BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G01750.2
Length=2339
Score E
Sequences producing significant alignments: (Bits) Value
Ahg484092 jgi|Araly1|484092|fgenesh2_kg.5__84__AT2G01750.1 3393 0.0
Ahg471675 jgi|Araly1|471675|fgenesh2_kg.1__1629__AT1G14840.1 1666 0.0
Ahg475917 jgi|Araly1|475917|fgenesh2_kg.2__1047__AT1G68060.1 891 0.0
Ahg921711 jgi|Araly1|921711|scaffold_102992.1 841 0.0
Ahg472169 jgi|Araly1|472169|fgenesh2_kg.1__2123__AT1G14840.1 484 9e-136
> Ahg484092 jgi|Araly1|484092|fgenesh2_kg.5__84__AT2G01750.1
Length=2142
Score = 3393 bits (1837), Expect = 0.0
Identities = 2055/2158 (95%), Gaps = 24/2158 (1%)
Strand=Plus/Plus
Query 182 ATGGAGGAAGGTGGATATGCGTTTGAGGTTAACAATGGAAGACCAACGGCGAGTGAGTTT 241
||||||||||| |||||||||||||||||||| ||||||| |||||| ||||||||||||
Sbjct 1 ATGGAGGAAGGGGGATATGCGTTTGAGGTTAATAATGGAAAACCAACAGCGAGTGAGTTT 60
Query 242 GGTACGACGGCGAGGATTTCGTCACCGTCATTGACTATGTCATCGTCTTTCCGTGAAGGA 301
|||||||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct 61 GGTACGACGGCGAGGACTTCTTCACCGTCATTGACTATGTCATCGTCTTTCCGT------ 114
Query 302 GGAGGAGGAGGTGGAAGTAAGGGTTTAACACGACGGAGGTCAATGAAGCCGAGTTTTGAC 361
|| |||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 115 -GA--AGGA---GGAAGTAAGGGTTTAACGCGACGGAGGTCAATGAAGCCGAGTTTTGAC 168
Query 362 GCCGATAATGAGTTCATTACTTTACTCCATGGCTCAGATCCGGTTAAAGTTGAGCTTAAT 421
|| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 169 GCGGATAATGAGTTCATTACTTTACTCCATGGCTCAGATCCGGTTAAAATTGAGCTTAAT 228
Query 422 AGGCTTGAGAACGATGTCAGAGATAAAGATCGGGAGTTGTCTGAATCCCAAGCTGAGATC 481
||||||||||||||||||||||||||||||||||| || |||||| | ||||||||||||
Sbjct 229 AGGCTTGAGAACGATGTCAGAGATAAAGATCGGGAATTATCTGAAGCTCAAGCTGAGATC 288
Query 482 AAAGCATTGAGGTTGTCTGAACGGCAAAGAGAGAAGGCTGTTGAAGAGCTTACTGAAGAG 541
|| ||||||||||| |||||||| ||| |||||||||||||||||||| ||| |||||||
Sbjct 289 AAGGCATTGAGGTTATCTGAACGACAACGAGAGAAGGCTGTTGAAGAGGTTAGTGAAGAG 348
Query 542 TTGGGAAAGATGTCGGAGAAGCTCaaactaactgaaaaccttcttgacagtaaaaacctt 601
||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct 349 TTGGGAAAGATGTCGGAGAAGCTCAAACTGAGTGAAAACCTTCTTGACAGTAAAAACCTT 408
Query 602 gaaatcaagaaaataaacgaagaaaaaaGGGCTTCAATGGCAGCTCAATTTGCTGCAGAA 661
|||||||||||||| |||||||| ||||||||||| ||||||||||||||||| ||||||
Sbjct 409 GAAATCAAGAAAATTAACGAAGAGAAAAGGGCTTCCATGGCAGCTCAATTTGCCGCAGAA 468
Query 662 GCCACTCTTCGAAGGGTTCATGCTGCTCAAAAGGATGACGATATGCCTCCTATTGAAGCT 721
|||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 469 GCCACTCTGCGAAGAGTTCATGCTGCTCAAAAGGATGATGATATGCCTCCTATTGAAGCT 528
Query 722 ATTCTCGCTCCTTTAGAGGCTGAACTCAAGTTGGCGAGACATGAAATTGTTAAACTTCAA 781
|||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 529 ATTCTCGCCCCTTTAGAGGCTGAACTCAAGTTGGCGAGACATGAAATCATTAAACTTCAA 588
Query 782 GATGACAACAGAGCATTGGACCGTCTAACCAAGTCGAAGGAAGCAGCTTTGCTTGATGCT 841
|| |||||||||||||||||||| ||||| || || ||||||||||||||||||||||||
Sbjct 589 GACGACAACAGAGCATTGGACCGCCTAACTAAATCAAAGGAAGCAGCTTTGCTTGATGCT 648
Query 842 GAAAGAACTGTTCAGTCTGCTCTTGCAAAGGCTTCAATGGTTGATGACCTCCAGAATAAA 901
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 649 GAAAGAACTGTTCAGTCTGCTCTTGCGAAGGCTTCAATGGTTGATGACCTCCAGAATAAA 708
Query 902 AACCAAGAGCTAATGAAACAGATAGAAATTTGTCAGGAAGAGAACAGAATTTTGGACAAG 961
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 709 AACCAAGAGTTAATGAAACAGATAGAAATTTGTCAGGAAGAGAACAGAATTTTGGACAAG 768
Query 962 TTGCACAGACAAAAGGTTGCAGAAGTTGAAAAGTTTACCCAGACCGTACGGGAGCTTGAA 1021
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct 769 TTGCACAGACAAAAGGTTGCAGAAGTTGAAAAGTTTACCCAGACTGTACGAGAGCTTGAA 828
Query 1022 GAAGCTGTTCTTGCTGGTGGTACAGCTGCAAATGCAGTGAGAGATTACCAGAGGAAATTT 1081
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 829 GAAGCTGTTCTTGCTGGTGGTACAGCTGCAAATGCAGTGAGGGATTACCAGAGGAAATTC 888
