BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G03460.1
Length=1280
Score E
Sequences producing significant alignments: (Bits) Value
Ahg484253 jgi|Araly1|484253|fgenesh2_kg.5__245__AT2G03460.1 1083 0.0
Ahg921494 jgi|Araly1|921494|scaffold_102775.1 257 1e-67
Ahg929436 jgi|Araly1|929436|scaffold_301893.1 252 6e-66
Ahg949864 jgi|Araly1|949864|scaffold_801751.1 207 1e-52
Ahg928901 jgi|Araly1|928901|scaffold_301358.1 185 6e-46
Ahg928652 jgi|Araly1|928652|scaffold_301109.1 124 1e-27
Ahg317684 jgi|Araly1|317684|fgenesh1_pm.C_scaffold_3000700 124 1e-27
Ahg333017 jgi|Araly1|333017|fgenesh1_pm.C_scaffold_9000045 84.2 2e-15
> Ahg484253 jgi|Araly1|484253|fgenesh2_kg.5__245__AT2G03460.1
Length=897
Score = 1083 bits (586), Expect = 0.0
Identities = 785/880 (89%), Gaps = 18/880 (2%)
Strand=Plus/Plus
Query 347 ACGAACACTACCTGGTTCACCCTCTGTCGGAAACCTGATCAAACCCTAACCAATGGCACC 406
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ACGAACACTAGCTGGTTCACCCTCTGTCGGAAACCTGATCAAACCCTAACCAATGGCACC 60
Query 407 A-TCAAGAAGTCAAGCGGGATCCAGCTACCTAGAGTCCTCTTCAAGCGTCTCCATTCTTG 465
| | ||||||||||| ||||||| ||||||||||||| || ||||||||||| |||| |
Sbjct 61 ACT-AAGAAGTCAAGTGGGATCCTGCTACCTAGAGTCTTCCTCAAGCGTCTCGGTTCTGG 119
Query 466 ATTGTCGGTCTCACACGTGGCGCGAGGCTCCAAGCTTGCGTGAGGGGCTATGTTCTGTTT 525
|||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct 120 ATTGTCGGTCTCACACGTGGCGCGAGGCTCCAAGCTTGCGGGAGGGGCTATGTTCGGTTT 179
Query 526 CTTCTAGTGTCCTTGATCGAAAGATATACGTAGCAGGAAGTTGCTTGGATGGTGATTCTT 585
|| |||||||| |||||||||||||||||||||||||| ||| | | ||||||||| |
Sbjct 180 CTGCTAGTGTCATTGATCGAAAGATATACGTAGCAGGACGTTCCATAGATGGTGATAAT- 238
Query 586 ACACCTATAAGAATTCGTTCGAGGTGTTTGACACTGAAACACAATTTTGGGATCCTGATA 645
| || | ||||||||| |||||||||| ||||||||||| ||| |||||||||| ||
Sbjct 239 A-AC-TCGAAGAATTCGGTCGAGGTGTTCGACACTGAAACCCAAATTTGGGATCCGGAGG 296
Query 646 CCATTACTTGCAGCAAGACGGAAGGCGATTTTTACGGATGCGGAACCGCATGCATTGACG 705
|||||||||||||| |||| ||||||||||||||| |||| |||| |||| ||||||
Sbjct 297 CCATTACTTGCAGCGAGACACAAGGCGATTTTTACGAATGCAAAACCACATGTATTGACA 356
Query 706 GAGAGTTCCATGTGGTGCCTGTAGGTCAAAAAAGAGAGGCGGTTGCTTACAATTCCAAGG 765
|| |||| ||||||||| || | ||||||||| ||| | |||||| |||||||||||||
Sbjct 357 GAAAGTTTCATGTGGTGACTCTCGGTCAAAAA-GAG-G-CGGTTGTTTACAATTCCAAGA 413
Query 766 AAGGTAGATGGGACATGGTTGGCC-AACAAATGGATCATTATAAGTTTTCAGCTTCTTGC 824
