCGTGAAGATCCCTGTCGTGTCTCAGGAAGAAAGCGGGAACGGTTCC 1903
Query 1920 CTTGGAGAATCTCCTAGCAGTTCACCGGAGAAATCTGCTCCCACCAACTTATAAAAAGtt 1979
|||| |||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct 1904 CTTGAAGAATCTCCTAGCAGTTCGCCAGAGAAATCTGCTCCCACCAACTTATAAAAAGTT 1963
Query 1980 ttttttt------GATATTTGGTTTTGTTgggggggAAAGAAAGAAGGATGATGAATCAA 2033
||||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1964 TTTTTTTTTTTTTGATATTTGGTTTTGTTGGGGGGTAAAGAAAGAAGGATGATGAATCAA 2023
Query 2034 AAATAAGATTTTGAGAGCAGTCTCTCAAACAATCGCCCTTTTGCACCACTCACTCTTTAT 2093
|||||||||||||||| ||||||| |||||||||||||||||||||||| | ||||||||
Sbjct 2024 AAATAAGATTTTGAGACCAGTCTCACAAACAATCGCCCTTTTGCACCACCC-CTCTTTAT 2082
Query 2094 AGTCTGTAGCttttttt-tCCTTACATTCTTTTCAGTTCAATGTGGTTTCACGTTCTAAG 2152
|||| |||||||||||| | ||||||||||||||||| |||||||||| | ||
Sbjct 2083 AGTCGGTAGCTTTTTTTATTTTTACATTCTTTTCAGTTAAATGTGGTTT----T-CT--- 2134
Query 2153 TTTCTTCCTTGTGTGTATCGTTGAAGTCAAAAAGATAA 2190
| | | ||||||||||||||||||||||||||||||
Sbjct 2135 T--C--C-TTGTGTGTATCGTTGAAGTCAAAAAGATAA 2167
> Ahg471751 jgi|Araly1|471751|fgenesh2_kg.1__1705__AT1G15500.1
Length=2125
Score = 2032 bits (1100), Expect = 0.0
Identities = 1593/1828 (87%), Gaps = 45/1828 (2%)
Strand=Plus/Plus
Query 91 ATAGAGAGATGGAAGCTGTGATTCAAACCAGAGGGCTTCTCTCTTTACCCACCAAACCCA 150
||||||||||||||| | |||||||||||||||| |||||||||||||| | |||||||
Sbjct 98 ATAGAGAGATGGAAGGTCTGATTCAAACCAGAGGAATTCTCTCTTTACCCGCAAAACCCA 157
Query 151 TCGGAGTGAG-AAGCCAACTTCAGCCTTCCCATGGCTTAAAGCAGAGACTTTTCGCCGCG 209
|||||| ||| ||| | ||||| || || |||||||||||||| ||||||||| | |
Sbjct 158 TCGGAGCGAGAAAG-CTTCTTCAACCCTCTCATGGCTTAAAGCAAAGACTTTTC-AC-C- 213
Query 210 AAGCCAAGAAATCTACATGGGTTGT-CTCTATCCTTTAACGGGCACAAGAAATTTCAAAC 268
| | | || | ||| | |||| || |||||| ||| ||||||| ||||||||| |
Sbjct 214 -A--C-A-AACT-TACCTTCCTTGTCCT-TATCCTCTAATGGGCACACCAAATTTCAAGC 266
Query 269 CTTTGAGCCAA-CCCTGCATGGGATTTC-GATTTCCCACAAAGAGAGAAGCACCGA-G-T 324
|||| || ||| ||| ||||||||||| | |||||||||| |||||||||| || | |
Sbjct 267 CTTTCAGTCAATCCC-ACATGGGATTTCTG-TTTCCCACAAGGAGAGAAGCA--GAGGAT 322
Query 325 TCATATGCAAGGCGGAGGCCGCGGCTGCTGGCGACGGAGCTGTCTTCGGCGAAGGCGATT 384
|||| |||||||||||||| ||||| || || |||||| ||| |||| || ||| ||
Sbjct 323 TCATCTGCAAGGCGGAGGCTGCGGCGGCCGGAGACGGAAATGTGTTCGACGGAGGAGACA 382
Query 385 CCGCAGCTG-TTGT-AGCCTCGCCGAAGATTTTCGGTGTGGAGGTTGCAACCTTGAAAAA 442
| || || | || | || ||||| |||||||| |||||||||||| | || ||||| ||
Sbjct 383 CGGCGGC-GATT-TCGGCGTCGCCTAAGATTTTTGGTGTGGAGGTTACGACTTTGAAGAA 440
Query 443 GATTATCCCTTTAGGATTGATGTTCTTTTGTATTCTTTTCAATTACACAATTCTGAGGGA 502
|||| | |||||||| | ||||||||||| |||||||||||||||||||| || |||||