Query 1082 CAAGAAATGAATGAAGAGAGGAGAATCCTTGATCGGGAACTGGCTCGTGCCAAAGTAAGT 1141
|||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct 889 CAAGAAATGAATGAAGAGAGGAGAGTCCTTGATCGGGAATTGGCTCGTGCCAAAGTAAGT 948
Query 1142 GCAAGCAGGGTTGCAACTGTAGTGGCAAATGAGTGGAAAGATGGTAGCGATAAAGTGATG 1201
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 949 GCAAGCAGGGTTGCAACTGTAGTGGCAAATGAGTGGAAAGATGGTAGCGACAAAGTGATG 1008
Query 1202 CCTGTGAAGCAATGGCTCGAAGAACGAAGATTTCTGCAGGGAGAAATGCAACAACTACGT 1261
|||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1009 CCTGTGAAACAATGGCTCGAAGAACGAAGATTTTTGCAGGGAGAAATGCAACAACTACGT 1068
Query 1262 GACAAACTTGCCATAGCTGATCGAGCTGCAAAATCTGAAGCTCAGCTAAAGGAGAAATTT 1321
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1069 GACAAACTTGCCATAGCTGATCGAGCTGCAAAATCTGAAGCTCAGCTGAAGGAGAAATTT 1128
Query 1322 CAACTGCGGCTTAGAGTCTTAGAAGAGAGTTTAAGAGGGCCTTCAAGCAGTGGAAACCGA 1381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1129 CAACTGCGGCTTAGAGTCTTAGAAGAGAGTTTAAGAGGGCCTTCAAGCAGTGGAAACCGA 1188
Query 1382 TCGACACCTGAGGGAAGAAGTATGAGCAACGGGCCTTCTCGAAGACAATCCCTTGGCGGA 1441
||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct 1189 TCGACGCCTGAGGGAAGAAGTATTAGCAATGGGCCTTCTCGAAGACAATCCCTTGGCGGA 1248
Query 1442 GCTGATATTATTCCGAAACTGACATCAAATGGATTTTTCTCCAAGAGGTCACCAAGTTCT 1501
|||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct 1249 GCTGATATTATTCCGAAACTGACATCAAATGGATTTTTCTCCAAGAGGACACCGAGTTCT 1308
Query 1502 CAGTTTAGATCTTTGAATGCTAGTACAAGCACAATATTGAAGCATGCGAAAGGAACATCC 1561
|||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 1309 CAGTTTAGATCTTTGAGTGCTAGTACAAGTACAATATTGAAGCATGCTAAAGGAACATCC 1368
Query 1562 AGATCATTTGACGGAGGCAGTAGATCTTTAGATAGGAGTAAAGTACTAACAAACGAACCC 1621
||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct 1369 AGATCATTTGACGGAGGGAGTAGATCTTTAGATAGGAGTAAACTACTAACAAACGAACCC 1428
Query 1622 AGATCGAAGTTTCCATTGAACCAATCTTCTGAAGGAACAAGCGGAGGCGGGTCACCTAAT 1681
||||||||||||||||||||||||| |||||||| |||||||||| ||| ||||||||||
Sbjct 1429 AGATCGAAGTTTCCATTGAACCAATGTTCTGAAGAAACAAGCGGAAGCGAGTCACCTAAT 1488
Query 1682 TCAACAAAACAAGGAGATTCAGAGAAAGCAGCAGGGACAAATAATGATAGTGTCCCAGGA 1741
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1489 TCAACAAAACAAGGAGATTCAGAGAAAGCAGCAGCGACAAATAATGATAGTGTCCCAGGA 1548
Query 1742 GTATTACATGATTTGCTTCAAAAGGAGGTGATAACTTTAAGGAAAGCTGCTAATGATAAA 1801
|||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 1549 GTATTACATGATTTGCTTCAAAAGGAGGTGATAACTTTAAGGAAAGCTTCTCATGATAAA 1608
Query 1802 GATCAAAGCCTTAGAGATAAAGACGAAGCTATTGAGATGTTGGCCAAGAAGGTTGAAACA 1861
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1609 GATCAAAGCCTTAGAGATAAAGACGAAGCTATTGAGATGTTGGCCAAGAAGGTTGAAACA 1668
Query 1862 CTAACAAAGGCGATGGAAGTGGAAGCAAAGAAGATGCGAAGAGAAGTAGCAGCAATGGAG 1921
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1669 CTAACAAAGGCGATGGAGGTGGAAGCAAAGAAGATGCGAAGAGAAGTAGCAGCAATGGAG 1728
Query 1922 AAAGAGGTTTCAGCTATGCGTGTGGATAACAAAGGATCAGATAGTAGAACGAGACGTCAC 1981
||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |
Sbjct 1729 AAAGAGGTTTCGGCTATGCGTGTGGATAATAAAGGATCAGATAGTAGAACGAGACGTCCC 1788
Query 1982 TCTACTAACTCAAAAGGAGCTTCAACAACTGCACAGTTACTTTCTGGAAGCAGAGGCTCA 2041
|||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||
Sbjct 1789 TCTACTAACTCAAAAGGAGCTTCAACAACTGCACAGTTACTTTCTGGAAG-AG-G-CTCA 1845
Query 2042 GGACGAATGGGGATGACGAGGAGCACGCAGTGATCAAAGAAGTCGATTCCACGAGCAAAA 2101
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1846 GGACGAATGGGGATGACGAGGAGCACACAGTGATCAAAGAAGTCGATTCCACGAGCAAAA 1905
Query 2102 TATGAATCTCAATTCAGTGGTTAATAGATTGAAGGAATGACAAAAAGCATACAAATATAG 2161
||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct 1906 TATGAATCTCAAT-CAGTGGTTAATAGAATGAAGGAATGACAAAAAGCATACAAATGTAG 1964