||||||||||||||| |||| | | || |||| ||||| |||||||||||||||| ||||
Sbjct 414 AAGGTAGATGGGACAGGGTTAGACGAA-AAATAGATCAGTATAAGTTTTCAGCTTATTGC 472
Query 825 GAGATACAGAATGTTTTGTACTCTTGTACTCATGGAGTGTTCAGATGGTATGACACTAAC 884
|||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 473 GAGATAGAGAATGTTTTGTACTCTGGTACTCATGGAGTGTTCAGATGGTATGACACTAAG 532
Query 885 GCAA-TGATGTGGAGAGATTTGAAGGGTTTGGTAGGACTACCT-ATGTTCGGTTCTGGTG 942
|||| | | ||||||||||||||| ||||||| |||||||||| | ||||||||||||||
Sbjct 533 GCAAGT-AGGTGGAGAGATTTGAAAGGTTTGGCAGGACTACCTGA-GTTCGGTTCTGGTG 590
Query 943 CCAATGTTAAGTTGGCTGATTATGGAGGAAA-ATTAACGGTTTTGTGGGAGGAGGAGTTG 1001
| ||| |||| ||||||| |||||| ||||| || | ||||||||||||||||||| |||
Sbjct 591 CGAATATTAAATTGGCTGGTTATGGTGGAAAGAT-AGCGGTTTTGTGGGAGGAGGATTTG 649
Query 1002 CCTTCTCGTGGACCTGATAGCGGCTATAAGAAGATGATTCGGTGTGCAGAGATTGCGCTT 1061
|||||| ||||||||||||||||||||||||||||||| |||||||||||||| || |||
Sbjct 650 CCTTCTTGTGGACCTGATAGCGGCTATAAGAAGATGATCCGGTGTGCAGAGATAGCTCTT 709
Query 1062 GAAAGGCGCAAAAGTTGTGAAATTTGGGGGATTGTTGAGTGGTTTGGTGATGTGCTTACC 1121
|||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||
Sbjct 710 GAAAGGCGCAAATGTCATGAAATTTGGGGGATTATTGAGTGGTTTGGTGATGTGCTTACC 769
Query 1122 GAACCTGTAGGATATGTTGTTTTGGAGAAGGTTCTTGATGTTACTCTTTGATGAAACTTG 1181
| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct 770 GTCCCTGTAGGATATGTTGTTTTGGAGAAGGTTCTTGCTGTTACTCTTTGATGAGCCTTG 829
Query 1182 AATGTGTTTTCTTTTGGAATACTTGTGTGTTCTTTTGGTG 1221
|||||||||||||||||||| ||| ||| | |||||||||
Sbjct 830 AATGTGTTTTCTTTTGGAATGCTTATGT-T-CTTTTGGTG 867
> Ahg921494 jgi|Araly1|921494|scaffold_102775.1
Length=1283
Score = 257 bits (139), Expect = 1e-67
Identities = 477/628 (76%), Gaps = 72/628 (11%)
Strand=Plus/Plus
Query 523 TTTCTTCTAGTGTCCTTGATCGAAAGATATACGTAGCAGGAAGTTGCT-TGGATGG-TGA 580
||||| |||| || ||||||| ||||||||| ||||||||| | || | |||||| | |
Sbjct 631 TTTCTGCTAGCGTACTTGATCAAAAGATATATGTAGCAGGATGCTG-TAAGGATGGCT-A 688
Query 581 TTCTTACACCTATAAGAA-TTCGTTCGAGGTGTTTGACACTGAA-ACACA-ATTTTGGGA 637
||| | |||||||||| || | | |||||||| ||||| || ||||| | ||||||
Sbjct 689 TTCGAATTCCTATAAGAACTT-GATGGAGGTGTTCGACAC-AAAGACACAGA-CTTGGGA 745
Query 638 TCCTGATA-CC-ATTACTTGCAGCAAGACGGAAGGC-GATTTTTACGGATGCGGAAC-C- 692
|||| | | || || |||||||| |||| ||| | |||| | ||| ||| |