Sbjct 441 GATTGTTCCTTTAGGGCTAATGTTCTTTTGCATTCTTTTCAATTACACAATCCTTAGGGA 500
Query 503 TACAAAGGATGTCTTGGTGGTGACGGCGAAAGGAAGTTCTGCTGAGATTATA-CCTTTCT 561
|| |||||||| |||||||||||||| |||||||||||||||||||||||| ||||| |
Sbjct 501 CACGAAGGATGTTTTGGTGGTGACGGCTAAAGGAAGTTCTGCTGAGATTATACCCTTT-T 559
Query 562 TGAAGACTTGGGTGAATCTTCCTATGGCCATTGGGTTTATGCTCCTCTACACTAAACTCT 621
||||||| |||||||||||||| ||||| |||||||| ||| | || ||||| ||||| |
Sbjct 560 TGAAGACATGGGTGAATCTTCCGATGGCTATTGGGTTCATGTTGCTATACACCAAACTTT 619
Query 622 CCAATGTTCTCTCCAAGAAGGCTCTGTTTTACACTGTTATTGTCCCTTTCATCATCTACT 681
|||||||||||||||| |||||||| |||||||||||||||||||||||||| ||||||
Sbjct 620 CCAATGTTCTCTCCAAAAAGGCTCTCTTTTACACTGTTATTGTCCCTTTCATTGTCTACT 679
Query 682 TTGGGGCCTTTGGTTTCGTCATGTACCCTCTCAGCAACTAT-ATTCACCCGGAAGCTCTC 740
|||| |||||||||||||| ||||||||||||||||| | | |||||||| ||||||||
Sbjct 680 TTGGAGCCTTTGGTTTCGTGATGTACCCTCTCAGCAA-TTTGATTCACCCTGAAGCTCTT 738
Query 741 GCAGATAAGCTCCTTACAACCCTCGGCCCAAGATTCATGGGTCCTATTGCAAT-ATTGCG 799
|| |||||||| ||| |||| |||||||| ||||||||||||||| | ||||| | ||||
Sbjct 739 GCTGATAAGCTTCTTGCAACACTCGGCCCCAGATTCATGGGTCCTCTCGCAATCA-TGCG 797
Query 800 GATTTGGAGTTTCTGTTTGTTTTATGTTATGGCTGAGCTTTGGGGTAGTGTGGTGGTCTC 859
||||||||||||||||||||| ||||| ||||||||||||||||||||||| || || ||
Sbjct 798 GATTTGGAGTTTCTGTTTGTTCTATGTCATGGCTGAGCTTTGGGGTAGTGTTGTTGTTTC 857
Query 860 AGTTCTCTTCTGGGGCTTTGCTAATCAGATCACAACTGTGGATGAAGCCAAGAAA-TTCT 918
||||||||||||||| ||||| |||||||| |||||||| || |||||||| ||| ||||
Sbjct 858 AGTTCTCTTCTGGGGATTTGCAAATCAGATTACAACTGTTGACGAAGCCAA-AAAGTTCT 916
Query 919 ATCCTTTGTTCGGACTTGGAGCCAATGTTGCACTGATTTTCTCAGGAAGAACCGTGAAAT 978
||||| |||| ||||| || |||||||||||||| ||||||||||||||||| |||||||
Sbjct 917 ATCCTCTGTTTGGACTAGGGGCCAATGTTGCACTTATTTTCTCAGGAAGAACTGTGAAAT 976
Query 979 ACTTCTCTAACT-TGAGAAAGAATCTTGGTCCTGGAGTTGACGGCTGGGCAGTTTCGTTG 1037
| |||||||| | |||||||||||||||||||||||||||| |||||||| ||||| |||
Sbjct 977 ATTTCTCTAA-TATGAGAAAGAATCTTGGTCCTGGAGTTGATGGCTGGGCTGTTTCATTG 1035
Query 1038 AAAGCCATGATGAGCATTGTGGTGGGAATGGGACTCGCCATTTGTCTCCTCTATTGGTGG 1097
|||||||||||||| ||||| ||||| ||||| |||||||| ||| ||||||| ||||||
Sbjct 1036 AAAGCCATGATGAGTATTGTCGTGGGGATGGGTCTCGCCATCTGTTTCCTCTACTGGTGG 1095
Query 1098 GTCAATAGATATGTTCCTCTTCCAACCCGTAGCAAGAACAAGAAGGAGAAACCGA-AGAT 1156
|| ||||||||||| || || ||||||||||||||||| ||||||| |||||| | ||||
Sbjct 1096 GTGAATAGATATGTGCCCCTCCCAACCCGTAGCAAGAAGAAGAAGGTGAAACC-ACAGAT 1154
Query 1157 GGGAACGATGGAAAGCTTGAAGTTCTTGGTATCATCACCATACATTAGAGATCTTGCTAC 1216
|||||| ||||| ||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 1155 GGGAACAATGGAGAGCTTGAAGTTCTTGGTGTCATCACCATACATTAGGGATCTTGCTAC 1214