Query 2162 AAATCCAATATGGGAGGTTTGTGTGCTTCTT----AACATAGTAAGATTTCAAAGTTAAA 2217
||||||||||||||||||||||||||||||| |||||||||||||||||| || |||
Sbjct 1965 AAATCCAATATGGGAGGTTTGTGTGCTTCTTCTCTAACATAGTAAGATTTCAAGGTAAAA 2024
Query 2218 AACTGATTTTTAATTTCTTGGCTGAT--GTTTATTGTTTTCCTCATATATA--GAAAAGA 2273
|||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||
Sbjct 2025 AACTGATTTTTAATTTCTTGGCTGATATGTTTATTGTTTTCCTTATATATATAGAAAAGA 2084
Query 2274 GTTAGGTTTGTGTTTTAACTACTAACTTGAGCTTAGTGTGTGATTTATTGTATCTCTC 2331
|||||||||||||||| ||||| || ||||||||||||||||||||||| ||||||||
Sbjct 2085 GTTAGGTTTGTGTTTTTACTACCAATTTGAGCTTAGTGTGTGATTTATTTTATCTCTC 2142
> Ahg471675 jgi|Araly1|471675|fgenesh2_kg.1__1629__AT1G14840.1
Length=2187
Score = 1666 bits (902), Expect = 0.0
Identities = 1512/1801 (84%), Gaps = 64/1801 (4%)
Strand=Plus/Plus
Query 306 GAGGAGGTGGAAGTAAGGGTTTAACACGACGGAGGTCAATGAAG-CCGAGTTTTGACGCC 364
||| ||| ||||| ||||| ||| ||||||||||||| ||| || || || ||||||||
Sbjct 130 GAGAAGGAGGAAGCAAGGGCTTATCACGACGGAGGTCGATG-AGACCAAGCTTTGACGCG 188
Query 365 GATAATGAGTTCAT-TACTTTACTCCATGGCTCAGATCCGGTTA-AAGTTGAGCTT-AAT 421
||||| |||||||| || || || |||||||||||||| || | || ||||| || |||
Sbjct 189 GATAACGAGTTCATGAACCTT-CTACATGGCTCAGATCCCGTGAGAA-TTGAG-TTAAAT 245
Query 422 AGGCTTGAGAACGATGTCAGAGATAAAGATCGGGAGTTGTCTGAATCCCAAGCTGAGATC 481
|||| ||||| || ||||||||||| ||| |||| || |||||| |||||||| |||
Sbjct 246 CGGCTGGAGAATGAAGTCAGAGATAAGGATAGGGAATTATCTGAAGGACAAGCTGAAATC 305
Query 482 AAAGCATTGAGGTTGTCTGAACGGCAAAGAGAGAAGGCTGTTGAAGAGCTTACTGAAGAG 541
||||| |||||||||||||| || |||||||||||||||||||||||||| |||||||||
Sbjct 306 AAAGCTTTGAGGTTGTCTGAGCGACAAAGAGAGAAGGCTGTTGAAGAGCTCACTGAAGAG 365
Query 542 TTGGGAAAGATGTCGGAGAAGCTCaaactaactgaaaaccttcttgacagtaaaaacctt 601
|||||||||||| |||| || |||||||| | |||||| |||||||| ||||||||||||
Sbjct 366 TTGGGAAAGATGGCGGAAAAACTCAAACTGATTGAAAATCTTCTTGAGAGTAAAAACCTT 425
Query 602 gaaatcaagaaaataaacgaagaaaa-aaGGGCTTCAATGGCAGCTCAATTTGCTGCAGA 660
|||||||||| ||||| |||||||| || |||||| ||||||||||| ||||| |||||
Sbjct 426 GAAATCAAGATGATAAATGAAGAAAAGAA-GGCTTCCATGGCAGCTCAGTTTGCAGCAGA 484
Query 661 AGCCACTCTTCGAAGGGTTCATGCTGCTCAAAAGGATGACGATATGCCTCCTATTGAAGC 720
|||| ||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 485 AGCCTCTCTTCGTAGGGTTCATGCTGCTCAAAAGGATGATGATATGCCTCCAATTGAAGC 544
Query 721 TATTCTCGCTCCTTTAGAGGCTGAACTCAAG-TTGGCGAGACAT-GAAATTGTTAAACTT 778
|||||| || |||||||| |||||||| ||| || || |||| | ||||||| |||||||
Sbjct 545 TATTCTTGCCCCTTTAGAAGCTGAACTGAAGCTT-GCCAGAC-TAGAAATTGCTAAACTT 602
Query 779 CAAGATGACAACAGAGCATTGGACCGTCTAACCAAGTCGAAGGAAGCAGCTTTGCTTGAT 838
||||| ||||||||| |||||||||| |||||||| || ||||||||||||||||||||
Sbjct 603 CAAGACGACAACAGATCATTGGACCGCCTAACCAAATCAAAGGAAGCAGCTTTGCTTGAC 662
Query 839 GCTGAAAGAACTGTTCAGTCTGCTCTT-GCAAAGGCTTCAATGGTTGATGACCTCCAGAA 897
|||||||| || ||||||||||| || ||||||||||||||||||||||| ||||||||
Sbjct 663 GCTGAAAGGACAGTTCAGTCTGC-ATTGGCAAAGGCTTCAATGGTTGATGATCTCCAGAA 721
Query 898 TAAAAACCAAGAGCTAATGAAACAGATAGAAATTTGTCAGGAAGAGAACAGAATTTTGGA 957
||| || ||||| | ||||||||||| ||||||||||||||||| || |||||| | ||
Sbjct 722 TAAGAATCAAGAATTGATGAAACAGATTGAAATTTGTCAGGAAGAAAATAGAATTATAGA 781
Query 958 CAAGTTGCACAGACAAAAGGTTGCAGAAGTTGAAAAGTTTACCCAGACCGTACGGGAGCT 1017
|||| |||||||||| |||||||||||||||||||| ||| |||| || || ||| |
Sbjct 782 CAAGATGCACAGACAGAAGGTTGCAGAAGTTGAAAAACTTATGCAGAGTGTGCGAGAG-T 840
Query 1018 T-GAAGAAGCTGTTCTTGCTGGTGGTACAGCTGCAAATGCAGTGAGAGATTACCAGAGGA 1076
| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct 841 TAGAAGAAGCTGTTCTTGCTGGTGGTGCAGCCGCAAATGCAGTGAGAGATTACCAGAGGA 900
Query 1077 AATTTCAAGAAATGAATGAAGAGAGGAGAATCCTTGATCGGGAACTGGCTCGTGCCAAAG 1136