Sbjct 746 TCCT-A-AGCCAATCCCTTGCAGCGAGACATTTGGCGGCCTTTT-C---TGC--AACACT 797
Query 693 GCATG-CATTGACGGAGAGTTCCATGTGGTGCCTGTAGGTCAAAAAAGA-GAGGCGGTTG 750
||||| | |||||||| ||||||| || || | || | | || || | |||||
Sbjct 798 GCATGTC-TTGACGGAAAGTTCCACGTAATG-C-GT--G------ACGACGATGTGGTTG 846
Query 751 CTTACAATTCCAAGGAAGGTAGATGGGACATG-GTTGGCCAACAAAT-GGATCAT-TATA 807
|||||||||||||||||||||||||||||| | |||| |||| || || | | ||||
Sbjct 847 CTTACAATTCCAAGGAAGGTAGATGGGACA-GAGTTGAAAAACAGATTGG-T-AGGTATA 903
Query 808 AGTT-TTCAG---CTT-CTTGCGAGATACAGAATGTTTTGTACTCTTGT-ACTCATGGAG 861
|| |||| ||| || |||||||||| ||||||||||||||||| | ||| |||
Sbjct 904 T-TTATTCAAAATCTTACT-GCGAGATACATAATGTTTTGTACTCTTGCGA-TCACGGAA 960
Query 862 -TGTTCAGAT-GGTATGACACTAACGCAAT-GATGTGGAGAGATTTGAAGGGTTTGGTAG 918
| | | | | ||||||||||| | |||| ||| |||||||| ||||||||||||||||
Sbjct 961 ATAT-C-GTTTGGTATGACACTGAGGCAAGAGAT-TGGAGAGAGTTGAAGGGTTTGGTAG 1017
Query 919 GACTACCT-ATGTTCGGTTCTGGTGCCAATGT--TAAG-TTGGCTGATTATGGAGGAAA- 973
|||||||| | |||| ||||| | || | |||| |||||||||||||| |||||
Sbjct 1018 GACTACCTGA-GTTCCCTTCTGATAAAAAAGGGATAAGATTGGCTGATTATGGTGGAAAG 1076
Query 974 ATTAACGGTTTTGTGGGAGGAGGAGTTGCCTTCTCGTGGACCTGATAGCGGC-TATAAGA 1032
|| ||||||||||| ||||||| ||||| | | | | || |||| | || ||
Sbjct 1077 ATGG-CGGTTTTGTGGCTCGAGGAGTGGCCTT-T--TA-ATTTT-TA-CGGCCT-TACGA 1128
Query 1033 AGATGATTCGGTGTGCAGAGATTGCGCTTGAAAGGCGCAAAAGTTGTGAAATTTGGGGGA 1092
|||||||| |||||||||||||| ||||||||| |||||||||| |||||||||||||||
Sbjct 1129 AGATGATTTGGTGTGCAGAGATTACGCTTGAAAAGCGCAAAAGTGGTGAAATTTGGGGGA 1188
Query 1093 TTGTTGAGTGGTTTGGTGATGTGCTTAC 1120
||||||||||||| | || |||||||
Sbjct 1189 AAGTTGAGTGGTTTGATCATTTGCTTAC 1216
> Ahg929436 jgi|Araly1|929436|scaffold_301893.1
Length=979
Score = 252 bits (136), Expect = 6e-66
Identities = 530/711 (75%), Gaps = 63/711 (9%)
Strand=Plus/Plus
Query 443 CTCTTCAAGCGTCTCCATTCTTGATTGTCGGTCTCACACGTGGCGCGAGGCTCCAAGCTT 502
||| || |||||||| |||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 161 CTCCTCGAGCGTCTCTGTTCTGGATTGCCGGTCTCACACGTGGCGCGAGGCTCCAAGCTT 220
Query 503 GC-G-TGAGGGGCTA-TGTTCTGTTTCTTCTAGTGTCCTTGATCGAAAGATATACGTAGC 559
|| | ||| | ||| | ||| | ||| |||| ||| ||||| |||||||||| || ||
Sbjct 221 GCCGGTGAAG--CTAAT-TTCACTCTCTGCTAGCGTCTTTGATAGAAAGATATATGTCGC 277
Query 560 AGGAAGTTGCTTGGATGGT-----GAT-TC--TTAC-ACC-TAT-AAGAATTCGTTCGAG 608