Query 1217 TTTAGTGGTGGCATACGGTATTAGTATCAATCTTGTGGAAGTCACATGGAAATCAAAGCT 1276
||| ||||| ||||| || ||||||||||| || || |||||||||||||||||||||||
Sbjct 1215 TTTGGTGGTTGCATATGGAATTAGTATCAACCTCGTTGAAGTCACATGGAAATCAAAGCT 1274
Query 1277 TAAAGCTCAGTTCCCTAGCCCGAATGAGTACTCAGCATTTATGGGAGACTTCTCAACCTG 1336
||||||||||||||||||||| || || ||||||||||||||||| |||||||| |||||
Sbjct 1275 TAAAGCTCAGTTCCCTAGCCCAAACGAATACTCAGCATTTATGGGTGACTTCTCGACCTG 1334
Query 1337 CACGGGTGTTGCAACATTCACAATGATGCTTCTCAGCCAATACGTATTCAATAAGTATGG 1396
||||||| | ||||||||||||||||||||||| ||||| ||||| || || ||||||||
Sbjct 1335 CACGGGTATAGCAACATTCACAATGATGCTTCTAAGCCAGTACGTGTTTAAGAAGTATGG 1394
Query 1397 TTGGGGAGTAGCTGCAAAGATCACCCCAACTGTTCTGCTATTGACTGGTGTTGCGTTCTT 1456
|||||||||||||||||||||||| ||||| |||||||||||||| || ||||| |||||
Sbjct 1395 TTGGGGAGTAGCTGCAAAGATCACGCCAACCGTTCTGCTATTGACCGGCGTTGCCTTCTT 1454
Query 1457 CTCTCTAATATTGTTTGGCGGCCCATTCGCACCACTTGTTGCCAAGCTTGGTATGACACC 1516
|||||| ||| ||||||| || |||||||||||| | |||||||||||||||||||||||
Sbjct 1455 CTCTCTGATACTGTTTGGTGGTCCATTCGCACCAGTGGTTGCCAAGCTTGGTATGACACC 1514
Query 1517 GCTACTTGCAGCTGTGTATGTCGGTGCCCTTCAGAATATCTTCAGCAAGAGTGCCAAGTA 1576
|||||| |||||||||||||| |||||||| |||||||||||||||||||| ||||||||
Sbjct 1515 GCTACTCGCAGCTGTGTATGTTGGTGCCCTCCAGAATATCTTCAGCAAGAGCGCCAAGTA 1574
Query 1577 CAGCTTGTTCGACCCTTGCAAAGAAATGGCCTATATCCCATTGGATGAGGACACCAAGGT 1636
|||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct 1575 CAGCTTGTTCGATCCTTGCAAAGAAATGGCTTATATCCCATTGGACGAGGACACCAAGGT 1634
Query 1637 TAAAGGCAAAGCTGCGATTGACGTGGTCTGCAACCCATTAGGGAAATCAGGGGGAGCTTT 1696
||||||||||||||| ||||| ||||||||||||||||| ||||||||||| || |||||
Sbjct 1635 TAAAGGCAAAGCTGCAATTGATGTGGTCTGCAACCCATTGGGGAAATCAGGCGGTGCTTT 1694
Query 1697 AATACAGCAGTTCATGATC-TTATCCTTTGGATCACTAGCGAATTCAACGCCGTATCTAG 1755
||| ||||||||||||||| ||| | || || ||||| || ||||| || || || || |
Sbjct 1695 AATCCAGCAGTTCATGATCCTTA-CATTCGGCTCACTCGCCAATTCCACACCTTACCTTG 1753
Query 1756 GAATGATCTTGTT-GGTTATTGTCACTGCGTGGTTAGCTGCAGCTAAGTCGCTGGAGGGA 1814
|||| ||| || | ||| || |||||||| |||||||| |||||||||||||||||||||
Sbjct 1754 GAATCATCCTGCTCGGT-ATAGTCACTGCATGGTTAGCCGCAGCTAAGTCGCTGGAGGGA 1812
Query 1815 CAGTTCAACAGCT-TGCG-GTCTGAAGAAGAGCTTGAGAAGGAAATGGAGAGAGCTTCAT 1872
|||||||||| || | | |||||||||||||||||||||||||||||||||||||||||
Sbjct 1813 CAGTTCAACA-CTCT-CATGTCTGAAGAAGAGCTTGAGAAGGAAATGGAGAGAGCTTCAT 1870
Query 1873 CGGTGAAGATCCCTGTCGTGTCTCAGGA 1900
| || ||||| ||||| || ||||||||
Sbjct 1871 CAGTCAAGATTCCTGTTGTATCTCAGGA 1898
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 83265275570
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5