|||||||||||||||||||||| |||| ||| ||||| |||||| |||| ||||| ||||
Sbjct 901 AATTTCAAGAAATGAATGAAGAAAGGAAAATTCTTGAACGGGAATTGGCCCGTGC-AAAG 959
Query 1137 -TAAGTGCAAGCAGGGTTGCAACTGTAGTGGCAAATGAGTGGAAAGATGGTAGCGATAAA 1195
||| ||||| ||| ||||| ||||| || ||||| || ||||||||| || || |||
Sbjct 960 GTAAATGCAAACAGAGTTGCTACTGTTGTAGCAAACGAATGGAAAGATTCTAATGACAAA 1019
Query 1196 GTGATGCCTGTGAAG-CAATGGCTCGAAGAACGAAGATTTCTGCAGGGAGAAATGCAACA 1254
||||||||||| ||| || ||||| |||||||| |||||||||||||||||||||||||
Sbjct 1020 GTGATGCCTGT-AAGGCAGTGGCTTGAAGAACGTCGATTTCTGCAGGGAGAAATGCAACA 1078
Query 1255 ACTACGTGACAAACTTGCCATAGCTGATCGAGCTGCAAAATCTGAAGCTCAGCTAAAGGA 1314
|||||| |||||||||||||||||||| ||||||||||||||||||||||| || |||||
Sbjct 1079 ACTACGCGACAAACTTGCCATAGCTGACCGAGCTGCAAAATCTGAAGCTCATCTGAAGGA 1138
Query 1315 GAAATTTCAACTGCGGCTTAGAGTCTTAGAAGAGAGTTTAAGAGGG-CCTTCAAGCAGTG 1373
|||||||| ||||||||||||||| |||||||||||||||| |||| ||| |||||||
Sbjct 1139 GAAATTTCTACTGCGGCTTAGAGTGTTAGAAGAGAGTTTAA-AGGGGCCTGCAAGCAGCA 1197
Query 1374 GAAACCGAT-CGACA-CCTGAGGGAAGAAG-TATGAGCAACGGGCCTTCTCGAAGACAAT 1430
| | | || | ||| || | || ||||| | ||||||||||||||||||||||||||
Sbjct 1198 GCAGCAGAGGC-ACATCC-GTTGGTAGAAGCTC-GAGCAACGGGCCTTCTCGAAGACAAT 1254
Query 1431 CCCTTGGCGGAGCTGATATTATTCCGAAACTGACATCAAATGGATTTTTC-TCCAAGAGG 1489
||||||| |||||||| | | ||| ||| | ||||||||||| | || | |||||
Sbjct 1255 CCCTTGGTGGAGCTGAAACAAGTCCAAAAATTACATCAAATGGCTCGTTGATT-AAGAGA 1313
Query 1490 TCACCAAGTTCTCAGTTTAGATCTTTGAATGCTAGTACAAGCACAATATTGAAGCATGCG 1549
|||||||||||||||||||||| |||| ||||||| ||||||| |||||||||||||
Sbjct 1314 ACACCAAGTTCTCAGTTTAGATCATTGACTGCTAGTGCAAGCACTGTATTGAAGCATGCA 1373
Query 1550 AAAGGAACATCCAGATCATTTGACGGAGGCAGTAGATCTTTAGATAGGAGTAAAGTACTA 1609
||||||||||| ||||||||||| || || | |||| || ||||| || ||||| |||
Sbjct 1374 AAAGGAACATCAAGATCATTTGATGGGGGAACCCGATCATTGGATAGAAGCAAAGTGCTA 1433
Query 1610 ACAAACGAACCCAGATCGAAGTTTCCATTGAACCA--A-TCTTCTGAAGGAACAAGCGGA 1666
| ||| | ||| ||||| || ||||| |||||||| | |||||||||||||| ||| ||
Sbjct 1434 ATAAATGGACCGAGATCAAATTTTCCTTTGAACCACCAGTCTTCTGAAGGAACTAGCAGA 1493
Query 1667 GGCGGGTCACCTAATTCAACAAAAC--AAGGA-GATTCAGA-GA-AAGCAGCAGGGACAA 1721
|||| | | |||| ||| |||| || || || ||||| || ||| || ||||
Sbjct 1494 GGCGAGACGCCTAGCTCAGTAAAAGGGAAAGAAGAATCAGATGACAAGT--CA---ACAA 1548
Query 1722 ATAATGATAGTGTCCCAGGAGTATTACATGATTTGCTTCA-AAAGGAGGTGATAACTTTA 1780
||||||||||||||||||| || || |||||||||| || |||| |||| || || |||
Sbjct 1549 ATAATGATAGTGTCCCAGGTGTCTTGTATGATTTGCTGCAGAAAG-AGGTCATTACATTA 1607
Query 1781 AGGAAAGCTGCTAATGATAAAGATCAAAGCCTTAGAGATAAAGACGAAGCTATTGAGATG 1840
|| |||||||| |||| |||||||| ||||| ||||| || ||||||||||||||||||
Sbjct 1608 AGAAAAGCTGCGCATGAAAAAGATCAGAGCCTGAGAGACAAGGACGAAGCTATTGAGATG 1667
Query 1841 TTGGCCAAGAAGGTTGAAACACTAACAAAGGCGATGGAAGTGGAAGCAAAGAAGATGCGA 1900
||||||||||||||||||||| | ||||| |||||||| || || |||||||||||||||
Sbjct 1668 TTGGCCAAGAAGGTTGAAACATTGACAAAAGCGATGGACGTTGAGGCAAAGAAGATGCGA 1727
Query 1901 AGAGAAGTAGCAGCAATGGAGAAAGAGGTTTCAGCTATGCGTGTGGATAACAA-AGGATC 1959
||||||||||| | ||||| |||||| ||| | || |||||||| ||||| | | | |
Sbjct 1728 AGAGAAGTAGCTGTAATGGGGAAAGAAGTTGCTGCAATGCGTGTTGATAA-AGGACAA-C 1785
Query 1960 A-GATAGTAGAACGAGACGTCACTCTACTAACTCAAAAGGAGCTTCAACAACTGCACAGT 2018
| ||||||| ||| ||||||| ||| | | |||||| ||| |||| |||| ||
Sbjct 1786 AAGATAGTAAAACCAGACGTCTCTC-AGT--CTCAAAGGGA-----AACA-CTGCTCAAC 1836
Query 2019 TACTTTCTGGAAGCAGAGGCTCAGGACGAATGGGGATGACGAGGAGCACGCAGTGATCAA 2078
| ||||||||||| || | || |||||||| ||||||||||||||||| |||||| |||
Sbjct 1837 TGCTTTCTGGAAG-AGTGTCT--GGACGAATTGGGATGACGAGGAGCACACAGTGA-CAA 1892
Query 2079 A 2079
|
Sbjct 1893 A 1893
> Ahg475917 jgi|Araly1|475917|fgenesh2_kg.2__1047__AT1G68060.1
Length=2517
Score = 891 bits (482), Expect = 0.0