||| | || || ||| ||| || || | | | | |||| ||||| ||
Sbjct 278 AGGG-GCCGCAGGGC-GGTACAACGATGTCCGTTCCGATAATTTGAAGACCTCGTTGGAA 335
Query 609 GTGTTTGACACTGAAACACAATTTTGGGATCCTGATACCATTACTTGCAGCAAGACGGAA 668
||||| ||||| |||||||| |||||||||||| |||| ||||||| ||| ||
Sbjct 336 GTGTTCGACACAAAAACACAAACTTGGGATCCTGAGCCCATCCCTTGCAGTGAGATAAAA 395
Query 669 GGCGATTTTTACGGAT-GCGGAACCGCATGCATTGACGGAGAGTTCCATGTGGTGCCTGT 727
| | | |||| || || ||| | ||| ||||||||| |||||||||||| | |
Sbjct 396 GAC-AGCTTTA---ATTGCAGAAGCATATGGATTGACGGAAAGTTCCATGTGG--C--G- 446
Query 728 AGGTCAAAAAAGAGAGGCGGTTGCTTACAATTCCAAGGAAGGTAGATGGGACATGGTTGG 787
| ||| ||| || | |||||||||| |||||||||||||||||||||| |||||
Sbjct 447 AC-TCACAAA-GATTTGT--TTGCTTACAAATCCAAGGAAGGTAGATGGGACACGGTTGA 502
Query 788 -CCA--ACAA---ATGGATCATTATAAGTTTTCAGCTTCTT---GCGAGATACAGAATGT 838
||| ||| ||| |||||||| || ||||| ||||| || ||||| | |||||
Sbjct 503 ACCACGACAGGCGATGCATCATTATTTGTATTCAGATTCTTATTGCAAGATAGACAATGT 562
Query 839 TTTGTACTCTTG-TACTCATGGAGTGTTCAGATGGTATGACACTAACGCAA-TGATGTGG 896
| | |||||| | | || |||||| ||||||||||||||||||| || || | ||||||
Sbjct 563 TCTCTACTCT-GCTTCTGATGGAGCGTTCAGATGGTATGACACTGACATAAGT-ATGTGG 620
Query 897 AGAGATTTGA-AGGGTTTGGTAGG--ACTACCTATGTTCGGTTCTGGTGCCAATGTTAAG 953
||| ||||| ||| || | | | ||| || || |||| | ||| | | |
Sbjct 621 AGAAATTTGGTAGGACTTCCCAAGTTATTAC--ATCTT-GGTTATCGTGTTA--G--A-- 671
Query 954 TTGGCTGATTATGGAGGAAAATTAACGGTTTTGTGGGAGGAGGAGTTGCCTTCTCGT--- 1010
|||||||| ||||| ||||| || | ||||||||||| |||||| |||||| | |
Sbjct 672 TTGGCTGACTATGGCGGAAAGCTAGCTGTTTTGTGGGAAGAGGAGCTGCCTTATTATTCT 731
Query 1011 GG-ACCTGATAGCGGCTATAAGAAGATGATTCGGTGTGCAGAGATTGCGCTTGAAAGGCG 1069
|| || | | | ||||| ||||||||||| ||||||| |||||| |||||||||||||
Sbjct 732 GGGACTTC-TCTCCGCTATGAGAAGATGATTTGGTGTGCGGAGATTTCGCTTGAAAGGCG 790
Query 1070 CAAAAGTTGTGAAATTTGGGGGATTGTTGAGTGGTTTGGTGATGTGCTTAC 1120
||||||||| ||||||||||||| |||||||||||||| | || |||||||
Sbjct 791 CAAAAGTTGGGAAATTTGGGGGAATGTTGAGTGGTTTGATCATATGCTTAC 841
> Ahg949864 jgi|Araly1|949864|scaffold_801751.1
Length=1383
Score = 207 bits (112), Expect = 1e-52
Identities = 204/246 (83%), Gaps = 16/246 (7%)
Strand=Plus/Plus
Query 164 CTTCCCGATGATGTGCTAGTGAGCATCTTTGCACGCGTCTCAAGATTGTACTATCCGACT 223
|||||||||||| ||||| |||||||||| ||||| ||||||||||||||||| ||||||
Sbjct 251 CTTCCCGATGATTTGCTAATGAGCATCTTCGCACGTGTCTCAAGATTGTACTACCCGACT 310