Identities = 1268/1637 (77%), Gaps = 96/1637 (6%)
Strand=Plus/Plus
Query 365 GATAATGAGTTCATTACTTTACTCCATGGCTCAGATCCGGTTAAAGTTGAGCTTAATAGG 424
||||||||||| |||||||| || ||||| || ||||| || ||||||||||||||| ||
Sbjct 415 GATAATGAGTTTATTACTTTGCTTCATGGTTCGGATCCAGTGAAAGTTGAGCTTAATCGG 474
Query 425 CTTGAGAACGATGTCAGAGATAAAGATCGGGAGTTGTCTGAATCCCAAGCTGAGATCAAA 484
|||||||| || || |||||||| ||||| || || |||| | || ||||||||||||
Sbjct 475 CTTGAGAATGAAGTTAGAGATAAGGATCGAGAATTAAGTGAAGCACATGCTGAGATCAAA 534
Query 485 GCATTGAGGTTGTCTGA-ACGGCAAAGAGAGAAGGC-TGTTGAAGAGCTTACTGAAGAG- 541
|| |||||||| ||||| | ||||||||||||| || || ||||||||||||||| |||
Sbjct 535 GCGTTGAGGTTATCTGAGA-GGCAAAGAGAGAAAGCTTG-TGAAGAGCTTACTGATGAGC 592
Query 542 TTGGGAAAGAT-G-TCGGAGAAGCTCaaactaactgaaaac-cttcttgacagtaaaaac 598
|| | ||| | | | || ||||||||| | |||| || | ||||| | || |||||
Sbjct 593 TT-GCTAAGTTGGAT-GG-GAAGCTCAAGTTGACTG-AATCGCTTCTCCAAAGCAAAAAT 648
Query 599 cttgaaatcaagaaaataaacgaagaaaa-aaGGGCTTCAATGGCAGCTCAATTTGCTGC 657
|| ||||| ||||| || || || ||||| || |||||| ||||| ||||| ||||||||
Sbjct 649 CTAGAAATTAAGAAGATCAATGAGGAAAAGAA-GGCTTCCATGGCTGCTCAGTTTGCTGC 707
Query 658 AGAAGCCACTCTT-CGAAGGGTTCATGCTGCTCAAAAGGATGACGATATGCCTCCTATTG 716
||||| || ||| ||||||| |||||||||||||||||||| ||||||||||| ||||
Sbjct 708 TGAAGCTAC-CTTAAGAAGGGTCCATGCTGCTCAAAAGGATGATGATATGCCTCCGATTG 766
Query 717 AAGCTATTCTCGCTCCTTTAGAGGCTGAACTCAAGTTGGCGAGAC-ATGAAATTGTTAAA 775
|||| ||||| || || ||||| |||||||| ||| | || | | ||| |||| ||
Sbjct 767 AAGCCATTCTAGCCCCGTTAGAAGCTGAACTTAAGCTAGCTCG-CTCTGAGATTGGGAAG 825
Query 776 CTTCAAGATGACAACAGAGCATTGGACCGTCTAACCAAGTCGAAGGAAGCAGCTTTGCTT 835
|||||||| || |||||||| ||||| ||||| || || || || ||||| || ||||||
Sbjct 826 CTTCAAGAAGATAACAGAGCCTTGGATCGTCTCACTAAATCAAAAGAAGCGGCCTTGCTT 885
Query 836 GATGCTGAAAGAACTGTTCAGTCTGCTCTTGCAAAGGCTTCAATGGTTGATGACCTCCAG 895
|||||||| || |||||| | |||||| ||||| ||| | | |||||||| || ||
Sbjct 886 GATGCTGAGAGGACTGTTGAAAGTGCTCTGGCAAAAGCTGCTTTAGTTGATGATCTTCAA 945
Query 896 AATAAAAACCAAGAGCTAATGAAACAGATAGAAATTTGTCAGGAAGAGAACAGAATTTTG 955
||||| ||||||||| | |||||||| |||||||| ||||||||||| |||| |||| |
Sbjct 946 AATAAGAACCAAGAGTTGATGAAACAAATAGAAATCTGTCAGGAAGAAAACAAAATTCTA 1005
Query 956 GA-C-AAGTTGCACAGACAAAAGGTTGCAGAAGTTGAAAAGTTTACCCAGACCGTACGGG 1013
|| | || ||||||| ||||||||||| || || |||||| |||| ||||| ||||| |
Sbjct 1006 GACCGAA--TGCACAGGCAAAAGGTTGCTGAGGTGGAAAAGCTTACTCAGACTGTACGTG 1063
Query 1014 AGCTTGAAGAAGCTGTTCTTGCTGGTGGTA-CAGCTGCAAATGCAGTGAGAGATTACCAG 1072
|||| ||||| || ||||||||||| || | | ||||||||||| ||||| |||||||||
Sbjct 1064 AGCTGGAAGAGGCCGTTCTTGCTGGCGG-AGCTGCTGCAAATGCCGTGAGGGATTACCAG 1122
Query 1073 AGGAAATTTCAAGAAATGAATGAAGAGAGGAGAATC-CTTGATCGGGAACTGGCTCGTGC 1131
|||| |||||||| ||||| ||||| | || || | ||||| |||||||| || ||||
Sbjct 1123 CGGAAGTTTCAAGAGATGAACGAAGA-ACGAAAAACTCTTGACCGGGAACTTGCGCGTG- 1180
Query 1132 CAAA-GTAAGTGCAAGCAGGGTTGCAACTGTAGTGGCAAATGAGTGGAAAGATGGTAGCG 1190
|||| || | |||| ||| ||||| || || || |||||||| ||||||||||||| |
Sbjct 1181 CAAAGGTTACAGCAAACAGAGTTGCGACGGTGGTTGCAAATGAATGGAAAGATGGTAATG 1240
Query 1191 ATAAAGTGATGCCTGTGAAGCAATGGCTCGAAGAACGAAGATTTCTGCAGGGAGAAATGC 1250
|||||||||||||||||||||||||||| |||||| |||| ||||| |||||||||||||
Sbjct 1241 ATAAAGTGATGCCTGTGAAGCAATGGCTTGAAGAAAGAAGGTTTCTACAGGGAGAAATGC 1300
Query 1251 AACAACTACGTGACAAACTTGCCATAGCTGATCGAGCTGCAAAATCTGAAGCTCAGCTAA 1310
| ||||| || || || ||||||||| | ||||||||||| ||||||||||| || ||||
Sbjct 1301 AGCAACTCCGCGATAAGCTTGCCATATCAGATCGAGCTGCGAAATCTGAAGCACAACTAA 1360
Query 1311 AGGAGAAATTTCAACTGCGGCTTAGAGT-CTTAGAAGAGAGTTTAAGAGGG-CCTTCAAG 1368
| || || |||||||| || |||| ||| ||| ||||||| | ||||| ||| ||||
Sbjct 1361 AAGACAAGTTTCAACTACGACTTAAAGTGCTT-GAAGAGACACTGAGAGGCACCT-CAAG 1418
Query 1369 CAGTG-G-A-AACCGATCGACACCTGAGGGAAGAAGTATGAGCAACGGGCCTTCTCGAAG 1425
|| | | | || || | ||||||||||||||||| ||||| || || || ||||| ||
Sbjct 1419 CA-TCAGCATAAG-GAGC-ACACCTGAGGGAAGAAGCATGAGTAATGGACCGTCTCGCAG 1475
Query 1426 ACAATCCCTTGGCGGAGCTGATATTATTCCGAAACT--GACATCAAATGGATTTTTCTCC 1483
|| || | || ||| | |||| | || | ||| | | |||||||||| ||||| ||
Sbjct 1476 GCAGTCAATCGGTGGATCAGATAAT-TTACAAAAGTTCG-CATCAAATGGCTTTTTGTCA 1533
Query 1484 AAGAGGTCACCAAGTTCTCAGTTTAGA--T-C-TTTGAATGCTAGTACAAGCACAATATT 1539
|||| | || | | | | | ||| | | ||| ||| ||| | | | | | ||||
Sbjct 1534 AAGA----A--AACT-C-C-GATGAGAAATTCCTTT-AATTCTAATTCCACCTCGGTATT 1583
Query 1540 GAAGCATGCGAAAGGAACATCCA-GATCATTTGACGGAGGCAGTAGATCTTTAGATAGGA 1598
|||| |||| ||||||||||||| | |||||||| ||||||| ||||| || ||||| |
Sbjct 1584 GAAGAATGCTAAAGGAACATCCAAG-TCATTTGATGGAGGCACAAGATCATTGGATAG-A 1641
Query 1599 GT-AAAGTACTAACAAACGAACCCAGATCGAAGT-TTCCATTGAACCA-ATCTTCTGAAG 1655
| |||| ||| ||||| ||| || || | ||| || ||| | | ||| ||| |
Sbjct 1642 GGCAAAGCACTCTTAAACGGACCTGGA---AATTATTCG-TTCAACAAGA-CTTGTGATG 1696
Query 1656 GAAC-AAGCGGAGGCGG-GTCACCTAATTCAACAAAACAAGGAGATTCAGA-GA-AAGC- 1710
||| || | | | | |||||||||| | | | ||| ||||||||| || ||||
Sbjct 1697 AAACCAAA-GAAT-CAGAGTCACCTAATAC--CTGGA-AAGAAGATTCAGAAGAGAAGCC 1751
Query 1711 AGCA-G-G--------G-AC-A--AA-T-AATGATAGTGTCCCAGGAGTATTACATGATT 1754
| || | | | || | || | || || | ||||||||| || || ||||||
Sbjct 1752 ACCAAGTGAACTCCCTGCACCAGCAACTGAA-GACAATGTCCCAGGGGTTTTGTATGATT 1810
Query 1755 TGCTTCAAAAGGAGGT-GATAACTTTAAGGAAAGCTGCTAATGATAAAGATCAAAGCCTT 1813
| || || ||||| || | || | || || ||| || | |||| || |||||||||||
Sbjct 1811 TACTACAGAAGGAAGTAG-TAGCCTTGAGAAAATCTTCGCATGAGAAGGATCAAAGCCTC 1869
Query 1814 AGAGATAAAGACGAAGCTATTGAGATGTTGGCCAAGAAGGTTGAAACACTAACAAAGGCG 1873
| ||| || || || || || |||||||| || || ||||||||||| ||||||||||
Sbjct 1870 AAAGACAAGGATGATGCCATAGAGATGTTAGCAAAAAAGGTTGAAACTTTAACAAAGGCA 1929
Query 1874 ATGGAAGTGGAAGCAAAGAAGATGCGAAGAGAAGTAGCAGCAATGGAGAAAGAGGTTTCA 1933
||||| || ||||| ||||||||| |||| |||||||| |||||||||||||||||| |
Sbjct 1930 ATGGAGGTTGAAGCGAAGAAGATGAGAAGGGAAGTAGCTGCAATGGAGAAAGAGGTTGCT 1989
Query 1934 GCTATGCGTGTGGATAA 1950
|| ||||||||||||||
Sbjct 1990 GCAATGCGTGTGGATAA 2006
> Ahg921711 jgi|Araly1|921711|scaffold_102992.1
Length=1945
Score = 841 bits (455), Expect = 0.0
Identities = 894/1103 (81%), Gaps = 42/1103 (4%)
Strand=Plus/Plus
Query 365 GATAATGAGTTCATTACTTTACTCCATGGCTCAGATCCGGTTAAAGTTGAGCTTAATAGG 424
||||||||||| |||||||| || ||||| || ||||| || ||||| ||||||||| |
Sbjct 207 GATAATGAGTTTATTACTTTGCTTCATGGTTCGGATCCAGTGAAAGTGGAGCTTAATCGA 266
Query 425 CTTGAGAACGATGTCAGAGATAAAGATCGGGAGTTGTCTGAATCCCAAGCTGAGATCAAA 484
|| ||||| || || |||||||| |||||||||||| ||| | || ||||||||||||
Sbjct 267 CTAGAGAATGAAGTTAGAGATAAGGATCGGGAGTTGGGAGAAGCACACGCTGAGATCAAA 326
Query 485 GC-ATTGAGGTTGTCTGA-ACGGCAAAGAGAGAAGGCTGTTGAAGAGCTTACTGAAGAGT 542
|| || ||||||||||| | | ||||||||||| |||||||||||||||||||| |||
Sbjct 327 GCGCTT-AGGTTGTCTGAGA-GACAAAGAGAGAAAGCTGTTGAAGAGCTTACTGAGGAG- 383
Query 543 TG-GGAAAGATGTCGGAGAAGCTCaaactaactgaaaacc-ttcttgacagtaaaaacct 600
| | ||| || ||||||||||| | || | || || |||| || || ||||| ||
Sbjct 384 CGTGCTAAGTTGGATGAGAAGCTCAAGTTGACCG-AATCCATTCTCGAAAGCAAAAATCT 442
Query 601 tgaaatcaagaaaataaacgaagaaaa-aaGGGCTTCAATGGCAGCTCAATTTGCTGCAG 659
|||||||||||||| || || ||||| || ||| |||||||| ||||| ||||||| |
Sbjct 443 AGAAATCAAGAAAATCAATGAGGAAAAGAA-GGCATCAATGGCTGCTCAGTTTGCTGTTG 501
Query 660 AAGCCACTCTT-CGAAGGGTTCATGCTGCTCAAAAGGATGACGATATGCCTCCTATTGAA 718
||||||| ||| ||||||| |||||||||||||||||||| || |||||||| ||||||
Sbjct 502 AAGCCAC-CTTAAGAAGGGTCCATGCTGCTCAAAAGGATGATGACATGCCTCCGATTGAA 560
Query 719 GCTATTCTCGCTCCTTTAGAGGCTGAACTCAAG-TTGGCGA-GA-CATGAAATTGTTAAA 775