Query 224 CTAAAT-C-TCGTCTCCAAGAGCTTTAGATGTCTCTTAGCTTCACCAGAGCTATACAAGG 281
|| | | | ||||||||||||||| ||| |||| || ||||||| ||||| || ||||
Sbjct 311 CT--CTCCTTAGTCTCCAAGAGCTTTCGATCTCTCCTAACTTCACCGGAGCTTTATAAGG 368
Query 282 TC-CGGTCACTCTTAGG-CAACACCGA--G-AGTTGTCTTTA-TGTGTGTTCACGGTTCC 335
| |||||||||| || ||| | ||| | ||||||| || | |||||| |||||| |
Sbjct 369 -CTCGGTCACTCTCGGGCCAA-AACGAGTGTTGTTGTCTCTACT-TGTGTTTACGGTT-C 424
Query 336 AAGATCGTCATACGAACACTACCTGGTTCACCCTCTGTCGGAAACCTGATCAAACCCTAA 395
||| | | || |||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct 425 AAG--CCTTATTCGAATTCCACCTGGTTCACCCTCTGTCGGAAACCTGATCAAACCCTAA 482
Query 396 CCAATG 401
||||||
Sbjct 483 CCAATG 488
> Ahg928901 jgi|Araly1|928901|scaffold_301358.1
Length=1293
Score = 185 bits (100), Expect = 6e-46
Identities = 197/242 (81%), Gaps = 14/242 (6%)
Strand=Plus/Plus
Query 164 CTTCCCGATGATGTGCTAGTGAGCATCTTTGCACGCGTCTCAAGATTGTACTATCCGACT 223
|||||||||||| || || ||| |||| | ||||||||| ||||||||||| ||||||||
Sbjct 191 CTTCCCGATGATTTGGTATTGAACATCGTCGCACGCGTCCCAAGATTGTACCATCCGACT 250
Query 224 CTAAATCTCGTCTCCAAGAGCTTTAGATGTCT-CTTAGCTTCACCAGAGCTATACAAGGT 282
||| |||||||||||||||||| ||| ||| | |||||||||| ||||| ||||||||
Sbjct 251 CTATCCCTCGTCTCCAAGAGCTTTCGATCTCTGC-TAGCTTCACCGGAGCTTTACAAGGT 309
Query 283 CCGGTCACTCTTAGGCAACACCGAGAGTTGTCTTTATGTGTGTTCACGGTTCCAAGATCG 342
| |||| ||| |||| || |||||||||||||| |||||||| || | ||| | |
Sbjct 310 CAGGTCTCTCATAGGAAAGACCGAGAGTTGTCTCTATGTGTG--CA----T-CAA-TTGG 361
Query 343 TCATAC-GAA-CACTAC-CTGGTTCACCCTCTGTCGGAAACCTGATCAAACCCTAACCAA 399
| | | ||| | | |||||||||||||| ||||||||||||||||||||||||||
Sbjct 362 T-TTCCTGAAGGTTTTCGTTGGTTCACCCTCTGCCGGAAACCTGATCAAACCCTAACCAA 420
Query 400 TG 401
||
Sbjct 421 TG 422
> Ahg928652 jgi|Araly1|928652|scaffold_301109.1
Length=512
Score = 124 bits (67), Expect = 1e-27
Identities = 226/300 (75%), Gaps = 21/300 (7%)
Strand=Plus/Plus
Query 817 CTTCTTGCGAGATACAGAATGTTTTGTACTCTTG-TACTCATGGAGTGTTCA-GATGGTA 874
||| ||| |||||| ||||||||||||||| ||| | |||| ||| | ||| | |||||
Sbjct 143 CTTATTGTGAGATAGAGAATGTTTTGTACT-TTGCTGCTCACAGAGCGCTCATG-TGGTA 200
Query 875 TGACACTAACGCAATGATGTGGAGAGATTTGAAGGGTTTGGTAGGACTACCTATGTTCGG 934
|||| | | | || | |||||||||||||||||||||||||||||||| | |||
Sbjct 201 TGACTTTCAGGTAAAAAACTGGAGAGATTTGAAGGGTTTGGTAGGACTACCCAAATTCCC 260