|| || || ||||| ||||| |||||||| ||| || || | || || || |||| |||
Sbjct 561 GCCATCCTTGCTCCATTAGAAGCTGAACTTAAGCTT-GC-ACGATCA-GAGATTG-GAAA 616
Query 776 -CTTCAAGATGACAACAGAGCATTGGACCGTCTAACCAAGTCGAAGGAAGCAGCTTTGCT 834
|||||||| || ||||| || ||||||||||| || || || |||||||| || || ||
Sbjct 617 GCTTCAAGAAGATAACAGGGCTTTGGACCGTCTGACTAAATCAAAGGAAGCTGCCTTACT 676
Query 835 TGATGCTGAAAGAACTGTT-CAGTCTGCTC-TTGCAAAGGCTTCAATGGTTGATGACCTC 892
||| ||||| || || ||| || |||| | | ||||| || | ||||||||||| ||
Sbjct 677 TGAAGCTGAGAGGACCGTTGAAG-CTGC-CATGGCAAAAGCCGCCATGGTTGATGATCTT 734
Query 893 CAGAATAAAAACCAAGAGCTAATGAAACAGATAGAAATTTGTCAGGAAGAGAACAGAATT 952
|| ||||| ||||| ||||| |||||||| |||||||| ||||||||||| |||| ||||
Sbjct 735 CAAAATAAGAACCAGGAGCTTATGAAACAAATAGAAATCTGTCAGGAAGAAAACAAAATT 794
Query 953 TTGGACAAG-TTGCACAGACAAAAGGTTGCAGAAGTTGAAAAGTTTACCCAGACCGTACG 1011
| ||| || ||||||| || |||||||| ||||| |||||| |||| ||||| |||||
Sbjct 795 CTAGAC-AGAATGCACAGGCAGAAGGTTGCTGAAGTGGAAAAGCTTACTCAGACAGTACG 853
Query 1012 GGAGCTTGAAGAAGCTGTTCTTGCTGGTGGTACAGCTGCAAATGCAGTGAGAGATTACCA 1071
||||| ||||| ||||||||||| |||||| | ||||||||||| ||||| || |||||
Sbjct 854 AGAGCTGGAAGAGGCTGTTCTTGCAGGTGGTGCTGCTGCAAATGCCGTGAGGGACTACCA 913
Query 1072 GAGGAAATTTCAAGAAATGAATGAAGAGA-GGAGAATC-CTTGATCGGGAACTGGCTCGT 1129
| ||||||||||||| ||||||||||| | ||| || | ||||||||||| || || |||
Sbjct 914 GCGGAAATTTCAAGAGATGAATGAAGA-ACGGA-AAACTCTTGATCGGGAGCTTGCACGT 971
Query 1130 GCCAAA-GTAAGTGCAAGCAGGGTTGCAACTGTAGTGGCAAATGAGTGGAAAGATGGTAG 1188
| |||| || | |||| ||| ||||| ||||| || ||||||||||||||||||||||
Sbjct 972 G-CAAAGGTTACAGCAAACAGAGTTGCCACTGTGGTAGCAAATGAGTGGAAAGATGGTAA 1030
Query 1189 CGATAAAGTGATGCCTGTGAAGCAATGGCTCGAAGAACGAAGATTTCTGCAGGGAGAAAT 1248
||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 1031 TGATAAAGTGATGCCTGTGAAGCAATGGCTCGAAGAACGAAGGTTTCTACAGGGAGAAAT 1090
Query 1249 GCAACAACTACGTGACAAACTTGCCATAGCTGATCGAGCTGCAAAATCTGAAGCTCAGCT 1308
||| ||||| ||||| || || |||||| | || |||||||| ||||| || || ||| |
Sbjct 1091 GCAGCAACTTCGTGATAAGCTCGCCATAACAGACCGAGCTGCTAAATCCGAGGCACAGTT 1150
Query 1309 AAAGGAGAAA-TTTCAACTGCGGCTTAGAGT-CTT-AGAAGAGAGTTTAAGAGGGCCTTC 1365
||| || ||| |||||||||||||||| ||| ||| || ||| | || |||| ||||
Sbjct 1151 AAAAGA-AAAGTTTCAACTGCGGCTTAAAGTGCTTGAGGAGACACTTC--GAGGAACTTC 1207
Query 1366 AAGCAGTGGAAACC-G-ATCGACACCTGAGGGAAGAAGTATGAGCAACGGGCCTTCTCGA 1423
|||||| | | || | | | ||||| |||| |||||| ||||| || || ||||||||
Sbjct 1208 AAGCAGCAGCA-CCAGGAAC-ACACCCGAGGCAAGAAGCATGAGTAATGGACCTTCTCGC 1265
Query 1424 AGACAATCCCTTGGCGGAGCTGA 1446
|| || || ||||| ||||||||
Sbjct 1266 AGGCAGTCGCTTGGTGGAGCTGA 1288
> Ahg472169 jgi|Araly1|472169|fgenesh2_kg.1__2123__AT1G14840.1
Length=2111
Score = 484 bits (262), Expect = 9e-136
Identities = 384/443 (87%), Gaps = 8/443 (2%)
Strand=Plus/Plus
Query 767 ATTGTTAAACTTCAAGATGACAACAGAGCATTGGACCGTCTAACCAAGTCGAAGGAAGCA 826
|||| |||||||||||| ||||||| | ||||||||| |||||||| || |||||||||
Sbjct 611 ATTGCTAAACTTCAAGACGACAACAAATCATTGGACCACCTAACCAAATCAAAGGAAGCA 670
Query 827 GCTTTGCTTGATGCTG-AAAGAACTGTTCAGTCTGCTCTT-GCAAAGGCTTCAATGGTTG 884
||||||||||| | || |||| || ||||||||||| || |||||||||||||||||||
Sbjct 671 GCTTTGCTTGACGTTGAAAAG-ACAGTTCAGTCTGC-ATTGGCAAAGGCTTCAATGGTTG 728
Query 885 ATGACCTCCAGAATAAAAACCAAGAGCTAATGAAACAGATAGAAATTTGTCAGGAAGAGA 944
|||||||||||||||| |||||||| | |||||||| || |||||||||||||||||||
Sbjct 729 ATGACCTCCAGAATAAGAACCAAGAATTGATGAAACAAATTGAAATTTGTCAGGAAGAGA 788
Query 945 ACAGAATTTTGGACAAGTTGCACAGACAAAAGGTTGCAGAAGTTGAAAAGTTTACCCAGA 1004
| | |||| | |||||| |||||||||| ||||||||||||||||||||| ||| ||||
Sbjct 789 ATAAAATTATAGACAAGATGCACAGACAGAAGGTTGCAGAAGTTGAAAAGCTTATGCAGA 848
Query 1005 CCGTACGGGAGCTT-GAAGAAGCTGTTCTTGCTGGTGGTACAGCTGCAAATGCAGTGAGA 1063
|| |||||| || |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 849 GTGTGCGGGAG-TTAGAAGAAGCTGTTCTTGCTGGTGGTGCAGCTGCAAATGCAGTGAGA 907
Query 1064 GATTACCAGAGGAAATTTCAAGAAATGAATGAAGAGAGGAGAA-TCCTTGATCGGGAACT 1122
|||||||||||||||||||||||||||||||||||||||| || || |||| |||||| |
Sbjct 908 GATTACCAGAGGAAATTTCAAGAAATGAATGAAGAGAGGAAAAATC-TTGAACGGGAATT 966
Query 1123 GGCTCGTGCCAAAGTAAGTGCAAGCAGGGTTGCAACTGTAGTGGCAAATGAGTGGAAAGA 1182
||| ||||| || |||| ||||| || ||||| ||||| || ||||| || ||||||||
Sbjct 967 GGCCCGTGCGAAGGTAAATGCAAATAGAGTTGCTACTGTTGTAGCAAACGAATGGAAAGA 1026
Query 1183 TGGTAGCGATAAAGTGATGCCTG 1205
| || || |||||||||||||
Sbjct 1027 TACTAATGACAAAGTGATGCCTG 1049
Score = 481 bits (260), Expect = 1e-134
Identities = 629/798 (79%), Gaps = 62/798 (8%)
Strand=Plus/Plus
Query 1312 GGAGAAATTTCAACTGCGGCTTAGAGTCTTAGAAGAGAGTTT-AAGAGGGCCTTCAAGCA 1370
||||||| ||| ||||| ||||||||| |||||||||||||| ||| |||||| ||||||
Sbjct 1073 GGAGAAA-TTCTACTGCTGCTTAGAGTGTTAGAAGAGAGTTTAAAG-GGGCCTACAAGCA 1130
Query 1371 GTGGAAACCGATCG-ACA-CCTGAGGGAAGAAGTAT-GAGCAACGGGCCTTCTCGAAGAC 1427
| | | || | ||| || | || |||||| | |||||||||||||||||||||||
Sbjct 1131 GCAGCAGTAGA-GGCACATCC-GTTGGTAGAAGT-TCGAGCAACGGGCCTTCTCGAAGAC 1187
Query 1428 AATCCCTTGGCGGAGCTGATATTATTCCGAAACTGACATCAAATGGAT-TTTTCTCCAAG 1486
|| |||| || |||||||| | | ||| ||| | ||||||||||| | || | |||
Sbjct 1188 AAGCCCTCGGTGGAGCTGAAACAAGTCCAAAAATTACATCAAATGGCTCGTTGAT-TAAG 1246
Query 1487 AGGTCACCAAGTTCTCAGTTTAGATCTTTGAA-TGCTAGTACAAGCACAATATTGAAGCA 1545
|| |||||||||||||||| ||||| || || ||||||| ||||||| ||||||||||
Sbjct 1247 AGAACACCAAGTTCTCAGTTGAGATCATT-AACTGCTAGTGCAAGCACTGTATTGAAGCA 1305
Query 1546 TGCGAAAGGAACATCCAGATCATT--T---GAC-GGA--GG-CAGTAGATCTTTAGATAG 1596
||||||||||||||| |||||||| | ||| | || || ||||| | |||||
Sbjct 1306 TGCGAAAGGAACATCAAGATCATTGATGGGGACACCACTGGACACCAGATCACTGGATAG 1365
Query 1597 GAGTAAAGTACTAACAAACGAACCCAGATCGAAGTTTCCATTG-A--ACCAATCTTCTGA 1653
|| ||||| |||| ||| | ||| |||||||| ||| | ||| | |||||||||||||
Sbjct 1366 AAGCAAAGTGCTAATAAATGGACCAAGATCGAATTTTTCTTTGAACCACCAATCTTCTGA 1425
Query 1654 AGGAACAAGCGGAGGCGGGTCACCTAATTCAACAAAA---CAAGGAGATTCAGA-GA-AA 1708
|||||| ||| |||||| | | |||| |||| |||| ||| ||| |||| || ||
Sbjct 1426 AGGAACTAGCAGAGGCGAGACGCCTAGCTCAATAAAAGGGGAAGCAGAAGCAGATGACAA 1485
Query 1709 GCAGCAGGGACAAATAATGATAGTGT-CCCAGGAGTATTACATGATTTGCTTCA-AAAGG 1766
| || |||||||||||||| || |||| | || || | |||||||| || ||| |
Sbjct 1486 G--TCA---ACAAATAATGATAGCGTCCCCA-GTGTCTTGTACGATTTGCTGCAGAAA-G 1538
Query 1767 AGGTGATAACTTTAAGGAAAGCTGCTAATGATAAAGATCAAAGCCTTAGAGATAAAGACG 1826
|||| ||||| |||| |||||||| ||||||||||||| ||||| ||||| || ||||
Sbjct 1539 AGGTCATAACAATAAGAAAAGCTGCGCATGATAAAGATCAGAGCCTGAGAGACAAGGACG 1598
Query 1827 AAGCTATTGAGATGTTGGCCAAGAAGGTTGAAACACTAACAAAGGCGATGGAAGTGGAAG 1886
||||||||||||||||||||||||||||||||||| |||||||||||||||| || || |
Sbjct 1599 AAGCTATTGAGATGTTGGCCAAGAAGGTTGAAACATTAACAAAGGCGATGGATGTTGAGG 1658
Query 1887 CAAAGAAGATGCGAAGAGAAGTAGCAGCAATGGAGAAAGAGGTTTCAGCTATGCGTGTGG 1946
||||||||||||||||||||||||| | ||||| |||||| ||| | || |||||||| |
Sbjct 1659 CAAAGAAGATGCGAAGAGAAGTAGCTGTAATGGGGAAAGAAGTTGCTGCAATGCGTGTTG 1718
Query 1947 ATAACAAAGGAT--CA-GATAGTA-GAACGAGACGTCACTCTACTAACTCAAAAGGAGCT 2002
|||| | ||| || ||||||| || | ||||||| ||| | |||||| |||
Sbjct 1719 ATAA-A--GGACAGCAAGATAGTAAGACC-AGACGTCTCTCGG-T--CTCAAAGGGA--- 1768
Query 2003 TCAACAACTGCACAG-TTACTTTCTGGAAGCAGAGGCTCAGGACGAATGGGGATGACGAG 2061
|||| |||| || || ||||||||||| || | || |||||||| |||||||||||
Sbjct 1769 --AACA-CTGCTCAACTT-CTTTCTGGAAG-AGTGTCT--GGACGAATTGGGATGACGAG 1821
Query 2062 GAGCACGCAGTGATCAAA 2079
||||||||||||| ||||
Sbjct 1822 GAGCACGCAGTGA-CAAA 1838
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 88102736685
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5