Query 935 TTCTGGT-GC-CA-ATGTTA-AGTTGGCTGATTATGGAGGAAA-ATTAACGGTTTTGTGG 989
| || | || || || | | | ||||| |||||||| ||||| || | || | |||||
Sbjct 261 TCCTC-TCGCTCAGAT-T-AGA-TTGGCAGATTATGGTGGAAAGAT-AGTGGCTATGTGG 315
Query 990 GAGGAGGA-GTTGCCTTCTCGTGGACCTGATAGCGGCTATAAGAAGATGA-TTCGGTGTG 1047
|| | | ||| | | | || || | | | ||||||||| || || || ||||||
Sbjct 316 GACGTTAATGTTTCATA-TGGTA-ACG-GTTC-CAGCTATAAGACGA-GAATTTGGTGTG 370
Query 1048 CAGAGATTGCGCTTGAAAGGCGCAAAAGTTGTGAAATTTGGGGGATTGTTGAGTGGTTTG 1107
| |||||| |||||||||| | ||| ||||||||||||||||||| ||||||||| |||
Sbjct 371 CGGAGATTTCGCTTGAAAGACTCAATAGTTGTGAAATTTGGGGGAAAGTTGAGTGGGTTG 430
> Ahg317684 jgi|Araly1|317684|fgenesh1_pm.C_scaffold_3000700
Length=1047
Score = 124 bits (67), Expect = 1e-27
Identities = 199/259 (77%), Gaps = 23/259 (9%)
Strand=Plus/Plus
Query 746 GGTTGCTTACAATTCCAAGGAAGGTAGATGGGACATGGTTGGCCAACAA---ATGGATCA 802
||||||||||||||||||||||||||||||||| | || ||| |||| |
Sbjct 618 GGTTGCTTACAATTCCAAGGAAGGTAGATGGGAT-TCCAAGG--AACTTGGGATGGGTGG 674
Query 803 TTATAAGTTTTCAGCTTCTT---GCGAGATACAGAATGTTTTGTACTCTTGTACTC--AT 857
|| || |||||||| ||||| |||||||| | || ||||||||||||| || || ||
Sbjct 675 TTTTATGTTTTCAGATTCTTATTGCGAGATAGATAACGTTTTGTACTCTT-TA-TCCGAT 732
Query 858 GGAGTGTTCAGATGGTATGACACTAACGCAAT-GATGTGGAGAGATTTGAAGGGTTTGGT 916
|||| ||||||||||||||||||| | | || || ||||| ||||||||| |||||| |
Sbjct 733 GGAGCGTTCAGATGGTATGACACTGAGGTAAGAGA-GTGGAAAGATTTGAATGGTTTGTT 791
Query 917 --AGGACTACCTATGTTCGGTTCTGGTGCCAATGTTA-AGTTGGCTGATTATGGAGGAAA 973
|| || |||| |||| | || |||| ||||| | |||||||||||||| |||||
Sbjct 792 TCAG--CTGCCTAAGTTCTCTGCTAGTGCTTGTGTTAGA-TTGGCTGATTATGGTGGAAA 848
Query 974 -ATTAACGGTTTTGTGGGA 991
|| |||| ||||||||
Sbjct 849 GATGG-CGGTCTTGTGGGA 866
> Ahg333017 jgi|Araly1|333017|fgenesh1_pm.C_scaffold_9000045
Length=1077
Score = 84.2 bits (45), Expect = 2e-15
Identities = 68/79 (86%), Gaps = 2/79 (3%)
Strand=Plus/Plus
Query 1042 GGTGTGCAGAGATTGCGCTTGAAAGGCGCAAAAGTTGT-GAAATTTGGGGGATTGTTGAG 1100
|||||||||||||||||||||||||||| | ||| | ||||||||||||| || |||
Sbjct 950 GGTGTGCAGAGATTGCGCTTGAAAGGCGTAGTAGT-GAAGAAATTTGGGGGAAGGTCGAG 1008
Query 1101 TGGTTTGGTGATGTGCTTA 1119
||||||| | |||||||||
Sbjct 1009 TGGTTTGATCATGTGCTTA 1027
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 47844260835
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5